data_1KVZ # _entry.id 1KVZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1KVZ pdb_00001kvz 10.2210/pdb1kvz/pdb RCSB RCSB015390 ? ? WWPDB D_1000015390 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1KVZ _pdbx_database_status.recvd_initial_deposition_date 2002-01-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hsu, C.-H.' 1 'Liao, Y.-D.' 2 'Chen, L.-W.' 3 'Wu, S.-H.' 4 'Chen, C.' 5 # _citation.id primary _citation.title 'Solution Structure of the Cytotoxic RNase 4 from the Oocytes of Bullfrog Rana Catesbeiana' _citation.journal_abbrev J.MOL.BIOL. _citation.journal_volume 326 _citation.page_first 1189 _citation.page_last 1201 _citation.year 2003 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12589762 _citation.pdbx_database_id_DOI '10.1016/S0022-2836(02)01472-9' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hsu, C.-H.' 1 ? primary 'Liao, Y.-D.' 2 ? primary 'Pan, Y.-R.' 3 ? primary 'Chen, L.-W.' 4 ? primary 'Wu, S.-H.' 5 ? primary 'Leu, Y.-J.' 6 ? primary 'Chen, C.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description RC-RNase4 _entity.formula_weight 12236.297 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPVKALCRGVIFSADVLSNSEFYLAECNVKPRKPCKYK LKKSSNRICIRCEHELPVHFAGVGICP ; _entity_poly.pdbx_seq_one_letter_code_can ;MQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPVKALCRGVIFSADVLSNSEFYLAECNVKPRKPCKYK LKKSSNRICIRCEHELPVHFAGVGICP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ASP n 1 4 TRP n 1 5 ALA n 1 6 THR n 1 7 PHE n 1 8 LYS n 1 9 LYS n 1 10 LYS n 1 11 HIS n 1 12 LEU n 1 13 THR n 1 14 ASP n 1 15 THR n 1 16 TRP n 1 17 ASP n 1 18 VAL n 1 19 ASP n 1 20 CYS n 1 21 ASP n 1 22 ASN n 1 23 LEU n 1 24 MET n 1 25 PRO n 1 26 THR n 1 27 SER n 1 28 LEU n 1 29 PHE n 1 30 ASP n 1 31 CYS n 1 32 LYS n 1 33 ASP n 1 34 LYS n 1 35 ASN n 1 36 THR n 1 37 PHE n 1 38 ILE n 1 39 TYR n 1 40 SER n 1 41 LEU n 1 42 PRO n 1 43 GLY n 1 44 PRO n 1 45 VAL n 1 46 LYS n 1 47 ALA n 1 48 LEU n 1 49 CYS n 1 50 ARG n 1 51 GLY n 1 52 VAL n 1 53 ILE n 1 54 PHE n 1 55 SER n 1 56 ALA n 1 57 ASP n 1 58 VAL n 1 59 LEU n 1 60 SER n 1 61 ASN n 1 62 SER n 1 63 GLU n 1 64 PHE n 1 65 TYR n 1 66 LEU n 1 67 ALA n 1 68 GLU n 1 69 CYS n 1 70 ASN n 1 71 VAL n 1 72 LYS n 1 73 PRO n 1 74 ARG n 1 75 LYS n 1 76 PRO n 1 77 CYS n 1 78 LYS n 1 79 TYR n 1 80 LYS n 1 81 LEU n 1 82 LYS n 1 83 LYS n 1 84 SER n 1 85 SER n 1 86 ASN n 1 87 ARG n 1 88 ILE n 1 89 CYS n 1 90 ILE n 1 91 ARG n 1 92 CYS n 1 93 GLU n 1 94 HIS n 1 95 GLU n 1 96 LEU n 1 97 PRO n 1 98 VAL n 1 99 HIS n 1 100 PHE n 1 101 ALA n 1 102 GLY n 1 103 VAL n 1 104 GLY n 1 105 ILE n 1 106 CYS n 1 107 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name bullfrog _entity_src_gen.gene_src_genus Rana _entity_src_gen.pdbx_gene_src_gene Oocytes _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rana catesbeiana' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 8400 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET-11d _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_code Q9DFY6_RANCA _struct_ref.db_name UNP _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q9DFY6 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ;CQDWATFKKKHLTDTWDVDCDNLMPTSLFDCKDKNTFIYSLPGPVKALCRGVIFSADVLSNSEFYLAECNVKPRKPCKYK LKKSSNRICIRCEHELPVHFAGVGICP ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1KVZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 107 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9DFY6 _struct_ref_seq.db_align_beg 23 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 107 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1KVZ _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9DFY6 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 1 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 2 2 3D_15N-separated_NOESY 3 2 2 HNHA # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature_units 1 310 1 3.5 ? atm K 2 310 1 3.5 ? atm K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1.5mM rRC-RNase4 U-15N, 13C; 50mM phosphate buffer; 90% H2O, 10%' '90% H2O/10% D2O' 2 '1.5mM rRC-RNase4 U-15N; 50mM phosphate buffer; 90% H2O, 10%' '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker AVANCE 600 2 ? Bruker AMX 500 # _pdbx_nmr_refine.entry_id 1KVZ _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1KVZ _pdbx_nmr_details.text 'This structure was determined using standard 3D hetreonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1KVZ _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1KVZ _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 processing Bruker 1 AURELIA 2.6 'data analysis' Bruker 2 X-PLOR 98 'structure solution' MSI 3 X-PLOR 98 refinement MSI 4 # _exptl.entry_id 1KVZ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1KVZ _struct.title 'Solution Structure of Cytotoxic RC-RNase4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1KVZ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'antitumor, bullfrog, cytotoxicity, ribonuclease, Structure from MOLMOL, HYDROLASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 3 ? HIS A 11 ? ASP A 3 HIS A 11 1 ? 9 HELX_P HELX_P2 2 ASP A 19 ? MET A 24 ? ASP A 19 MET A 24 1 ? 6 HELX_P HELX_P3 3 LEU A 41 ? ARG A 50 ? LEU A 41 ARG A 50 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 20 SG ? ? ? 1_555 A CYS 69 SG ? ? A CYS 20 A CYS 69 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf2 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 77 SG ? ? A CYS 31 A CYS 77 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf3 disulf ? ? A CYS 49 SG ? ? ? 1_555 A CYS 92 SG ? ? A CYS 49 A CYS 92 1_555 ? ? ? ? ? ? ? 2.017 ? ? disulf4 disulf ? ? A CYS 89 SG ? ? ? 1_555 A CYS 106 SG ? ? A CYS 89 A CYS 106 1_555 ? ? ? ? ? ? ? 2.023 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 12 ? THR A 13 ? LEU A 12 THR A 13 A 2 ILE A 38 ? TYR A 39 ? ILE A 38 TYR A 39 B 1 LYS A 34 ? THR A 36 ? LYS A 34 THR A 36 B 2 PHE A 64 ? VAL A 71 ? PHE A 64 VAL A 71 B 3 TYR A 79 ? ASN A 86 ? TYR A 79 ASN A 86 C 1 ALA A 56 ? LEU A 59 ? ALA A 56 LEU A 59 C 2 ILE A 88 ? GLU A 93 ? ILE A 88 GLU A 93 C 3 LEU A 96 ? VAL A 103 ? LEU A 96 VAL A 103 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 13 ? N THR A 13 O ILE A 38 ? O ILE A 38 B 1 2 N ASN A 35 ? N ASN A 35 O CYS A 69 ? O CYS A 69 B 2 3 N LEU A 66 ? N LEU A 66 O SER A 84 ? O SER A 84 C 1 2 N ALA A 56 ? N ALA A 56 O CYS A 92 ? O CYS A 92 C 2 3 N CYS A 89 ? N CYS A 89 O GLY A 102 ? O GLY A 102 # _database_PDB_matrix.entry_id 1KVZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1KVZ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 TRP 4 4 4 TRP TRP A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 THR 13 13 13 THR THR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 TRP 16 16 16 TRP TRP A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 PHE 29 29 29 PHE PHE A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 CYS 31 31 31 CYS CYS A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 THR 36 36 36 THR THR A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 LYS 46 46 46 LYS LYS A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 CYS 49 49 49 CYS CYS A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 PHE 54 54 54 PHE PHE A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 PHE 64 64 64 PHE PHE A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 CYS 69 69 69 CYS CYS A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 PRO 76 76 76 PRO PRO A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 SER 84 84 84 SER SER A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 CYS 92 92 92 CYS CYS A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 GLU 95 95 95 GLU GLU A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 PRO 97 97 97 PRO PRO A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 HIS 99 99 99 HIS HIS A . n A 1 100 PHE 100 100 100 PHE PHE A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 CYS 106 106 106 CYS CYS A . n A 1 107 PRO 107 107 107 PRO PRO A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-07-28 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-02-23 5 'Structure model' 1 4 2022-12-21 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 5 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 MET _pdbx_validate_close_contact.auth_seq_id_1 24 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 H _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 CYS _pdbx_validate_close_contact.auth_seq_id_2 31 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 31 ? ? 63.66 72.21 2 1 ARG A 50 ? ? -55.06 93.59 3 1 CYS A 77 ? ? 50.12 72.63 4 2 ASP A 30 ? ? 39.81 49.01 5 2 LYS A 32 ? ? -65.85 -176.18 6 2 ARG A 50 ? ? -56.80 93.37 7 2 PRO A 76 ? ? -71.29 -163.84 8 3 GLN A 2 ? ? -143.02 -64.84 9 3 LYS A 32 ? ? -55.05 -178.58 10 3 ARG A 50 ? ? -57.76 91.52 11 3 GLU A 95 ? ? 76.45 37.87 12 4 THR A 26 ? ? -67.77 -173.11 13 4 CYS A 31 ? ? 60.82 69.91 14 4 ARG A 50 ? ? -57.99 96.58 15 5 LYS A 32 ? ? -58.18 -178.91 16 5 ARG A 50 ? ? -57.87 91.69 17 5 PRO A 76 ? ? -71.31 -163.52 18 6 ARG A 50 ? ? -57.67 92.18 19 7 LYS A 32 ? ? -54.70 -173.50 20 7 ARG A 50 ? ? -61.32 89.05 21 8 LYS A 32 ? ? -57.84 -174.06 22 8 ARG A 50 ? ? -57.08 93.67 23 8 GLU A 95 ? ? 74.70 34.85 24 9 LYS A 32 ? ? -61.07 -175.36 25 9 ARG A 50 ? ? -57.93 91.53 26 9 PRO A 76 ? ? -72.63 -162.22 27 10 LYS A 32 ? ? -61.61 -166.76 28 10 ARG A 50 ? ? -54.06 93.23 29 10 ASN A 86 ? ? -171.33 -178.95 30 11 LYS A 32 ? ? -55.52 -176.22 31 11 ARG A 50 ? ? -56.70 93.71 32 12 THR A 26 ? ? -69.30 -179.91 33 12 LYS A 32 ? ? -54.74 174.19 34 12 ARG A 50 ? ? -58.62 95.13 35 13 THR A 15 ? ? -177.46 144.71 36 13 LYS A 32 ? ? -67.26 -173.52 37 13 ASP A 33 ? ? -81.87 -72.70 38 13 ARG A 50 ? ? -55.67 95.54 39 14 ARG A 50 ? ? -60.90 89.88 40 14 ILE A 53 ? ? -133.14 -41.81 41 14 SER A 60 ? ? -49.60 150.69 42 14 LYS A 72 ? ? -49.04 156.02 43 15 CYS A 31 ? ? 64.70 75.76 44 15 ARG A 50 ? ? -55.85 92.48 45 15 CYS A 77 ? ? 44.35 79.47 46 15 GLU A 95 ? ? 73.46 37.79 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 50 ? ? 0.287 'SIDE CHAIN' 2 1 ARG A 74 ? ? 0.216 'SIDE CHAIN' 3 1 ARG A 87 ? ? 0.315 'SIDE CHAIN' 4 1 ARG A 91 ? ? 0.283 'SIDE CHAIN' 5 2 ARG A 50 ? ? 0.258 'SIDE CHAIN' 6 2 ARG A 74 ? ? 0.283 'SIDE CHAIN' 7 2 ARG A 87 ? ? 0.317 'SIDE CHAIN' 8 2 ARG A 91 ? ? 0.292 'SIDE CHAIN' 9 3 ARG A 50 ? ? 0.204 'SIDE CHAIN' 10 3 ARG A 74 ? ? 0.291 'SIDE CHAIN' 11 3 ARG A 87 ? ? 0.274 'SIDE CHAIN' 12 3 ARG A 91 ? ? 0.272 'SIDE CHAIN' 13 4 ARG A 50 ? ? 0.226 'SIDE CHAIN' 14 4 ARG A 74 ? ? 0.302 'SIDE CHAIN' 15 4 ARG A 87 ? ? 0.250 'SIDE CHAIN' 16 4 ARG A 91 ? ? 0.234 'SIDE CHAIN' 17 5 ARG A 50 ? ? 0.292 'SIDE CHAIN' 18 5 ARG A 74 ? ? 0.281 'SIDE CHAIN' 19 5 ARG A 87 ? ? 0.195 'SIDE CHAIN' 20 5 ARG A 91 ? ? 0.312 'SIDE CHAIN' 21 6 ARG A 50 ? ? 0.223 'SIDE CHAIN' 22 6 ARG A 74 ? ? 0.317 'SIDE CHAIN' 23 6 ARG A 87 ? ? 0.256 'SIDE CHAIN' 24 6 ARG A 91 ? ? 0.256 'SIDE CHAIN' 25 7 ARG A 50 ? ? 0.316 'SIDE CHAIN' 26 7 ARG A 74 ? ? 0.283 'SIDE CHAIN' 27 7 ARG A 87 ? ? 0.244 'SIDE CHAIN' 28 7 ARG A 91 ? ? 0.223 'SIDE CHAIN' 29 8 ARG A 50 ? ? 0.230 'SIDE CHAIN' 30 8 ARG A 74 ? ? 0.313 'SIDE CHAIN' 31 8 ARG A 87 ? ? 0.213 'SIDE CHAIN' 32 8 ARG A 91 ? ? 0.313 'SIDE CHAIN' 33 9 ARG A 50 ? ? 0.210 'SIDE CHAIN' 34 9 ARG A 74 ? ? 0.281 'SIDE CHAIN' 35 9 ARG A 87 ? ? 0.313 'SIDE CHAIN' 36 9 ARG A 91 ? ? 0.317 'SIDE CHAIN' 37 10 ARG A 50 ? ? 0.307 'SIDE CHAIN' 38 10 ARG A 74 ? ? 0.266 'SIDE CHAIN' 39 10 ARG A 87 ? ? 0.265 'SIDE CHAIN' 40 10 ARG A 91 ? ? 0.249 'SIDE CHAIN' 41 11 ARG A 50 ? ? 0.245 'SIDE CHAIN' 42 11 ARG A 74 ? ? 0.242 'SIDE CHAIN' 43 11 ARG A 87 ? ? 0.263 'SIDE CHAIN' 44 11 ARG A 91 ? ? 0.214 'SIDE CHAIN' 45 12 ARG A 50 ? ? 0.314 'SIDE CHAIN' 46 12 ARG A 74 ? ? 0.272 'SIDE CHAIN' 47 12 ARG A 87 ? ? 0.216 'SIDE CHAIN' 48 12 ARG A 91 ? ? 0.298 'SIDE CHAIN' 49 13 ARG A 50 ? ? 0.317 'SIDE CHAIN' 50 13 ARG A 74 ? ? 0.281 'SIDE CHAIN' 51 13 ARG A 87 ? ? 0.249 'SIDE CHAIN' 52 13 ARG A 91 ? ? 0.310 'SIDE CHAIN' 53 14 ARG A 50 ? ? 0.291 'SIDE CHAIN' 54 14 ARG A 74 ? ? 0.150 'SIDE CHAIN' 55 14 ARG A 87 ? ? 0.290 'SIDE CHAIN' 56 14 ARG A 91 ? ? 0.301 'SIDE CHAIN' 57 15 ARG A 50 ? ? 0.284 'SIDE CHAIN' 58 15 ARG A 74 ? ? 0.316 'SIDE CHAIN' 59 15 ARG A 87 ? ? 0.308 'SIDE CHAIN' 60 15 ARG A 91 ? ? 0.290 'SIDE CHAIN' #