HEADER SIGNALING PROTEIN 02-DEC-01 1KI1 TITLE GUANINE NUCLEOTIDE EXCHANGE REGION OF INTERSECTIN IN COMPLEX WITH TITLE 2 CDC42 COMPND MOL_ID: 1; COMPND 2 MOLECULE: G25K GTP-BINDING PROTEIN, PLACENTAL ISOFORM; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: RESIDUES 1-188; COMPND 5 SYNONYM: CDC42; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTERSECTIN LONG FORM; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: DBL HOMOLOGY AND PLECKSTRIN HOMOLOGY DOMAINS (RESIDUES COMPND 12 1229-1580); COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PROTEIN-PROTEIN COMPLEX, DH DOMAIN, PH DOMAIN, RHO GTPASE, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.T.SNYDER,W.M.PRUITT,C.J.DER,J.SONDEK REVDAT 4 14-FEB-24 1KI1 1 REMARK REVDAT 3 27-OCT-21 1KI1 1 REMARK SEQADV REVDAT 2 24-FEB-09 1KI1 1 VERSN REVDAT 1 29-MAY-02 1KI1 0 JRNL AUTH J.T.SNYDER,D.K.WORTHYLAKE,K.L.ROSSMAN,L.BETTS,W.M.PRUITT, JRNL AUTH 2 D.P.SIDEROVSKI,C.J.DER,J.SONDEK JRNL TITL STRUCTURAL BASIS FOR THE SELECTIVE ACTIVATION OF RHO GTPASES JRNL TITL 2 BY DBL EXCHANGE FACTORS. JRNL REF NAT.STRUCT.BIOL. V. 9 468 2002 JRNL REFN ISSN 1072-8368 JRNL PMID 12006984 JRNL DOI 10.1038/NSB796 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 61146 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 3085 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.50 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8374 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 181 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1KI1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-01. REMARK 100 THE DEPOSITION ID IS D_1000014985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787, 0.9792 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61357 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : 0.08300 REMARK 200 FOR THE DATA SET : 34.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23500 REMARK 200 R SYM FOR SHELL (I) : 0.25600 REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM SULFATE, TRIS, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.61500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 179 REMARK 465 PRO A 180 REMARK 465 GLU A 181 REMARK 465 PRO A 182 REMARK 465 LYS A 183 REMARK 465 LYS A 184 REMARK 465 SER A 185 REMARK 465 ARG A 186 REMARK 465 ARG A 187 REMARK 465 SER A 188 REMARK 465 LEU B 1496 REMARK 465 GLY B 1497 REMARK 465 SER B 1498 REMARK 465 SER B 1499 REMARK 465 GLY B 1500 REMARK 465 THR B 1501 REMARK 465 ASP B 1502 REMARK 465 GLU B 1536 REMARK 465 PRO B 1537 REMARK 465 ILE B 1538 REMARK 465 PRO C 179 REMARK 465 PRO C 180 REMARK 465 GLU C 181 REMARK 465 PRO C 182 REMARK 465 LYS C 183 REMARK 465 LYS C 184 REMARK 465 SER C 185 REMARK 465 ARG C 186 REMARK 465 ARG C 187 REMARK 465 SER C 188 REMARK 465 LEU D 1496 REMARK 465 GLY D 1497 REMARK 465 SER D 1498 REMARK 465 SER D 1499 REMARK 465 GLY D 1500 REMARK 465 THR D 1501 REMARK 465 ASP D 1502 REMARK 465 GLU D 1536 REMARK 465 PRO D 1537 REMARK 465 ILE D 1538 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B1361 CG CD OE1 OE2 REMARK 470 GLU D1361 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 1468 CD1 ILE B 1492 1.71 REMARK 500 NZ LYS D 1468 CD1 ILE D 1492 1.71 REMARK 500 OH TYR C 32 O GLY D 1240 2.13 REMARK 500 OH TYR A 32 O GLY B 1240 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE B1544 CA - CB - CG2 ANGL. DEV. = 13.2 DEGREES REMARK 500 ILE D1544 CA - CB - CG2 ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 29 97.83 -69.42 REMARK 500 GLU A 31 -83.88 -38.45 REMARK 500 TYR A 32 113.83 -165.91 REMARK 500 VAL A 33 114.21 -35.10 REMARK 500 LYS A 153 175.77 168.83 REMARK 500 VAL B1283 -120.47 39.56 REMARK 500 GLU B1308 -74.19 -33.67 REMARK 500 ILE B1315 -23.73 -140.87 REMARK 500 CYS B1442 59.23 -105.75 REMARK 500 GLU B1447 -22.84 -149.80 REMARK 500 GLN B1448 98.82 66.45 REMARK 500 CYS B1457 22.10 -155.70 REMARK 500 LYS B1468 -122.34 73.60 REMARK 500 LEU B1469 104.86 90.67 REMARK 500 ASN B1474 -121.84 64.72 REMARK 500 ASN B1475 -168.44 -122.78 REMARK 500 LYS B1476 -152.43 -119.38 REMARK 500 GLU B1477 69.64 62.34 REMARK 500 ILE B1492 94.77 -68.66 REMARK 500 VAL B1504 -56.80 27.71 REMARK 500 SER B1506 146.47 155.44 REMARK 500 SER B1509 166.76 -39.87 REMARK 500 ASN B1510 134.92 164.70 REMARK 500 TYR B1515 -119.03 -92.28 REMARK 500 LYS B1516 -151.97 -72.37 REMARK 500 THR B1530 -73.33 -63.75 REMARK 500 SER B1533 1.79 173.09 REMARK 500 ILE B1544 106.23 -14.67 REMARK 500 ALA B1552 -127.88 -82.48 REMARK 500 GLU B1553 -36.10 -145.48 REMARK 500 LYS B1577 23.36 -69.87 REMARK 500 LYS B1579 -169.74 -125.64 REMARK 500 PRO C 29 97.89 -69.38 REMARK 500 GLU C 31 -83.87 -38.52 REMARK 500 TYR C 32 113.83 -165.93 REMARK 500 VAL C 33 114.21 -35.16 REMARK 500 LYS C 153 175.73 168.90 REMARK 500 VAL D1283 -120.52 39.42 REMARK 500 GLU D1308 -74.11 -33.77 REMARK 500 ILE D1315 -23.68 -140.97 REMARK 500 CYS D1442 59.25 -105.68 REMARK 500 GLU D1447 -22.84 -149.80 REMARK 500 GLN D1448 98.88 66.39 REMARK 500 CYS D1457 21.96 -155.68 REMARK 500 LYS D1468 -122.40 73.61 REMARK 500 LEU D1469 104.89 90.67 REMARK 500 ASN D1474 -121.86 64.76 REMARK 500 ASN D1475 -168.44 -122.81 REMARK 500 LYS D1476 -152.43 -119.41 REMARK 500 GLU D1477 69.68 62.34 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 4002 DBREF 1KI1 A 1 188 UNP P60953 CDC42_HUMAN 1 188 DBREF 1KI1 C 1 188 UNP P60953 CDC42_HUMAN 1 188 DBREF 1KI1 B 1229 1580 UNP Q15811 ITSN1_HUMAN 1229 1581 DBREF 1KI1 D 1229 1580 UNP Q15811 ITSN1_HUMAN 1229 1581 SEQADV 1KI1 SER A 188 UNP P60953 CYS 188 ENGINEERED MUTATION SEQADV 1KI1 SER C 188 UNP P60953 CYS 188 ENGINEERED MUTATION SEQADV 1KI1 B UNP Q15811 LYS 1514 DELETION SEQADV 1KI1 D UNP Q15811 LYS 1514 DELETION SEQRES 1 A 188 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 A 188 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 A 188 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 A 188 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 A 188 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 A 188 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 A 188 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 A 188 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 A 188 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 A 188 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 A 188 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 A 188 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 A 188 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 A 188 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 A 188 LYS LYS SER ARG ARG SER SEQRES 1 B 352 ASP MET LEU THR PRO THR GLU ARG LYS ARG GLN GLY TYR SEQRES 2 B 352 ILE HIS GLU LEU ILE VAL THR GLU GLU ASN TYR VAL ASN SEQRES 3 B 352 ASP LEU GLN LEU VAL THR GLU ILE PHE GLN LYS PRO LEU SEQRES 4 B 352 MET GLU SER GLU LEU LEU THR GLU LYS GLU VAL ALA MET SEQRES 5 B 352 ILE PHE VAL ASN TRP LYS GLU LEU ILE MET CYS ASN ILE SEQRES 6 B 352 LYS LEU LEU LYS ALA LEU ARG VAL ARG LYS LYS MET SER SEQRES 7 B 352 GLY GLU LYS MET PRO VAL LYS MET ILE GLY ASP ILE LEU SEQRES 8 B 352 SER ALA GLN LEU PRO HIS MET GLN PRO TYR ILE ARG PHE SEQRES 9 B 352 CYS SER ARG GLN LEU ASN GLY ALA ALA LEU ILE GLN GLN SEQRES 10 B 352 LYS THR ASP GLU ALA PRO ASP PHE LYS GLU PHE VAL LYS SEQRES 11 B 352 ARG LEU GLU MET ASP PRO ARG CYS LYS GLY MET PRO LEU SEQRES 12 B 352 SER SER PHE ILE LEU LYS PRO MET GLN ARG VAL THR ARG SEQRES 13 B 352 TYR PRO LEU ILE ILE LYS ASN ILE LEU GLU ASN THR PRO SEQRES 14 B 352 GLU ASN HIS PRO ASP HIS SER HIS LEU LYS HIS ALA LEU SEQRES 15 B 352 GLU LYS ALA GLU GLU LEU CYS SER GLN VAL ASN GLU GLY SEQRES 16 B 352 VAL ARG GLU LYS GLU ASN SER ASP ARG LEU GLU TRP ILE SEQRES 17 B 352 GLN ALA HIS VAL GLN CYS GLU GLY LEU SER GLU GLN LEU SEQRES 18 B 352 VAL PHE ASN SER VAL THR ASN CYS LEU GLY PRO ARG LYS SEQRES 19 B 352 PHE LEU HIS SER GLY LYS LEU TYR LYS ALA LYS ASN ASN SEQRES 20 B 352 LYS GLU LEU TYR GLY PHE LEU PHE ASN ASP PHE LEU LEU SEQRES 21 B 352 LEU THR GLN ILE THR LYS PRO LEU GLY SER SER GLY THR SEQRES 22 B 352 ASP LYS VAL PHE SER PRO LYS SER ASN LEU GLN TYR MET SEQRES 23 B 352 TYR LYS THR PRO ILE PHE LEU ASN GLU VAL LEU VAL LYS SEQRES 24 B 352 LEU PRO THR ASP PRO SER GLY ASP GLU PRO ILE PHE HIS SEQRES 25 B 352 ILE SER HIS ILE ASP ARG VAL TYR THR LEU ARG ALA GLU SEQRES 26 B 352 SER ILE ASN GLU ARG THR ALA TRP VAL GLN LYS ILE LYS SEQRES 27 B 352 ALA ALA SER GLU LEU TYR ILE GLU THR GLU LYS LYS LYS SEQRES 28 B 352 ARG SEQRES 1 C 188 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 C 188 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 C 188 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 C 188 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 C 188 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 C 188 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 C 188 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 C 188 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 C 188 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 C 188 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 C 188 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 C 188 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 C 188 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 C 188 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 C 188 LYS LYS SER ARG ARG SER SEQRES 1 D 352 ASP MET LEU THR PRO THR GLU ARG LYS ARG GLN GLY TYR SEQRES 2 D 352 ILE HIS GLU LEU ILE VAL THR GLU GLU ASN TYR VAL ASN SEQRES 3 D 352 ASP LEU GLN LEU VAL THR GLU ILE PHE GLN LYS PRO LEU SEQRES 4 D 352 MET GLU SER GLU LEU LEU THR GLU LYS GLU VAL ALA MET SEQRES 5 D 352 ILE PHE VAL ASN TRP LYS GLU LEU ILE MET CYS ASN ILE SEQRES 6 D 352 LYS LEU LEU LYS ALA LEU ARG VAL ARG LYS LYS MET SER SEQRES 7 D 352 GLY GLU LYS MET PRO VAL LYS MET ILE GLY ASP ILE LEU SEQRES 8 D 352 SER ALA GLN LEU PRO HIS MET GLN PRO TYR ILE ARG PHE SEQRES 9 D 352 CYS SER ARG GLN LEU ASN GLY ALA ALA LEU ILE GLN GLN SEQRES 10 D 352 LYS THR ASP GLU ALA PRO ASP PHE LYS GLU PHE VAL LYS SEQRES 11 D 352 ARG LEU GLU MET ASP PRO ARG CYS LYS GLY MET PRO LEU SEQRES 12 D 352 SER SER PHE ILE LEU LYS PRO MET GLN ARG VAL THR ARG SEQRES 13 D 352 TYR PRO LEU ILE ILE LYS ASN ILE LEU GLU ASN THR PRO SEQRES 14 D 352 GLU ASN HIS PRO ASP HIS SER HIS LEU LYS HIS ALA LEU SEQRES 15 D 352 GLU LYS ALA GLU GLU LEU CYS SER GLN VAL ASN GLU GLY SEQRES 16 D 352 VAL ARG GLU LYS GLU ASN SER ASP ARG LEU GLU TRP ILE SEQRES 17 D 352 GLN ALA HIS VAL GLN CYS GLU GLY LEU SER GLU GLN LEU SEQRES 18 D 352 VAL PHE ASN SER VAL THR ASN CYS LEU GLY PRO ARG LYS SEQRES 19 D 352 PHE LEU HIS SER GLY LYS LEU TYR LYS ALA LYS ASN ASN SEQRES 20 D 352 LYS GLU LEU TYR GLY PHE LEU PHE ASN ASP PHE LEU LEU SEQRES 21 D 352 LEU THR GLN ILE THR LYS PRO LEU GLY SER SER GLY THR SEQRES 22 D 352 ASP LYS VAL PHE SER PRO LYS SER ASN LEU GLN TYR MET SEQRES 23 D 352 TYR LYS THR PRO ILE PHE LEU ASN GLU VAL LEU VAL LYS SEQRES 24 D 352 LEU PRO THR ASP PRO SER GLY ASP GLU PRO ILE PHE HIS SEQRES 25 D 352 ILE SER HIS ILE ASP ARG VAL TYR THR LEU ARG ALA GLU SEQRES 26 D 352 SER ILE ASN GLU ARG THR ALA TRP VAL GLN LYS ILE LYS SEQRES 27 D 352 ALA ALA SER GLU LEU TYR ILE GLU THR GLU LYS LYS LYS SEQRES 28 D 352 ARG HET SO4 A4001 5 HET SO4 C4002 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *181(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 LEU A 67 TYR A 72 5 6 HELIX 3 3 SER A 86 LYS A 96 1 11 HELIX 4 4 LYS A 96 CYS A 105 1 10 HELIX 5 5 GLN A 116 ARG A 120 5 5 HELIX 6 6 ASP A 122 LYS A 131 1 10 HELIX 7 7 THR A 138 LEU A 149 1 12 HELIX 8 8 GLY A 164 GLU A 178 1 15 HELIX 9 9 THR B 1232 PHE B 1263 1 32 HELIX 10 10 PHE B 1263 SER B 1270 1 8 HELIX 11 11 THR B 1274 VAL B 1283 1 10 HELIX 12 12 ASN B 1284 GLY B 1307 1 24 HELIX 13 13 ILE B 1315 LEU B 1323 1 9 HELIX 14 14 PRO B 1324 MET B 1326 5 3 HELIX 15 15 GLN B 1327 ALA B 1350 1 24 HELIX 16 16 ALA B 1350 MET B 1362 1 13 HELIX 17 17 ASP B 1363 LYS B 1367 5 5 HELIX 18 18 PRO B 1370 ILE B 1375 1 6 HELIX 19 19 LEU B 1376 GLU B 1394 1 19 HELIX 20 20 ASP B 1402 ALA B 1438 1 37 HELIX 21 21 SER B 1554 LYS B 1577 1 24 HELIX 22 22 GLY C 15 ASN C 26 1 12 HELIX 23 23 LEU C 67 TYR C 72 5 6 HELIX 24 24 SER C 86 LYS C 96 1 11 HELIX 25 25 LYS C 96 CYS C 105 1 10 HELIX 26 26 GLN C 116 ARG C 120 5 5 HELIX 27 27 ASP C 122 LYS C 131 1 10 HELIX 28 28 THR C 138 LEU C 149 1 12 HELIX 29 29 GLY C 164 GLU C 178 1 15 HELIX 30 30 THR D 1232 PHE D 1263 1 32 HELIX 31 31 PHE D 1263 SER D 1270 1 8 HELIX 32 32 THR D 1274 VAL D 1283 1 10 HELIX 33 33 ASN D 1284 GLY D 1307 1 24 HELIX 34 34 ILE D 1315 LEU D 1323 1 9 HELIX 35 35 PRO D 1324 MET D 1326 5 3 HELIX 36 36 GLN D 1327 ALA D 1350 1 24 HELIX 37 37 ALA D 1350 MET D 1362 1 13 HELIX 38 38 ASP D 1363 LYS D 1367 5 5 HELIX 39 39 PRO D 1370 ILE D 1375 1 6 HELIX 40 40 LEU D 1376 GLU D 1394 1 19 HELIX 41 41 ASP D 1402 ALA D 1438 1 37 HELIX 42 42 SER D 1554 LYS D 1577 1 24 SHEET 1 A 6 TYR A 40 ILE A 46 0 SHEET 2 A 6 GLU A 49 PHE A 56 -1 O LEU A 55 N TYR A 40 SHEET 3 A 6 THR A 3 GLY A 10 1 N ILE A 4 O GLY A 54 SHEET 4 A 6 VAL A 77 SER A 83 1 O CYS A 81 N VAL A 9 SHEET 5 A 6 PHE A 110 THR A 115 1 O VAL A 113 N VAL A 80 SHEET 6 A 6 LYS A 153 GLU A 156 1 O VAL A 155 N GLY A 114 SHEET 1 B 5 PHE B1463 SER B1466 0 SHEET 2 B 5 TYR B1479 PHE B1483 -1 O LEU B1482 N HIS B1465 SHEET 3 B 5 PHE B1486 THR B1493 -1 O LEU B1488 N PHE B1481 SHEET 4 B 5 LEU B1511 MET B1514 -1 O TYR B1513 N GLN B1491 SHEET 5 B 5 VAL B1440 GLN B1441 1 N GLN B1441 O GLN B1512 SHEET 1 C 4 PHE B1463 SER B1466 0 SHEET 2 C 4 TYR B1479 PHE B1483 -1 O LEU B1482 N HIS B1465 SHEET 3 C 4 PHE B1486 THR B1493 -1 O LEU B1488 N PHE B1481 SHEET 4 C 4 ILE B1519 PHE B1520 -1 O ILE B1519 N LEU B1487 SHEET 1 D 3 VAL B1524 LYS B1527 0 SHEET 2 D 3 HIS B1540 HIS B1543 -1 O HIS B1540 N LYS B1527 SHEET 3 D 3 ARG B1546 THR B1549 -1 O TYR B1548 N ILE B1541 SHEET 1 E 6 TYR C 40 ILE C 46 0 SHEET 2 E 6 GLU C 49 PHE C 56 -1 O LEU C 55 N TYR C 40 SHEET 3 E 6 THR C 3 GLY C 10 1 N ILE C 4 O GLY C 54 SHEET 4 E 6 VAL C 77 SER C 83 1 O CYS C 81 N VAL C 9 SHEET 5 E 6 PHE C 110 THR C 115 1 O VAL C 113 N VAL C 80 SHEET 6 E 6 LYS C 153 GLU C 156 1 O VAL C 155 N GLY C 114 SHEET 1 F 5 PHE D1463 SER D1466 0 SHEET 2 F 5 TYR D1479 PHE D1483 -1 O LEU D1482 N HIS D1465 SHEET 3 F 5 PHE D1486 THR D1493 -1 O LEU D1488 N PHE D1481 SHEET 4 F 5 LEU D1511 MET D1514 -1 O TYR D1513 N GLN D1491 SHEET 5 F 5 VAL D1440 GLN D1441 1 N GLN D1441 O GLN D1512 SHEET 1 G 4 PHE D1463 SER D1466 0 SHEET 2 G 4 TYR D1479 PHE D1483 -1 O LEU D1482 N HIS D1465 SHEET 3 G 4 PHE D1486 THR D1493 -1 O LEU D1488 N PHE D1481 SHEET 4 G 4 ILE D1519 PHE D1520 -1 O ILE D1519 N LEU D1487 SHEET 1 H 3 VAL D1524 LYS D1527 0 SHEET 2 H 3 HIS D1540 HIS D1543 -1 O HIS D1540 N LYS D1527 SHEET 3 H 3 ARG D1546 THR D1549 -1 O TYR D1548 N ILE D1541 SITE 1 AC1 9 ASP A 11 GLY A 12 ALA A 13 VAL A 14 SITE 2 AC1 9 GLY A 15 LYS A 16 THR A 17 HOH A4025 SITE 3 AC1 9 HOH A4037 SITE 1 AC2 8 ASP C 11 GLY C 12 ALA C 13 VAL C 14 SITE 2 AC2 8 GLY C 15 LYS C 16 THR C 17 HOH C4022 CRYST1 85.370 79.230 116.410 90.00 111.51 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011714 0.000000 0.004617 0.00000 SCALE2 0.000000 0.012621 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009233 0.00000