data_1KN3 # _entry.id 1KN3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KN3 pdb_00001kn3 10.2210/pdb1kn3/pdb RCSB RCSB015130 ? ? WWPDB D_1000015130 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BD9 'Human Phospatidylethanolamine-binding Protein (hPEBP)' unspecified PDB 1BEH 'Human PEBP in complex with Cacodylate' unspecified PDB 1A44 'Bovine Phospatidylethanolamine-binding Protein (bPEBP)' unspecified PDB 1QOU 'Antirrhinum Centroradialis (CEN) Protein' unspecified PDB 1FJJ 'E. Coli Ybhb Protein' unspecified PDB 1FUX 'E. Coli Ybcl Protein' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KN3 _pdbx_database_status.recvd_initial_deposition_date 2001-12-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Simister, P.C.' 1 'Banfield, M.J.' 2 'Brady, R.L.' 3 # _citation.id primary _citation.title 'The crystal structure of PEBP-2, a homologue of the PEBP/RKIP family.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 58 _citation.page_first 1077 _citation.page_last 1080 _citation.year 2002 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12037323 _citation.pdbx_database_id_DOI 10.1107/S090744490200522X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Simister, P.C.' 1 ? primary 'Banfield, M.J.' 2 ? primary 'Brady, R.L.' 3 ? # _cell.entry_id 1KN3 _cell.length_a 40.816 _cell.length_b 51.401 _cell.length_c 79.765 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1KN3 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Phosphatidylethanolamine Binding Protein-2' 20777.602 1 ? ? ? ? 2 water nat water 18.015 123 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name mPEBP-2 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSMWTGPLSLHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPVYREW HHFLVVNMKGNDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPV AGTCYQAEWDSYVPKLYKQLSGK ; _entity_poly.pdbx_seq_one_letter_code_can ;MSMWTGPLSLHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPVYREW HHFLVVNMKGNDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPV AGTCYQAEWDSYVPKLYKQLSGK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 MET n 1 4 TRP n 1 5 THR n 1 6 GLY n 1 7 PRO n 1 8 LEU n 1 9 SER n 1 10 LEU n 1 11 HIS n 1 12 GLU n 1 13 VAL n 1 14 ASP n 1 15 GLU n 1 16 GLN n 1 17 PRO n 1 18 GLN n 1 19 HIS n 1 20 LEU n 1 21 LEU n 1 22 ARG n 1 23 VAL n 1 24 THR n 1 25 TYR n 1 26 THR n 1 27 GLU n 1 28 ALA n 1 29 GLU n 1 30 VAL n 1 31 GLU n 1 32 GLU n 1 33 LEU n 1 34 GLY n 1 35 GLN n 1 36 VAL n 1 37 LEU n 1 38 THR n 1 39 PRO n 1 40 THR n 1 41 GLN n 1 42 VAL n 1 43 LYS n 1 44 HIS n 1 45 ARG n 1 46 PRO n 1 47 GLY n 1 48 SER n 1 49 ILE n 1 50 SER n 1 51 TRP n 1 52 ASP n 1 53 GLY n 1 54 LEU n 1 55 ASP n 1 56 PRO n 1 57 GLY n 1 58 LYS n 1 59 LEU n 1 60 TYR n 1 61 THR n 1 62 LEU n 1 63 ILE n 1 64 LEU n 1 65 THR n 1 66 ASP n 1 67 PRO n 1 68 ASP n 1 69 ALA n 1 70 PRO n 1 71 SER n 1 72 ARG n 1 73 LYS n 1 74 LYS n 1 75 PRO n 1 76 VAL n 1 77 TYR n 1 78 ARG n 1 79 GLU n 1 80 TRP n 1 81 HIS n 1 82 HIS n 1 83 PHE n 1 84 LEU n 1 85 VAL n 1 86 VAL n 1 87 ASN n 1 88 MET n 1 89 LYS n 1 90 GLY n 1 91 ASN n 1 92 ASP n 1 93 ILE n 1 94 SER n 1 95 SER n 1 96 GLY n 1 97 ASN n 1 98 VAL n 1 99 LEU n 1 100 SER n 1 101 ASP n 1 102 TYR n 1 103 VAL n 1 104 GLY n 1 105 SER n 1 106 GLY n 1 107 PRO n 1 108 PRO n 1 109 LYS n 1 110 GLY n 1 111 THR n 1 112 GLY n 1 113 LEU n 1 114 HIS n 1 115 ARG n 1 116 TYR n 1 117 VAL n 1 118 TRP n 1 119 LEU n 1 120 VAL n 1 121 TYR n 1 122 GLN n 1 123 GLN n 1 124 ASP n 1 125 LYS n 1 126 PRO n 1 127 LEU n 1 128 ARG n 1 129 CYS n 1 130 ASP n 1 131 GLU n 1 132 PRO n 1 133 ILE n 1 134 LEU n 1 135 THR n 1 136 ASN n 1 137 ARG n 1 138 SER n 1 139 GLY n 1 140 ASP n 1 141 HIS n 1 142 ARG n 1 143 GLY n 1 144 LYS n 1 145 PHE n 1 146 LYS n 1 147 THR n 1 148 ALA n 1 149 ALA n 1 150 PHE n 1 151 ARG n 1 152 LYS n 1 153 LYS n 1 154 TYR n 1 155 HIS n 1 156 LEU n 1 157 GLY n 1 158 ALA n 1 159 PRO n 1 160 VAL n 1 161 ALA n 1 162 GLY n 1 163 THR n 1 164 CYS n 1 165 TYR n 1 166 GLN n 1 167 ALA n 1 168 GLU n 1 169 TRP n 1 170 ASP n 1 171 SER n 1 172 TYR n 1 173 VAL n 1 174 PRO n 1 175 LYS n 1 176 LEU n 1 177 TYR n 1 178 LYS n 1 179 GLN n 1 180 LEU n 1 181 SER n 1 182 GLY n 1 183 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene pebp-2 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PEBP2_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSMWTGPLSLHEVDEQPQHLLRVTYTEAEVEELGQVLTPTQVKHRPGSISWDGLDPGKLYTLILTDPDAPSRKKPVYREW HHFLVVNMKGNDISSGNVLSDYVGSGPPKGTGLHRYVWLVYQQDKPLRCDEPILTNRSGDHRGKFKTAAFRKKYHLGAPV AGTCYQAEWDSYVPKLYKQLSGK ; _struct_ref.pdbx_align_begin 5 _struct_ref.pdbx_db_accession Q8VIN1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KN3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 183 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8VIN1 _struct_ref_seq.db_align_beg 5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 187 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 5 _struct_ref_seq.pdbx_auth_seq_align_end 187 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KN3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 38.87 _exptl_crystal.density_Matthews 2.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOUR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '30% PEG 4000, 200mM sodium acetate trihydrate, 100mM Tris.HCl, pH 8.5, VAPOUR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-02-18 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator MIRRORS _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.488 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SRS BEAMLINE PX14.1' _diffrn_source.pdbx_synchrotron_site SRS _diffrn_source.pdbx_synchrotron_beamline PX14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.488 # _reflns.entry_id 1KN3 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.8 _reflns.number_obs 15638 _reflns.number_all 16223 _reflns.percent_possible_obs 96.4 _reflns.pdbx_Rmerge_I_obs 0.0840000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 17.9 _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.88 _reflns_shell.percent_possible_all 92.4 _reflns_shell.Rmerge_I_obs 0.1160000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 8.5 _reflns_shell.pdbx_redundancy 3.26 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1KN3 _refine.ls_number_reflns_obs 14777 _refine.ls_number_reflns_all 14777 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 96.5 _refine.ls_R_factor_obs 0.2131500 _refine.ls_R_factor_all 0.2131500 _refine.ls_R_factor_R_work 0.2104300 _refine.ls_R_factor_R_free 0.2666700 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 801 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 13.7 _refine.aniso_B[1][1] -1.47 _refine.aniso_B[2][2] -0.52 _refine.aniso_B[3][3] 1.99 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1BD9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details Random _refine.pdbx_overall_ESU_R_Free 0.161 _refine.overall_SU_B 3.940 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc 0.926 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML 0.127 _refine.pdbx_overall_ESU_R 0.167 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1444 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 1567 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.021 ? 1484 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.448 1.947 ? 2023 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.201 3.000 ? 179 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.413 15.000 ? 256 'X-RAY DIFFRACTION' ? r_chiral_restr 0.105 0.200 ? 215 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 1143 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.233 0.300 ? 682 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.195 0.500 ? 168 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.269 0.300 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.337 0.500 ? 17 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.757 1.500 ? 901 'X-RAY DIFFRACTION' ? r_mcangle_it 1.135 2.000 ? 1462 'X-RAY DIFFRACTION' ? r_scbond_it 1.981 3.000 ? 583 'X-RAY DIFFRACTION' ? r_scangle_it 3.080 4.500 ? 561 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.923 _refine_ls_shell.number_reflns_R_work 2561 _refine_ls_shell.R_factor_R_work 0.2210000 _refine_ls_shell.percent_reflns_obs 94.5 _refine_ls_shell.R_factor_R_free 0.2430000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 139 _refine_ls_shell.number_reflns_obs 2561 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1KN3 _struct.title 'Murine PEBP-2 (phosphatidylethanolamine-binding protein-2)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KN3 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Phosphatidylethanolamine binding, Raf-1 kinase inhibitor, Cis-peptide, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 9 ? VAL A 13 ? SER A 13 VAL A 17 5 ? 5 HELX_P HELX_P2 2 THR A 38 ? LYS A 43 ? THR A 42 LYS A 47 5 ? 6 HELX_P HELX_P3 3 ASP A 92 ? GLY A 96 ? ASP A 96 GLY A 100 5 ? 5 HELX_P HELX_P4 4 LYS A 146 ? TYR A 154 ? LYS A 150 TYR A 158 1 ? 9 HELX_P HELX_P5 5 TYR A 172 ? LEU A 180 ? TYR A 176 LEU A 184 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 69 A . ? ALA 73 A PRO 70 A ? PRO 74 A 1 -1.99 2 ARG 78 A . ? ARG 82 A GLU 79 A ? GLU 83 A 1 -8.61 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN A 97 ? SER A 100 ? ASN A 101 SER A 104 A 2 TRP A 80 ? LYS A 89 ? TRP A 84 LYS A 93 A 3 LEU A 59 ? ASP A 66 ? LEU A 63 ASP A 70 A 4 HIS A 114 ? GLN A 122 ? HIS A 118 GLN A 126 A 5 ALA A 161 ? ALA A 167 ? ALA A 165 ALA A 171 A 6 HIS A 19 ? LEU A 20 ? HIS A 23 LEU A 24 B 1 ASN A 97 ? SER A 100 ? ASN A 101 SER A 104 B 2 TRP A 80 ? LYS A 89 ? TRP A 84 LYS A 93 B 3 LEU A 59 ? ASP A 66 ? LEU A 63 ASP A 70 B 4 HIS A 114 ? GLN A 122 ? HIS A 118 GLN A 126 B 5 ALA A 161 ? ALA A 167 ? ALA A 165 ALA A 171 B 6 GLN A 35 ? VAL A 36 ? GLN A 39 VAL A 40 C 1 ALA A 28 ? VAL A 30 ? ALA A 32 VAL A 34 C 2 ARG A 22 ? TYR A 25 ? ARG A 26 TYR A 29 C 3 SER A 48 ? SER A 50 ? SER A 52 SER A 54 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN A 97 ? O ASN A 101 N VAL A 86 ? N VAL A 90 A 2 3 O VAL A 85 ? O VAL A 89 N LEU A 62 ? N LEU A 66 A 3 4 N THR A 65 ? N THR A 69 O VAL A 117 ? O VAL A 121 A 4 5 N TYR A 116 ? N TYR A 120 O TYR A 165 ? O TYR A 169 A 5 6 O GLY A 162 ? O GLY A 166 N HIS A 19 ? N HIS A 23 B 1 2 O ASN A 97 ? O ASN A 101 N VAL A 86 ? N VAL A 90 B 2 3 O VAL A 85 ? O VAL A 89 N LEU A 62 ? N LEU A 66 B 3 4 N THR A 65 ? N THR A 69 O VAL A 117 ? O VAL A 121 B 4 5 N TYR A 116 ? N TYR A 120 O TYR A 165 ? O TYR A 169 B 5 6 O GLN A 166 ? O GLN A 170 N GLN A 35 ? N GLN A 39 C 1 2 O ALA A 28 ? O ALA A 32 N TYR A 25 ? N TYR A 29 C 2 3 N ARG A 22 ? N ARG A 26 O SER A 50 ? O SER A 54 # _database_PDB_matrix.entry_id 1KN3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KN3 _atom_sites.fract_transf_matrix[1][1] 0.024500 _atom_sites.fract_transf_matrix[1][2] -0.000001 _atom_sites.fract_transf_matrix[1][3] -0.000001 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019455 _atom_sites.fract_transf_matrix[2][3] -0.000001 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012537 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 5 ? ? ? A . n A 1 2 SER 2 6 6 SER SER A . n A 1 3 MET 3 7 7 MET MET A . n A 1 4 TRP 4 8 8 TRP TRP A . n A 1 5 THR 5 9 9 THR THR A . n A 1 6 GLY 6 10 10 GLY GLY A . n A 1 7 PRO 7 11 11 PRO PRO A . n A 1 8 LEU 8 12 12 LEU LEU A . n A 1 9 SER 9 13 13 SER SER A . n A 1 10 LEU 10 14 14 LEU LEU A . n A 1 11 HIS 11 15 15 HIS HIS A . n A 1 12 GLU 12 16 16 GLU GLU A . n A 1 13 VAL 13 17 17 VAL VAL A . n A 1 14 ASP 14 18 18 ASP ASP A . n A 1 15 GLU 15 19 19 GLU GLU A . n A 1 16 GLN 16 20 20 GLN GLN A . n A 1 17 PRO 17 21 21 PRO PRO A . n A 1 18 GLN 18 22 22 GLN GLN A . n A 1 19 HIS 19 23 23 HIS HIS A . n A 1 20 LEU 20 24 24 LEU LEU A . n A 1 21 LEU 21 25 25 LEU LEU A . n A 1 22 ARG 22 26 26 ARG ARG A . n A 1 23 VAL 23 27 27 VAL VAL A . n A 1 24 THR 24 28 28 THR THR A . n A 1 25 TYR 25 29 29 TYR TYR A . n A 1 26 THR 26 30 30 THR THR A . n A 1 27 GLU 27 31 31 GLU GLU A . n A 1 28 ALA 28 32 32 ALA ALA A . n A 1 29 GLU 29 33 33 GLU GLU A . n A 1 30 VAL 30 34 34 VAL VAL A . n A 1 31 GLU 31 35 35 GLU GLU A . n A 1 32 GLU 32 36 36 GLU GLU A . n A 1 33 LEU 33 37 37 LEU LEU A . n A 1 34 GLY 34 38 38 GLY GLY A . n A 1 35 GLN 35 39 39 GLN GLN A . n A 1 36 VAL 36 40 40 VAL VAL A . n A 1 37 LEU 37 41 41 LEU LEU A . n A 1 38 THR 38 42 42 THR THR A . n A 1 39 PRO 39 43 43 PRO PRO A . n A 1 40 THR 40 44 44 THR THR A . n A 1 41 GLN 41 45 45 GLN GLN A . n A 1 42 VAL 42 46 46 VAL VAL A . n A 1 43 LYS 43 47 47 LYS LYS A . n A 1 44 HIS 44 48 48 HIS HIS A . n A 1 45 ARG 45 49 49 ARG ARG A . n A 1 46 PRO 46 50 50 PRO PRO A . n A 1 47 GLY 47 51 51 GLY GLY A . n A 1 48 SER 48 52 52 SER SER A . n A 1 49 ILE 49 53 53 ILE ILE A . n A 1 50 SER 50 54 54 SER SER A . n A 1 51 TRP 51 55 55 TRP TRP A . n A 1 52 ASP 52 56 56 ASP ASP A . n A 1 53 GLY 53 57 57 GLY GLY A . n A 1 54 LEU 54 58 58 LEU LEU A . n A 1 55 ASP 55 59 59 ASP ASP A . n A 1 56 PRO 56 60 60 PRO PRO A . n A 1 57 GLY 57 61 61 GLY GLY A . n A 1 58 LYS 58 62 62 LYS LYS A . n A 1 59 LEU 59 63 63 LEU LEU A . n A 1 60 TYR 60 64 64 TYR TYR A . n A 1 61 THR 61 65 65 THR THR A . n A 1 62 LEU 62 66 66 LEU LEU A . n A 1 63 ILE 63 67 67 ILE ILE A . n A 1 64 LEU 64 68 68 LEU LEU A . n A 1 65 THR 65 69 69 THR THR A . n A 1 66 ASP 66 70 70 ASP ASP A . n A 1 67 PRO 67 71 71 PRO PRO A . n A 1 68 ASP 68 72 72 ASP ASP A . n A 1 69 ALA 69 73 73 ALA ALA A . n A 1 70 PRO 70 74 74 PRO PRO A . n A 1 71 SER 71 75 75 SER SER A . n A 1 72 ARG 72 76 76 ARG ARG A . n A 1 73 LYS 73 77 77 LYS LYS A . n A 1 74 LYS 74 78 78 LYS LYS A . n A 1 75 PRO 75 79 79 PRO PRO A . n A 1 76 VAL 76 80 80 VAL VAL A . n A 1 77 TYR 77 81 81 TYR TYR A . n A 1 78 ARG 78 82 82 ARG ARG A . n A 1 79 GLU 79 83 83 GLU GLU A . n A 1 80 TRP 80 84 84 TRP TRP A . n A 1 81 HIS 81 85 85 HIS HIS A . n A 1 82 HIS 82 86 86 HIS HIS A . n A 1 83 PHE 83 87 87 PHE PHE A . n A 1 84 LEU 84 88 88 LEU LEU A . n A 1 85 VAL 85 89 89 VAL VAL A . n A 1 86 VAL 86 90 90 VAL VAL A . n A 1 87 ASN 87 91 91 ASN ASN A . n A 1 88 MET 88 92 92 MET MET A . n A 1 89 LYS 89 93 93 LYS LYS A . n A 1 90 GLY 90 94 94 GLY GLY A . n A 1 91 ASN 91 95 95 ASN ASN A . n A 1 92 ASP 92 96 96 ASP ASP A . n A 1 93 ILE 93 97 97 ILE ILE A . n A 1 94 SER 94 98 98 SER SER A . n A 1 95 SER 95 99 99 SER SER A . n A 1 96 GLY 96 100 100 GLY GLY A . n A 1 97 ASN 97 101 101 ASN ASN A . n A 1 98 VAL 98 102 102 VAL VAL A . n A 1 99 LEU 99 103 103 LEU LEU A . n A 1 100 SER 100 104 104 SER SER A . n A 1 101 ASP 101 105 105 ASP ASP A . n A 1 102 TYR 102 106 106 TYR TYR A . n A 1 103 VAL 103 107 107 VAL VAL A . n A 1 104 GLY 104 108 108 GLY GLY A . n A 1 105 SER 105 109 109 SER SER A . n A 1 106 GLY 106 110 110 GLY GLY A . n A 1 107 PRO 107 111 111 PRO PRO A . n A 1 108 PRO 108 112 112 PRO PRO A . n A 1 109 LYS 109 113 113 LYS LYS A . n A 1 110 GLY 110 114 114 GLY GLY A . n A 1 111 THR 111 115 115 THR THR A . n A 1 112 GLY 112 116 116 GLY GLY A . n A 1 113 LEU 113 117 117 LEU LEU A . n A 1 114 HIS 114 118 118 HIS HIS A . n A 1 115 ARG 115 119 119 ARG ARG A . n A 1 116 TYR 116 120 120 TYR TYR A . n A 1 117 VAL 117 121 121 VAL VAL A . n A 1 118 TRP 118 122 122 TRP TRP A . n A 1 119 LEU 119 123 123 LEU LEU A . n A 1 120 VAL 120 124 124 VAL VAL A . n A 1 121 TYR 121 125 125 TYR TYR A . n A 1 122 GLN 122 126 126 GLN GLN A . n A 1 123 GLN 123 127 127 GLN GLN A . n A 1 124 ASP 124 128 128 ASP ASP A . n A 1 125 LYS 125 129 129 LYS LYS A . n A 1 126 PRO 126 130 130 PRO PRO A . n A 1 127 LEU 127 131 131 LEU LEU A . n A 1 128 ARG 128 132 132 ARG ARG A . n A 1 129 CYS 129 133 133 CYS CYS A . n A 1 130 ASP 130 134 134 ASP ASP A . n A 1 131 GLU 131 135 135 GLU GLU A . n A 1 132 PRO 132 136 136 PRO PRO A . n A 1 133 ILE 133 137 137 ILE ILE A . n A 1 134 LEU 134 138 138 LEU LEU A . n A 1 135 THR 135 139 139 THR THR A . n A 1 136 ASN 136 140 140 ASN ASN A . n A 1 137 ARG 137 141 141 ARG ARG A . n A 1 138 SER 138 142 142 SER SER A . n A 1 139 GLY 139 143 143 GLY GLY A . n A 1 140 ASP 140 144 144 ASP ASP A . n A 1 141 HIS 141 145 145 HIS HIS A . n A 1 142 ARG 142 146 146 ARG ARG A . n A 1 143 GLY 143 147 147 GLY GLY A . n A 1 144 LYS 144 148 148 LYS LYS A . n A 1 145 PHE 145 149 149 PHE PHE A . n A 1 146 LYS 146 150 150 LYS LYS A . n A 1 147 THR 147 151 151 THR THR A . n A 1 148 ALA 148 152 152 ALA ALA A . n A 1 149 ALA 149 153 153 ALA ALA A . n A 1 150 PHE 150 154 154 PHE PHE A . n A 1 151 ARG 151 155 155 ARG ARG A . n A 1 152 LYS 152 156 156 LYS LYS A . n A 1 153 LYS 153 157 157 LYS LYS A . n A 1 154 TYR 154 158 158 TYR TYR A . n A 1 155 HIS 155 159 159 HIS HIS A . n A 1 156 LEU 156 160 160 LEU LEU A . n A 1 157 GLY 157 161 161 GLY GLY A . n A 1 158 ALA 158 162 162 ALA ALA A . n A 1 159 PRO 159 163 163 PRO PRO A . n A 1 160 VAL 160 164 164 VAL VAL A . n A 1 161 ALA 161 165 165 ALA ALA A . n A 1 162 GLY 162 166 166 GLY GLY A . n A 1 163 THR 163 167 167 THR THR A . n A 1 164 CYS 164 168 168 CYS CYS A . n A 1 165 TYR 165 169 169 TYR TYR A . n A 1 166 GLN 166 170 170 GLN GLN A . n A 1 167 ALA 167 171 171 ALA ALA A . n A 1 168 GLU 168 172 172 GLU GLU A . n A 1 169 TRP 169 173 173 TRP TRP A . n A 1 170 ASP 170 174 174 ASP ASP A . n A 1 171 SER 171 175 175 SER SER A . n A 1 172 TYR 172 176 176 TYR TYR A . n A 1 173 VAL 173 177 177 VAL VAL A . n A 1 174 PRO 174 178 178 PRO PRO A . n A 1 175 LYS 175 179 179 LYS LYS A . n A 1 176 LEU 176 180 180 LEU LEU A . n A 1 177 TYR 177 181 181 TYR TYR A . n A 1 178 LYS 178 182 182 LYS LYS A . n A 1 179 GLN 179 183 183 GLN GLN A . n A 1 180 LEU 180 184 184 LEU LEU A . n A 1 181 SER 181 185 185 SER SER A . n A 1 182 GLY 182 186 ? ? ? A . n A 1 183 LYS 183 187 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 188 1 HOH HOH A . B 2 HOH 2 189 2 HOH HOH A . B 2 HOH 3 190 3 HOH HOH A . B 2 HOH 4 191 4 HOH HOH A . B 2 HOH 5 192 5 HOH HOH A . B 2 HOH 6 193 6 HOH HOH A . B 2 HOH 7 194 7 HOH HOH A . B 2 HOH 8 195 8 HOH HOH A . B 2 HOH 9 196 9 HOH HOH A . B 2 HOH 10 197 10 HOH HOH A . B 2 HOH 11 198 11 HOH HOH A . B 2 HOH 12 199 12 HOH HOH A . B 2 HOH 13 200 13 HOH HOH A . B 2 HOH 14 201 14 HOH HOH A . B 2 HOH 15 202 15 HOH HOH A . B 2 HOH 16 203 16 HOH HOH A . B 2 HOH 17 204 17 HOH HOH A . B 2 HOH 18 205 18 HOH HOH A . B 2 HOH 19 206 19 HOH HOH A . B 2 HOH 20 207 20 HOH HOH A . B 2 HOH 21 208 21 HOH HOH A . B 2 HOH 22 209 22 HOH HOH A . B 2 HOH 23 210 23 HOH HOH A . B 2 HOH 24 211 24 HOH HOH A . B 2 HOH 25 212 26 HOH HOH A . B 2 HOH 26 213 27 HOH HOH A . B 2 HOH 27 214 28 HOH HOH A . B 2 HOH 28 215 29 HOH HOH A . B 2 HOH 29 216 30 HOH HOH A . B 2 HOH 30 217 31 HOH HOH A . B 2 HOH 31 218 32 HOH HOH A . B 2 HOH 32 219 33 HOH HOH A . B 2 HOH 33 220 34 HOH HOH A . B 2 HOH 34 221 35 HOH HOH A . B 2 HOH 35 222 36 HOH HOH A . B 2 HOH 36 223 37 HOH HOH A . B 2 HOH 37 224 38 HOH HOH A . B 2 HOH 38 225 39 HOH HOH A . B 2 HOH 39 226 40 HOH HOH A . B 2 HOH 40 227 41 HOH HOH A . B 2 HOH 41 228 42 HOH HOH A . B 2 HOH 42 229 43 HOH HOH A . B 2 HOH 43 230 44 HOH HOH A . B 2 HOH 44 231 45 HOH HOH A . B 2 HOH 45 232 46 HOH HOH A . B 2 HOH 46 233 47 HOH HOH A . B 2 HOH 47 234 48 HOH HOH A . B 2 HOH 48 235 49 HOH HOH A . B 2 HOH 49 236 50 HOH HOH A . B 2 HOH 50 237 51 HOH HOH A . B 2 HOH 51 238 52 HOH HOH A . B 2 HOH 52 239 53 HOH HOH A . B 2 HOH 53 240 54 HOH HOH A . B 2 HOH 54 241 55 HOH HOH A . B 2 HOH 55 242 56 HOH HOH A . B 2 HOH 56 243 57 HOH HOH A . B 2 HOH 57 244 58 HOH HOH A . B 2 HOH 58 245 59 HOH HOH A . B 2 HOH 59 246 60 HOH HOH A . B 2 HOH 60 247 61 HOH HOH A . B 2 HOH 61 248 62 HOH HOH A . B 2 HOH 62 249 63 HOH HOH A . B 2 HOH 63 250 64 HOH HOH A . B 2 HOH 64 251 65 HOH HOH A . B 2 HOH 65 252 66 HOH HOH A . B 2 HOH 66 253 67 HOH HOH A . B 2 HOH 67 254 68 HOH HOH A . B 2 HOH 68 255 69 HOH HOH A . B 2 HOH 69 256 70 HOH HOH A . B 2 HOH 70 257 71 HOH HOH A . B 2 HOH 71 258 72 HOH HOH A . B 2 HOH 72 259 73 HOH HOH A . B 2 HOH 73 260 74 HOH HOH A . B 2 HOH 74 261 75 HOH HOH A . B 2 HOH 75 262 76 HOH HOH A . B 2 HOH 76 263 77 HOH HOH A . B 2 HOH 77 264 78 HOH HOH A . B 2 HOH 78 265 79 HOH HOH A . B 2 HOH 79 266 80 HOH HOH A . B 2 HOH 80 267 81 HOH HOH A . B 2 HOH 81 268 82 HOH HOH A . B 2 HOH 82 269 83 HOH HOH A . B 2 HOH 83 270 84 HOH HOH A . B 2 HOH 84 271 85 HOH HOH A . B 2 HOH 85 272 86 HOH HOH A . B 2 HOH 86 273 87 HOH HOH A . B 2 HOH 87 274 88 HOH HOH A . B 2 HOH 88 275 89 HOH HOH A . B 2 HOH 89 276 90 HOH HOH A . B 2 HOH 90 277 91 HOH HOH A . B 2 HOH 91 278 92 HOH HOH A . B 2 HOH 92 279 93 HOH HOH A . B 2 HOH 93 280 94 HOH HOH A . B 2 HOH 94 281 95 HOH HOH A . B 2 HOH 95 282 96 HOH HOH A . B 2 HOH 96 283 97 HOH HOH A . B 2 HOH 97 284 98 HOH HOH A . B 2 HOH 98 285 99 HOH HOH A . B 2 HOH 99 286 100 HOH HOH A . B 2 HOH 100 287 101 HOH HOH A . B 2 HOH 101 288 102 HOH HOH A . B 2 HOH 102 289 103 HOH HOH A . B 2 HOH 103 290 104 HOH HOH A . B 2 HOH 104 291 105 HOH HOH A . B 2 HOH 105 292 106 HOH HOH A . B 2 HOH 106 293 107 HOH HOH A . B 2 HOH 107 294 108 HOH HOH A . B 2 HOH 108 295 109 HOH HOH A . B 2 HOH 109 296 110 HOH HOH A . B 2 HOH 110 297 111 HOH HOH A . B 2 HOH 111 298 112 HOH HOH A . B 2 HOH 112 299 113 HOH HOH A . B 2 HOH 113 300 114 HOH HOH A . B 2 HOH 114 301 115 HOH HOH A . B 2 HOH 115 302 116 HOH HOH A . B 2 HOH 116 303 117 HOH HOH A . B 2 HOH 117 304 118 HOH HOH A . B 2 HOH 118 305 119 HOH HOH A . B 2 HOH 119 306 120 HOH HOH A . B 2 HOH 120 307 121 HOH HOH A . B 2 HOH 121 308 122 HOH HOH A . B 2 HOH 122 309 123 HOH HOH A . B 2 HOH 123 310 124 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-06-12 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 10.3695 _pdbx_refine_tls.origin_y 22.7567 _pdbx_refine_tls.origin_z 11.8122 _pdbx_refine_tls.T[1][1] 0.0545 _pdbx_refine_tls.T[2][2] 0.0498 _pdbx_refine_tls.T[3][3] 0.0169 _pdbx_refine_tls.T[1][2] 0.0212 _pdbx_refine_tls.T[1][3] -0.0282 _pdbx_refine_tls.T[2][3] -0.0206 _pdbx_refine_tls.L[1][1] 2.2223 _pdbx_refine_tls.L[2][2] 2.8388 _pdbx_refine_tls.L[3][3] 1.4450 _pdbx_refine_tls.L[1][2] -0.3801 _pdbx_refine_tls.L[1][3] 0.1449 _pdbx_refine_tls.L[2][3] 0.2890 _pdbx_refine_tls.S[1][1] 0.0871 _pdbx_refine_tls.S[1][2] 0.1771 _pdbx_refine_tls.S[1][3] -0.0747 _pdbx_refine_tls.S[2][1] -0.2599 _pdbx_refine_tls.S[2][2] -0.1300 _pdbx_refine_tls.S[2][3] 0.2094 _pdbx_refine_tls.S[3][1] -0.0336 _pdbx_refine_tls.S[3][2] -0.1396 _pdbx_refine_tls.S[3][3] 0.0429 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 2 _pdbx_refine_tls_group.beg_auth_seq_id 6 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 181 _pdbx_refine_tls_group.end_auth_seq_id 185 _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 REFMAC refinement 5.0 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 182 ? ? O A HOH 227 ? ? 1.92 2 1 NE2 A GLN 20 ? ? O A HOH 308 ? ? 1.94 3 1 O A HOH 269 ? ? O A HOH 299 ? ? 1.96 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NZ _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 LYS _pdbx_validate_symm_contact.auth_seq_id_1 150 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 214 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_655 _pdbx_validate_symm_contact.dist 1.97 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CD _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 LYS _pdbx_validate_rmsd_bond.auth_seq_id_1 47 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 LYS _pdbx_validate_rmsd_bond.auth_seq_id_2 47 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.267 _pdbx_validate_rmsd_bond.bond_target_value 1.508 _pdbx_validate_rmsd_bond.bond_deviation -0.241 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.025 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CG A LYS 47 ? ? CD A LYS 47 ? ? CE A LYS 47 ? ? 134.99 111.90 23.09 3.00 N 2 1 CB A ASP 72 ? ? CG A ASP 72 ? ? OD2 A ASP 72 ? ? 125.12 118.30 6.82 0.90 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A LYS 47 ? CE ? A LYS 43 CE 2 1 Y 0 A LYS 47 ? NZ ? A LYS 43 NZ 3 1 Y 0 A LYS 93 ? CE ? A LYS 89 CE 4 1 Y 0 A LYS 93 ? NZ ? A LYS 89 NZ 5 1 Y 0 A ARG 132 ? NE ? A ARG 128 NE 6 1 Y 0 A ARG 132 ? CZ ? A ARG 128 CZ 7 1 Y 0 A ARG 132 ? NH1 ? A ARG 128 NH1 8 1 Y 0 A ARG 132 ? NH2 ? A ARG 128 NH2 9 1 Y 0 A LYS 179 ? CE ? A LYS 175 CE 10 1 Y 0 A LYS 179 ? NZ ? A LYS 175 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 5 ? A MET 1 2 1 Y 1 A GLY 186 ? A GLY 182 3 1 Y 1 A LYS 187 ? A LYS 183 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BD9 _pdbx_initial_refinement_model.details 'PDB ENTRY 1BD9' #