data_1LB2 # _entry.id 1LB2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1LB2 pdb_00001lb2 10.2210/pdb1lb2/pdb NDB PD0306 ? ? RCSB RCSB015802 ? ? WWPDB D_1000015802 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1LB2 _pdbx_database_status.recvd_initial_deposition_date 2002-04-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Benoff, B.' 1 'Yang, H.' 2 'Lawson, C.L.' 3 'Parkinson, G.' 4 'Liu, J.' 5 'Blatter, E.' 6 'Ebright, Y.W.' 7 'Berman, H.M.' 8 'Ebright, R.H.' 9 # _citation.id primary _citation.title 'Structural basis of transcription activation: the CAP-alpha CTD-DNA complex.' _citation.journal_abbrev Science _citation.journal_volume 297 _citation.page_first 1562 _citation.page_last 1566 _citation.year 2002 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12202833 _citation.pdbx_database_id_DOI 10.1126/science.1076376 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Benoff, B.' 1 ? primary 'Yang, H.' 2 ? primary 'Lawson, C.L.' 3 ? primary 'Parkinson, G.' 4 ? primary 'Liu, J.' 5 ? primary 'Blatter, E.' 6 ? primary 'Ebright, Y.W.' 7 ? primary 'Berman, H.M.' 8 ? primary 'Ebright, R.H.' 9 ? # _cell.entry_id 1LB2 _cell.length_a 175.970 _cell.length_b 175.970 _cell.length_c 158.020 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1LB2 _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*TP*TP*TP*TP*TP*TP*CP*CP*TP*AP*AP*AP*AP*TP*GP*TP*GP*AP*T)-3'" 6088.962 1 ? ? ? ? 2 polymer syn "5'-D(*CP*TP*AP*GP*AP*TP*CP*AP*CP*AP*TP*TP*TP*TP*AP*GP*GP*AP*AP*AP*AP*AP*AP*G)-3'" 7409.844 1 ? ? ? ? 3 polymer man 'CATABOLITE GENE ACTIVATOR PROTEIN' 23541.242 1 ? ? ? ? 4 polymer man 'DNA-directed RNA polymerase alpha chain' 9364.795 2 2.7.7.6 ? 'alpha CTD, alpha Carboxy terminal domain' ? 5 non-polymer syn "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 329.206 1 ? ? ? ? 6 water nat water 18.015 32 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 3 'CAP, cAMP receptor protein, cAMP-regulatory protein' 4 'Transcriptase alpha chain, RNA polymerase alpha subunit' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DC)(DT)(DA)(DA)(DA)(DA)(DT)(DG)(DT)(DG)(DA)(DT)' CTTTTTTCCTAAAATGTGAT K ? 2 polydeoxyribonucleotide no no ;(DC)(DT)(DA)(DG)(DA)(DT)(DC)(DA)(DC)(DA)(DT)(DT)(DT)(DT)(DA)(DG)(DG)(DA)(DA)(DA) (DA)(DA)(DA)(DG) ; CTAGATCACATTTTAGGAAAAAAG J ? 3 'polypeptide(L)' no no ;VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQ ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHP DGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR ; ;VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQ ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHP DGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR ; A ? 4 'polypeptide(L)' no no ;KPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS IADE ; ;KPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS IADE ; B,E ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DT n 1 4 DT n 1 5 DT n 1 6 DT n 1 7 DT n 1 8 DC n 1 9 DC n 1 10 DT n 1 11 DA n 1 12 DA n 1 13 DA n 1 14 DA n 1 15 DT n 1 16 DG n 1 17 DT n 1 18 DG n 1 19 DA n 1 20 DT n 2 1 DC n 2 2 DT n 2 3 DA n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DC n 2 8 DA n 2 9 DC n 2 10 DA n 2 11 DT n 2 12 DT n 2 13 DT n 2 14 DT n 2 15 DA n 2 16 DG n 2 17 DG n 2 18 DA n 2 19 DA n 2 20 DA n 2 21 DA n 2 22 DA n 2 23 DA n 2 24 DG n 3 1 VAL n 3 2 LEU n 3 3 GLY n 3 4 LYS n 3 5 PRO n 3 6 GLN n 3 7 THR n 3 8 ASP n 3 9 PRO n 3 10 THR n 3 11 LEU n 3 12 GLU n 3 13 TRP n 3 14 PHE n 3 15 LEU n 3 16 SER n 3 17 HIS n 3 18 CYS n 3 19 HIS n 3 20 ILE n 3 21 HIS n 3 22 LYS n 3 23 TYR n 3 24 PRO n 3 25 SER n 3 26 LYS n 3 27 SER n 3 28 THR n 3 29 LEU n 3 30 ILE n 3 31 HIS n 3 32 GLN n 3 33 GLY n 3 34 GLU n 3 35 LYS n 3 36 ALA n 3 37 GLU n 3 38 THR n 3 39 LEU n 3 40 TYR n 3 41 TYR n 3 42 ILE n 3 43 VAL n 3 44 LYS n 3 45 GLY n 3 46 SER n 3 47 VAL n 3 48 ALA n 3 49 VAL n 3 50 LEU n 3 51 ILE n 3 52 LYS n 3 53 ASP n 3 54 GLU n 3 55 GLU n 3 56 GLY n 3 57 LYS n 3 58 GLU n 3 59 MET n 3 60 ILE n 3 61 LEU n 3 62 SER n 3 63 TYR n 3 64 LEU n 3 65 ASN n 3 66 GLN n 3 67 GLY n 3 68 ASP n 3 69 PHE n 3 70 ILE n 3 71 GLY n 3 72 GLU n 3 73 LEU n 3 74 GLY n 3 75 LEU n 3 76 PHE n 3 77 GLU n 3 78 GLU n 3 79 GLY n 3 80 GLN n 3 81 GLU n 3 82 ARG n 3 83 SER n 3 84 ALA n 3 85 TRP n 3 86 VAL n 3 87 ARG n 3 88 ALA n 3 89 LYS n 3 90 THR n 3 91 ALA n 3 92 CYS n 3 93 GLU n 3 94 VAL n 3 95 ALA n 3 96 GLU n 3 97 ILE n 3 98 SER n 3 99 TYR n 3 100 LYS n 3 101 LYS n 3 102 PHE n 3 103 ARG n 3 104 GLN n 3 105 LEU n 3 106 ILE n 3 107 GLN n 3 108 VAL n 3 109 ASN n 3 110 PRO n 3 111 ASP n 3 112 ILE n 3 113 LEU n 3 114 MET n 3 115 ARG n 3 116 LEU n 3 117 SER n 3 118 ALA n 3 119 GLN n 3 120 MET n 3 121 ALA n 3 122 ARG n 3 123 ARG n 3 124 LEU n 3 125 GLN n 3 126 VAL n 3 127 THR n 3 128 SER n 3 129 GLU n 3 130 LYS n 3 131 VAL n 3 132 GLY n 3 133 ASN n 3 134 LEU n 3 135 ALA n 3 136 PHE n 3 137 LEU n 3 138 ASP n 3 139 VAL n 3 140 THR n 3 141 GLY n 3 142 ARG n 3 143 ILE n 3 144 ALA n 3 145 GLN n 3 146 THR n 3 147 LEU n 3 148 LEU n 3 149 ASN n 3 150 LEU n 3 151 ALA n 3 152 LYS n 3 153 GLN n 3 154 PRO n 3 155 ASP n 3 156 ALA n 3 157 MET n 3 158 THR n 3 159 HIS n 3 160 PRO n 3 161 ASP n 3 162 GLY n 3 163 MET n 3 164 GLN n 3 165 ILE n 3 166 LYS n 3 167 ILE n 3 168 THR n 3 169 ARG n 3 170 GLN n 3 171 GLU n 3 172 ILE n 3 173 GLY n 3 174 GLN n 3 175 ILE n 3 176 VAL n 3 177 GLY n 3 178 CYS n 3 179 SER n 3 180 ARG n 3 181 GLU n 3 182 THR n 3 183 VAL n 3 184 GLY n 3 185 ARG n 3 186 ILE n 3 187 LEU n 3 188 LYS n 3 189 MET n 3 190 LEU n 3 191 GLU n 3 192 ASP n 3 193 GLN n 3 194 ASN n 3 195 LEU n 3 196 ILE n 3 197 SER n 3 198 ALA n 3 199 HIS n 3 200 GLY n 3 201 LYS n 3 202 THR n 3 203 ILE n 3 204 VAL n 3 205 VAL n 3 206 TYR n 3 207 GLY n 3 208 THR n 3 209 ARG n 4 1 LYS n 4 2 PRO n 4 3 GLU n 4 4 PHE n 4 5 ASP n 4 6 PRO n 4 7 ILE n 4 8 LEU n 4 9 LEU n 4 10 ARG n 4 11 PRO n 4 12 VAL n 4 13 ASP n 4 14 ASP n 4 15 LEU n 4 16 GLU n 4 17 LEU n 4 18 THR n 4 19 VAL n 4 20 ARG n 4 21 SER n 4 22 ALA n 4 23 ASN n 4 24 CYS n 4 25 LEU n 4 26 LYS n 4 27 ALA n 4 28 GLU n 4 29 ALA n 4 30 ILE n 4 31 HIS n 4 32 TYR n 4 33 ILE n 4 34 GLY n 4 35 ASP n 4 36 LEU n 4 37 VAL n 4 38 GLN n 4 39 ARG n 4 40 THR n 4 41 GLU n 4 42 VAL n 4 43 GLU n 4 44 LEU n 4 45 LEU n 4 46 LYS n 4 47 THR n 4 48 PRO n 4 49 ASN n 4 50 LEU n 4 51 GLY n 4 52 LYS n 4 53 LYS n 4 54 SER n 4 55 LEU n 4 56 THR n 4 57 GLU n 4 58 ILE n 4 59 LYS n 4 60 ASP n 4 61 VAL n 4 62 LEU n 4 63 ALA n 4 64 SER n 4 65 ARG n 4 66 GLY n 4 67 LEU n 4 68 SER n 4 69 LEU n 4 70 GLY n 4 71 MET n 4 72 ARG n 4 73 LEU n 4 74 GLU n 4 75 ASN n 4 76 TRP n 4 77 PRO n 4 78 PRO n 4 79 ALA n 4 80 SER n 4 81 ILE n 4 82 ALA n 4 83 ASP n 4 84 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 3 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? ? Escherichia ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP CRP_ECOLI 3 ;VLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQ ERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHP DGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR ; 2 P0ACJ8 ? 2 UNP RPOA_ECOLI 4 ;KPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS IADE ; 246 P0A7Z4 ? 3 PDB 1LB2 1 ? ? 1LB2 ? 4 PDB 1LB2 2 ? ? 1LB2 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1LB2 A 1 ? 209 ? P0ACJ8 2 ? 210 ? 1 209 2 2 1LB2 B 1 ? 84 ? P0A7Z4 246 ? 329 ? 246 329 3 2 1LB2 E 1 ? 84 ? P0A7Z4 246 ? 329 ? 246 329 4 3 1LB2 K 1 ? 20 ? 1LB2 33 ? 14 ? 33 14 5 4 1LB2 J 1 ? 24 ? 1LB2 10 ? 33 ? 10 33 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CMP non-polymer . "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" 'CYCLIC AMP; CAMP' 'C10 H12 N5 O6 P' 329.206 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1LB2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 78 _exptl_crystal.density_Matthews 6.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'NaCl, NaAcetate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 NaCl ? ? ? 1 2 1 'Na(C2H3O2)' ? ? ? 1 3 2 NaCl ? ? ? 1 4 2 'Na(C2H3O2)' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRANDEIS - B4' _diffrn_detector.pdbx_collection_date 2001-07-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1LB2 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 20 _reflns.d_resolution_high 3.1 _reflns.number_obs 23331 _reflns.number_all 23331 _reflns.percent_possible_obs 88 _reflns.pdbx_Rmerge_I_obs 0.076 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate 81.5 _reflns.pdbx_redundancy 15.3 _reflns.R_free_details ? _reflns.limit_h_min ? _reflns.observed_criterion_F_max ? _reflns.limit_h_max ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.1 _reflns_shell.d_res_low 3.21 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 38.5 _reflns_shell.Rmerge_I_obs 0.516 _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1LB2 _refine.ls_number_reflns_obs 23331 _refine.ls_number_reflns_all 23331 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 3.1 _refine.ls_percent_reflns_obs 87.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.211 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2304 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 104.2 _refine.aniso_B[1][1] 16.45 _refine.aniso_B[2][2] 16.45 _refine.aniso_B[3][3] -32.90 _refine.aniso_B[1][2] 17.05 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'flat model' _refine.solvent_model_param_ksol 0.272486 _refine.solvent_model_param_bsol 47.7314 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 2CGP _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT AND FOURIER SYNTHESIS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1LB2 _refine_analyze.Luzzati_coordinate_error_obs 0.48 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.53 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_sigma_a_obs 0.79 _refine_analyze.Luzzati_sigma_a_free 0.83 _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2663 _refine_hist.pdbx_number_atoms_nucleic_acid 896 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 32 _refine_hist.number_atoms_total 3613 _refine_hist.d_res_high 3.1 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 21.2 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.03 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.R_factor_R_free 0.475 _refine_ls_shell.R_factor_R_free_error 0.035 _refine_ls_shell.R_factor_R_work 0.448 _refine_ls_shell.d_res_high 3.1 _refine_ls_shell.d_res_low 3.29 _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.number_reflns_R_free 182 _refine_ls_shell.number_reflns_R_work 1705 _refine_ls_shell.percent_reflns_R_free 9.6 _refine_ls_shell.percent_reflns_obs 43.4 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein_rep.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna_rep.top 'X-RAY DIFFRACTION' 3 cmp.param cmp.top 'X-RAY DIFFRACTION' 4 water_rep.param water_rep.top 'X-RAY DIFFRACTION' # _struct.entry_id 1LB2 _struct.title 'Structure of the E. coli alpha C-terminal domain of RNA polymerase in complex with CAP and DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1LB2 _struct_keywords.pdbx_keywords 'GENE REGULATION/DNA' _struct_keywords.text 'PROTEIN-DNA COMPLEX, GENE-REGULATORY, GENE REGULATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO C 9 ? SER C 16 ? PRO A 9 SER A 16 1 ? 8 HELX_P HELX_P2 2 GLU C 72 ? PHE C 76 ? GLU A 72 PHE A 76 5 ? 5 HELX_P HELX_P3 3 TYR C 99 ? ASN C 109 ? TYR A 99 ASN A 109 1 ? 11 HELX_P HELX_P4 4 PRO C 110 ? LEU C 137 ? PRO A 110 LEU A 137 1 ? 28 HELX_P HELX_P5 5 ASP C 138 ? GLN C 153 ? ASP A 138 GLN A 153 1 ? 16 HELX_P HELX_P6 6 THR C 168 ? GLY C 177 ? THR A 168 GLY A 177 1 ? 10 HELX_P HELX_P7 7 SER C 179 ? GLN C 193 ? SER A 179 GLN A 193 1 ? 15 HELX_P HELX_P8 8 PRO D 11 ? GLU D 16 ? PRO B 256 GLU B 261 5 ? 6 HELX_P HELX_P9 9 THR D 18 ? GLU D 28 ? THR B 263 GLU B 273 1 ? 11 HELX_P HELX_P10 10 TYR D 32 ? GLN D 38 ? TYR B 277 GLN B 283 1 ? 7 HELX_P HELX_P11 11 THR D 40 ? THR D 47 ? THR B 285 THR B 292 1 ? 8 HELX_P HELX_P12 12 GLY D 51 ? ARG D 65 ? GLY B 296 ARG B 310 1 ? 15 HELX_P HELX_P13 13 PRO E 6 ? ARG E 10 ? PRO E 251 ARG E 255 5 ? 5 HELX_P HELX_P14 14 PRO E 11 ? GLU E 16 ? PRO E 256 GLU E 261 5 ? 6 HELX_P HELX_P15 15 THR E 18 ? ALA E 27 ? THR E 263 ALA E 272 1 ? 10 HELX_P HELX_P16 16 TYR E 32 ? GLN E 38 ? TYR E 277 GLN E 283 1 ? 7 HELX_P HELX_P17 17 THR E 40 ? LYS E 46 ? THR E 285 LYS E 291 1 ? 7 HELX_P HELX_P18 18 GLY E 51 ? ARG E 65 ? GLY E 296 ARG E 310 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 24 N1 ? ? K DC 33 J DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 24 O6 ? ? K DC 33 J DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 24 N2 ? ? K DC 33 J DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 23 N1 ? ? K DT 32 J DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 23 N6 ? ? K DT 32 J DA 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 22 N1 ? ? K DT 31 J DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 22 N6 ? ? K DT 31 J DA 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 21 N1 ? ? K DT 30 J DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 21 N6 ? ? K DT 30 J DA 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 20 N1 ? ? K DT 29 J DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 20 N6 ? ? K DT 29 J DA 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 19 N1 ? ? K DT 28 J DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 19 N6 ? ? K DT 28 J DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 18 N1 ? ? K DT 27 J DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 18 N6 ? ? K DT 27 J DA 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 17 N1 ? ? K DC 26 J DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 17 O6 ? ? K DC 26 J DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 17 N2 ? ? K DC 26 J DG 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 16 N1 ? ? K DC 25 J DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 16 O6 ? ? K DC 25 J DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 16 N2 ? ? K DC 25 J DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 15 N1 ? ? K DT 24 J DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 15 N6 ? ? K DT 24 J DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 14 N3 ? ? K DA 23 J DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 14 O4 ? ? K DA 23 J DT 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 12 N1 ? ? ? 1_555 B DT 13 N3 ? ? K DA 22 J DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DA 12 N6 ? ? ? 1_555 B DT 13 O4 ? ? K DA 22 J DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DA 13 N1 ? ? ? 1_555 B DT 12 N3 ? ? K DA 21 J DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 13 N6 ? ? ? 1_555 B DT 12 O4 ? ? K DA 21 J DT 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 11 N3 ? ? K DA 20 J DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 11 O4 ? ? K DA 20 J DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 15 N3 ? ? ? 1_555 B DA 10 N1 ? ? K DT 19 J DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 15 O4 ? ? ? 1_555 B DA 10 N6 ? ? K DT 19 J DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 9 N3 ? ? K DG 18 J DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 9 O2 ? ? K DG 18 J DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 9 N4 ? ? K DG 18 J DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DT 17 N3 ? ? ? 1_555 B DA 8 N1 ? ? K DT 17 J DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 17 O4 ? ? ? 1_555 B DA 8 N6 ? ? K DT 17 J DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 18 N1 ? ? ? 1_555 B DC 7 N3 ? ? K DG 16 J DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DG 18 N2 ? ? ? 1_555 B DC 7 O2 ? ? K DG 16 J DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 18 O6 ? ? ? 1_555 B DC 7 N4 ? ? K DG 16 J DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DA 19 N1 ? ? ? 1_555 B DT 6 N3 ? ? K DA 15 J DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DA 19 N6 ? ? ? 1_555 B DT 6 O4 ? ? K DA 15 J DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DT 20 N3 ? ? ? 1_555 B DA 5 N1 ? ? K DT 14 J DA 14 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS C 19 ? TYR C 23 ? HIS A 19 TYR A 23 A 2 CYS C 92 ? SER C 98 ? CYS A 92 SER A 98 A 3 THR C 38 ? LYS C 44 ? THR A 38 LYS A 44 A 4 PHE C 69 ? ILE C 70 ? PHE A 69 ILE A 70 B 1 THR C 28 ? ILE C 30 ? THR A 28 ILE A 30 B 2 TRP C 85 ? ALA C 88 ? TRP A 85 ALA A 88 B 3 VAL C 47 ? LYS C 52 ? VAL A 47 LYS A 52 B 4 GLU C 58 ? LEU C 64 ? GLU A 58 LEU A 64 C 1 MET C 157 ? HIS C 159 ? MET A 157 HIS A 159 C 2 GLY C 162 ? LYS C 166 ? GLY A 162 LYS A 166 C 3 THR C 202 ? TYR C 206 ? THR A 202 TYR A 206 C 4 ILE C 196 ? HIS C 199 ? ILE A 196 HIS A 199 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS C 19 ? N HIS A 19 O GLU C 96 ? O GLU A 96 A 2 3 O ALA C 95 ? O ALA A 95 N TYR C 41 ? N TYR A 41 A 3 4 N TYR C 40 ? N TYR A 40 O ILE C 70 ? O ILE A 70 B 1 2 N ILE C 30 ? N ILE A 30 O VAL C 86 ? O VAL A 86 B 2 3 O ARG C 87 ? O ARG A 87 N ALA C 48 ? N ALA A 48 B 3 4 N VAL C 49 ? N VAL A 49 O SER C 62 ? O SER A 62 C 1 2 N HIS C 159 ? N HIS A 159 O GLY C 162 ? O GLY A 162 C 2 3 N ILE C 165 ? N ILE A 165 O ILE C 203 ? O ILE A 203 C 3 4 O THR C 202 ? O THR A 202 N HIS C 199 ? N HIS A 199 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id CMP _struct_site.pdbx_auth_seq_id 679 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE CMP A 679' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 ILE C 30 ? ILE A 30 . ? 1_555 ? 2 AC1 13 VAL C 49 ? VAL A 49 . ? 1_555 ? 3 AC1 13 LEU C 61 ? LEU A 61 . ? 1_555 ? 4 AC1 13 ILE C 70 ? ILE A 70 . ? 1_555 ? 5 AC1 13 GLY C 71 ? GLY A 71 . ? 1_555 ? 6 AC1 13 GLU C 72 ? GLU A 72 . ? 1_555 ? 7 AC1 13 LEU C 73 ? LEU A 73 . ? 1_555 ? 8 AC1 13 ARG C 82 ? ARG A 82 . ? 1_555 ? 9 AC1 13 SER C 83 ? SER A 83 . ? 1_555 ? 10 AC1 13 ALA C 84 ? ALA A 84 . ? 1_555 ? 11 AC1 13 TYR C 99 ? TYR A 99 . ? 1_555 ? 12 AC1 13 THR C 127 ? THR A 127 . ? 1_555 ? 13 AC1 13 SER C 128 ? SER A 128 . ? 11_555 ? # _database_PDB_matrix.entry_id 1LB2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1LB2 _atom_sites.fract_transf_matrix[1][1] 0.005683 _atom_sites.fract_transf_matrix[1][2] 0.003281 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006562 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006328 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 33 33 DC C K . n A 1 2 DT 2 32 32 DT T K . n A 1 3 DT 3 31 31 DT T K . n A 1 4 DT 4 30 30 DT T K . n A 1 5 DT 5 29 29 DT T K . n A 1 6 DT 6 28 28 DT T K . n A 1 7 DT 7 27 27 DT T K . n A 1 8 DC 8 26 26 DC C K . n A 1 9 DC 9 25 25 DC C K . n A 1 10 DT 10 24 24 DT T K . n A 1 11 DA 11 23 23 DA A K . n A 1 12 DA 12 22 22 DA A K . n A 1 13 DA 13 21 21 DA A K . n A 1 14 DA 14 20 20 DA A K . n A 1 15 DT 15 19 19 DT T K . n A 1 16 DG 16 18 18 DG G K . n A 1 17 DT 17 17 17 DT T K . n A 1 18 DG 18 16 16 DG G K . n A 1 19 DA 19 15 15 DA A K . n A 1 20 DT 20 14 14 DT T K . n B 2 1 DC 1 10 10 DC C J . n B 2 2 DT 2 11 11 DT T J . n B 2 3 DA 3 12 12 DA A J . n B 2 4 DG 4 13 13 DG G J . n B 2 5 DA 5 14 14 DA A J . n B 2 6 DT 6 15 15 DT T J . n B 2 7 DC 7 16 16 DC C J . n B 2 8 DA 8 17 17 DA A J . n B 2 9 DC 9 18 18 DC C J . n B 2 10 DA 10 19 19 DA A J . n B 2 11 DT 11 20 20 DT T J . n B 2 12 DT 12 21 21 DT T J . n B 2 13 DT 13 22 22 DT T J . n B 2 14 DT 14 23 23 DT T J . n B 2 15 DA 15 24 24 DA A J . n B 2 16 DG 16 25 25 DG G J . n B 2 17 DG 17 26 26 DG G J . n B 2 18 DA 18 27 27 DA A J . n B 2 19 DA 19 28 28 DA A J . n B 2 20 DA 20 29 29 DA A J . n B 2 21 DA 21 30 30 DA A J . n B 2 22 DA 22 31 31 DA A J . n B 2 23 DA 23 32 32 DA A J . n B 2 24 DG 24 33 33 DG G J . n C 3 1 VAL 1 1 ? ? ? A . n C 3 2 LEU 2 2 ? ? ? A . n C 3 3 GLY 3 3 ? ? ? A . n C 3 4 LYS 4 4 ? ? ? A . n C 3 5 PRO 5 5 ? ? ? A . n C 3 6 GLN 6 6 ? ? ? A . n C 3 7 THR 7 7 ? ? ? A . n C 3 8 ASP 8 8 ? ? ? A . n C 3 9 PRO 9 9 9 PRO PRO A . n C 3 10 THR 10 10 10 THR THR A . n C 3 11 LEU 11 11 11 LEU LEU A . n C 3 12 GLU 12 12 12 GLU GLU A . n C 3 13 TRP 13 13 13 TRP TRP A . n C 3 14 PHE 14 14 14 PHE PHE A . n C 3 15 LEU 15 15 15 LEU LEU A . n C 3 16 SER 16 16 16 SER SER A . n C 3 17 HIS 17 17 17 HIS HIS A . n C 3 18 CYS 18 18 18 CYS CYS A . n C 3 19 HIS 19 19 19 HIS HIS A . n C 3 20 ILE 20 20 20 ILE ILE A . n C 3 21 HIS 21 21 21 HIS HIS A . n C 3 22 LYS 22 22 22 LYS LYS A . n C 3 23 TYR 23 23 23 TYR TYR A . n C 3 24 PRO 24 24 24 PRO PRO A . n C 3 25 SER 25 25 25 SER SER A . n C 3 26 LYS 26 26 26 LYS LYS A . n C 3 27 SER 27 27 27 SER SER A . n C 3 28 THR 28 28 28 THR THR A . n C 3 29 LEU 29 29 29 LEU LEU A . n C 3 30 ILE 30 30 30 ILE ILE A . n C 3 31 HIS 31 31 31 HIS HIS A . n C 3 32 GLN 32 32 32 GLN GLN A . n C 3 33 GLY 33 33 33 GLY GLY A . n C 3 34 GLU 34 34 34 GLU GLU A . n C 3 35 LYS 35 35 35 LYS LYS A . n C 3 36 ALA 36 36 36 ALA ALA A . n C 3 37 GLU 37 37 37 GLU GLU A . n C 3 38 THR 38 38 38 THR THR A . n C 3 39 LEU 39 39 39 LEU LEU A . n C 3 40 TYR 40 40 40 TYR TYR A . n C 3 41 TYR 41 41 41 TYR TYR A . n C 3 42 ILE 42 42 42 ILE ILE A . n C 3 43 VAL 43 43 43 VAL VAL A . n C 3 44 LYS 44 44 44 LYS LYS A . n C 3 45 GLY 45 45 45 GLY GLY A . n C 3 46 SER 46 46 46 SER SER A . n C 3 47 VAL 47 47 47 VAL VAL A . n C 3 48 ALA 48 48 48 ALA ALA A . n C 3 49 VAL 49 49 49 VAL VAL A . n C 3 50 LEU 50 50 50 LEU LEU A . n C 3 51 ILE 51 51 51 ILE ILE A . n C 3 52 LYS 52 52 52 LYS LYS A . n C 3 53 ASP 53 53 53 ASP ASP A . n C 3 54 GLU 54 54 54 GLU GLU A . n C 3 55 GLU 55 55 55 GLU GLU A . n C 3 56 GLY 56 56 56 GLY GLY A . n C 3 57 LYS 57 57 57 LYS LYS A . n C 3 58 GLU 58 58 58 GLU GLU A . n C 3 59 MET 59 59 59 MET MET A . n C 3 60 ILE 60 60 60 ILE ILE A . n C 3 61 LEU 61 61 61 LEU LEU A . n C 3 62 SER 62 62 62 SER SER A . n C 3 63 TYR 63 63 63 TYR TYR A . n C 3 64 LEU 64 64 64 LEU LEU A . n C 3 65 ASN 65 65 65 ASN ASN A . n C 3 66 GLN 66 66 66 GLN GLN A . n C 3 67 GLY 67 67 67 GLY GLY A . n C 3 68 ASP 68 68 68 ASP ASP A . n C 3 69 PHE 69 69 69 PHE PHE A . n C 3 70 ILE 70 70 70 ILE ILE A . n C 3 71 GLY 71 71 71 GLY GLY A . n C 3 72 GLU 72 72 72 GLU GLU A . n C 3 73 LEU 73 73 73 LEU LEU A . n C 3 74 GLY 74 74 74 GLY GLY A . n C 3 75 LEU 75 75 75 LEU LEU A . n C 3 76 PHE 76 76 76 PHE PHE A . n C 3 77 GLU 77 77 77 GLU GLU A . n C 3 78 GLU 78 78 78 GLU GLU A . n C 3 79 GLY 79 79 79 GLY GLY A . n C 3 80 GLN 80 80 80 GLN GLN A . n C 3 81 GLU 81 81 81 GLU GLU A . n C 3 82 ARG 82 82 82 ARG ARG A . n C 3 83 SER 83 83 83 SER SER A . n C 3 84 ALA 84 84 84 ALA ALA A . n C 3 85 TRP 85 85 85 TRP TRP A . n C 3 86 VAL 86 86 86 VAL VAL A . n C 3 87 ARG 87 87 87 ARG ARG A . n C 3 88 ALA 88 88 88 ALA ALA A . n C 3 89 LYS 89 89 89 LYS LYS A . n C 3 90 THR 90 90 90 THR THR A . n C 3 91 ALA 91 91 91 ALA ALA A . n C 3 92 CYS 92 92 92 CYS CYS A . n C 3 93 GLU 93 93 93 GLU GLU A . n C 3 94 VAL 94 94 94 VAL VAL A . n C 3 95 ALA 95 95 95 ALA ALA A . n C 3 96 GLU 96 96 96 GLU GLU A . n C 3 97 ILE 97 97 97 ILE ILE A . n C 3 98 SER 98 98 98 SER SER A . n C 3 99 TYR 99 99 99 TYR TYR A . n C 3 100 LYS 100 100 100 LYS LYS A . n C 3 101 LYS 101 101 101 LYS LYS A . n C 3 102 PHE 102 102 102 PHE PHE A . n C 3 103 ARG 103 103 103 ARG ARG A . n C 3 104 GLN 104 104 104 GLN GLN A . n C 3 105 LEU 105 105 105 LEU LEU A . n C 3 106 ILE 106 106 106 ILE ILE A . n C 3 107 GLN 107 107 107 GLN GLN A . n C 3 108 VAL 108 108 108 VAL VAL A . n C 3 109 ASN 109 109 109 ASN ASN A . n C 3 110 PRO 110 110 110 PRO PRO A . n C 3 111 ASP 111 111 111 ASP ASP A . n C 3 112 ILE 112 112 112 ILE ILE A . n C 3 113 LEU 113 113 113 LEU LEU A . n C 3 114 MET 114 114 114 MET MET A . n C 3 115 ARG 115 115 115 ARG ARG A . n C 3 116 LEU 116 116 116 LEU LEU A . n C 3 117 SER 117 117 117 SER SER A . n C 3 118 ALA 118 118 118 ALA ALA A . n C 3 119 GLN 119 119 119 GLN GLN A . n C 3 120 MET 120 120 120 MET MET A . n C 3 121 ALA 121 121 121 ALA ALA A . n C 3 122 ARG 122 122 122 ARG ARG A . n C 3 123 ARG 123 123 123 ARG ARG A . n C 3 124 LEU 124 124 124 LEU LEU A . n C 3 125 GLN 125 125 125 GLN GLN A . n C 3 126 VAL 126 126 126 VAL VAL A . n C 3 127 THR 127 127 127 THR THR A . n C 3 128 SER 128 128 128 SER SER A . n C 3 129 GLU 129 129 129 GLU GLU A . n C 3 130 LYS 130 130 130 LYS LYS A . n C 3 131 VAL 131 131 131 VAL VAL A . n C 3 132 GLY 132 132 132 GLY GLY A . n C 3 133 ASN 133 133 133 ASN ASN A . n C 3 134 LEU 134 134 134 LEU LEU A . n C 3 135 ALA 135 135 135 ALA ALA A . n C 3 136 PHE 136 136 136 PHE PHE A . n C 3 137 LEU 137 137 137 LEU LEU A . n C 3 138 ASP 138 138 138 ASP ASP A . n C 3 139 VAL 139 139 139 VAL VAL A . n C 3 140 THR 140 140 140 THR THR A . n C 3 141 GLY 141 141 141 GLY GLY A . n C 3 142 ARG 142 142 142 ARG ARG A . n C 3 143 ILE 143 143 143 ILE ILE A . n C 3 144 ALA 144 144 144 ALA ALA A . n C 3 145 GLN 145 145 145 GLN GLN A . n C 3 146 THR 146 146 146 THR THR A . n C 3 147 LEU 147 147 147 LEU LEU A . n C 3 148 LEU 148 148 148 LEU LEU A . n C 3 149 ASN 149 149 149 ASN ASN A . n C 3 150 LEU 150 150 150 LEU LEU A . n C 3 151 ALA 151 151 151 ALA ALA A . n C 3 152 LYS 152 152 152 LYS LYS A . n C 3 153 GLN 153 153 153 GLN GLN A . n C 3 154 PRO 154 154 154 PRO PRO A . n C 3 155 ASP 155 155 155 ASP ASP A . n C 3 156 ALA 156 156 156 ALA ALA A . n C 3 157 MET 157 157 157 MET MET A . n C 3 158 THR 158 158 158 THR THR A . n C 3 159 HIS 159 159 159 HIS HIS A . n C 3 160 PRO 160 160 160 PRO PRO A . n C 3 161 ASP 161 161 161 ASP ASP A . n C 3 162 GLY 162 162 162 GLY GLY A . n C 3 163 MET 163 163 163 MET MET A . n C 3 164 GLN 164 164 164 GLN GLN A . n C 3 165 ILE 165 165 165 ILE ILE A . n C 3 166 LYS 166 166 166 LYS LYS A . n C 3 167 ILE 167 167 167 ILE ILE A . n C 3 168 THR 168 168 168 THR THR A . n C 3 169 ARG 169 169 169 ARG ARG A . n C 3 170 GLN 170 170 170 GLN GLN A . n C 3 171 GLU 171 171 171 GLU GLU A . n C 3 172 ILE 172 172 172 ILE ILE A . n C 3 173 GLY 173 173 173 GLY GLY A . n C 3 174 GLN 174 174 174 GLN GLN A . n C 3 175 ILE 175 175 175 ILE ILE A . n C 3 176 VAL 176 176 176 VAL VAL A . n C 3 177 GLY 177 177 177 GLY GLY A . n C 3 178 CYS 178 178 178 CYS CYS A . n C 3 179 SER 179 179 179 SER SER A . n C 3 180 ARG 180 180 180 ARG ARG A . n C 3 181 GLU 181 181 181 GLU GLU A . n C 3 182 THR 182 182 182 THR THR A . n C 3 183 VAL 183 183 183 VAL VAL A . n C 3 184 GLY 184 184 184 GLY GLY A . n C 3 185 ARG 185 185 185 ARG ARG A . n C 3 186 ILE 186 186 186 ILE ILE A . n C 3 187 LEU 187 187 187 LEU LEU A . n C 3 188 LYS 188 188 188 LYS LYS A . n C 3 189 MET 189 189 189 MET MET A . n C 3 190 LEU 190 190 190 LEU LEU A . n C 3 191 GLU 191 191 191 GLU GLU A . n C 3 192 ASP 192 192 192 ASP ASP A . n C 3 193 GLN 193 193 193 GLN GLN A . n C 3 194 ASN 194 194 194 ASN ASN A . n C 3 195 LEU 195 195 195 LEU LEU A . n C 3 196 ILE 196 196 196 ILE ILE A . n C 3 197 SER 197 197 197 SER SER A . n C 3 198 ALA 198 198 198 ALA ALA A . n C 3 199 HIS 199 199 199 HIS HIS A . n C 3 200 GLY 200 200 200 GLY GLY A . n C 3 201 LYS 201 201 201 LYS LYS A . n C 3 202 THR 202 202 202 THR THR A . n C 3 203 ILE 203 203 203 ILE ILE A . n C 3 204 VAL 204 204 204 VAL VAL A . n C 3 205 VAL 205 205 205 VAL VAL A . n C 3 206 TYR 206 206 206 TYR TYR A . n C 3 207 GLY 207 207 207 GLY GLY A . n C 3 208 THR 208 208 208 THR THR A . n C 3 209 ARG 209 209 209 ARG ARG A . n D 4 1 LYS 1 246 ? ? ? B . n D 4 2 PRO 2 247 ? ? ? B . n D 4 3 GLU 3 248 ? ? ? B . n D 4 4 PHE 4 249 ? ? ? B . n D 4 5 ASP 5 250 250 ASP ASP B . n D 4 6 PRO 6 251 251 PRO PRO B . n D 4 7 ILE 7 252 252 ILE ILE B . n D 4 8 LEU 8 253 253 LEU LEU B . n D 4 9 LEU 9 254 254 LEU LEU B . n D 4 10 ARG 10 255 255 ARG ARG B . n D 4 11 PRO 11 256 256 PRO PRO B . n D 4 12 VAL 12 257 257 VAL VAL B . n D 4 13 ASP 13 258 258 ASP ASP B . n D 4 14 ASP 14 259 259 ASP ASP B . n D 4 15 LEU 15 260 260 LEU LEU B . n D 4 16 GLU 16 261 261 GLU GLU B . n D 4 17 LEU 17 262 262 LEU LEU B . n D 4 18 THR 18 263 263 THR THR B . n D 4 19 VAL 19 264 264 VAL VAL B . n D 4 20 ARG 20 265 265 ARG ARG B . n D 4 21 SER 21 266 266 SER SER B . n D 4 22 ALA 22 267 267 ALA ALA B . n D 4 23 ASN 23 268 268 ASN ASN B . n D 4 24 CYS 24 269 269 CYS CYS B . n D 4 25 LEU 25 270 270 LEU LEU B . n D 4 26 LYS 26 271 271 LYS LYS B . n D 4 27 ALA 27 272 272 ALA ALA B . n D 4 28 GLU 28 273 273 GLU GLU B . n D 4 29 ALA 29 274 274 ALA ALA B . n D 4 30 ILE 30 275 275 ILE ILE B . n D 4 31 HIS 31 276 276 HIS HIS B . n D 4 32 TYR 32 277 277 TYR TYR B . n D 4 33 ILE 33 278 278 ILE ILE B . n D 4 34 GLY 34 279 279 GLY GLY B . n D 4 35 ASP 35 280 280 ASP ASP B . n D 4 36 LEU 36 281 281 LEU LEU B . n D 4 37 VAL 37 282 282 VAL VAL B . n D 4 38 GLN 38 283 283 GLN GLN B . n D 4 39 ARG 39 284 284 ARG ARG B . n D 4 40 THR 40 285 285 THR THR B . n D 4 41 GLU 41 286 286 GLU GLU B . n D 4 42 VAL 42 287 287 VAL VAL B . n D 4 43 GLU 43 288 288 GLU GLU B . n D 4 44 LEU 44 289 289 LEU LEU B . n D 4 45 LEU 45 290 290 LEU LEU B . n D 4 46 LYS 46 291 291 LYS LYS B . n D 4 47 THR 47 292 292 THR THR B . n D 4 48 PRO 48 293 293 PRO PRO B . n D 4 49 ASN 49 294 294 ASN ASN B . n D 4 50 LEU 50 295 295 LEU LEU B . n D 4 51 GLY 51 296 296 GLY GLY B . n D 4 52 LYS 52 297 297 LYS LYS B . n D 4 53 LYS 53 298 298 LYS LYS B . n D 4 54 SER 54 299 299 SER SER B . n D 4 55 LEU 55 300 300 LEU LEU B . n D 4 56 THR 56 301 301 THR THR B . n D 4 57 GLU 57 302 302 GLU GLU B . n D 4 58 ILE 58 303 303 ILE ILE B . n D 4 59 LYS 59 304 304 LYS LYS B . n D 4 60 ASP 60 305 305 ASP ASP B . n D 4 61 VAL 61 306 306 VAL VAL B . n D 4 62 LEU 62 307 307 LEU LEU B . n D 4 63 ALA 63 308 308 ALA ALA B . n D 4 64 SER 64 309 309 SER SER B . n D 4 65 ARG 65 310 310 ARG ARG B . n D 4 66 GLY 66 311 311 GLY GLY B . n D 4 67 LEU 67 312 312 LEU LEU B . n D 4 68 SER 68 313 313 SER SER B . n D 4 69 LEU 69 314 314 LEU LEU B . n D 4 70 GLY 70 315 315 GLY GLY B . n D 4 71 MET 71 316 316 MET MET B . n D 4 72 ARG 72 317 317 ARG ARG B . n D 4 73 LEU 73 318 318 LEU LEU B . n D 4 74 GLU 74 319 319 GLU GLU B . n D 4 75 ASN 75 320 320 ASN ASN B . n D 4 76 TRP 76 321 321 TRP TRP B . n D 4 77 PRO 77 322 ? ? ? B . n D 4 78 PRO 78 323 ? ? ? B . n D 4 79 ALA 79 324 ? ? ? B . n D 4 80 SER 80 325 ? ? ? B . n D 4 81 ILE 81 326 ? ? ? B . n D 4 82 ALA 82 327 ? ? ? B . n D 4 83 ASP 83 328 ? ? ? B . n D 4 84 GLU 84 329 ? ? ? B . n E 4 1 LYS 1 246 ? ? ? E . n E 4 2 PRO 2 247 ? ? ? E . n E 4 3 GLU 3 248 ? ? ? E . n E 4 4 PHE 4 249 ? ? ? E . n E 4 5 ASP 5 250 250 ASP ASP E . n E 4 6 PRO 6 251 251 PRO PRO E . n E 4 7 ILE 7 252 252 ILE ILE E . n E 4 8 LEU 8 253 253 LEU LEU E . n E 4 9 LEU 9 254 254 LEU LEU E . n E 4 10 ARG 10 255 255 ARG ARG E . n E 4 11 PRO 11 256 256 PRO PRO E . n E 4 12 VAL 12 257 257 VAL VAL E . n E 4 13 ASP 13 258 258 ASP ASP E . n E 4 14 ASP 14 259 259 ASP ASP E . n E 4 15 LEU 15 260 260 LEU LEU E . n E 4 16 GLU 16 261 261 GLU GLU E . n E 4 17 LEU 17 262 262 LEU LEU E . n E 4 18 THR 18 263 263 THR THR E . n E 4 19 VAL 19 264 264 VAL VAL E . n E 4 20 ARG 20 265 265 ARG ARG E . n E 4 21 SER 21 266 266 SER SER E . n E 4 22 ALA 22 267 267 ALA ALA E . n E 4 23 ASN 23 268 268 ASN ASN E . n E 4 24 CYS 24 269 269 CYS CYS E . n E 4 25 LEU 25 270 270 LEU LEU E . n E 4 26 LYS 26 271 271 LYS LYS E . n E 4 27 ALA 27 272 272 ALA ALA E . n E 4 28 GLU 28 273 273 GLU GLU E . n E 4 29 ALA 29 274 274 ALA ALA E . n E 4 30 ILE 30 275 275 ILE ILE E . n E 4 31 HIS 31 276 276 HIS HIS E . n E 4 32 TYR 32 277 277 TYR TYR E . n E 4 33 ILE 33 278 278 ILE ILE E . n E 4 34 GLY 34 279 279 GLY GLY E . n E 4 35 ASP 35 280 280 ASP ASP E . n E 4 36 LEU 36 281 281 LEU LEU E . n E 4 37 VAL 37 282 282 VAL VAL E . n E 4 38 GLN 38 283 283 GLN GLN E . n E 4 39 ARG 39 284 284 ARG ARG E . n E 4 40 THR 40 285 285 THR THR E . n E 4 41 GLU 41 286 286 GLU GLU E . n E 4 42 VAL 42 287 287 VAL VAL E . n E 4 43 GLU 43 288 288 GLU GLU E . n E 4 44 LEU 44 289 289 LEU LEU E . n E 4 45 LEU 45 290 290 LEU LEU E . n E 4 46 LYS 46 291 291 LYS LYS E . n E 4 47 THR 47 292 292 THR THR E . n E 4 48 PRO 48 293 293 PRO PRO E . n E 4 49 ASN 49 294 294 ASN ASN E . n E 4 50 LEU 50 295 295 LEU LEU E . n E 4 51 GLY 51 296 296 GLY GLY E . n E 4 52 LYS 52 297 297 LYS LYS E . n E 4 53 LYS 53 298 298 LYS LYS E . n E 4 54 SER 54 299 299 SER SER E . n E 4 55 LEU 55 300 300 LEU LEU E . n E 4 56 THR 56 301 301 THR THR E . n E 4 57 GLU 57 302 302 GLU GLU E . n E 4 58 ILE 58 303 303 ILE ILE E . n E 4 59 LYS 59 304 304 LYS LYS E . n E 4 60 ASP 60 305 305 ASP ASP E . n E 4 61 VAL 61 306 306 VAL VAL E . n E 4 62 LEU 62 307 307 LEU LEU E . n E 4 63 ALA 63 308 308 ALA ALA E . n E 4 64 SER 64 309 309 SER SER E . n E 4 65 ARG 65 310 310 ARG ARG E . n E 4 66 GLY 66 311 311 GLY GLY E . n E 4 67 LEU 67 312 312 LEU LEU E . n E 4 68 SER 68 313 313 SER SER E . n E 4 69 LEU 69 314 314 LEU LEU E . n E 4 70 GLY 70 315 315 GLY GLY E . n E 4 71 MET 71 316 ? ? ? E . n E 4 72 ARG 72 317 ? ? ? E . n E 4 73 LEU 73 318 ? ? ? E . n E 4 74 GLU 74 319 ? ? ? E . n E 4 75 ASN 75 320 ? ? ? E . n E 4 76 TRP 76 321 ? ? ? E . n E 4 77 PRO 77 322 ? ? ? E . n E 4 78 PRO 78 323 ? ? ? E . n E 4 79 ALA 79 324 ? ? ? E . n E 4 80 SER 80 325 ? ? ? E . n E 4 81 ILE 81 326 ? ? ? E . n E 4 82 ALA 82 327 ? ? ? E . n E 4 83 ASP 83 328 ? ? ? E . n E 4 84 GLU 84 329 ? ? ? E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 CMP 1 679 679 CMP CMP A . G 6 HOH 1 34 20 HOH HOH K . H 6 HOH 1 34 1 HOH HOH J . H 6 HOH 2 35 5 HOH HOH J . H 6 HOH 3 36 12 HOH HOH J . H 6 HOH 4 37 14 HOH HOH J . H 6 HOH 5 38 22 HOH HOH J . H 6 HOH 6 39 30 HOH HOH J . I 6 HOH 1 680 2 HOH HOH A . I 6 HOH 2 681 3 HOH HOH A . I 6 HOH 3 682 6 HOH HOH A . I 6 HOH 4 683 7 HOH HOH A . I 6 HOH 5 684 8 HOH HOH A . I 6 HOH 6 685 9 HOH HOH A . I 6 HOH 7 686 10 HOH HOH A . I 6 HOH 8 687 13 HOH HOH A . I 6 HOH 9 688 17 HOH HOH A . I 6 HOH 10 689 18 HOH HOH A . I 6 HOH 11 690 19 HOH HOH A . I 6 HOH 12 691 21 HOH HOH A . I 6 HOH 13 692 23 HOH HOH A . I 6 HOH 14 693 24 HOH HOH A . I 6 HOH 15 694 25 HOH HOH A . I 6 HOH 16 695 27 HOH HOH A . I 6 HOH 17 696 29 HOH HOH A . I 6 HOH 18 697 31 HOH HOH A . I 6 HOH 19 698 33 HOH HOH A . J 6 HOH 1 4 4 HOH HOH B . J 6 HOH 2 11 11 HOH HOH B . J 6 HOH 3 15 15 HOH HOH B . J 6 HOH 4 26 26 HOH HOH B . K 6 HOH 1 16 16 HOH HOH E . K 6 HOH 2 34 34 HOH HOH E . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 11_555 -x+y,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2002-09-06 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement 1.0 ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 26 ? ? 82.69 -5.33 2 1 ASN A 65 ? ? -106.90 -168.58 3 1 LYS A 100 ? ? -52.42 -71.58 4 1 ASN A 109 ? ? -163.92 104.71 5 1 GLN A 153 ? ? -35.25 156.51 6 1 ASP A 155 ? ? -57.53 0.73 7 1 ILE A 167 ? ? -172.00 139.62 8 1 GLN A 193 ? ? -58.05 9.54 9 1 ASN A 194 ? ? 38.71 74.82 10 1 LEU B 253 ? ? -55.94 -5.23 11 1 VAL B 264 ? ? -49.30 -70.83 12 1 ALA B 267 ? ? -44.58 -72.71 13 1 HIS B 276 ? ? -107.82 -65.50 14 1 GLN B 283 ? ? -103.65 64.41 15 1 ARG B 310 ? ? -66.53 6.96 16 1 LEU B 318 ? ? -177.01 134.63 17 1 ASN B 320 ? ? 71.64 99.38 18 1 GLU E 261 ? ? 51.75 115.42 19 1 LEU E 262 ? ? -130.35 -96.02 20 1 ALA E 267 ? ? -54.40 -72.76 21 1 ILE E 278 ? ? -52.32 -5.84 22 1 LEU E 281 ? ? -62.06 -76.60 23 1 VAL E 282 ? ? -44.42 -17.03 24 1 GLU E 286 ? ? -47.35 -70.57 25 1 VAL E 287 ? ? -38.58 -35.46 26 1 SER E 299 ? ? -54.85 -71.36 27 1 SER E 313 ? ? -106.58 -166.62 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC K 33 ? ? 0.068 'SIDE CHAIN' 2 1 DA K 20 ? ? 0.055 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 1 ? C VAL 1 2 1 Y 1 A LEU 2 ? C LEU 2 3 1 Y 1 A GLY 3 ? C GLY 3 4 1 Y 1 A LYS 4 ? C LYS 4 5 1 Y 1 A PRO 5 ? C PRO 5 6 1 Y 1 A GLN 6 ? C GLN 6 7 1 Y 1 A THR 7 ? C THR 7 8 1 Y 1 A ASP 8 ? C ASP 8 9 1 Y 1 B LYS 246 ? D LYS 1 10 1 Y 1 B PRO 247 ? D PRO 2 11 1 Y 1 B GLU 248 ? D GLU 3 12 1 Y 1 B PHE 249 ? D PHE 4 13 1 Y 1 B PRO 322 ? D PRO 77 14 1 Y 1 B PRO 323 ? D PRO 78 15 1 Y 1 B ALA 324 ? D ALA 79 16 1 Y 1 B SER 325 ? D SER 80 17 1 Y 1 B ILE 326 ? D ILE 81 18 1 Y 1 B ALA 327 ? D ALA 82 19 1 Y 1 B ASP 328 ? D ASP 83 20 1 Y 1 B GLU 329 ? D GLU 84 21 1 Y 1 E LYS 246 ? E LYS 1 22 1 Y 1 E PRO 247 ? E PRO 2 23 1 Y 1 E GLU 248 ? E GLU 3 24 1 Y 1 E PHE 249 ? E PHE 4 25 1 Y 1 E MET 316 ? E MET 71 26 1 Y 1 E ARG 317 ? E ARG 72 27 1 Y 1 E LEU 318 ? E LEU 73 28 1 Y 1 E GLU 319 ? E GLU 74 29 1 Y 1 E ASN 320 ? E ASN 75 30 1 Y 1 E TRP 321 ? E TRP 76 31 1 Y 1 E PRO 322 ? E PRO 77 32 1 Y 1 E PRO 323 ? E PRO 78 33 1 Y 1 E ALA 324 ? E ALA 79 34 1 Y 1 E SER 325 ? E SER 80 35 1 Y 1 E ILE 326 ? E ILE 81 36 1 Y 1 E ALA 327 ? E ALA 82 37 1 Y 1 E ASP 328 ? E ASP 83 38 1 Y 1 E GLU 329 ? E GLU 84 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CMP P P N R 74 CMP O1P O N N 75 CMP O2P O N N 76 CMP "O5'" O N N 77 CMP "C5'" C N N 78 CMP "C4'" C N R 79 CMP "O4'" O N N 80 CMP "C3'" C N S 81 CMP "O3'" O N N 82 CMP "C2'" C N R 83 CMP "O2'" O N N 84 CMP "C1'" C N R 85 CMP N9 N Y N 86 CMP C8 C Y N 87 CMP N7 N Y N 88 CMP C5 C Y N 89 CMP C6 C Y N 90 CMP N6 N N N 91 CMP N1 N Y N 92 CMP C2 C Y N 93 CMP N3 N Y N 94 CMP C4 C Y N 95 CMP HOP2 H N N 96 CMP "H5'1" H N N 97 CMP "H5'2" H N N 98 CMP "H4'" H N N 99 CMP "H3'" H N N 100 CMP "H2'" H N N 101 CMP "HO2'" H N N 102 CMP "H1'" H N N 103 CMP H8 H N N 104 CMP HN61 H N N 105 CMP HN62 H N N 106 CMP H2 H N N 107 CYS N N N N 108 CYS CA C N R 109 CYS C C N N 110 CYS O O N N 111 CYS CB C N N 112 CYS SG S N N 113 CYS OXT O N N 114 CYS H H N N 115 CYS H2 H N N 116 CYS HA H N N 117 CYS HB2 H N N 118 CYS HB3 H N N 119 CYS HG H N N 120 CYS HXT H N N 121 DA OP3 O N N 122 DA P P N N 123 DA OP1 O N N 124 DA OP2 O N N 125 DA "O5'" O N N 126 DA "C5'" C N N 127 DA "C4'" C N R 128 DA "O4'" O N N 129 DA "C3'" C N S 130 DA "O3'" O N N 131 DA "C2'" C N N 132 DA "C1'" C N R 133 DA N9 N Y N 134 DA C8 C Y N 135 DA N7 N Y N 136 DA C5 C Y N 137 DA C6 C Y N 138 DA N6 N N N 139 DA N1 N Y N 140 DA C2 C Y N 141 DA N3 N Y N 142 DA C4 C Y N 143 DA HOP3 H N N 144 DA HOP2 H N N 145 DA "H5'" H N N 146 DA "H5''" H N N 147 DA "H4'" H N N 148 DA "H3'" H N N 149 DA "HO3'" H N N 150 DA "H2'" H N N 151 DA "H2''" H N N 152 DA "H1'" H N N 153 DA H8 H N N 154 DA H61 H N N 155 DA H62 H N N 156 DA H2 H N N 157 DC OP3 O N N 158 DC P P N N 159 DC OP1 O N N 160 DC OP2 O N N 161 DC "O5'" O N N 162 DC "C5'" C N N 163 DC "C4'" C N R 164 DC "O4'" O N N 165 DC "C3'" C N S 166 DC "O3'" O N N 167 DC "C2'" C N N 168 DC "C1'" C N R 169 DC N1 N N N 170 DC C2 C N N 171 DC O2 O N N 172 DC N3 N N N 173 DC C4 C N N 174 DC N4 N N N 175 DC C5 C N N 176 DC C6 C N N 177 DC HOP3 H N N 178 DC HOP2 H N N 179 DC "H5'" H N N 180 DC "H5''" H N N 181 DC "H4'" H N N 182 DC "H3'" H N N 183 DC "HO3'" H N N 184 DC "H2'" H N N 185 DC "H2''" H N N 186 DC "H1'" H N N 187 DC H41 H N N 188 DC H42 H N N 189 DC H5 H N N 190 DC H6 H N N 191 DG OP3 O N N 192 DG P P N N 193 DG OP1 O N N 194 DG OP2 O N N 195 DG "O5'" O N N 196 DG "C5'" C N N 197 DG "C4'" C N R 198 DG "O4'" O N N 199 DG "C3'" C N S 200 DG "O3'" O N N 201 DG "C2'" C N N 202 DG "C1'" C N R 203 DG N9 N Y N 204 DG C8 C Y N 205 DG N7 N Y N 206 DG C5 C Y N 207 DG C6 C N N 208 DG O6 O N N 209 DG N1 N N N 210 DG C2 C N N 211 DG N2 N N N 212 DG N3 N N N 213 DG C4 C Y N 214 DG HOP3 H N N 215 DG HOP2 H N N 216 DG "H5'" H N N 217 DG "H5''" H N N 218 DG "H4'" H N N 219 DG "H3'" H N N 220 DG "HO3'" H N N 221 DG "H2'" H N N 222 DG "H2''" H N N 223 DG "H1'" H N N 224 DG H8 H N N 225 DG H1 H N N 226 DG H21 H N N 227 DG H22 H N N 228 DT OP3 O N N 229 DT P P N N 230 DT OP1 O N N 231 DT OP2 O N N 232 DT "O5'" O N N 233 DT "C5'" C N N 234 DT "C4'" C N R 235 DT "O4'" O N N 236 DT "C3'" C N S 237 DT "O3'" O N N 238 DT "C2'" C N N 239 DT "C1'" C N R 240 DT N1 N N N 241 DT C2 C N N 242 DT O2 O N N 243 DT N3 N N N 244 DT C4 C N N 245 DT O4 O N N 246 DT C5 C N N 247 DT C7 C N N 248 DT C6 C N N 249 DT HOP3 H N N 250 DT HOP2 H N N 251 DT "H5'" H N N 252 DT "H5''" H N N 253 DT "H4'" H N N 254 DT "H3'" H N N 255 DT "HO3'" H N N 256 DT "H2'" H N N 257 DT "H2''" H N N 258 DT "H1'" H N N 259 DT H3 H N N 260 DT H71 H N N 261 DT H72 H N N 262 DT H73 H N N 263 DT H6 H N N 264 GLN N N N N 265 GLN CA C N S 266 GLN C C N N 267 GLN O O N N 268 GLN CB C N N 269 GLN CG C N N 270 GLN CD C N N 271 GLN OE1 O N N 272 GLN NE2 N N N 273 GLN OXT O N N 274 GLN H H N N 275 GLN H2 H N N 276 GLN HA H N N 277 GLN HB2 H N N 278 GLN HB3 H N N 279 GLN HG2 H N N 280 GLN HG3 H N N 281 GLN HE21 H N N 282 GLN HE22 H N N 283 GLN HXT H N N 284 GLU N N N N 285 GLU CA C N S 286 GLU C C N N 287 GLU O O N N 288 GLU CB C N N 289 GLU CG C N N 290 GLU CD C N N 291 GLU OE1 O N N 292 GLU OE2 O N N 293 GLU OXT O N N 294 GLU H H N N 295 GLU H2 H N N 296 GLU HA H N N 297 GLU HB2 H N N 298 GLU HB3 H N N 299 GLU HG2 H N N 300 GLU HG3 H N N 301 GLU HE2 H N N 302 GLU HXT H N N 303 GLY N N N N 304 GLY CA C N N 305 GLY C C N N 306 GLY O O N N 307 GLY OXT O N N 308 GLY H H N N 309 GLY H2 H N N 310 GLY HA2 H N N 311 GLY HA3 H N N 312 GLY HXT H N N 313 HIS N N N N 314 HIS CA C N S 315 HIS C C N N 316 HIS O O N N 317 HIS CB C N N 318 HIS CG C Y N 319 HIS ND1 N Y N 320 HIS CD2 C Y N 321 HIS CE1 C Y N 322 HIS NE2 N Y N 323 HIS OXT O N N 324 HIS H H N N 325 HIS H2 H N N 326 HIS HA H N N 327 HIS HB2 H N N 328 HIS HB3 H N N 329 HIS HD1 H N N 330 HIS HD2 H N N 331 HIS HE1 H N N 332 HIS HE2 H N N 333 HIS HXT H N N 334 HOH O O N N 335 HOH H1 H N N 336 HOH H2 H N N 337 ILE N N N N 338 ILE CA C N S 339 ILE C C N N 340 ILE O O N N 341 ILE CB C N S 342 ILE CG1 C N N 343 ILE CG2 C N N 344 ILE CD1 C N N 345 ILE OXT O N N 346 ILE H H N N 347 ILE H2 H N N 348 ILE HA H N N 349 ILE HB H N N 350 ILE HG12 H N N 351 ILE HG13 H N N 352 ILE HG21 H N N 353 ILE HG22 H N N 354 ILE HG23 H N N 355 ILE HD11 H N N 356 ILE HD12 H N N 357 ILE HD13 H N N 358 ILE HXT H N N 359 LEU N N N N 360 LEU CA C N S 361 LEU C C N N 362 LEU O O N N 363 LEU CB C N N 364 LEU CG C N N 365 LEU CD1 C N N 366 LEU CD2 C N N 367 LEU OXT O N N 368 LEU H H N N 369 LEU H2 H N N 370 LEU HA H N N 371 LEU HB2 H N N 372 LEU HB3 H N N 373 LEU HG H N N 374 LEU HD11 H N N 375 LEU HD12 H N N 376 LEU HD13 H N N 377 LEU HD21 H N N 378 LEU HD22 H N N 379 LEU HD23 H N N 380 LEU HXT H N N 381 LYS N N N N 382 LYS CA C N S 383 LYS C C N N 384 LYS O O N N 385 LYS CB C N N 386 LYS CG C N N 387 LYS CD C N N 388 LYS CE C N N 389 LYS NZ N N N 390 LYS OXT O N N 391 LYS H H N N 392 LYS H2 H N N 393 LYS HA H N N 394 LYS HB2 H N N 395 LYS HB3 H N N 396 LYS HG2 H N N 397 LYS HG3 H N N 398 LYS HD2 H N N 399 LYS HD3 H N N 400 LYS HE2 H N N 401 LYS HE3 H N N 402 LYS HZ1 H N N 403 LYS HZ2 H N N 404 LYS HZ3 H N N 405 LYS HXT H N N 406 MET N N N N 407 MET CA C N S 408 MET C C N N 409 MET O O N N 410 MET CB C N N 411 MET CG C N N 412 MET SD S N N 413 MET CE C N N 414 MET OXT O N N 415 MET H H N N 416 MET H2 H N N 417 MET HA H N N 418 MET HB2 H N N 419 MET HB3 H N N 420 MET HG2 H N N 421 MET HG3 H N N 422 MET HE1 H N N 423 MET HE2 H N N 424 MET HE3 H N N 425 MET HXT H N N 426 PHE N N N N 427 PHE CA C N S 428 PHE C C N N 429 PHE O O N N 430 PHE CB C N N 431 PHE CG C Y N 432 PHE CD1 C Y N 433 PHE CD2 C Y N 434 PHE CE1 C Y N 435 PHE CE2 C Y N 436 PHE CZ C Y N 437 PHE OXT O N N 438 PHE H H N N 439 PHE H2 H N N 440 PHE HA H N N 441 PHE HB2 H N N 442 PHE HB3 H N N 443 PHE HD1 H N N 444 PHE HD2 H N N 445 PHE HE1 H N N 446 PHE HE2 H N N 447 PHE HZ H N N 448 PHE HXT H N N 449 PRO N N N N 450 PRO CA C N S 451 PRO C C N N 452 PRO O O N N 453 PRO CB C N N 454 PRO CG C N N 455 PRO CD C N N 456 PRO OXT O N N 457 PRO H H N N 458 PRO HA H N N 459 PRO HB2 H N N 460 PRO HB3 H N N 461 PRO HG2 H N N 462 PRO HG3 H N N 463 PRO HD2 H N N 464 PRO HD3 H N N 465 PRO HXT H N N 466 SER N N N N 467 SER CA C N S 468 SER C C N N 469 SER O O N N 470 SER CB C N N 471 SER OG O N N 472 SER OXT O N N 473 SER H H N N 474 SER H2 H N N 475 SER HA H N N 476 SER HB2 H N N 477 SER HB3 H N N 478 SER HG H N N 479 SER HXT H N N 480 THR N N N N 481 THR CA C N S 482 THR C C N N 483 THR O O N N 484 THR CB C N R 485 THR OG1 O N N 486 THR CG2 C N N 487 THR OXT O N N 488 THR H H N N 489 THR H2 H N N 490 THR HA H N N 491 THR HB H N N 492 THR HG1 H N N 493 THR HG21 H N N 494 THR HG22 H N N 495 THR HG23 H N N 496 THR HXT H N N 497 TRP N N N N 498 TRP CA C N S 499 TRP C C N N 500 TRP O O N N 501 TRP CB C N N 502 TRP CG C Y N 503 TRP CD1 C Y N 504 TRP CD2 C Y N 505 TRP NE1 N Y N 506 TRP CE2 C Y N 507 TRP CE3 C Y N 508 TRP CZ2 C Y N 509 TRP CZ3 C Y N 510 TRP CH2 C Y N 511 TRP OXT O N N 512 TRP H H N N 513 TRP H2 H N N 514 TRP HA H N N 515 TRP HB2 H N N 516 TRP HB3 H N N 517 TRP HD1 H N N 518 TRP HE1 H N N 519 TRP HE3 H N N 520 TRP HZ2 H N N 521 TRP HZ3 H N N 522 TRP HH2 H N N 523 TRP HXT H N N 524 TYR N N N N 525 TYR CA C N S 526 TYR C C N N 527 TYR O O N N 528 TYR CB C N N 529 TYR CG C Y N 530 TYR CD1 C Y N 531 TYR CD2 C Y N 532 TYR CE1 C Y N 533 TYR CE2 C Y N 534 TYR CZ C Y N 535 TYR OH O N N 536 TYR OXT O N N 537 TYR H H N N 538 TYR H2 H N N 539 TYR HA H N N 540 TYR HB2 H N N 541 TYR HB3 H N N 542 TYR HD1 H N N 543 TYR HD2 H N N 544 TYR HE1 H N N 545 TYR HE2 H N N 546 TYR HH H N N 547 TYR HXT H N N 548 VAL N N N N 549 VAL CA C N S 550 VAL C C N N 551 VAL O O N N 552 VAL CB C N N 553 VAL CG1 C N N 554 VAL CG2 C N N 555 VAL OXT O N N 556 VAL H H N N 557 VAL H2 H N N 558 VAL HA H N N 559 VAL HB H N N 560 VAL HG11 H N N 561 VAL HG12 H N N 562 VAL HG13 H N N 563 VAL HG21 H N N 564 VAL HG22 H N N 565 VAL HG23 H N N 566 VAL HXT H N N 567 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CMP P O1P doub N N 70 CMP P O2P sing N N 71 CMP P "O5'" sing N N 72 CMP P "O3'" sing N N 73 CMP O2P HOP2 sing N N 74 CMP "O5'" "C5'" sing N N 75 CMP "C5'" "C4'" sing N N 76 CMP "C5'" "H5'1" sing N N 77 CMP "C5'" "H5'2" sing N N 78 CMP "C4'" "O4'" sing N N 79 CMP "C4'" "C3'" sing N N 80 CMP "C4'" "H4'" sing N N 81 CMP "O4'" "C1'" sing N N 82 CMP "C3'" "O3'" sing N N 83 CMP "C3'" "C2'" sing N N 84 CMP "C3'" "H3'" sing N N 85 CMP "C2'" "O2'" sing N N 86 CMP "C2'" "C1'" sing N N 87 CMP "C2'" "H2'" sing N N 88 CMP "O2'" "HO2'" sing N N 89 CMP "C1'" N9 sing N N 90 CMP "C1'" "H1'" sing N N 91 CMP N9 C8 sing Y N 92 CMP N9 C4 sing Y N 93 CMP C8 N7 doub Y N 94 CMP C8 H8 sing N N 95 CMP N7 C5 sing Y N 96 CMP C5 C6 sing Y N 97 CMP C5 C4 doub Y N 98 CMP C6 N6 sing N N 99 CMP C6 N1 doub Y N 100 CMP N6 HN61 sing N N 101 CMP N6 HN62 sing N N 102 CMP N1 C2 sing Y N 103 CMP C2 N3 doub Y N 104 CMP C2 H2 sing N N 105 CMP N3 C4 sing Y N 106 CYS N CA sing N N 107 CYS N H sing N N 108 CYS N H2 sing N N 109 CYS CA C sing N N 110 CYS CA CB sing N N 111 CYS CA HA sing N N 112 CYS C O doub N N 113 CYS C OXT sing N N 114 CYS CB SG sing N N 115 CYS CB HB2 sing N N 116 CYS CB HB3 sing N N 117 CYS SG HG sing N N 118 CYS OXT HXT sing N N 119 DA OP3 P sing N N 120 DA OP3 HOP3 sing N N 121 DA P OP1 doub N N 122 DA P OP2 sing N N 123 DA P "O5'" sing N N 124 DA OP2 HOP2 sing N N 125 DA "O5'" "C5'" sing N N 126 DA "C5'" "C4'" sing N N 127 DA "C5'" "H5'" sing N N 128 DA "C5'" "H5''" sing N N 129 DA "C4'" "O4'" sing N N 130 DA "C4'" "C3'" sing N N 131 DA "C4'" "H4'" sing N N 132 DA "O4'" "C1'" sing N N 133 DA "C3'" "O3'" sing N N 134 DA "C3'" "C2'" sing N N 135 DA "C3'" "H3'" sing N N 136 DA "O3'" "HO3'" sing N N 137 DA "C2'" "C1'" sing N N 138 DA "C2'" "H2'" sing N N 139 DA "C2'" "H2''" sing N N 140 DA "C1'" N9 sing N N 141 DA "C1'" "H1'" sing N N 142 DA N9 C8 sing Y N 143 DA N9 C4 sing Y N 144 DA C8 N7 doub Y N 145 DA C8 H8 sing N N 146 DA N7 C5 sing Y N 147 DA C5 C6 sing Y N 148 DA C5 C4 doub Y N 149 DA C6 N6 sing N N 150 DA C6 N1 doub Y N 151 DA N6 H61 sing N N 152 DA N6 H62 sing N N 153 DA N1 C2 sing Y N 154 DA C2 N3 doub Y N 155 DA C2 H2 sing N N 156 DA N3 C4 sing Y N 157 DC OP3 P sing N N 158 DC OP3 HOP3 sing N N 159 DC P OP1 doub N N 160 DC P OP2 sing N N 161 DC P "O5'" sing N N 162 DC OP2 HOP2 sing N N 163 DC "O5'" "C5'" sing N N 164 DC "C5'" "C4'" sing N N 165 DC "C5'" "H5'" sing N N 166 DC "C5'" "H5''" sing N N 167 DC "C4'" "O4'" sing N N 168 DC "C4'" "C3'" sing N N 169 DC "C4'" "H4'" sing N N 170 DC "O4'" "C1'" sing N N 171 DC "C3'" "O3'" sing N N 172 DC "C3'" "C2'" sing N N 173 DC "C3'" "H3'" sing N N 174 DC "O3'" "HO3'" sing N N 175 DC "C2'" "C1'" sing N N 176 DC "C2'" "H2'" sing N N 177 DC "C2'" "H2''" sing N N 178 DC "C1'" N1 sing N N 179 DC "C1'" "H1'" sing N N 180 DC N1 C2 sing N N 181 DC N1 C6 sing N N 182 DC C2 O2 doub N N 183 DC C2 N3 sing N N 184 DC N3 C4 doub N N 185 DC C4 N4 sing N N 186 DC C4 C5 sing N N 187 DC N4 H41 sing N N 188 DC N4 H42 sing N N 189 DC C5 C6 doub N N 190 DC C5 H5 sing N N 191 DC C6 H6 sing N N 192 DG OP3 P sing N N 193 DG OP3 HOP3 sing N N 194 DG P OP1 doub N N 195 DG P OP2 sing N N 196 DG P "O5'" sing N N 197 DG OP2 HOP2 sing N N 198 DG "O5'" "C5'" sing N N 199 DG "C5'" "C4'" sing N N 200 DG "C5'" "H5'" sing N N 201 DG "C5'" "H5''" sing N N 202 DG "C4'" "O4'" sing N N 203 DG "C4'" "C3'" sing N N 204 DG "C4'" "H4'" sing N N 205 DG "O4'" "C1'" sing N N 206 DG "C3'" "O3'" sing N N 207 DG "C3'" "C2'" sing N N 208 DG "C3'" "H3'" sing N N 209 DG "O3'" "HO3'" sing N N 210 DG "C2'" "C1'" sing N N 211 DG "C2'" "H2'" sing N N 212 DG "C2'" "H2''" sing N N 213 DG "C1'" N9 sing N N 214 DG "C1'" "H1'" sing N N 215 DG N9 C8 sing Y N 216 DG N9 C4 sing Y N 217 DG C8 N7 doub Y N 218 DG C8 H8 sing N N 219 DG N7 C5 sing Y N 220 DG C5 C6 sing N N 221 DG C5 C4 doub Y N 222 DG C6 O6 doub N N 223 DG C6 N1 sing N N 224 DG N1 C2 sing N N 225 DG N1 H1 sing N N 226 DG C2 N2 sing N N 227 DG C2 N3 doub N N 228 DG N2 H21 sing N N 229 DG N2 H22 sing N N 230 DG N3 C4 sing N N 231 DT OP3 P sing N N 232 DT OP3 HOP3 sing N N 233 DT P OP1 doub N N 234 DT P OP2 sing N N 235 DT P "O5'" sing N N 236 DT OP2 HOP2 sing N N 237 DT "O5'" "C5'" sing N N 238 DT "C5'" "C4'" sing N N 239 DT "C5'" "H5'" sing N N 240 DT "C5'" "H5''" sing N N 241 DT "C4'" "O4'" sing N N 242 DT "C4'" "C3'" sing N N 243 DT "C4'" "H4'" sing N N 244 DT "O4'" "C1'" sing N N 245 DT "C3'" "O3'" sing N N 246 DT "C3'" "C2'" sing N N 247 DT "C3'" "H3'" sing N N 248 DT "O3'" "HO3'" sing N N 249 DT "C2'" "C1'" sing N N 250 DT "C2'" "H2'" sing N N 251 DT "C2'" "H2''" sing N N 252 DT "C1'" N1 sing N N 253 DT "C1'" "H1'" sing N N 254 DT N1 C2 sing N N 255 DT N1 C6 sing N N 256 DT C2 O2 doub N N 257 DT C2 N3 sing N N 258 DT N3 C4 sing N N 259 DT N3 H3 sing N N 260 DT C4 O4 doub N N 261 DT C4 C5 sing N N 262 DT C5 C7 sing N N 263 DT C5 C6 doub N N 264 DT C7 H71 sing N N 265 DT C7 H72 sing N N 266 DT C7 H73 sing N N 267 DT C6 H6 sing N N 268 GLN N CA sing N N 269 GLN N H sing N N 270 GLN N H2 sing N N 271 GLN CA C sing N N 272 GLN CA CB sing N N 273 GLN CA HA sing N N 274 GLN C O doub N N 275 GLN C OXT sing N N 276 GLN CB CG sing N N 277 GLN CB HB2 sing N N 278 GLN CB HB3 sing N N 279 GLN CG CD sing N N 280 GLN CG HG2 sing N N 281 GLN CG HG3 sing N N 282 GLN CD OE1 doub N N 283 GLN CD NE2 sing N N 284 GLN NE2 HE21 sing N N 285 GLN NE2 HE22 sing N N 286 GLN OXT HXT sing N N 287 GLU N CA sing N N 288 GLU N H sing N N 289 GLU N H2 sing N N 290 GLU CA C sing N N 291 GLU CA CB sing N N 292 GLU CA HA sing N N 293 GLU C O doub N N 294 GLU C OXT sing N N 295 GLU CB CG sing N N 296 GLU CB HB2 sing N N 297 GLU CB HB3 sing N N 298 GLU CG CD sing N N 299 GLU CG HG2 sing N N 300 GLU CG HG3 sing N N 301 GLU CD OE1 doub N N 302 GLU CD OE2 sing N N 303 GLU OE2 HE2 sing N N 304 GLU OXT HXT sing N N 305 GLY N CA sing N N 306 GLY N H sing N N 307 GLY N H2 sing N N 308 GLY CA C sing N N 309 GLY CA HA2 sing N N 310 GLY CA HA3 sing N N 311 GLY C O doub N N 312 GLY C OXT sing N N 313 GLY OXT HXT sing N N 314 HIS N CA sing N N 315 HIS N H sing N N 316 HIS N H2 sing N N 317 HIS CA C sing N N 318 HIS CA CB sing N N 319 HIS CA HA sing N N 320 HIS C O doub N N 321 HIS C OXT sing N N 322 HIS CB CG sing N N 323 HIS CB HB2 sing N N 324 HIS CB HB3 sing N N 325 HIS CG ND1 sing Y N 326 HIS CG CD2 doub Y N 327 HIS ND1 CE1 doub Y N 328 HIS ND1 HD1 sing N N 329 HIS CD2 NE2 sing Y N 330 HIS CD2 HD2 sing N N 331 HIS CE1 NE2 sing Y N 332 HIS CE1 HE1 sing N N 333 HIS NE2 HE2 sing N N 334 HIS OXT HXT sing N N 335 HOH O H1 sing N N 336 HOH O H2 sing N N 337 ILE N CA sing N N 338 ILE N H sing N N 339 ILE N H2 sing N N 340 ILE CA C sing N N 341 ILE CA CB sing N N 342 ILE CA HA sing N N 343 ILE C O doub N N 344 ILE C OXT sing N N 345 ILE CB CG1 sing N N 346 ILE CB CG2 sing N N 347 ILE CB HB sing N N 348 ILE CG1 CD1 sing N N 349 ILE CG1 HG12 sing N N 350 ILE CG1 HG13 sing N N 351 ILE CG2 HG21 sing N N 352 ILE CG2 HG22 sing N N 353 ILE CG2 HG23 sing N N 354 ILE CD1 HD11 sing N N 355 ILE CD1 HD12 sing N N 356 ILE CD1 HD13 sing N N 357 ILE OXT HXT sing N N 358 LEU N CA sing N N 359 LEU N H sing N N 360 LEU N H2 sing N N 361 LEU CA C sing N N 362 LEU CA CB sing N N 363 LEU CA HA sing N N 364 LEU C O doub N N 365 LEU C OXT sing N N 366 LEU CB CG sing N N 367 LEU CB HB2 sing N N 368 LEU CB HB3 sing N N 369 LEU CG CD1 sing N N 370 LEU CG CD2 sing N N 371 LEU CG HG sing N N 372 LEU CD1 HD11 sing N N 373 LEU CD1 HD12 sing N N 374 LEU CD1 HD13 sing N N 375 LEU CD2 HD21 sing N N 376 LEU CD2 HD22 sing N N 377 LEU CD2 HD23 sing N N 378 LEU OXT HXT sing N N 379 LYS N CA sing N N 380 LYS N H sing N N 381 LYS N H2 sing N N 382 LYS CA C sing N N 383 LYS CA CB sing N N 384 LYS CA HA sing N N 385 LYS C O doub N N 386 LYS C OXT sing N N 387 LYS CB CG sing N N 388 LYS CB HB2 sing N N 389 LYS CB HB3 sing N N 390 LYS CG CD sing N N 391 LYS CG HG2 sing N N 392 LYS CG HG3 sing N N 393 LYS CD CE sing N N 394 LYS CD HD2 sing N N 395 LYS CD HD3 sing N N 396 LYS CE NZ sing N N 397 LYS CE HE2 sing N N 398 LYS CE HE3 sing N N 399 LYS NZ HZ1 sing N N 400 LYS NZ HZ2 sing N N 401 LYS NZ HZ3 sing N N 402 LYS OXT HXT sing N N 403 MET N CA sing N N 404 MET N H sing N N 405 MET N H2 sing N N 406 MET CA C sing N N 407 MET CA CB sing N N 408 MET CA HA sing N N 409 MET C O doub N N 410 MET C OXT sing N N 411 MET CB CG sing N N 412 MET CB HB2 sing N N 413 MET CB HB3 sing N N 414 MET CG SD sing N N 415 MET CG HG2 sing N N 416 MET CG HG3 sing N N 417 MET SD CE sing N N 418 MET CE HE1 sing N N 419 MET CE HE2 sing N N 420 MET CE HE3 sing N N 421 MET OXT HXT sing N N 422 PHE N CA sing N N 423 PHE N H sing N N 424 PHE N H2 sing N N 425 PHE CA C sing N N 426 PHE CA CB sing N N 427 PHE CA HA sing N N 428 PHE C O doub N N 429 PHE C OXT sing N N 430 PHE CB CG sing N N 431 PHE CB HB2 sing N N 432 PHE CB HB3 sing N N 433 PHE CG CD1 doub Y N 434 PHE CG CD2 sing Y N 435 PHE CD1 CE1 sing Y N 436 PHE CD1 HD1 sing N N 437 PHE CD2 CE2 doub Y N 438 PHE CD2 HD2 sing N N 439 PHE CE1 CZ doub Y N 440 PHE CE1 HE1 sing N N 441 PHE CE2 CZ sing Y N 442 PHE CE2 HE2 sing N N 443 PHE CZ HZ sing N N 444 PHE OXT HXT sing N N 445 PRO N CA sing N N 446 PRO N CD sing N N 447 PRO N H sing N N 448 PRO CA C sing N N 449 PRO CA CB sing N N 450 PRO CA HA sing N N 451 PRO C O doub N N 452 PRO C OXT sing N N 453 PRO CB CG sing N N 454 PRO CB HB2 sing N N 455 PRO CB HB3 sing N N 456 PRO CG CD sing N N 457 PRO CG HG2 sing N N 458 PRO CG HG3 sing N N 459 PRO CD HD2 sing N N 460 PRO CD HD3 sing N N 461 PRO OXT HXT sing N N 462 SER N CA sing N N 463 SER N H sing N N 464 SER N H2 sing N N 465 SER CA C sing N N 466 SER CA CB sing N N 467 SER CA HA sing N N 468 SER C O doub N N 469 SER C OXT sing N N 470 SER CB OG sing N N 471 SER CB HB2 sing N N 472 SER CB HB3 sing N N 473 SER OG HG sing N N 474 SER OXT HXT sing N N 475 THR N CA sing N N 476 THR N H sing N N 477 THR N H2 sing N N 478 THR CA C sing N N 479 THR CA CB sing N N 480 THR CA HA sing N N 481 THR C O doub N N 482 THR C OXT sing N N 483 THR CB OG1 sing N N 484 THR CB CG2 sing N N 485 THR CB HB sing N N 486 THR OG1 HG1 sing N N 487 THR CG2 HG21 sing N N 488 THR CG2 HG22 sing N N 489 THR CG2 HG23 sing N N 490 THR OXT HXT sing N N 491 TRP N CA sing N N 492 TRP N H sing N N 493 TRP N H2 sing N N 494 TRP CA C sing N N 495 TRP CA CB sing N N 496 TRP CA HA sing N N 497 TRP C O doub N N 498 TRP C OXT sing N N 499 TRP CB CG sing N N 500 TRP CB HB2 sing N N 501 TRP CB HB3 sing N N 502 TRP CG CD1 doub Y N 503 TRP CG CD2 sing Y N 504 TRP CD1 NE1 sing Y N 505 TRP CD1 HD1 sing N N 506 TRP CD2 CE2 doub Y N 507 TRP CD2 CE3 sing Y N 508 TRP NE1 CE2 sing Y N 509 TRP NE1 HE1 sing N N 510 TRP CE2 CZ2 sing Y N 511 TRP CE3 CZ3 doub Y N 512 TRP CE3 HE3 sing N N 513 TRP CZ2 CH2 doub Y N 514 TRP CZ2 HZ2 sing N N 515 TRP CZ3 CH2 sing Y N 516 TRP CZ3 HZ3 sing N N 517 TRP CH2 HH2 sing N N 518 TRP OXT HXT sing N N 519 TYR N CA sing N N 520 TYR N H sing N N 521 TYR N H2 sing N N 522 TYR CA C sing N N 523 TYR CA CB sing N N 524 TYR CA HA sing N N 525 TYR C O doub N N 526 TYR C OXT sing N N 527 TYR CB CG sing N N 528 TYR CB HB2 sing N N 529 TYR CB HB3 sing N N 530 TYR CG CD1 doub Y N 531 TYR CG CD2 sing Y N 532 TYR CD1 CE1 sing Y N 533 TYR CD1 HD1 sing N N 534 TYR CD2 CE2 doub Y N 535 TYR CD2 HD2 sing N N 536 TYR CE1 CZ doub Y N 537 TYR CE1 HE1 sing N N 538 TYR CE2 CZ sing Y N 539 TYR CE2 HE2 sing N N 540 TYR CZ OH sing N N 541 TYR OH HH sing N N 542 TYR OXT HXT sing N N 543 VAL N CA sing N N 544 VAL N H sing N N 545 VAL N H2 sing N N 546 VAL CA C sing N N 547 VAL CA CB sing N N 548 VAL CA HA sing N N 549 VAL C O doub N N 550 VAL C OXT sing N N 551 VAL CB CG1 sing N N 552 VAL CB CG2 sing N N 553 VAL CB HB sing N N 554 VAL CG1 HG11 sing N N 555 VAL CG1 HG12 sing N N 556 VAL CG1 HG13 sing N N 557 VAL CG2 HG21 sing N N 558 VAL CG2 HG22 sing N N 559 VAL CG2 HG23 sing N N 560 VAL OXT HXT sing N N 561 # _ndb_struct_conf_na.entry_id 1LB2 _ndb_struct_conf_na.feature 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 24 1_555 -0.242 -0.084 -0.343 -0.133 -9.798 -0.973 1 K_DC33:DG33_J K 33 ? J 33 ? 19 1 1 A DT 2 1_555 B DA 23 1_555 0.026 -0.176 -0.343 -4.398 -3.742 -0.868 2 K_DT32:DA32_J K 32 ? J 32 ? 20 1 1 A DT 3 1_555 B DA 22 1_555 0.119 -0.011 -0.201 -2.484 -12.175 4.097 3 K_DT31:DA31_J K 31 ? J 31 ? 20 1 1 A DT 4 1_555 B DA 21 1_555 -0.361 -0.253 -0.466 -4.482 -17.649 -1.966 4 K_DT30:DA30_J K 30 ? J 30 ? 20 1 1 A DT 5 1_555 B DA 20 1_555 0.287 -0.200 -0.185 -5.065 -18.059 -5.318 5 K_DT29:DA29_J K 29 ? J 29 ? 20 1 1 A DT 6 1_555 B DA 19 1_555 -0.175 -0.401 -0.464 -12.275 -7.208 -3.131 6 K_DT28:DA28_J K 28 ? J 28 ? 20 1 1 A DT 7 1_555 B DA 18 1_555 -0.052 -0.145 -0.450 -10.806 -12.239 -4.284 7 K_DT27:DA27_J K 27 ? J 27 ? 20 1 1 A DC 8 1_555 B DG 17 1_555 -0.225 -0.099 -0.060 -12.484 4.887 1.313 8 K_DC26:DG26_J K 26 ? J 26 ? 19 1 1 A DC 9 1_555 B DG 16 1_555 -0.378 -0.198 0.079 -9.092 5.006 -2.162 9 K_DC25:DG25_J K 25 ? J 25 ? 19 1 1 A DT 10 1_555 B DA 15 1_555 0.086 -0.206 0.062 -1.653 7.192 4.410 10 K_DT24:DA24_J K 24 ? J 24 ? 20 1 1 A DA 11 1_555 B DT 14 1_555 0.038 -0.061 0.414 11.282 -13.420 -3.814 11 K_DA23:DT23_J K 23 ? J 23 ? 20 1 1 A DA 12 1_555 B DT 13 1_555 0.411 -0.130 0.215 9.983 -5.424 -3.136 12 K_DA22:DT22_J K 22 ? J 22 ? 20 1 1 A DA 13 1_555 B DT 12 1_555 0.095 -0.062 0.288 0.204 -8.125 -2.145 13 K_DA21:DT21_J K 21 ? J 21 ? 20 1 1 A DA 14 1_555 B DT 11 1_555 0.255 -0.110 0.604 9.005 -9.230 -6.084 14 K_DA20:DT20_J K 20 ? J 20 ? 20 1 1 A DT 15 1_555 B DA 10 1_555 0.511 0.007 0.236 0.678 -15.109 2.726 15 K_DT19:DA19_J K 19 ? J 19 ? 20 1 1 A DG 16 1_555 B DC 9 1_555 -0.561 -0.461 0.270 7.255 11.186 -0.339 16 K_DG18:DC18_J K 18 ? J 18 ? 19 1 1 A DT 17 1_555 B DA 8 1_555 0.177 -0.391 -0.224 18.067 2.370 -4.793 17 K_DT17:DA17_J K 17 ? J 17 ? 20 1 1 A DG 18 1_555 B DC 7 1_555 0.571 -0.280 -0.699 -19.310 5.409 -16.196 18 K_DG16:DC16_J K 16 ? J 16 ? 19 1 1 A DA 19 1_555 B DT 6 1_555 -0.730 -0.496 -0.856 -10.069 -21.269 -4.786 19 K_DA15:DT15_J K 15 ? J 15 ? 20 1 1 A DT 20 1_555 B DA 5 1_555 -0.615 0.318 -1.095 2.858 -17.598 3.069 20 K_DT14:DA14_J K 14 ? J 14 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 24 1_555 A DT 2 1_555 B DA 23 1_555 -0.071 -0.375 3.498 2.403 9.853 35.829 -1.972 0.449 3.274 15.634 -3.813 37.191 1 KK_DC33DT32:DA32DG33_JJ K 33 ? J 33 ? K 32 ? J 32 ? 1 A DT 2 1_555 B DA 23 1_555 A DT 3 1_555 B DA 22 1_555 -0.100 -0.424 3.320 -2.369 2.375 37.489 -0.970 -0.157 3.288 3.686 3.677 37.633 2 KK_DT32DT31:DA31DA32_JJ K 32 ? J 32 ? K 31 ? J 31 ? 1 A DT 3 1_555 B DA 22 1_555 A DT 4 1_555 B DA 21 1_555 -0.321 0.101 3.178 0.425 0.268 32.096 0.136 0.655 3.175 0.485 -0.769 32.100 3 KK_DT31DT30:DA30DA31_JJ K 31 ? J 31 ? K 30 ? J 30 ? 1 A DT 4 1_555 B DA 21 1_555 A DT 5 1_555 B DA 20 1_555 -0.481 -0.278 3.294 -4.055 -2.512 37.827 -0.102 0.214 3.337 -3.856 6.224 38.115 4 KK_DT30DT29:DA29DA30_JJ K 30 ? J 30 ? K 29 ? J 29 ? 1 A DT 5 1_555 B DA 20 1_555 A DT 6 1_555 B DA 19 1_555 0.477 -0.176 3.385 2.693 3.158 38.838 -0.658 -0.377 3.385 4.733 -4.036 39.050 5 KK_DT29DT28:DA28DA29_JJ K 29 ? J 29 ? K 28 ? J 28 ? 1 A DT 6 1_555 B DA 19 1_555 A DT 7 1_555 B DA 18 1_555 -0.492 -0.111 3.324 -0.691 0.511 31.120 -0.307 0.783 3.332 0.952 1.288 31.132 6 KK_DT28DT27:DA27DA28_JJ K 28 ? J 28 ? K 27 ? J 27 ? 1 A DT 7 1_555 B DA 18 1_555 A DC 8 1_555 B DG 17 1_555 1.121 0.057 3.380 -1.746 1.068 35.748 -0.065 -2.081 3.324 1.738 2.841 35.805 7 KK_DT27DC26:DG26DA27_JJ K 27 ? J 27 ? K 26 ? J 26 ? 1 A DC 8 1_555 B DG 17 1_555 A DC 9 1_555 B DG 16 1_555 0.309 -0.109 3.150 0.230 8.875 32.879 -1.546 -0.493 3.021 15.334 -0.397 34.024 8 KK_DC26DC25:DG25DG26_JJ K 26 ? J 26 ? K 25 ? J 25 ? 1 A DC 9 1_555 B DG 16 1_555 A DT 10 1_555 B DA 15 1_555 -0.552 0.461 3.218 1.401 15.256 25.551 -2.376 1.377 2.981 31.177 -2.863 29.727 9 KK_DC25DT24:DA24DG25_JJ K 25 ? J 25 ? K 24 ? J 24 ? 1 A DT 10 1_555 B DA 15 1_555 A DA 11 1_555 B DT 14 1_555 -0.841 1.566 3.126 -3.540 -8.501 42.610 2.867 0.819 2.836 -11.537 4.805 43.548 10 KK_DT24DA23:DT23DA24_JJ K 24 ? J 24 ? K 23 ? J 23 ? 1 A DA 11 1_555 B DT 14 1_555 A DA 12 1_555 B DT 13 1_555 0.297 -0.495 3.177 0.954 -3.025 36.332 -0.381 -0.345 3.213 -4.841 -1.526 36.466 11 KK_DA23DA22:DT22DT23_JJ K 23 ? J 23 ? K 22 ? J 22 ? 1 A DA 12 1_555 B DT 13 1_555 A DA 13 1_555 B DT 12 1_555 -0.187 -0.745 3.385 -2.726 1.419 34.642 -1.470 -0.117 3.357 2.377 4.567 34.774 12 KK_DA22DA21:DT21DT22_JJ K 22 ? J 22 ? K 21 ? J 21 ? 1 A DA 13 1_555 B DT 12 1_555 A DA 14 1_555 B DT 11 1_555 -0.256 -0.689 3.034 -2.386 -11.393 38.829 0.231 0.113 3.116 -16.687 3.495 40.471 13 KK_DA21DA20:DT20DT21_JJ K 21 ? J 21 ? K 20 ? J 20 ? 1 A DA 14 1_555 B DT 11 1_555 A DT 15 1_555 B DA 10 1_555 0.170 -0.846 3.476 3.925 1.833 34.674 -1.703 0.345 3.426 3.061 -6.554 34.936 14 KK_DA20DT19:DA19DT20_JJ K 20 ? J 20 ? K 19 ? J 19 ? 1 A DT 15 1_555 B DA 10 1_555 A DG 16 1_555 B DC 9 1_555 0.451 1.170 3.419 -1.068 -9.625 33.838 3.369 -0.905 2.970 -16.131 1.791 35.158 15 KK_DT19DG18:DC18DA19_JJ K 19 ? J 19 ? K 18 ? J 18 ? 1 A DG 16 1_555 B DC 9 1_555 A DT 17 1_555 B DA 8 1_555 0.223 0.211 3.147 6.316 4.835 29.375 -0.543 0.809 3.120 9.321 -12.176 30.410 16 KK_DG18DT17:DA17DC18_JJ K 18 ? J 18 ? K 17 ? J 17 ? 1 A DT 17 1_555 B DA 8 1_555 A DG 18 1_555 B DC 7 1_555 0.025 2.093 5.335 7.202 43.988 21.642 -4.474 1.113 4.249 64.530 -10.565 49.307 17 KK_DT17DG16:DC16DA17_JJ K 17 ? J 17 ? K 16 ? J 16 ? 1 A DG 18 1_555 B DC 7 1_555 A DA 19 1_555 B DT 6 1_555 -0.200 1.879 3.161 -2.150 3.758 24.680 3.207 -0.183 3.409 8.706 4.981 25.051 18 KK_DG16DA15:DT15DC16_JJ K 16 ? J 16 ? K 15 ? J 15 ? 1 A DA 19 1_555 B DT 6 1_555 A DT 20 1_555 B DA 5 1_555 -0.011 -0.038 2.814 1.464 5.858 30.877 -1.013 0.255 2.756 10.872 -2.717 31.448 19 KK_DA15DT14:DA14DT15_JJ K 15 ? J 15 ? K 14 ? J 14 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE" CMP 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CGP _pdbx_initial_refinement_model.details ? #