HEADER VIRUS 12-DEC-97 1KVP TITLE STRUCTURAL ANALYSIS OF THE SPIROPLASMA VIRUS, SPV4, IMPLICATIONS FOR TITLE 2 EVOLUTIONARY VARIATION TO OBTAIN HOST DIVERSITY AMONG THE TITLE 3 MICROVIRIDAE, ELECTRON MICROSCOPY, ALPHA CARBONS ONLY COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPV4 CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE PHIX174; SOURCE 3 ORGANISM_TAXID: 10847; SOURCE 4 EXPRESSION_SYSTEM: SPIROPLASMA MELLIFERUM; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 2134 KEYWDS BACTERIOPHAGE SPV4 COAT PROTEIN, CHIMERA, ICOSAHEDRAL VIRUS, VIRUS EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN A AUTHOR R.MCKENNA REVDAT 4 14-FEB-24 1KVP 1 REMARK SEQADV REVDAT 3 25-AUG-09 1KVP 1 SOURCE REVDAT 2 24-FEB-09 1KVP 1 VERSN REVDAT 1 23-FEB-99 1KVP 0 JRNL AUTH P.R.CHIPMAN,M.AGBANDJE-MCKENNA,J.RENAUDIN,T.S.BAKER, JRNL AUTH 2 R.MCKENNA JRNL TITL STRUCTURAL ANALYSIS OF THE SPIROPLASMA VIRUS, SPV4: JRNL TITL 2 IMPLICATIONS FOR EVOLUTIONARY VARIATION TO OBTAIN HOST JRNL TITL 3 DIVERSITY AMONG THE MICROVIRIDAE. JRNL REF STRUCTURE V. 6 135 1998 JRNL REFN ISSN 0969-2126 JRNL PMID 9519405 JRNL DOI 10.1016/S0969-2126(98)00016-1 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.MCKENNA,D.XIA,P.WILLINGMANN,L.L.ILAG,S.KRISHNASWAMY, REMARK 1 AUTH 2 M.G.ROSSMANN,N.H.OLSON,T.S.BAKER,N.L.INCARDONA REMARK 1 TITL ATOMIC STRUCTURE OF SINGLE-STRANDED DNA BACTERIOPHAGE PHI REMARK 1 TITL 2 X174 AND ITS FUNCTIONAL IMPLICATIONS REMARK 1 REF NATURE V. 355 137 1992 REMARK 1 REFN ISSN 0028-0836 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.RENAUDIN,M.C.PASCAREL,M.GARNIER,P.CARLE,J.M.BOVE REMARK 1 TITL CHARACTERIZATION OF SPIROPLASMA VIRUS GROUP 4 (SV4) REMARK 1 REF ISR.J.MED.SCI. V. 20 797 1984 REMARK 1 REFN ISSN 0021-2180 REMARK 2 REMARK 2 RESOLUTION. 27.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : DETAILS--THE CRYSTAL STRUCTURE OF HRV16 WAS REMARK 3 PLACED INTO THE CALIBRATED CRYO-EM DENSITY MAP BY ALIGNING THE REMARK 3 ICOSAHEDRAL SYMMETRY AXES. APPROPRIATELY GLYCOSYLATED MODELS OF REMARK 3 D1D2-ICAM-1 WITH VARIOUS INTERDOMAIN ANGLES (AS SEEN IN REMARK 3 DIFFERENT CRYSTAL STRUCTURES OF D1D2-ICAM-1), WERE FIRST REMARK 3 MANUALLY FITTED INTO THE CRYO-EM DENSITY CORRESPONDING TO THE REMARK 3 ICAM-1 FRAGMENT, AND SUBSEQUENTLY REFINED AS RIGID BODIES IN REMARK 3 RECIPROCAL SPACE. OBSERVED STRUCTURE FACTORS WERE OBTAINED BY REMARK 3 INVERSE FOURIER TRANSFORM OF CRYO-EM DIFFERENCE MAPS CALCULATED REMARK 3 BY- 1) SUBSTRACTION OF THE HRV16 AND RNA CONTRIBUTION FROM THE REMARK 3 CRYO-EM RECONSTRUCTED DENSITY OF THE COMPLEXES; 2) REDUCTION OF REMARK 3 THE DIFFERENCE MAPS TO AN ICOSAHEDRAL ASYMMETRIC UNIT. THE REMARK 3 COORDINATES ARE IN THE P, Q, R FRAME IN ANGSTROM UNITS AND REMARK 3 CORRESPOND TO ICOSAHEDRAL SYMMETRY AXES. THE ORIGIN IS CHOSEN AT REMARK 3 THE CENTER OF THE VIRUS WITH P, Q AND R ALONG MUTUALLY REMARK 3 PERPENDICULAR TWO-FOLD AXES OF THE ICOSAHEDRON. THEY SHOULD REMARK 3 REMAIN IN THAT FRAME FOR THE EASE OF THE USER IN CREATING THE REMARK 3 BIOLOGICALLY SIGNIFICANT VIRAL COMPLEX PARTICLE USING THE 60 REMARK 3 ICOSAHEDRAL SYMMETRY OPERATORS. RESIDUES NOT VISIBLE IN THE REMARK 3 ORIGINAL CRYSTAL STRUCTURES ARE NOT INCLUDED IN THE CRYO-EM REMARK 3 STRUCTURE MODEL. FOR EXAMPLE, HRV16 RESIDUES 2001-2009, 4008- REMARK 3 4022 AND 4045-4068 ARE NOT VISIBLE IN THE CRYSTAL STRUCTURE (PDB REMARK 3 ENTRY 1AYM) AND THEREFORE ARE NOT INCLUDED IN THE COORDINATES REMARK 3 BELOW. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 27.00 REMARK 3 NUMBER OF PARTICLES : NULL REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: CA TRACING OF A MODEL OF THE CAPSID PROTEIN VP1 OF REMARK 3 SPV4 BASED ON THE CRYSTAL STRUCTURAL COORDINATES OF THE MAJOR REMARK 3 CAPSID PROTEIN F OF PHIX174 (RESIDUES 1001 - 1427). A 71 AMINO REMARK 3 ACID PORTION OF VP1 WAS MODELLED (GLY 226 - THR 297) AS AN REMARK 3 INSERTION LOOP BETWEEN RESIDUES THR 1187 AND THR 1188 OF THE F REMARK 3 CAPSID PROTEIN OF PHIX174. THE COORDINATES ARE IN THE P, Q, R REMARK 3 FRAME IN ANGSTROM UNITS AND CORRESPOND TO ICOSAHEDRAL SYMMETRY REMARK 3 AXES. THE ORIGIN IS CHOSEN AT THE CENTER OF THE VIRUS WITH P, Q REMARK 3 AND R ALONG MUTUALLY PERPENDICULAR TWO-FOLD AXES OF THE REMARK 3 ICOSAHEDRON. RESIDUES 1001 - 1187 AND 1187 - 1426 ARE THE CA REMARK 3 COORDINATES OF THE F CAPSID PROTEIN OF PHIX174. INSERTED BETWEEN REMARK 3 RESIDUES 1187 AND 1188 IS A MODELLED CA TRACING OF A 71 AMINO REMARK 3 ACID INSERTION LOOP OF SPV4 (RESIDUES 226 - 297) OF THE VP1 REMARK 3 CAPSID PROTEIN, BASED ON THE CRYO-EM RECONSTRUCTION ENVELOPE AND REMARK 3 STRUCTURAL ALIGNMENT AND SECONDARY STRUCTURE PREDICTION. THE REMARK 3 RESOLUTION OF THE FINAL RECONSTRUCTED DENSITY MAP WAS DETERMINED REMARK 3 TO BE AT LEAST 27 ANGSTROMS AS MEASURED BY STRUCTURE FACTOR REMARK 3 COMPARISONS (BAKER ET AL. 1991, BIOPHYS. J. 60,1445-1456) AND REMARK 3 FOURIER RING CORRELATION MEASUREMENTS (CONWAY ET AL. 1996, J. REMARK 3 STRUC. BIOL. 116, 200-208) REMARK 4 REMARK 4 1KVP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000174505. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SPIROPLASMA VIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 9.20 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI/PHILIPS EM420 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : 800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 49000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : NULL REMARK 245 ACCELERATION VOLTAGE (KV) : NULL REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 2 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 2 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 3 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 4 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 5 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 7 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 8 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 8 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 9 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 10 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 12 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 12 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 13 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 13 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 13 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 14 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 14 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 14 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 15 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 15 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 15 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 16 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 17 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 17 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 18 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 18 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 18 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 19 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 19 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 19 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 20 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 20 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 20 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 22 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 22 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 23 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 24 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 24 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 25 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 25 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 25 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 26 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 27 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 27 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 28 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 28 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 28 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 29 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 29 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT3 29 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 30 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 30 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 30 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 32 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 32 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 33 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 33 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 33 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 34 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 35 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 35 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 36 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 36 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 37 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 37 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 38 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT2 38 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT3 38 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 39 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 39 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 39 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT1 40 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 40 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 40 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 41 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 41 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 43 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 43 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 44 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 44 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 44 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 45 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 45 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 45 0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 47 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 47 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 48 0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT2 48 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 48 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 49 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 49 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 50 0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 50 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 52 -0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 52 0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT1 53 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 53 0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 53 0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 54 0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT3 54 -0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 55 -0.809017 0.309017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.309017 -0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.809017 0.309017 0.00000 REMARK 350 BIOMT3 57 -0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.809017 -0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 58 -0.309017 -0.500000 0.809017 0.00000 REMARK 350 BIOMT3 58 -0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT1 59 -0.809017 0.309017 -0.500000 0.00000 REMARK 350 BIOMT2 59 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 59 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 60 -0.309017 0.500000 -0.809017 0.00000 REMARK 350 BIOMT2 60 0.500000 0.809017 0.309017 0.00000 REMARK 350 BIOMT3 60 0.809017 -0.309017 -0.500000 0.00000 DBREF 1KVP A 1001 1426 UNP P03641 VGF_BPPHX 1 426 SEQADV 1KVP GLY A 1 UNP P03641 INSERTION SEQADV 1KVP MET A 2 UNP P03641 INSERTION SEQADV 1KVP ALA A 3 UNP P03641 INSERTION SEQADV 1KVP PRO A 4 UNP P03641 INSERTION SEQADV 1KVP VAL A 5 UNP P03641 INSERTION SEQADV 1KVP THR A 6 UNP P03641 INSERTION SEQADV 1KVP THR A 7 UNP P03641 INSERTION SEQADV 1KVP LYS A 8 UNP P03641 INSERTION SEQADV 1KVP PHE A 9 UNP P03641 INSERTION SEQADV 1KVP ARG A 10 UNP P03641 INSERTION SEQADV 1KVP ASP A 11 UNP P03641 INSERTION SEQADV 1KVP VAL A 12 UNP P03641 INSERTION SEQADV 1KVP PRO A 13 UNP P03641 INSERTION SEQADV 1KVP ASN A 14 UNP P03641 INSERTION SEQADV 1KVP LEU A 15 UNP P03641 INSERTION SEQADV 1KVP SER A 16 UNP P03641 INSERTION SEQADV 1KVP GLY A 17 UNP P03641 INSERTION SEQADV 1KVP THR A 18 UNP P03641 INSERTION SEQADV 1KVP PRO A 19 UNP P03641 INSERTION SEQADV 1KVP LEU A 20 UNP P03641 INSERTION SEQADV 1KVP ILE A 21 UNP P03641 INSERTION SEQADV 1KVP PHE A 22 UNP P03641 INSERTION SEQADV 1KVP ARG A 23 UNP P03641 INSERTION SEQADV 1KVP ASP A 24 UNP P03641 INSERTION SEQADV 1KVP ASN A 25 UNP P03641 INSERTION SEQADV 1KVP LYS A 26 UNP P03641 INSERTION SEQADV 1KVP GLY A 27 UNP P03641 INSERTION SEQADV 1KVP ARG A 28 UNP P03641 INSERTION SEQADV 1KVP THR A 29 UNP P03641 INSERTION SEQADV 1KVP ILE A 30 UNP P03641 INSERTION SEQADV 1KVP LYS A 31 UNP P03641 INSERTION SEQADV 1KVP THR A 32 UNP P03641 INSERTION SEQADV 1KVP GLY A 33 UNP P03641 INSERTION SEQADV 1KVP GLN A 34 UNP P03641 INSERTION SEQADV 1KVP LEU A 35 UNP P03641 INSERTION SEQADV 1KVP GLY A 36 UNP P03641 INSERTION SEQADV 1KVP ILE A 37 UNP P03641 INSERTION SEQADV 1KVP GLY A 38 UNP P03641 INSERTION SEQADV 1KVP PRO A 39 UNP P03641 INSERTION SEQADV 1KVP VAL A 40 UNP P03641 INSERTION SEQADV 1KVP ASP A 41 UNP P03641 INSERTION SEQADV 1KVP ALA A 42 UNP P03641 INSERTION SEQADV 1KVP GLY A 43 UNP P03641 INSERTION SEQADV 1KVP PHE A 44 UNP P03641 INSERTION SEQADV 1KVP LEU A 45 UNP P03641 INSERTION SEQADV 1KVP VAL A 46 UNP P03641 INSERTION SEQADV 1KVP ALA A 47 UNP P03641 INSERTION SEQADV 1KVP GLN A 48 UNP P03641 INSERTION SEQADV 1KVP ASN A 49 UNP P03641 INSERTION SEQADV 1KVP THR A 50 UNP P03641 INSERTION SEQADV 1KVP ALA A 51 UNP P03641 INSERTION SEQADV 1KVP GLN A 52 UNP P03641 INSERTION SEQADV 1KVP ALA A 53 UNP P03641 INSERTION SEQADV 1KVP ALA A 54 UNP P03641 INSERTION SEQADV 1KVP ASN A 55 UNP P03641 INSERTION SEQADV 1KVP GLY A 56 UNP P03641 INSERTION SEQADV 1KVP GLU A 57 UNP P03641 INSERTION SEQADV 1KVP ARG A 58 UNP P03641 INSERTION SEQADV 1KVP ALA A 59 UNP P03641 INSERTION SEQADV 1KVP ILE A 60 UNP P03641 INSERTION SEQADV 1KVP PRO A 61 UNP P03641 INSERTION SEQADV 1KVP SER A 62 UNP P03641 INSERTION SEQADV 1KVP ASN A 63 UNP P03641 INSERTION SEQADV 1KVP LEU A 64 UNP P03641 INSERTION SEQADV 1KVP TRP A 65 UNP P03641 INSERTION SEQADV 1KVP ALA A 66 UNP P03641 INSERTION SEQADV 1KVP ASP A 67 UNP P03641 INSERTION SEQADV 1KVP LEU A 68 UNP P03641 INSERTION SEQADV 1KVP SER A 69 UNP P03641 INSERTION SEQADV 1KVP ASN A 70 UNP P03641 INSERTION SEQADV 1KVP ALA A 71 UNP P03641 INSERTION SEQADV 1KVP ARG A 1216 UNP P03641 HIS 216 CONFLICT SEQRES 1 A 497 SER ASN ILE GLN THR GLY ALA GLU ARG MET PRO HIS ASP SEQRES 2 A 497 LEU SER HIS LEU GLY PHE LEU ALA GLY GLN ILE GLY ARG SEQRES 3 A 497 LEU ILE THR ILE SER THR THR PRO VAL ILE ALA GLY ASP SEQRES 4 A 497 SER PHE GLU MET ASP ALA VAL GLY ALA LEU ARG LEU SER SEQRES 5 A 497 PRO LEU ARG ARG GLY LEU ALA ILE ASP SER THR VAL ASP SEQRES 6 A 497 ILE PHE THR PHE TYR VAL PRO HIS ARG HIS VAL TYR GLY SEQRES 7 A 497 GLU GLN TRP ILE LYS PHE MET LYS ASP GLY VAL ASN ALA SEQRES 8 A 497 THR PRO LEU PRO THR VAL ASN THR THR GLY TYR ILE ASP SEQRES 9 A 497 HIS ALA ALA PHE LEU GLY THR ILE ASN PRO ASP THR ASN SEQRES 10 A 497 LYS ILE PRO LYS HIS LEU PHE GLN GLY TYR LEU ASN ILE SEQRES 11 A 497 TYR ASN ASN TYR PHE LYS ALA PRO TRP MET PRO ASP ARG SEQRES 12 A 497 THR GLU ALA ASN PRO ASN GLU LEU ASN GLN ASP ASP ALA SEQRES 13 A 497 ARG TYR GLY PHE ARG CYS CYS HIS LEU LYS ASN ILE TRP SEQRES 14 A 497 THR ALA PRO LEU PRO PRO GLU THR GLU LEU SER ARG GLN SEQRES 15 A 497 MET THR THR SER THR GLY MET ALA PRO VAL THR THR LYS SEQRES 16 A 497 PHE ARG ASP VAL PRO ASN LEU SER GLY THR PRO LEU ILE SEQRES 17 A 497 PHE ARG ASP ASN LYS GLY ARG THR ILE LYS THR GLY GLN SEQRES 18 A 497 LEU GLY ILE GLY PRO VAL ASP ALA GLY PHE LEU VAL ALA SEQRES 19 A 497 GLN ASN THR ALA GLN ALA ALA ASN GLY GLU ARG ALA ILE SEQRES 20 A 497 PRO SER ASN LEU TRP ALA ASP LEU SER ASN ALA THR SER SEQRES 21 A 497 ILE ASP ILE MET GLY LEU GLN ALA ALA TYR ALA ASN LEU SEQRES 22 A 497 HIS THR ASP GLN GLU ARG ASP TYR PHE MET GLN ARG TYR SEQRES 23 A 497 ARG ASP VAL ILE SER SER PHE GLY GLY LYS THR SER TYR SEQRES 24 A 497 ASP ALA ASP ASN ARG PRO LEU LEU VAL MET ARG SER ASN SEQRES 25 A 497 LEU TRP ALA SER GLY TYR ASP VAL ASP GLY THR ASP GLN SEQRES 26 A 497 THR SER LEU GLY GLN PHE SER GLY ARG VAL GLN GLN THR SEQRES 27 A 497 TYR LYS HIS SER VAL PRO ARG PHE PHE VAL PRO GLU HIS SEQRES 28 A 497 GLY THR MET PHE THR LEU ALA LEU VAL ARG PHE PRO PRO SEQRES 29 A 497 THR ALA THR LYS GLU ILE GLN TYR LEU ASN ALA LYS GLY SEQRES 30 A 497 ALA LEU THR TYR THR ASP ILE ALA GLY ASP PRO VAL LEU SEQRES 31 A 497 TYR GLY ASN LEU PRO PRO ARG GLU ILE SER MET LYS ASP SEQRES 32 A 497 VAL PHE ARG SER GLY ASP SER SER LYS LYS PHE LYS ILE SEQRES 33 A 497 ALA GLU GLY GLN TRP TYR ARG TYR ALA PRO SER TYR VAL SEQRES 34 A 497 SER PRO ALA TYR HIS LEU LEU GLU GLY PHE PRO PHE ILE SEQRES 35 A 497 GLN GLU PRO PRO SER GLY ASP LEU GLN GLU ARG VAL LEU SEQRES 36 A 497 ILE ARG HIS HIS ASP TYR ASP GLN CYS PHE GLN SER VAL SEQRES 37 A 497 GLN LEU LEU GLN TRP ASN SER GLN VAL LYS PHE ASN VAL SEQRES 38 A 497 THR VAL TYR ARG ASN LEU PRO THR THR ARG ASP SER ILE SEQRES 39 A 497 MET THR SER CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000