HEADER OXIDOREDUCTASE 09-MAY-02 1LQA TITLE TAS PROTEIN FROM ESCHERICHIA COLI IN COMPLEX WITH NADPH COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAS PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: TAS; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: B834; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: DESTINATION VECTOR; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS TIM BARREL, STRUCTURE 2 FUNCTION PROJECT, S2F, STRUCTURAL GENOMICS, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.OBMOLOVA,A.TEPLYAKOV,P.P.KHIL,A.J.HOWARD,R.D.CAMERINI-OTERO, AUTHOR 2 G.L.GILLILAND,STRUCTURE 2 FUNCTION PROJECT (S2F) REVDAT 5 14-FEB-24 1LQA 1 REMARK REVDAT 4 13-JUL-11 1LQA 1 VERSN REVDAT 3 24-FEB-09 1LQA 1 VERSN REVDAT 2 14-OCT-03 1LQA 1 JRNL REVDAT 1 08-JUL-03 1LQA 0 JRNL AUTH G.OBMOLOVA,A.TEPLYAKOV,P.P.KHIL,A.J.HOWARD, JRNL AUTH 2 R.D.CAMERINI-OTERO,G.L.GILLILAND JRNL TITL CRYSTAL STRUCTURE OF THE ESCHERICHIA COLI TAS PROTEIN, AN JRNL TITL 2 NADP(H)-DEPENDENT ALDO-KETO REDUCTASE JRNL REF PROTEINS: V. 53 323 2003 JRNL REF 2 STRUCT.,FUNCT.,GENET. JRNL REFN ISSN 0887-3585 JRNL PMID 14519207 JRNL DOI 10.1186/1472-6807-3-7 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 81579 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2508 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3650 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1530 REMARK 3 BIN FREE R VALUE SET COUNT : 108 REMARK 3 BIN FREE R VALUE : 0.1910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5432 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 866 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5663 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7713 ; 1.796 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 690 ; 4.508 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 976 ;16.689 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 855 ; 0.126 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4319 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2702 ; 0.218 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 713 ; 0.145 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 84 ; 0.566 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 46 ; 0.260 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3447 ; 3.113 ; 4.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5539 ; 5.286 ; 8.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2216 ; 6.497 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2174 ; 9.422 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1LQA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-02. REMARK 100 THE DEPOSITION ID IS D_1000016180. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0072 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 84533 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.17500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, 15% PEG8000, 50MM AMMONIUM REMARK 280 SULFATE, 0.2M MAGNESIUM CHLORIDE, 10MM NADPH, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.15000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.51000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.73000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.51000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.15000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.73000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N1A NDP B 1401 O HOH B 1769 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 250 CD2 HIS B 323 3645 1.64 REMARK 500 NZ LYS A 97 OD1 ASP B 279 3645 2.13 REMARK 500 CD LYS A 250 CD2 HIS B 323 3645 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 148 CB TRP A 148 CG -0.212 REMARK 500 TRP B 148 CB TRP B 148 CG -0.208 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 106 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP A 148 CB - CA - C ANGL. DEV. = -13.2 DEGREES REMARK 500 ASP A 279 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 TRP B 148 CB - CA - C ANGL. DEV. = -12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 20 10.44 -141.30 REMARK 500 GLU A 25 -90.43 -120.16 REMARK 500 SER A 78 28.94 49.27 REMARK 500 LEU A 105 49.69 -96.29 REMARK 500 TYR A 343 58.21 38.15 REMARK 500 SER B 9 175.80 179.72 REMARK 500 THR B 20 11.68 -141.77 REMARK 500 GLU B 25 -86.33 -122.10 REMARK 500 ARG B 93 -45.75 -18.17 REMARK 500 ASN B 94 -92.99 -48.26 REMARK 500 ASP B 96 -56.37 -19.22 REMARK 500 LEU B 105 48.67 -93.35 REMARK 500 ASP B 150 43.24 -103.50 REMARK 500 SER B 151 97.48 -168.95 REMARK 500 ARG B 174 -60.10 -91.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP A 1400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NDP B 1401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: B2834 RELATED DB: TARGETDB DBREF 1LQA A 1 346 UNP P0A9T4 TAS_ECOLI 1 346 DBREF 1LQA B 1 346 UNP P0A9T4 TAS_ECOLI 1 346 SEQRES 1 A 346 MET GLN TYR HIS ARG ILE PRO HIS SER SER LEU GLU VAL SEQRES 2 A 346 SER THR LEU GLY LEU GLY THR MET THR PHE GLY GLU GLN SEQRES 3 A 346 ASN SER GLU ALA ASP ALA HIS ALA GLN LEU ASP TYR ALA SEQRES 4 A 346 VAL ALA GLN GLY ILE ASN LEU ILE ASP VAL ALA GLU MET SEQRES 5 A 346 TYR PRO VAL PRO PRO ARG PRO GLU THR GLN GLY LEU THR SEQRES 6 A 346 GLU THR TYR VAL GLY ASN TRP LEU ALA LYS HIS GLY SER SEQRES 7 A 346 ARG GLU LYS LEU ILE ILE ALA SER LYS VAL SER GLY PRO SEQRES 8 A 346 SER ARG ASN ASN ASP LYS GLY ILE ARG PRO ASP GLN ALA SEQRES 9 A 346 LEU ASP ARG LYS ASN ILE ARG GLU ALA LEU HIS ASP SER SEQRES 10 A 346 LEU LYS ARG LEU GLN THR ASP TYR LEU ASP LEU TYR GLN SEQRES 11 A 346 VAL HIS TRP PRO GLN ARG PRO THR ASN CYS PHE GLY LYS SEQRES 12 A 346 LEU GLY TYR SER TRP THR ASP SER ALA PRO ALA VAL SER SEQRES 13 A 346 LEU LEU ASP THR LEU ASP ALA LEU ALA GLU TYR GLN ARG SEQRES 14 A 346 ALA GLY LYS ILE ARG TYR ILE GLY VAL SER ASN GLU THR SEQRES 15 A 346 ALA PHE GLY VAL MET ARG TYR LEU HIS LEU ALA ASP LYS SEQRES 16 A 346 HIS ASP LEU PRO ARG ILE VAL THR ILE GLN ASN PRO TYR SEQRES 17 A 346 SER LEU LEU ASN ARG SER PHE GLU VAL GLY LEU ALA GLU SEQRES 18 A 346 VAL SER GLN TYR GLU GLY VAL GLU LEU LEU ALA TYR SER SEQRES 19 A 346 CYS LEU GLY PHE GLY THR LEU THR GLY LYS TYR LEU ASN SEQRES 20 A 346 GLY ALA LYS PRO ALA GLY ALA ARG ASN THR LEU PHE SER SEQRES 21 A 346 ARG PHE THR ARG TYR SER GLY GLU GLN THR GLN LYS ALA SEQRES 22 A 346 VAL ALA ALA TYR VAL ASP ILE ALA ARG ARG HIS GLY LEU SEQRES 23 A 346 ASP PRO ALA GLN MET ALA LEU ALA PHE VAL ARG ARG GLN SEQRES 24 A 346 PRO PHE VAL ALA SER THR LEU LEU GLY ALA THR THR MET SEQRES 25 A 346 ASP GLN LEU LYS THR ASN ILE GLU SER LEU HIS LEU GLU SEQRES 26 A 346 LEU SER GLU ASP VAL LEU ALA GLU ILE GLU ALA VAL HIS SEQRES 27 A 346 GLN VAL TYR THR TYR PRO ALA PRO SEQRES 1 B 346 MET GLN TYR HIS ARG ILE PRO HIS SER SER LEU GLU VAL SEQRES 2 B 346 SER THR LEU GLY LEU GLY THR MET THR PHE GLY GLU GLN SEQRES 3 B 346 ASN SER GLU ALA ASP ALA HIS ALA GLN LEU ASP TYR ALA SEQRES 4 B 346 VAL ALA GLN GLY ILE ASN LEU ILE ASP VAL ALA GLU MET SEQRES 5 B 346 TYR PRO VAL PRO PRO ARG PRO GLU THR GLN GLY LEU THR SEQRES 6 B 346 GLU THR TYR VAL GLY ASN TRP LEU ALA LYS HIS GLY SER SEQRES 7 B 346 ARG GLU LYS LEU ILE ILE ALA SER LYS VAL SER GLY PRO SEQRES 8 B 346 SER ARG ASN ASN ASP LYS GLY ILE ARG PRO ASP GLN ALA SEQRES 9 B 346 LEU ASP ARG LYS ASN ILE ARG GLU ALA LEU HIS ASP SER SEQRES 10 B 346 LEU LYS ARG LEU GLN THR ASP TYR LEU ASP LEU TYR GLN SEQRES 11 B 346 VAL HIS TRP PRO GLN ARG PRO THR ASN CYS PHE GLY LYS SEQRES 12 B 346 LEU GLY TYR SER TRP THR ASP SER ALA PRO ALA VAL SER SEQRES 13 B 346 LEU LEU ASP THR LEU ASP ALA LEU ALA GLU TYR GLN ARG SEQRES 14 B 346 ALA GLY LYS ILE ARG TYR ILE GLY VAL SER ASN GLU THR SEQRES 15 B 346 ALA PHE GLY VAL MET ARG TYR LEU HIS LEU ALA ASP LYS SEQRES 16 B 346 HIS ASP LEU PRO ARG ILE VAL THR ILE GLN ASN PRO TYR SEQRES 17 B 346 SER LEU LEU ASN ARG SER PHE GLU VAL GLY LEU ALA GLU SEQRES 18 B 346 VAL SER GLN TYR GLU GLY VAL GLU LEU LEU ALA TYR SER SEQRES 19 B 346 CYS LEU GLY PHE GLY THR LEU THR GLY LYS TYR LEU ASN SEQRES 20 B 346 GLY ALA LYS PRO ALA GLY ALA ARG ASN THR LEU PHE SER SEQRES 21 B 346 ARG PHE THR ARG TYR SER GLY GLU GLN THR GLN LYS ALA SEQRES 22 B 346 VAL ALA ALA TYR VAL ASP ILE ALA ARG ARG HIS GLY LEU SEQRES 23 B 346 ASP PRO ALA GLN MET ALA LEU ALA PHE VAL ARG ARG GLN SEQRES 24 B 346 PRO PHE VAL ALA SER THR LEU LEU GLY ALA THR THR MET SEQRES 25 B 346 ASP GLN LEU LYS THR ASN ILE GLU SER LEU HIS LEU GLU SEQRES 26 B 346 LEU SER GLU ASP VAL LEU ALA GLU ILE GLU ALA VAL HIS SEQRES 27 B 346 GLN VAL TYR THR TYR PRO ALA PRO HET NDP A1400 48 HET NDP B1401 48 HETNAM NDP NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM 2 NDP PHOSPHATE FORMUL 3 NDP 2(C21 H30 N7 O17 P3) FORMUL 5 HOH *866(H2 O) HELIX 1 1 SER A 28 GLN A 42 1 15 HELIX 2 2 GLY A 63 GLY A 77 1 15 HELIX 3 3 SER A 78 LEU A 82 5 5 HELIX 4 4 ASP A 106 GLN A 122 1 17 HELIX 5 5 SER A 156 ALA A 170 1 15 HELIX 6 6 THR A 182 ASP A 197 1 16 HELIX 7 7 SER A 214 GLY A 227 1 14 HELIX 8 8 LEU A 236 GLY A 243 5 8 HELIX 9 9 TYR A 245 ALA A 249 5 5 HELIX 10 10 ALA A 254 PHE A 259 1 6 HELIX 11 11 GLY A 267 HIS A 284 1 18 HELIX 12 12 ASP A 287 ARG A 298 1 12 HELIX 13 13 THR A 311 GLU A 320 1 10 HELIX 14 14 SER A 321 LEU A 324 5 4 HELIX 15 15 SER A 327 TYR A 341 1 15 HELIX 16 16 SER B 28 GLN B 42 1 15 HELIX 17 17 GLY B 63 GLY B 77 1 15 HELIX 18 18 SER B 78 LEU B 82 5 5 HELIX 19 19 ASP B 106 GLN B 122 1 17 HELIX 20 20 SER B 156 ALA B 170 1 15 HELIX 21 21 THR B 182 ASP B 197 1 16 HELIX 22 22 SER B 214 GLY B 227 1 14 HELIX 23 23 LEU B 236 GLY B 243 5 8 HELIX 24 24 TYR B 245 ALA B 249 5 5 HELIX 25 25 ALA B 254 PHE B 259 1 6 HELIX 26 26 GLY B 267 HIS B 284 1 18 HELIX 27 27 ASP B 287 ARG B 298 1 12 HELIX 28 28 THR B 311 SER B 321 1 11 HELIX 29 29 LEU B 322 LEU B 324 5 3 HELIX 30 30 SER B 327 TYR B 341 1 15 SHEET 1 A 2 TYR A 3 ARG A 5 0 SHEET 2 A 2 GLU A 12 SER A 14 -1 O VAL A 13 N HIS A 4 SHEET 1 B 9 LEU A 16 GLY A 19 0 SHEET 2 B 9 LEU A 46 ASP A 48 1 O LEU A 46 N LEU A 18 SHEET 3 B 9 ILE A 83 VAL A 88 1 O ALA A 85 N ILE A 47 SHEET 4 B 9 LEU A 126 VAL A 131 1 O GLN A 130 N VAL A 88 SHEET 5 B 9 ILE A 173 SER A 179 1 O GLY A 177 N TYR A 129 SHEET 6 B 9 THR A 203 PRO A 207 1 O GLN A 205 N VAL A 178 SHEET 7 B 9 GLU A 229 TYR A 233 1 O LEU A 231 N ILE A 204 SHEET 8 B 9 VAL A 302 LEU A 307 1 O LEU A 306 N ALA A 232 SHEET 9 B 9 LEU A 16 GLY A 19 1 N GLY A 17 O THR A 305 SHEET 1 C 2 TYR B 3 ARG B 5 0 SHEET 2 C 2 GLU B 12 SER B 14 -1 O VAL B 13 N HIS B 4 SHEET 1 D 9 LEU B 16 GLY B 19 0 SHEET 2 D 9 LEU B 46 ASP B 48 1 O LEU B 46 N LEU B 18 SHEET 3 D 9 ILE B 83 VAL B 88 1 O ALA B 85 N ILE B 47 SHEET 4 D 9 LEU B 126 VAL B 131 1 O GLN B 130 N VAL B 88 SHEET 5 D 9 ILE B 173 SER B 179 1 O TYR B 175 N TYR B 129 SHEET 6 D 9 THR B 203 PRO B 207 1 O GLN B 205 N VAL B 178 SHEET 7 D 9 GLU B 229 TYR B 233 1 O LEU B 231 N ILE B 204 SHEET 8 D 9 VAL B 302 LEU B 307 1 O LEU B 306 N ALA B 232 SHEET 9 D 9 LEU B 16 GLY B 19 1 N GLY B 17 O THR B 305 CISPEP 1 TYR A 53 PRO A 54 0 5.73 CISPEP 2 VAL A 55 PRO A 56 0 -3.19 CISPEP 3 TYR B 53 PRO B 54 0 7.52 CISPEP 4 VAL B 55 PRO B 56 0 -0.17 SITE 1 AC1 36 GLY A 19 THR A 20 MET A 21 GLN A 26 SITE 2 AC1 36 ASP A 48 TYR A 53 LYS A 87 HIS A 132 SITE 3 AC1 36 SER A 179 ASN A 180 GLN A 205 TYR A 233 SITE 4 AC1 36 SER A 234 CYS A 235 LEU A 236 GLY A 237 SITE 5 AC1 36 PHE A 238 GLY A 239 THR A 242 LYS A 244 SITE 6 AC1 36 ALA A 254 ARG A 255 LEU A 306 GLY A 308 SITE 7 AC1 36 THR A 310 GLN A 314 ASN A 318 HOH A1419 SITE 8 AC1 36 HOH A1425 HOH A1440 HOH A1441 HOH A1450 SITE 9 AC1 36 HOH A1451 HOH A1515 HOH A1669 HOH A1692 SITE 1 AC2 37 GLY B 19 THR B 20 MET B 21 GLN B 26 SITE 2 AC2 37 ASP B 48 TYR B 53 LYS B 87 HIS B 132 SITE 3 AC2 37 SER B 179 ASN B 180 GLN B 205 TYR B 233 SITE 4 AC2 37 SER B 234 CYS B 235 LEU B 236 GLY B 237 SITE 5 AC2 37 PHE B 238 GLY B 239 THR B 242 LYS B 244 SITE 6 AC2 37 ALA B 254 ARG B 255 ALA B 289 LEU B 306 SITE 7 AC2 37 GLY B 308 THR B 310 GLN B 314 ASN B 318 SITE 8 AC2 37 HOH B1425 HOH B1441 HOH B1443 HOH B1444 SITE 9 AC2 37 HOH B1451 HOH B1467 HOH B1511 HOH B1670 SITE 10 AC2 37 HOH B1769 CRYST1 58.300 81.460 145.020 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012276 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006896 0.00000