data_1KU9 # _entry.id 1KU9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.338 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1KU9 RCSB RCSB015352 WWPDB D_1000015352 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id NYSGXRC-T136 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KU9 _pdbx_database_status.recvd_initial_deposition_date 2002-01-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ray, S.S.' 1 ? 'Bonanno, J.B.' 2 ? 'Chen, H.' 3 ? 'de Lencastre, H.' 4 ? 'Wu, S.' 5 ? 'Tomasz, A.' 6 ? 'Burley, S.K.' 7 0000-0002-2487-9713 'New York SGX Research Center for Structural Genomics (NYSGXRC)' 8 ? # _citation.id primary _citation.title ;X-ray structure of an M. jannaschii DNA-binding protein: implications for antibiotic resistance in S. aureus ; _citation.journal_abbrev Proteins _citation.journal_volume 50 _citation.page_first 170 _citation.page_last 173 _citation.year 2002 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12471609 _citation.pdbx_database_id_DOI 10.1002/prot.10272 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ray, S.S.' 1 ? primary 'Bonanno, J.B.' 2 ? primary 'Chen, H.' 3 ? primary 'de Lencastre, H.' 4 ? primary 'Wu, S.' 5 ? primary 'Tomasz, A.' 6 ? primary 'Burley, S.K.' 7 0000-0002-2487-9713 # _cell.entry_id 1KU9 _cell.length_a 56.939 _cell.length_b 56.939 _cell.length_c 209.515 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1KU9 _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein MJ223' 17875.258 2 ? ? ? 'NYSGRC target T088' 2 water nat water 18.015 86 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HYPOTHETICAL PROTEIN MJ1563' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)II(MSE)EEAKKLIIELFSELAKIHGLNKSVGAVYAILYLSDKPLTISDI(MSE)EELKISKGNVS(MSE)SLKK LEELGFVRKVWIKGERKNYYEAVDGFSSIKDIAKRKHDLIAKTYEDLKKLEEKCNEEEKEFIKQKIKGIER(MSE)KKIS EKILEALNDLDN ; _entity_poly.pdbx_seq_one_letter_code_can ;MIIMEEAKKLIIELFSELAKIHGLNKSVGAVYAILYLSDKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGER KNYYEAVDGFSSIKDIAKRKHDLIAKTYEDLKKLEEKCNEEEKEFIKQKIKGIERMKKISEKILEALNDLDN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier NYSGXRC-T136 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ILE n 1 3 ILE n 1 4 MSE n 1 5 GLU n 1 6 GLU n 1 7 ALA n 1 8 LYS n 1 9 LYS n 1 10 LEU n 1 11 ILE n 1 12 ILE n 1 13 GLU n 1 14 LEU n 1 15 PHE n 1 16 SER n 1 17 GLU n 1 18 LEU n 1 19 ALA n 1 20 LYS n 1 21 ILE n 1 22 HIS n 1 23 GLY n 1 24 LEU n 1 25 ASN n 1 26 LYS n 1 27 SER n 1 28 VAL n 1 29 GLY n 1 30 ALA n 1 31 VAL n 1 32 TYR n 1 33 ALA n 1 34 ILE n 1 35 LEU n 1 36 TYR n 1 37 LEU n 1 38 SER n 1 39 ASP n 1 40 LYS n 1 41 PRO n 1 42 LEU n 1 43 THR n 1 44 ILE n 1 45 SER n 1 46 ASP n 1 47 ILE n 1 48 MSE n 1 49 GLU n 1 50 GLU n 1 51 LEU n 1 52 LYS n 1 53 ILE n 1 54 SER n 1 55 LYS n 1 56 GLY n 1 57 ASN n 1 58 VAL n 1 59 SER n 1 60 MSE n 1 61 SER n 1 62 LEU n 1 63 LYS n 1 64 LYS n 1 65 LEU n 1 66 GLU n 1 67 GLU n 1 68 LEU n 1 69 GLY n 1 70 PHE n 1 71 VAL n 1 72 ARG n 1 73 LYS n 1 74 VAL n 1 75 TRP n 1 76 ILE n 1 77 LYS n 1 78 GLY n 1 79 GLU n 1 80 ARG n 1 81 LYS n 1 82 ASN n 1 83 TYR n 1 84 TYR n 1 85 GLU n 1 86 ALA n 1 87 VAL n 1 88 ASP n 1 89 GLY n 1 90 PHE n 1 91 SER n 1 92 SER n 1 93 ILE n 1 94 LYS n 1 95 ASP n 1 96 ILE n 1 97 ALA n 1 98 LYS n 1 99 ARG n 1 100 LYS n 1 101 HIS n 1 102 ASP n 1 103 LEU n 1 104 ILE n 1 105 ALA n 1 106 LYS n 1 107 THR n 1 108 TYR n 1 109 GLU n 1 110 ASP n 1 111 LEU n 1 112 LYS n 1 113 LYS n 1 114 LEU n 1 115 GLU n 1 116 GLU n 1 117 LYS n 1 118 CYS n 1 119 ASN n 1 120 GLU n 1 121 GLU n 1 122 GLU n 1 123 LYS n 1 124 GLU n 1 125 PHE n 1 126 ILE n 1 127 LYS n 1 128 GLN n 1 129 LYS n 1 130 ILE n 1 131 LYS n 1 132 GLY n 1 133 ILE n 1 134 GLU n 1 135 ARG n 1 136 MSE n 1 137 LYS n 1 138 LYS n 1 139 ILE n 1 140 SER n 1 141 GLU n 1 142 LYS n 1 143 ILE n 1 144 LEU n 1 145 GLU n 1 146 ALA n 1 147 LEU n 1 148 ASN n 1 149 ASP n 1 150 LEU n 1 151 ASP n 1 152 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Methanocaldococcus _entity_src_gen.pdbx_gene_src_gene Mj223 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanocaldococcus jannaschii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2190 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pSKB2 _entity_src_gen.plasmid_details 'variation on pET18B' _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y1563_METJA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIIMEEAKKLIIELFSELAKIHGLNKSVGAVYAILYLSDKPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGER KNYYEAVDGFSSIKDIAKRKHDLIAKTYEDLKKLEEKCNEEEKEFIKQKIKGIERMKKISEKILEALNDLDN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession Q58958 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1KU9 A 1 ? 152 ? Q58958 1 ? 152 ? 1 152 2 1 1KU9 B 1 ? 152 ? Q58958 1 ? 152 ? 1001 1152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1KU9 MSE A 1 ? UNP Q58958 MET 1 'modified residue' 1 1 1 1KU9 MSE A 4 ? UNP Q58958 MET 4 'modified residue' 4 2 1 1KU9 MSE A 48 ? UNP Q58958 MET 48 'modified residue' 48 3 1 1KU9 MSE A 60 ? UNP Q58958 MET 60 'modified residue' 60 4 1 1KU9 MSE A 136 ? UNP Q58958 MET 136 'modified residue' 136 5 2 1KU9 MSE B 1 ? UNP Q58958 MET 1 'modified residue' 1001 6 2 1KU9 MSE B 4 ? UNP Q58958 MET 4 'modified residue' 1004 7 2 1KU9 MSE B 48 ? UNP Q58958 MET 48 'modified residue' 1048 8 2 1KU9 MSE B 60 ? UNP Q58958 MET 60 'modified residue' 1060 9 2 1KU9 MSE B 136 ? UNP Q58958 MET 136 'modified residue' 1136 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1KU9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.15 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pdbx_details '10% dioxane, 30% PEG 8000, TRIS pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRANDEIS - B1' _diffrn_detector.pdbx_collection_date 2001-01-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9793 1.0 2 0.9790 1.0 3 0.9686 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9793, 0.9790, 0.9686' # _reflns.entry_id 1KU9 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.8 _reflns.number_obs 9454 _reflns.number_all 9501 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rsym_value 0.048 _reflns.pdbx_netI_over_sigmaI 38.3 _reflns.B_iso_Wilson_estimate 66 _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.8 _reflns_shell.d_res_low 2.9 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.208 _reflns_shell.pdbx_Rsym_value 0.208 _reflns_shell.meanI_over_sigI_obs 7.7 _reflns_shell.pdbx_redundancy 5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 941 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1KU9 _refine.ls_number_reflns_obs 9257 _refine.ls_number_reflns_all 9426 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 2.8 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.245 _refine.ls_R_factor_all 0.245 _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.28 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 849 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 0.299 _refine.aniso_B[2][2] 0.299 _refine.aniso_B[3][3] -0.599 _refine.aniso_B[1][2] -9.420 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'Data were twinned and appeared to have P6(5)22 symmetry. Refined as space group P6(5) with twinning fraction of 0.485.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2452 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 2538 _refine_hist.d_res_high 2.8 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.47 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.15 ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.83 ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.02 ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.00 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1KU9 _struct.title 'X-ray Structure of a Methanococcus jannaschii DNA-Binding Protein: Implications for Antibiotic Resistance in Staphylococcus aureus' _struct.pdbx_descriptor 'hypothetical protein MJ223' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KU9 _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' _struct_keywords.text ;putative transcription factor, homodimeric winged-helix fold, STRUCTURAL GENOMICS, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, DNA BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'asymmetric unit represents the putative biological assembly' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 2 ? HIS A 22 ? ILE A 2 HIS A 22 1 ? 21 HELX_P HELX_P2 2 ASN A 25 ? SER A 38 ? ASN A 25 SER A 38 1 ? 14 HELX_P HELX_P3 3 ILE A 44 ? LYS A 52 ? ILE A 44 LYS A 52 1 ? 9 HELX_P HELX_P4 4 SER A 54 ? LEU A 68 ? SER A 54 LEU A 68 1 ? 15 HELX_P HELX_P5 5 ASP A 88 ? CYS A 118 ? ASP A 88 CYS A 118 1 ? 31 HELX_P HELX_P6 6 GLU A 122 ? GLU A 134 ? GLU A 122 GLU A 134 1 ? 13 HELX_P HELX_P7 7 GLU A 134 ? ALA A 146 ? GLU A 134 ALA A 146 1 ? 13 HELX_P HELX_P8 8 LEU A 147 ? LEU A 150 ? LEU A 147 LEU A 150 5 ? 4 HELX_P HELX_P9 9 ILE B 2 ? HIS B 22 ? ILE B 1002 HIS B 1022 1 ? 21 HELX_P HELX_P10 10 ASN B 25 ? SER B 38 ? ASN B 1025 SER B 1038 1 ? 14 HELX_P HELX_P11 11 THR B 43 ? LYS B 52 ? THR B 1043 LYS B 1052 1 ? 10 HELX_P HELX_P12 12 SER B 54 ? GLY B 69 ? SER B 1054 GLY B 1069 1 ? 16 HELX_P HELX_P13 13 ASP B 88 ? CYS B 118 ? ASP B 1088 CYS B 1118 1 ? 31 HELX_P HELX_P14 14 GLU B 122 ? GLU B 134 ? GLU B 1122 GLU B 1134 1 ? 13 HELX_P HELX_P15 15 GLU B 134 ? ALA B 146 ? GLU B 1134 ALA B 1146 1 ? 13 HELX_P HELX_P16 16 LEU B 147 ? LEU B 150 ? LEU B 1147 LEU B 1150 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 1 C ? ? ? 1_555 A ILE 2 N ? ? A MSE 1 A ILE 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A ILE 3 C ? ? ? 1_555 A MSE 4 N ? ? A ILE 3 A MSE 4 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A MSE 4 C ? ? ? 1_555 A GLU 5 N ? ? A MSE 4 A GLU 5 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale4 covale both ? A ILE 47 C ? ? ? 1_555 A MSE 48 N ? ? A ILE 47 A MSE 48 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale5 covale both ? A MSE 48 C ? ? ? 1_555 A GLU 49 N ? ? A MSE 48 A GLU 49 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale6 covale both ? A SER 59 C ? ? ? 1_555 A MSE 60 N ? ? A SER 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A MSE 60 C ? ? ? 1_555 A SER 61 N ? ? A MSE 60 A SER 61 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? A ARG 135 C ? ? ? 1_555 A MSE 136 N ? ? A ARG 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? A MSE 136 C ? ? ? 1_555 A LYS 137 N ? ? A MSE 136 A LYS 137 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? B MSE 1 C ? ? ? 1_555 B ILE 2 N ? ? B MSE 1001 B ILE 1002 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale both ? B ILE 3 C ? ? ? 1_555 B MSE 4 N ? ? B ILE 1003 B MSE 1004 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale12 covale both ? B MSE 4 C ? ? ? 1_555 B GLU 5 N ? ? B MSE 1004 B GLU 1005 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale13 covale both ? B ILE 47 C ? ? ? 1_555 B MSE 48 N ? ? B ILE 1047 B MSE 1048 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale14 covale both ? B MSE 48 C ? ? ? 1_555 B GLU 49 N ? ? B MSE 1048 B GLU 1049 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale15 covale both ? B SER 59 C ? ? ? 1_555 B MSE 60 N ? ? B SER 1059 B MSE 1060 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale16 covale both ? B MSE 60 C ? ? ? 1_555 B SER 61 N ? ? B MSE 1060 B SER 1061 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale17 covale both ? B ARG 135 C ? ? ? 1_555 B MSE 136 N ? ? B ARG 1135 B MSE 1136 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale18 covale both ? B MSE 136 C ? ? ? 1_555 B LYS 137 N ? ? B MSE 1136 B LYS 1137 1_555 ? ? ? ? ? ? ? 1.323 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 42 ? THR A 43 ? LEU A 42 THR A 43 A 2 TYR A 83 ? ALA A 86 ? TYR A 83 ALA A 86 A 3 VAL A 71 ? VAL A 74 ? VAL A 71 VAL A 74 B 1 VAL B 71 ? VAL B 74 ? VAL B 1071 VAL B 1074 B 2 TYR B 83 ? ALA B 86 ? TYR B 1083 ALA B 1086 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 42 ? N LEU A 42 O TYR A 84 ? O TYR A 84 A 2 3 O TYR A 83 ? O TYR A 83 N VAL A 74 ? N VAL A 74 B 1 2 N VAL B 74 ? N VAL B 1074 O TYR B 83 ? O TYR B 1083 # _database_PDB_matrix.entry_id 1KU9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KU9 _atom_sites.fract_transf_matrix[1][1] 0.01756 _atom_sites.fract_transf_matrix[1][2] 0.01014 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02028 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00477 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 MSE 4 4 4 MSE MSE A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 MSE 48 48 48 MSE MSE A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 MSE 60 60 60 MSE MSE A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 TRP 75 75 75 TRP TRP A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ASN 82 82 82 ASN ASN A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 GLU 85 85 85 GLU GLU A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 PHE 90 90 90 PHE PHE A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 ASP 95 95 95 ASP ASP A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 HIS 101 101 101 HIS HIS A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 LYS 112 112 112 LYS LYS A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLU 121 121 121 GLU GLU A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 GLU 124 124 124 GLU GLU A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 ILE 133 133 133 ILE ILE A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 MSE 136 136 136 MSE MSE A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 SER 140 140 140 SER SER A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 ASN 148 148 148 ASN ASN A . n A 1 149 ASP 149 149 149 ASP ASP A . n A 1 150 LEU 150 150 150 LEU LEU A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 ASN 152 152 ? ? ? A . n B 1 1 MSE 1 1001 1001 MSE MSE B . n B 1 2 ILE 2 1002 1002 ILE ILE B . n B 1 3 ILE 3 1003 1003 ILE ILE B . n B 1 4 MSE 4 1004 1004 MSE MSE B . n B 1 5 GLU 5 1005 1005 GLU GLU B . n B 1 6 GLU 6 1006 1006 GLU GLU B . n B 1 7 ALA 7 1007 1007 ALA ALA B . n B 1 8 LYS 8 1008 1008 LYS LYS B . n B 1 9 LYS 9 1009 1009 LYS LYS B . n B 1 10 LEU 10 1010 1010 LEU LEU B . n B 1 11 ILE 11 1011 1011 ILE ILE B . n B 1 12 ILE 12 1012 1012 ILE ILE B . n B 1 13 GLU 13 1013 1013 GLU GLU B . n B 1 14 LEU 14 1014 1014 LEU LEU B . n B 1 15 PHE 15 1015 1015 PHE PHE B . n B 1 16 SER 16 1016 1016 SER SER B . n B 1 17 GLU 17 1017 1017 GLU GLU B . n B 1 18 LEU 18 1018 1018 LEU LEU B . n B 1 19 ALA 19 1019 1019 ALA ALA B . n B 1 20 LYS 20 1020 1020 LYS LYS B . n B 1 21 ILE 21 1021 1021 ILE ILE B . n B 1 22 HIS 22 1022 1022 HIS HIS B . n B 1 23 GLY 23 1023 1023 GLY GLY B . n B 1 24 LEU 24 1024 1024 LEU LEU B . n B 1 25 ASN 25 1025 1025 ASN ASN B . n B 1 26 LYS 26 1026 1026 LYS LYS B . n B 1 27 SER 27 1027 1027 SER SER B . n B 1 28 VAL 28 1028 1028 VAL VAL B . n B 1 29 GLY 29 1029 1029 GLY GLY B . n B 1 30 ALA 30 1030 1030 ALA ALA B . n B 1 31 VAL 31 1031 1031 VAL VAL B . n B 1 32 TYR 32 1032 1032 TYR TYR B . n B 1 33 ALA 33 1033 1033 ALA ALA B . n B 1 34 ILE 34 1034 1034 ILE ILE B . n B 1 35 LEU 35 1035 1035 LEU LEU B . n B 1 36 TYR 36 1036 1036 TYR TYR B . n B 1 37 LEU 37 1037 1037 LEU LEU B . n B 1 38 SER 38 1038 1038 SER SER B . n B 1 39 ASP 39 1039 1039 ASP ASP B . n B 1 40 LYS 40 1040 1040 LYS LYS B . n B 1 41 PRO 41 1041 1041 PRO PRO B . n B 1 42 LEU 42 1042 1042 LEU LEU B . n B 1 43 THR 43 1043 1043 THR THR B . n B 1 44 ILE 44 1044 1044 ILE ILE B . n B 1 45 SER 45 1045 1045 SER SER B . n B 1 46 ASP 46 1046 1046 ASP ASP B . n B 1 47 ILE 47 1047 1047 ILE ILE B . n B 1 48 MSE 48 1048 1048 MSE MSE B . n B 1 49 GLU 49 1049 1049 GLU GLU B . n B 1 50 GLU 50 1050 1050 GLU GLU B . n B 1 51 LEU 51 1051 1051 LEU LEU B . n B 1 52 LYS 52 1052 1052 LYS LYS B . n B 1 53 ILE 53 1053 1053 ILE ILE B . n B 1 54 SER 54 1054 1054 SER SER B . n B 1 55 LYS 55 1055 1055 LYS LYS B . n B 1 56 GLY 56 1056 1056 GLY GLY B . n B 1 57 ASN 57 1057 1057 ASN ASN B . n B 1 58 VAL 58 1058 1058 VAL VAL B . n B 1 59 SER 59 1059 1059 SER SER B . n B 1 60 MSE 60 1060 1060 MSE MSE B . n B 1 61 SER 61 1061 1061 SER SER B . n B 1 62 LEU 62 1062 1062 LEU LEU B . n B 1 63 LYS 63 1063 1063 LYS LYS B . n B 1 64 LYS 64 1064 1064 LYS LYS B . n B 1 65 LEU 65 1065 1065 LEU LEU B . n B 1 66 GLU 66 1066 1066 GLU GLU B . n B 1 67 GLU 67 1067 1067 GLU GLU B . n B 1 68 LEU 68 1068 1068 LEU LEU B . n B 1 69 GLY 69 1069 1069 GLY GLY B . n B 1 70 PHE 70 1070 1070 PHE PHE B . n B 1 71 VAL 71 1071 1071 VAL VAL B . n B 1 72 ARG 72 1072 1072 ARG ARG B . n B 1 73 LYS 73 1073 1073 LYS LYS B . n B 1 74 VAL 74 1074 1074 VAL VAL B . n B 1 75 TRP 75 1075 1075 TRP TRP B . n B 1 76 ILE 76 1076 1076 ILE ILE B . n B 1 77 LYS 77 1077 1077 LYS LYS B . n B 1 78 GLY 78 1078 1078 GLY GLY B . n B 1 79 GLU 79 1079 1079 GLU GLU B . n B 1 80 ARG 80 1080 1080 ARG ARG B . n B 1 81 LYS 81 1081 1081 LYS LYS B . n B 1 82 ASN 82 1082 1082 ASN ASN B . n B 1 83 TYR 83 1083 1083 TYR TYR B . n B 1 84 TYR 84 1084 1084 TYR TYR B . n B 1 85 GLU 85 1085 1085 GLU GLU B . n B 1 86 ALA 86 1086 1086 ALA ALA B . n B 1 87 VAL 87 1087 1087 VAL VAL B . n B 1 88 ASP 88 1088 1088 ASP ASP B . n B 1 89 GLY 89 1089 1089 GLY GLY B . n B 1 90 PHE 90 1090 1090 PHE PHE B . n B 1 91 SER 91 1091 1091 SER SER B . n B 1 92 SER 92 1092 1092 SER SER B . n B 1 93 ILE 93 1093 1093 ILE ILE B . n B 1 94 LYS 94 1094 1094 LYS LYS B . n B 1 95 ASP 95 1095 1095 ASP ASP B . n B 1 96 ILE 96 1096 1096 ILE ILE B . n B 1 97 ALA 97 1097 1097 ALA ALA B . n B 1 98 LYS 98 1098 1098 LYS LYS B . n B 1 99 ARG 99 1099 1099 ARG ARG B . n B 1 100 LYS 100 1100 1100 LYS LYS B . n B 1 101 HIS 101 1101 1101 HIS HIS B . n B 1 102 ASP 102 1102 1102 ASP ASP B . n B 1 103 LEU 103 1103 1103 LEU LEU B . n B 1 104 ILE 104 1104 1104 ILE ILE B . n B 1 105 ALA 105 1105 1105 ALA ALA B . n B 1 106 LYS 106 1106 1106 LYS LYS B . n B 1 107 THR 107 1107 1107 THR THR B . n B 1 108 TYR 108 1108 1108 TYR TYR B . n B 1 109 GLU 109 1109 1109 GLU GLU B . n B 1 110 ASP 110 1110 1110 ASP ASP B . n B 1 111 LEU 111 1111 1111 LEU LEU B . n B 1 112 LYS 112 1112 1112 LYS LYS B . n B 1 113 LYS 113 1113 1113 LYS LYS B . n B 1 114 LEU 114 1114 1114 LEU LEU B . n B 1 115 GLU 115 1115 1115 GLU GLU B . n B 1 116 GLU 116 1116 1116 GLU GLU B . n B 1 117 LYS 117 1117 1117 LYS LYS B . n B 1 118 CYS 118 1118 1118 CYS CYS B . n B 1 119 ASN 119 1119 1119 ASN ASN B . n B 1 120 GLU 120 1120 1120 GLU GLU B . n B 1 121 GLU 121 1121 1121 GLU GLU B . n B 1 122 GLU 122 1122 1122 GLU GLU B . n B 1 123 LYS 123 1123 1123 LYS LYS B . n B 1 124 GLU 124 1124 1124 GLU GLU B . n B 1 125 PHE 125 1125 1125 PHE PHE B . n B 1 126 ILE 126 1126 1126 ILE ILE B . n B 1 127 LYS 127 1127 1127 LYS LYS B . n B 1 128 GLN 128 1128 1128 GLN GLN B . n B 1 129 LYS 129 1129 1129 LYS LYS B . n B 1 130 ILE 130 1130 1130 ILE ILE B . n B 1 131 LYS 131 1131 1131 LYS LYS B . n B 1 132 GLY 132 1132 1132 GLY GLY B . n B 1 133 ILE 133 1133 1133 ILE ILE B . n B 1 134 GLU 134 1134 1134 GLU GLU B . n B 1 135 ARG 135 1135 1135 ARG ARG B . n B 1 136 MSE 136 1136 1136 MSE MSE B . n B 1 137 LYS 137 1137 1137 LYS LYS B . n B 1 138 LYS 138 1138 1138 LYS LYS B . n B 1 139 ILE 139 1139 1139 ILE ILE B . n B 1 140 SER 140 1140 1140 SER SER B . n B 1 141 GLU 141 1141 1141 GLU GLU B . n B 1 142 LYS 142 1142 1142 LYS LYS B . n B 1 143 ILE 143 1143 1143 ILE ILE B . n B 1 144 LEU 144 1144 1144 LEU LEU B . n B 1 145 GLU 145 1145 1145 GLU GLU B . n B 1 146 ALA 146 1146 1146 ALA ALA B . n B 1 147 LEU 147 1147 1147 LEU LEU B . n B 1 148 ASN 148 1148 1148 ASN ASN B . n B 1 149 ASP 149 1149 1149 ASP ASP B . n B 1 150 LEU 150 1150 1150 LEU LEU B . n B 1 151 ASP 151 1151 1151 ASP ASP B . n B 1 152 ASN 152 1152 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'New York SGX Research Center for Structural Genomics' _pdbx_SG_project.initial_of_center NYSGXRC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 153 153 HOH HOH A . C 2 HOH 2 155 155 HOH HOH A . C 2 HOH 3 156 156 HOH HOH A . C 2 HOH 4 157 157 HOH HOH A . C 2 HOH 5 160 160 HOH HOH A . C 2 HOH 6 163 163 HOH HOH A . C 2 HOH 7 164 164 HOH HOH A . C 2 HOH 8 165 165 HOH HOH A . C 2 HOH 9 166 166 HOH HOH A . C 2 HOH 10 167 167 HOH HOH A . C 2 HOH 11 169 169 HOH HOH A . C 2 HOH 12 170 170 HOH HOH A . C 2 HOH 13 175 175 HOH HOH A . C 2 HOH 14 177 177 HOH HOH A . C 2 HOH 15 178 178 HOH HOH A . C 2 HOH 16 182 182 HOH HOH A . C 2 HOH 17 185 185 HOH HOH A . C 2 HOH 18 186 186 HOH HOH A . C 2 HOH 19 188 188 HOH HOH A . C 2 HOH 20 189 189 HOH HOH A . C 2 HOH 21 191 191 HOH HOH A . C 2 HOH 22 193 193 HOH HOH A . C 2 HOH 23 194 194 HOH HOH A . C 2 HOH 24 195 195 HOH HOH A . C 2 HOH 25 196 196 HOH HOH A . C 2 HOH 26 197 197 HOH HOH A . C 2 HOH 27 198 198 HOH HOH A . C 2 HOH 28 199 199 HOH HOH A . C 2 HOH 29 203 203 HOH HOH A . C 2 HOH 30 205 205 HOH HOH A . C 2 HOH 31 206 206 HOH HOH A . C 2 HOH 32 210 210 HOH HOH A . C 2 HOH 33 213 213 HOH HOH A . C 2 HOH 34 214 214 HOH HOH A . C 2 HOH 35 216 216 HOH HOH A . C 2 HOH 36 222 222 HOH HOH A . C 2 HOH 37 223 223 HOH HOH A . C 2 HOH 38 224 224 HOH HOH A . C 2 HOH 39 231 231 HOH HOH A . C 2 HOH 40 234 234 HOH HOH A . C 2 HOH 41 235 235 HOH HOH A . D 2 HOH 1 152 152 HOH HOH B . D 2 HOH 2 154 154 HOH HOH B . D 2 HOH 3 158 158 HOH HOH B . D 2 HOH 4 159 159 HOH HOH B . D 2 HOH 5 161 161 HOH HOH B . D 2 HOH 6 162 162 HOH HOH B . D 2 HOH 7 168 168 HOH HOH B . D 2 HOH 8 171 171 HOH HOH B . D 2 HOH 9 172 172 HOH HOH B . D 2 HOH 10 173 173 HOH HOH B . D 2 HOH 11 174 174 HOH HOH B . D 2 HOH 12 176 176 HOH HOH B . D 2 HOH 13 179 179 HOH HOH B . D 2 HOH 14 180 180 HOH HOH B . D 2 HOH 15 181 181 HOH HOH B . D 2 HOH 16 183 183 HOH HOH B . D 2 HOH 17 184 184 HOH HOH B . D 2 HOH 18 187 187 HOH HOH B . D 2 HOH 19 190 190 HOH HOH B . D 2 HOH 20 192 192 HOH HOH B . D 2 HOH 21 200 200 HOH HOH B . D 2 HOH 22 201 201 HOH HOH B . D 2 HOH 23 202 202 HOH HOH B . D 2 HOH 24 204 204 HOH HOH B . D 2 HOH 25 207 207 HOH HOH B . D 2 HOH 26 208 208 HOH HOH B . D 2 HOH 27 209 209 HOH HOH B . D 2 HOH 28 211 211 HOH HOH B . D 2 HOH 29 212 212 HOH HOH B . D 2 HOH 30 215 215 HOH HOH B . D 2 HOH 31 217 217 HOH HOH B . D 2 HOH 32 218 218 HOH HOH B . D 2 HOH 33 219 219 HOH HOH B . D 2 HOH 34 220 220 HOH HOH B . D 2 HOH 35 221 221 HOH HOH B . D 2 HOH 36 225 225 HOH HOH B . D 2 HOH 37 226 226 HOH HOH B . D 2 HOH 38 227 227 HOH HOH B . D 2 HOH 39 228 228 HOH HOH B . D 2 HOH 40 229 229 HOH HOH B . D 2 HOH 41 230 230 HOH HOH B . D 2 HOH 42 232 232 HOH HOH B . D 2 HOH 43 233 233 HOH HOH B . D 2 HOH 44 236 236 HOH HOH B . D 2 HOH 45 237 237 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 4 A MSE 4 ? MET SELENOMETHIONINE 3 A MSE 48 A MSE 48 ? MET SELENOMETHIONINE 4 A MSE 60 A MSE 60 ? MET SELENOMETHIONINE 5 A MSE 136 A MSE 136 ? MET SELENOMETHIONINE 6 B MSE 1 B MSE 1001 ? MET SELENOMETHIONINE 7 B MSE 4 B MSE 1004 ? MET SELENOMETHIONINE 8 B MSE 48 B MSE 1048 ? MET SELENOMETHIONINE 9 B MSE 60 B MSE 1060 ? MET SELENOMETHIONINE 10 B MSE 136 B MSE 1136 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4550 ? 1 MORE -52 ? 1 'SSA (A^2)' 17200 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-12-25 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 5 'Structure model' 1 4 2021-02-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' audit_author 3 5 'Structure model' citation_author 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 4 'Structure model' '_software.version' 4 5 'Structure model' '_audit_author.identifier_ORCID' 5 5 'Structure model' '_citation_author.identifier_ORCID' 6 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MARMAD 'data collection' . ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SnB phasing . ? 4 MLPHARE phasing . ? 5 DM 'model building' . ? 6 CNS refinement 1.0 ? 7 MARMAD 'data reduction' . ? 8 DM phasing . ? 9 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 52 ? ? 45.37 74.19 2 1 MSE A 60 ? ? -52.32 -73.67 3 1 ALA A 105 ? ? -41.62 -72.87 4 1 CYS A 118 ? ? -51.44 94.61 5 1 GLU A 120 ? ? 86.70 -98.66 6 1 ASN A 148 ? ? -98.83 44.52 7 1 LYS B 1052 ? ? 58.60 89.05 8 1 SER B 1054 ? ? -42.75 162.55 9 1 ASP B 1088 ? ? -50.22 102.43 10 1 CYS B 1118 ? ? -62.57 95.78 11 1 ASN B 1119 ? ? -131.07 -157.19 12 1 GLU B 1120 ? ? 64.99 -105.64 13 1 ASN B 1148 ? ? -94.23 42.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 152 ? A ASN 152 2 1 Y 1 B ASN 1152 ? B ASN 152 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #