HEADER HYDROLASE (CARBOXYLIC ESTER) 23-MAY-96 1LGY TITLE LIPASE II FROM RHIZOPUS NIVEUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIACYLGLYCEROL LIPASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: LIPASE; COMPND 5 EC: 3.1.1.3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOPUS NIVEUS; SOURCE 3 ORGANISM_TAXID: 4844; SOURCE 4 ATCC: 4759 KEYWDS LIPASE, HYDROLASE (CARBOXYLIC ESTER) EXPDTA X-RAY DIFFRACTION AUTHOR M.KOHNO,J.FUNATSU,B.MIKAMI,W.KUGIMIYA,T.MATSUO,Y.MORITA REVDAT 3 24-FEB-09 1LGY 1 VERSN REVDAT 2 01-APR-03 1LGY 1 JRNL REVDAT 1 23-DEC-96 1LGY 0 JRNL AUTH M.KOHNO,J.FUNATSU,B.MIKAMI,W.KUGIMIYA,T.MATSUO, JRNL AUTH 2 Y.MORITA JRNL TITL THE CRYSTAL STRUCTURE OF LIPASE II FROM RHIZOPUS JRNL TITL 2 NIVEUS AT 2.2 A RESOLUTION. JRNL REF J.BIOCHEM.(TOKYO) V. 120 505 1996 JRNL REFN ISSN 0021-924X JRNL PMID 8902613 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.KOHNO,W.KUGIMIYA,Y.HASHIMOTO,Y.MORITA REMARK 1 TITL PURIFICATION, CHARACTERIZATION AND CRYSTALLIZATION REMARK 1 TITL 2 OF TWO TYPES OF LIPASE FROM RHIZOPUS NIVEUS REMARK 1 REF BIOSCI.BIOTECHNOL.BIOCHEM. V. 58 1007 1994 REMARK 1 REFN ISSN 0916-8451 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.KOHNO,W.KUGIMIYA,Y.HASHIMOTO,Y.MORITA REMARK 1 TITL PRELIMINARY INVESTIGATION OF CRYSTALS OF LIPASE I REMARK 1 TITL 2 FROM RHIZOPUS NIVEUS REMARK 1 REF J.MOL.BIOL. V. 229 785 1993 REMARK 1 REFN ISSN 0022-2836 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TNT, X-PLOR REMARK 3 AUTHORS : TRONRUD,TEN EYCK,MATTHEWS REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 40601 REMARK 3 REMARK 3 USING DATA ABOVE SIGMA CUTOFF. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 USING ALL DATA, NO SIGMA CUTOFF. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6204 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 478 REMARK 3 REMARK 3 WILSON B VALUE (FROM FCALC, A**2) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. RMS WEIGHT COUNT REMARK 3 BOND LENGTHS (A) : 0.016 ; NULL ; NULL REMARK 3 BOND ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TORSION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES (DEGREES) : NULL ; NULL ; NULL REMARK 3 TRIGONAL CARBON PLANES (A) : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES (A) : NULL ; NULL ; NULL REMARK 3 ISOTROPIC THERMAL FACTORS (A**2) : NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS (A) : NULL ; NULL ; NULL REMARK 3 REMARK 3 INCORRECT CHIRAL-CENTERS (COUNT) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 RESTRAINT LIBRARIES. REMARK 3 STEREOCHEMISTRY : NULL REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CHARMM MEAN B VALUE 22.6 ANGSTROMS** REMARK 3 2 ESD FROM LUZZATI PLOT 0.30 ANGSTROMS X-PLOR ALSO WAS USED. REMARK 4 REMARK 4 1LGY COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JAN-92 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : RIGAKU REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53656 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.95000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.42500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.47500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 ASP A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 GLY B 3 REMARK 465 GLY B 4 REMARK 465 SER C 1 REMARK 465 ASP C 2 REMARK 465 GLY C 3 REMARK 465 GLY C 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 109 NE2 HIS A 109 CD2 -0.083 REMARK 500 HIS A 134 NE2 HIS A 134 CD2 -0.073 REMARK 500 HIS A 144 NE2 HIS A 144 CD2 -0.076 REMARK 500 HIS A 201 NE2 HIS A 201 CD2 -0.092 REMARK 500 HIS A 208 NE2 HIS A 208 CD2 -0.067 REMARK 500 HIS A 218 NE2 HIS A 218 CD2 -0.094 REMARK 500 HIS B 109 NE2 HIS B 109 CD2 -0.075 REMARK 500 HIS B 134 NE2 HIS B 134 CD2 -0.082 REMARK 500 HIS B 257 NE2 HIS B 257 CD2 -0.068 REMARK 500 HIS C 109 NE2 HIS C 109 CD2 -0.069 REMARK 500 HIS C 144 NE2 HIS C 144 CD2 -0.079 REMARK 500 HIS C 208 NE2 HIS C 208 CD2 -0.068 REMARK 500 HIS C 218 NE2 HIS C 218 CD2 -0.074 REMARK 500 HIS C 257 NE2 HIS C 257 CD2 -0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 30 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 TRP A 38 CD1 - CG - CD2 ANGL. DEV. = 7.1 DEGREES REMARK 500 TRP A 38 CE2 - CD2 - CG ANGL. DEV. = -6.1 DEGREES REMARK 500 CYS A 40 CB - CA - C ANGL. DEV. = 7.3 DEGREES REMARK 500 TRP A 46 CD1 - CG - CD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 TRP A 46 CE2 - CD2 - CG ANGL. DEV. = -5.6 DEGREES REMARK 500 LYS A 104 CA - CB - CG ANGL. DEV. = 17.8 DEGREES REMARK 500 TYR A 116 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 TYR A 137 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 161 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 161 NE - CZ - NH2 ANGL. DEV. = -7.0 DEGREES REMARK 500 ILE A 205 CB - CA - C ANGL. DEV. = -14.7 DEGREES REMARK 500 TRP A 224 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP A 224 CE2 - CD2 - CG ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG B 30 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG B 30 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 TRP B 38 CD1 - CG - CD2 ANGL. DEV. = 6.9 DEGREES REMARK 500 TRP B 38 CB - CG - CD1 ANGL. DEV. = -9.5 DEGREES REMARK 500 TRP B 38 CE2 - CD2 - CG ANGL. DEV. = -6.4 DEGREES REMARK 500 TRP B 38 CG - CD2 - CE3 ANGL. DEV. = 7.1 DEGREES REMARK 500 CYS B 40 CA - CB - SG ANGL. DEV. = 8.7 DEGREES REMARK 500 TRP B 46 CD1 - CG - CD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP B 46 CE2 - CD2 - CG ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 69 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 TYR B 100 CB - CG - CD2 ANGL. DEV. = -4.5 DEGREES REMARK 500 MET B 156 CG - SD - CE ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG B 161 NE - CZ - NH1 ANGL. DEV. = 3.7 DEGREES REMARK 500 TRP B 224 CD1 - CG - CD2 ANGL. DEV. = 5.2 DEGREES REMARK 500 TRP B 224 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 TRP B 224 CG - CD2 - CE3 ANGL. DEV. = 6.2 DEGREES REMARK 500 TRP C 38 CD1 - CG - CD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 TRP C 38 CE2 - CD2 - CG ANGL. DEV. = -6.6 DEGREES REMARK 500 TRP C 46 CD1 - CG - CD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 TRP C 46 CE2 - CD2 - CG ANGL. DEV. = -6.0 DEGREES REMARK 500 TRP C 46 CG - CD2 - CE3 ANGL. DEV. = 5.8 DEGREES REMARK 500 VAL C 141 CG1 - CB - CG2 ANGL. DEV. = -9.9 DEGREES REMARK 500 ARG C 161 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG C 198 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ILE C 205 CB - CA - C ANGL. DEV. = -17.5 DEGREES REMARK 500 TRP C 224 CD1 - CG - CD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 TRP C 224 CE2 - CD2 - CG ANGL. DEV. = -5.8 DEGREES REMARK 500 THR C 252 N - CA - CB ANGL. DEV. = -12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 38 62.55 -111.73 REMARK 500 ASP A 92 40.22 -104.31 REMARK 500 PHE A 95 58.80 -97.16 REMARK 500 SER A 145 -123.44 47.53 REMARK 500 LYS A 202 -119.77 43.60 REMARK 500 THR A 229 -29.61 -147.72 REMARK 500 CYS A 244 -117.23 -105.49 REMARK 500 TRP B 38 79.14 -116.53 REMARK 500 ASP B 39 10.40 -141.07 REMARK 500 PHE B 95 57.18 -106.99 REMARK 500 SER B 145 -128.07 65.01 REMARK 500 ASN B 182 -178.24 -64.20 REMARK 500 LYS B 202 -119.75 51.38 REMARK 500 GLU B 240 135.57 -36.40 REMARK 500 CYS B 244 -115.95 -96.19 REMARK 500 ASN C 36 41.05 71.51 REMARK 500 TRP C 38 76.26 -116.32 REMARK 500 ASP C 39 18.74 -146.76 REMARK 500 VAL C 47 75.67 -153.80 REMARK 500 SER C 85 70.87 -101.42 REMARK 500 SER C 145 -118.37 54.26 REMARK 500 LYS C 202 -104.19 29.05 REMARK 500 PRO C 207 -9.45 -58.57 REMARK 500 ILE C 225 97.30 -65.96 REMARK 500 SER C 227 136.58 -177.80 REMARK 500 THR C 229 -8.72 -140.44 REMARK 500 CYS C 244 -113.99 -104.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 116 0.07 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 453 DISTANCE = 5.56 ANGSTROMS REMARK 525 HOH B 454 DISTANCE = 5.42 ANGSTROMS REMARK 525 HOH C 561 DISTANCE = 5.48 ANGSTROMS REMARK 525 HOH B 467 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH C 574 DISTANCE = 7.38 ANGSTROMS REMARK 525 HOH A 367 DISTANCE = 6.75 ANGSTROMS REMARK 525 HOH C 583 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH C 587 DISTANCE = 5.03 ANGSTROMS REMARK 525 HOH C 588 DISTANCE = 5.55 ANGSTROMS REMARK 525 HOH C 589 DISTANCE = 5.69 ANGSTROMS REMARK 525 HOH B 488 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 496 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH A 394 DISTANCE = 5.41 ANGSTROMS REMARK 525 HOH C 610 DISTANCE = 5.47 ANGSTROMS REMARK 525 HOH A 403 DISTANCE = 7.25 ANGSTROMS REMARK 525 HOH C 619 DISTANCE = 5.11 ANGSTROMS REMARK 525 HOH A 408 DISTANCE = 5.69 ANGSTROMS REMARK 525 HOH A 631 DISTANCE = 7.78 ANGSTROMS REMARK 525 HOH B 642 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH A 633 DISTANCE = 5.38 ANGSTROMS REMARK 525 HOH C 627 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B 646 DISTANCE = 5.32 ANGSTROMS REMARK 525 HOH B 647 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH B 668 DISTANCE = 7.02 ANGSTROMS REMARK 525 HOH B 669 DISTANCE = 5.16 ANGSTROMS REMARK 525 HOH A 694 DISTANCE = 5.61 ANGSTROMS REMARK 525 HOH B 670 DISTANCE = 6.39 ANGSTROMS REMARK 525 HOH B 673 DISTANCE = 5.60 ANGSTROMS REMARK 525 HOH B 680 DISTANCE = 8.38 ANGSTROMS REMARK 525 HOH B 706 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH C 658 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH C 662 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH C 664 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH C 665 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH C 666 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH C 667 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH C 675 DISTANCE = 9.30 ANGSTROMS REMARK 525 HOH C 676 DISTANCE = 7.60 ANGSTROMS REMARK 525 HOH B 720 DISTANCE = 5.30 ANGSTROMS REMARK 525 HOH B 746 DISTANCE = 11.82 ANGSTROMS REMARK 525 HOH C 681 DISTANCE = 8.49 ANGSTROMS REMARK 525 HOH B 748 DISTANCE = 8.01 ANGSTROMS REMARK 525 HOH C 683 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH C 685 DISTANCE = 9.77 ANGSTROMS REMARK 525 HOH C 732 DISTANCE = 5.20 ANGSTROMS REMARK 525 HOH C 736 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH C 747 DISTANCE = 12.55 ANGSTROMS REMARK 525 HOH C 767 DISTANCE = 5.33 ANGSTROMS REMARK 525 HOH C 774 DISTANCE = 6.77 ANGSTROMS REMARK 525 HOH C 776 DISTANCE = 10.75 ANGSTROMS REMARK 525 HOH C 777 DISTANCE = 11.57 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: CAT REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: CATALYTIC SITE DBREF 1LGY A 1 269 UNP P61871 LIP_RHINI 124 392 DBREF 1LGY B 1 269 UNP P61871 LIP_RHINI 124 392 DBREF 1LGY C 1 269 UNP P61871 LIP_RHINI 124 392 SEQRES 1 A 269 SER ASP GLY GLY LYS VAL VAL ALA ALA THR THR ALA GLN SEQRES 2 A 269 ILE GLN GLU PHE THR LYS TYR ALA GLY ILE ALA ALA THR SEQRES 3 A 269 ALA TYR CYS ARG SER VAL VAL PRO GLY ASN LYS TRP ASP SEQRES 4 A 269 CYS VAL GLN CYS GLN LYS TRP VAL PRO ASP GLY LYS ILE SEQRES 5 A 269 ILE THR THR PHE THR SER LEU LEU SER ASP THR ASN GLY SEQRES 6 A 269 TYR VAL LEU ARG SER ASP LYS GLN LYS THR ILE TYR LEU SEQRES 7 A 269 VAL PHE ARG GLY THR ASN SER PHE ARG SER ALA ILE THR SEQRES 8 A 269 ASP ILE VAL PHE ASN PHE SER ASP TYR LYS PRO VAL LYS SEQRES 9 A 269 GLY ALA LYS VAL HIS ALA GLY PHE LEU SER SER TYR GLU SEQRES 10 A 269 GLN VAL VAL ASN ASP TYR PHE PRO VAL VAL GLN GLU GLN SEQRES 11 A 269 LEU THR ALA HIS PRO THR TYR LYS VAL ILE VAL THR GLY SEQRES 12 A 269 HIS SER LEU GLY GLY ALA GLN ALA LEU LEU ALA GLY MET SEQRES 13 A 269 ASP LEU TYR GLN ARG GLU PRO ARG LEU SER PRO LYS ASN SEQRES 14 A 269 LEU SER ILE PHE THR VAL GLY GLY PRO ARG VAL GLY ASN SEQRES 15 A 269 PRO THR PHE ALA TYR TYR VAL GLU SER THR GLY ILE PRO SEQRES 16 A 269 PHE GLN ARG THR VAL HIS LYS ARG ASP ILE VAL PRO HIS SEQRES 17 A 269 VAL PRO PRO GLN SER PHE GLY PHE LEU HIS PRO GLY VAL SEQRES 18 A 269 GLU SER TRP ILE LYS SER GLY THR SER ASN VAL GLN ILE SEQRES 19 A 269 CYS THR SER GLU ILE GLU THR LYS ASP CYS SER ASN SER SEQRES 20 A 269 ILE VAL PRO PHE THR SER ILE LEU ASP HIS LEU SER TYR SEQRES 21 A 269 PHE ASP ILE ASN GLU GLY SER CYS LEU SEQRES 1 B 269 SER ASP GLY GLY LYS VAL VAL ALA ALA THR THR ALA GLN SEQRES 2 B 269 ILE GLN GLU PHE THR LYS TYR ALA GLY ILE ALA ALA THR SEQRES 3 B 269 ALA TYR CYS ARG SER VAL VAL PRO GLY ASN LYS TRP ASP SEQRES 4 B 269 CYS VAL GLN CYS GLN LYS TRP VAL PRO ASP GLY LYS ILE SEQRES 5 B 269 ILE THR THR PHE THR SER LEU LEU SER ASP THR ASN GLY SEQRES 6 B 269 TYR VAL LEU ARG SER ASP LYS GLN LYS THR ILE TYR LEU SEQRES 7 B 269 VAL PHE ARG GLY THR ASN SER PHE ARG SER ALA ILE THR SEQRES 8 B 269 ASP ILE VAL PHE ASN PHE SER ASP TYR LYS PRO VAL LYS SEQRES 9 B 269 GLY ALA LYS VAL HIS ALA GLY PHE LEU SER SER TYR GLU SEQRES 10 B 269 GLN VAL VAL ASN ASP TYR PHE PRO VAL VAL GLN GLU GLN SEQRES 11 B 269 LEU THR ALA HIS PRO THR TYR LYS VAL ILE VAL THR GLY SEQRES 12 B 269 HIS SER LEU GLY GLY ALA GLN ALA LEU LEU ALA GLY MET SEQRES 13 B 269 ASP LEU TYR GLN ARG GLU PRO ARG LEU SER PRO LYS ASN SEQRES 14 B 269 LEU SER ILE PHE THR VAL GLY GLY PRO ARG VAL GLY ASN SEQRES 15 B 269 PRO THR PHE ALA TYR TYR VAL GLU SER THR GLY ILE PRO SEQRES 16 B 269 PHE GLN ARG THR VAL HIS LYS ARG ASP ILE VAL PRO HIS SEQRES 17 B 269 VAL PRO PRO GLN SER PHE GLY PHE LEU HIS PRO GLY VAL SEQRES 18 B 269 GLU SER TRP ILE LYS SER GLY THR SER ASN VAL GLN ILE SEQRES 19 B 269 CYS THR SER GLU ILE GLU THR LYS ASP CYS SER ASN SER SEQRES 20 B 269 ILE VAL PRO PHE THR SER ILE LEU ASP HIS LEU SER TYR SEQRES 21 B 269 PHE ASP ILE ASN GLU GLY SER CYS LEU SEQRES 1 C 269 SER ASP GLY GLY LYS VAL VAL ALA ALA THR THR ALA GLN SEQRES 2 C 269 ILE GLN GLU PHE THR LYS TYR ALA GLY ILE ALA ALA THR SEQRES 3 C 269 ALA TYR CYS ARG SER VAL VAL PRO GLY ASN LYS TRP ASP SEQRES 4 C 269 CYS VAL GLN CYS GLN LYS TRP VAL PRO ASP GLY LYS ILE SEQRES 5 C 269 ILE THR THR PHE THR SER LEU LEU SER ASP THR ASN GLY SEQRES 6 C 269 TYR VAL LEU ARG SER ASP LYS GLN LYS THR ILE TYR LEU SEQRES 7 C 269 VAL PHE ARG GLY THR ASN SER PHE ARG SER ALA ILE THR SEQRES 8 C 269 ASP ILE VAL PHE ASN PHE SER ASP TYR LYS PRO VAL LYS SEQRES 9 C 269 GLY ALA LYS VAL HIS ALA GLY PHE LEU SER SER TYR GLU SEQRES 10 C 269 GLN VAL VAL ASN ASP TYR PHE PRO VAL VAL GLN GLU GLN SEQRES 11 C 269 LEU THR ALA HIS PRO THR TYR LYS VAL ILE VAL THR GLY SEQRES 12 C 269 HIS SER LEU GLY GLY ALA GLN ALA LEU LEU ALA GLY MET SEQRES 13 C 269 ASP LEU TYR GLN ARG GLU PRO ARG LEU SER PRO LYS ASN SEQRES 14 C 269 LEU SER ILE PHE THR VAL GLY GLY PRO ARG VAL GLY ASN SEQRES 15 C 269 PRO THR PHE ALA TYR TYR VAL GLU SER THR GLY ILE PRO SEQRES 16 C 269 PHE GLN ARG THR VAL HIS LYS ARG ASP ILE VAL PRO HIS SEQRES 17 C 269 VAL PRO PRO GLN SER PHE GLY PHE LEU HIS PRO GLY VAL SEQRES 18 C 269 GLU SER TRP ILE LYS SER GLY THR SER ASN VAL GLN ILE SEQRES 19 C 269 CYS THR SER GLU ILE GLU THR LYS ASP CYS SER ASN SER SEQRES 20 C 269 ILE VAL PRO PHE THR SER ILE LEU ASP HIS LEU SER TYR SEQRES 21 C 269 PHE ASP ILE ASN GLU GLY SER CYS LEU FORMUL 4 HOH *478(H2 O) HELIX 1 1 THR A 11 TYR A 28 1 18 HELIX 2 2 VAL A 41 TRP A 46 1 6 HELIX 3 3 PHE A 86 THR A 91 1 6 HELIX 4 4 ALA A 110 ALA A 133 1 24 HELIX 5 5 SER A 145 ARG A 161 5 17 HELIX 6 6 PRO A 183 THR A 192 1 10 HELIX 7 7 VAL A 206 HIS A 208 5 3 HELIX 8 8 GLN A 212 PHE A 214 5 3 HELIX 9 9 SER A 245 SER A 247 5 3 HELIX 10 10 LEU A 255 LEU A 258 5 4 HELIX 11 11 THR B 11 TYR B 28 1 18 HELIX 12 12 VAL B 41 TRP B 46 1 6 HELIX 13 13 PHE B 86 ASP B 92 1 7 HELIX 14 14 ALA B 110 ALA B 133 1 24 HELIX 15 15 SER B 145 ARG B 161 5 17 HELIX 16 16 PRO B 183 THR B 192 1 10 HELIX 17 17 VAL B 206 HIS B 208 5 3 HELIX 18 18 GLN B 212 PHE B 214 5 3 HELIX 19 19 SER B 245 ILE B 248 5 4 HELIX 20 20 ILE B 254 ASP B 256 5 3 HELIX 21 21 THR C 11 TYR C 28 1 18 HELIX 22 22 VAL C 41 TRP C 46 1 6 HELIX 23 23 ASP C 71 GLN C 73 5 3 HELIX 24 24 PHE C 86 ASP C 92 1 7 HELIX 25 25 ALA C 110 ALA C 133 1 24 HELIX 26 26 SER C 145 ARG C 161 5 17 HELIX 27 27 PRO C 183 SER C 191 1 9 HELIX 28 28 VAL C 206 HIS C 208 5 3 HELIX 29 29 GLN C 212 PHE C 214 5 3 HELIX 30 30 SER C 245 ILE C 248 5 4 HELIX 31 31 ILE C 254 HIS C 257 5 4 SHEET 1 A 9 VAL A 6 ALA A 8 0 SHEET 2 A 9 ASN A 231 CYS A 235 -1 N ILE A 234 O VAL A 7 SHEET 3 A 9 VAL A 221 SER A 227 -1 N SER A 227 O ASN A 231 SHEET 4 A 9 PRO A 195 HIS A 201 1 N ARG A 198 O VAL A 221 SHEET 5 A 9 LEU A 170 VAL A 175 1 N ILE A 172 O PRO A 195 SHEET 6 A 9 LYS A 138 HIS A 144 1 N VAL A 139 O SER A 171 SHEET 7 A 9 THR A 75 ARG A 81 1 N ILE A 76 O LYS A 138 SHEET 8 A 9 THR A 63 SER A 70 -1 N SER A 70 O THR A 75 SHEET 9 A 9 LYS A 51 SER A 58 -1 N SER A 58 O THR A 63 SHEET 1 B 2 PHE A 97 ASP A 99 0 SHEET 2 B 2 LYS A 107 HIS A 109 -1 N VAL A 108 O SER A 98 SHEET 1 C 9 VAL B 6 ALA B 8 0 SHEET 2 C 9 ASN B 231 CYS B 235 -1 N ILE B 234 O VAL B 7 SHEET 3 C 9 VAL B 221 SER B 227 -1 N SER B 227 O ASN B 231 SHEET 4 C 9 PHE B 196 HIS B 201 1 N ARG B 198 O VAL B 221 SHEET 5 C 9 LEU B 170 VAL B 175 1 N ILE B 172 O GLN B 197 SHEET 6 C 9 LYS B 138 HIS B 144 1 N VAL B 139 O SER B 171 SHEET 7 C 9 THR B 75 ARG B 81 1 N ILE B 76 O LYS B 138 SHEET 8 C 9 THR B 63 SER B 70 -1 N SER B 70 O THR B 75 SHEET 9 C 9 LYS B 51 SER B 58 -1 N SER B 58 O THR B 63 SHEET 1 D 2 PHE B 97 ASP B 99 0 SHEET 2 D 2 LYS B 107 HIS B 109 -1 N VAL B 108 O SER B 98 SHEET 1 E 9 VAL C 6 ALA C 8 0 SHEET 2 E 9 ASN C 231 CYS C 235 -1 N ILE C 234 O VAL C 7 SHEET 3 E 9 VAL C 221 SER C 227 -1 N SER C 227 O ASN C 231 SHEET 4 E 9 PRO C 195 HIS C 201 1 N ARG C 198 O VAL C 221 SHEET 5 E 9 LEU C 170 VAL C 175 1 N ILE C 172 O PRO C 195 SHEET 6 E 9 LYS C 138 HIS C 144 1 N VAL C 139 O SER C 171 SHEET 7 E 9 THR C 75 ARG C 81 1 N ILE C 76 O LYS C 138 SHEET 8 E 9 THR C 63 SER C 70 -1 N SER C 70 O THR C 75 SHEET 9 E 9 LYS C 51 SER C 58 -1 N SER C 58 O THR C 63 SHEET 1 F 2 PHE C 97 ASP C 99 0 SHEET 2 F 2 LYS C 107 HIS C 109 -1 N VAL C 108 O SER C 98 SSBOND 1 CYS A 29 CYS A 268 1555 1555 2.01 SSBOND 2 CYS A 40 CYS A 43 1555 1555 2.01 SSBOND 3 CYS A 235 CYS A 244 1555 1555 2.01 SSBOND 4 CYS B 29 CYS B 268 1555 1555 2.03 SSBOND 5 CYS B 40 CYS B 43 1555 1555 2.01 SSBOND 6 CYS B 235 CYS B 244 1555 1555 2.01 SSBOND 7 CYS C 29 CYS C 268 1555 1555 2.00 SSBOND 8 CYS C 40 CYS C 43 1555 1555 2.01 SSBOND 9 CYS C 235 CYS C 244 1555 1555 2.04 CISPEP 1 VAL A 33 PRO A 34 0 4.07 CISPEP 2 VAL A 209 PRO A 210 0 -19.29 CISPEP 3 VAL A 249 PRO A 250 0 0.25 CISPEP 4 VAL B 33 PRO B 34 0 17.46 CISPEP 5 VAL B 209 PRO B 210 0 -27.34 CISPEP 6 VAL B 249 PRO B 250 0 -0.53 CISPEP 7 VAL C 33 PRO C 34 0 2.08 CISPEP 8 VAL C 209 PRO C 210 0 -15.87 CISPEP 9 VAL C 249 PRO C 250 0 1.39 SITE 1 CAT 3 SER A 145 ASP A 204 HIS A 257 CRYST1 83.700 83.700 137.900 90.00 90.00 90.00 P 43 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011947 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011947 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007252 0.00000 MTRIX1 1 -0.999623 0.025854 -0.009201 123.02810 1 MTRIX2 1 -0.026266 -0.998509 0.047852 124.36960 1 MTRIX3 1 -0.007951 0.048076 0.998812 -2.09610 1 MTRIX1 2 -0.071585 -0.698060 0.712452 77.62610 1 MTRIX2 2 -0.608659 0.596448 0.523244 54.86810 1 MTRIX3 2 -0.790196 -0.396184 -0.467577 140.70500 1