HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-JUN-02 1LXN TITLE X-RAY STRUCTURE OF MTH1187 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TITLE 2 TARGET TT272 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN MTH1187; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOBACTER THERMAUTOTROPHICUS; SOURCE 3 ORGANISM_TAXID: 145262; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYPOTHETICAL STRUCTURE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN KEYWDS 3 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR X.TAO,R.KHAYAT,D.CHRISTENDAT,A.SAVCHENKO,X.XU,A.EDWARDS, AUTHOR 2 C.H.ARROWSMITH,L.TONG,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 3 (NESG) REVDAT 5 06-NOV-24 1LXN 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1LXN 1 VERSN REVDAT 3 24-FEB-09 1LXN 1 VERSN REVDAT 2 25-JAN-05 1LXN 1 AUTHOR KEYWDS REMARK REVDAT 1 29-JUL-03 1LXN 0 JRNL AUTH X.TAO,R.KHAYAT,D.CHRISTENDAT,A.SAVCHENKO,X.XU, JRNL AUTH 2 S.GOLDSMITH-FISCHMAN,B.HONIG,A.EDWARDS,C.H.ARROWSMITH,L.TONG JRNL TITL CRYSTAL STRUCTURES OF MTH1187 AND ITS YEAST ORTHOLOG YBL001C JRNL REF PROTEINS V. 52 478 2003 JRNL REFN ISSN 0887-3585 JRNL PMID 12866058 JRNL DOI 10.1002/PROT.10443 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2127257.290 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 93.8 REMARK 3 NUMBER OF REFLECTIONS : 38721 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.700 REMARK 3 FREE R VALUE TEST SET COUNT : 2968 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.005 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.60 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5278 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 433 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3013 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 139 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.61000 REMARK 3 B22 (A**2) : -0.81000 REMARK 3 B33 (A**2) : -0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.27 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.31 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.21 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.005 REMARK 3 BOND ANGLES (DEGREES) : 1.200 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.630 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.360 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.180 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 3.130 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 4.390 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 31.81 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : PARAM.SO4 REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : TOP.SO4 REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1LXN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-02. REMARK 100 THE DEPOSITION ID IS D_1000016384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-02; 26-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; APS REMARK 200 BEAMLINE : X4A; 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791; 0.97799 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40380 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.68250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 87.68250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 87.68250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 87.68250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 87.68250 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 87.68250 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 87.68250 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 87.68250 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 87.68250 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 87.68250 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 87.68250 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 87.68250 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 87.68250 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 131.52375 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 43.84125 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 131.52375 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 131.52375 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 131.52375 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 43.84125 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 131.52375 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 43.84125 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 131.52375 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 43.84125 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 131.52375 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 43.84125 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 43.84125 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 131.52375 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 43.84125 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 131.52375 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 131.52375 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 131.52375 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 43.84125 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 131.52375 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 131.52375 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 43.84125 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 43.84125 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 43.84125 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 131.52375 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 43.84125 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 131.52375 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 43.84125 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 131.52375 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 131.52375 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 131.52375 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 13280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -182.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -43.84125 REMARK 350 BIOMT2 2 0.000000 0.000000 1.000000 43.84125 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 43.84125 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 131.67 -170.60 REMARK 500 ASN B1033 68.97 -111.34 REMARK 500 CYS C2014 32.56 -99.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 161 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 261 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 361 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 461 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 561 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 661 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1LXJ RELATED DB: PDB REMARK 900 X-RAY STRUCTURE OF YBL001C NORTHEAST STRUCTURAL GENOMICS CONSORTIUM REMARK 900 TARGET YTYST72 REMARK 900 RELATED ID: TT272 RELATED DB: TARGETDB DBREF 1LXN A 1 99 UNP O27255 Y1187_METTH 1 99 DBREF 1LXN B 1001 1099 UNP O27255 Y1187_METTH 1 99 DBREF 1LXN C 2001 2099 UNP O27255 Y1187_METTH 1 99 DBREF 1LXN D 3001 3099 UNP O27255 Y1187_METTH 1 99 SEQADV 1LXN MSE A 1 UNP O27255 MET 1 MODIFIED RESIDUE SEQADV 1LXN MSE A 41 UNP O27255 MET 41 MODIFIED RESIDUE SEQADV 1LXN MSE A 54 UNP O27255 MET 54 MODIFIED RESIDUE SEQADV 1LXN MSE B 1001 UNP O27255 MET 1 MODIFIED RESIDUE SEQADV 1LXN MSE B 1041 UNP O27255 MET 41 MODIFIED RESIDUE SEQADV 1LXN MSE B 1054 UNP O27255 MET 54 MODIFIED RESIDUE SEQADV 1LXN MSE C 2001 UNP O27255 MET 1 MODIFIED RESIDUE SEQADV 1LXN MSE C 2041 UNP O27255 MET 41 MODIFIED RESIDUE SEQADV 1LXN MSE C 2054 UNP O27255 MET 54 MODIFIED RESIDUE SEQADV 1LXN MSE D 3001 UNP O27255 MET 1 MODIFIED RESIDUE SEQADV 1LXN MSE D 3041 UNP O27255 MET 41 MODIFIED RESIDUE SEQADV 1LXN MSE D 3054 UNP O27255 MET 54 MODIFIED RESIDUE SEQRES 1 A 99 MSE ILE THR ALA GLU LEU THR VAL ILE PRO LEU GLY THR SEQRES 2 A 99 CYS SER THR SER LEU SER SER TYR VAL ALA ALA ALA VAL SEQRES 3 A 99 GLU ALA LEU LYS LYS LEU ASN VAL ARG TYR GLU ILE SER SEQRES 4 A 99 GLY MSE GLY THR LEU LEU GLU ALA GLU ASP LEU ASP GLU SEQRES 5 A 99 LEU MSE GLU ALA VAL LYS ALA ALA HIS GLU ALA VAL LEU SEQRES 6 A 99 GLN ALA GLY SER ASP ARG VAL TYR THR THR LEU LYS ILE SEQRES 7 A 99 ASP ASP ARG ARG ASP ALA ASP ARG GLY LEU ARG ASP LYS SEQRES 8 A 99 VAL GLU SER VAL LYS GLU LYS ILE SEQRES 1 B 99 MSE ILE THR ALA GLU LEU THR VAL ILE PRO LEU GLY THR SEQRES 2 B 99 CYS SER THR SER LEU SER SER TYR VAL ALA ALA ALA VAL SEQRES 3 B 99 GLU ALA LEU LYS LYS LEU ASN VAL ARG TYR GLU ILE SER SEQRES 4 B 99 GLY MSE GLY THR LEU LEU GLU ALA GLU ASP LEU ASP GLU SEQRES 5 B 99 LEU MSE GLU ALA VAL LYS ALA ALA HIS GLU ALA VAL LEU SEQRES 6 B 99 GLN ALA GLY SER ASP ARG VAL TYR THR THR LEU LYS ILE SEQRES 7 B 99 ASP ASP ARG ARG ASP ALA ASP ARG GLY LEU ARG ASP LYS SEQRES 8 B 99 VAL GLU SER VAL LYS GLU LYS ILE SEQRES 1 C 99 MSE ILE THR ALA GLU LEU THR VAL ILE PRO LEU GLY THR SEQRES 2 C 99 CYS SER THR SER LEU SER SER TYR VAL ALA ALA ALA VAL SEQRES 3 C 99 GLU ALA LEU LYS LYS LEU ASN VAL ARG TYR GLU ILE SER SEQRES 4 C 99 GLY MSE GLY THR LEU LEU GLU ALA GLU ASP LEU ASP GLU SEQRES 5 C 99 LEU MSE GLU ALA VAL LYS ALA ALA HIS GLU ALA VAL LEU SEQRES 6 C 99 GLN ALA GLY SER ASP ARG VAL TYR THR THR LEU LYS ILE SEQRES 7 C 99 ASP ASP ARG ARG ASP ALA ASP ARG GLY LEU ARG ASP LYS SEQRES 8 C 99 VAL GLU SER VAL LYS GLU LYS ILE SEQRES 1 D 99 MSE ILE THR ALA GLU LEU THR VAL ILE PRO LEU GLY THR SEQRES 2 D 99 CYS SER THR SER LEU SER SER TYR VAL ALA ALA ALA VAL SEQRES 3 D 99 GLU ALA LEU LYS LYS LEU ASN VAL ARG TYR GLU ILE SER SEQRES 4 D 99 GLY MSE GLY THR LEU LEU GLU ALA GLU ASP LEU ASP GLU SEQRES 5 D 99 LEU MSE GLU ALA VAL LYS ALA ALA HIS GLU ALA VAL LEU SEQRES 6 D 99 GLN ALA GLY SER ASP ARG VAL TYR THR THR LEU LYS ILE SEQRES 7 D 99 ASP ASP ARG ARG ASP ALA ASP ARG GLY LEU ARG ASP LYS SEQRES 8 D 99 VAL GLU SER VAL LYS GLU LYS ILE MODRES 1LXN MSE A 1 MET SELENOMETHIONINE MODRES 1LXN MSE A 41 MET SELENOMETHIONINE MODRES 1LXN MSE A 54 MET SELENOMETHIONINE MODRES 1LXN MSE B 1001 MET SELENOMETHIONINE MODRES 1LXN MSE B 1041 MET SELENOMETHIONINE MODRES 1LXN MSE B 1054 MET SELENOMETHIONINE MODRES 1LXN MSE C 2001 MET SELENOMETHIONINE MODRES 1LXN MSE C 2041 MET SELENOMETHIONINE MODRES 1LXN MSE C 2054 MET SELENOMETHIONINE MODRES 1LXN MSE D 3001 MET SELENOMETHIONINE MODRES 1LXN MSE D 3041 MET SELENOMETHIONINE MODRES 1LXN MSE D 3054 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 41 8 HET MSE A 54 8 HET MSE B1001 8 HET MSE B1041 8 HET MSE B1054 8 HET MSE C2001 8 HET MSE C2041 8 HET MSE C2054 8 HET MSE D3001 8 HET MSE D3041 8 HET MSE D3054 8 HET SO4 A 461 5 HET SO4 B 161 5 HET SO4 C 361 5 HET SO4 C 561 5 HET SO4 D 261 5 HET SO4 D 661 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 5 SO4 6(O4 S 2-) FORMUL 11 HOH *139(H2 O) HELIX 1 1 LEU A 18 LYS A 30 1 13 HELIX 2 2 ASP A 49 ALA A 67 1 19 HELIX 3 3 GLY A 87 ILE A 99 1 13 HELIX 4 4 LEU B 1018 LEU B 1032 1 15 HELIX 5 5 ASP B 1049 ALA B 1067 1 19 HELIX 6 6 GLY B 1087 ILE B 1099 1 13 HELIX 7 7 LEU C 2018 LYS C 2030 1 13 HELIX 8 8 ASP C 2049 ALA C 2067 1 19 HELIX 9 9 GLY C 2087 GLU C 2097 1 11 HELIX 10 10 LEU D 3018 LEU D 3032 1 15 HELIX 11 11 ASP D 3049 ALA D 3067 1 19 HELIX 12 12 GLY D 3087 ILE D 3099 1 13 SHEET 1 A 8 ARG A 35 SER A 39 0 SHEET 2 A 8 GLY A 42 ALA A 47 -1 O LEU A 44 N GLU A 37 SHEET 3 A 8 ILE A 2 PRO A 10 -1 N ILE A 2 O ALA A 47 SHEET 4 A 8 ARG A 71 ARG A 81 -1 O ASP A 79 N THR A 3 SHEET 5 A 8 ARG C2071 ARG C2081 -1 O ILE C2078 N THR A 74 SHEET 6 A 8 ILE C2002 PRO C2010 -1 N THR C2003 O ASP C2079 SHEET 7 A 8 GLY C2042 ALA C2047 -1 O LEU C2045 N ALA C2004 SHEET 8 A 8 VAL C2034 SER C2039 -1 N GLU C2037 O LEU C2044 SHEET 1 B 8 ARG B1035 SER B1039 0 SHEET 2 B 8 GLY B1042 ALA B1047 -1 O LEU B1044 N GLU B1037 SHEET 3 B 8 ILE B1002 PRO B1010 -1 N ALA B1004 O LEU B1045 SHEET 4 B 8 ARG B1071 ARG B1081 -1 O ASP B1079 N THR B1003 SHEET 5 B 8 ARG D3071 ARG D3081 -1 O ILE D3078 N THR B1074 SHEET 6 B 8 ILE D3002 PRO D3010 -1 N THR D3003 O ASP D3079 SHEET 7 B 8 GLY D3042 ALA D3047 -1 O LEU D3045 N ALA D3004 SHEET 8 B 8 ARG D3035 SER D3039 -1 N GLU D3037 O LEU D3044 SSBOND 1 CYS A 14 CYS D 3014 1555 1555 2.04 SSBOND 2 CYS B 1014 CYS C 2014 1555 1555 2.03 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C GLY A 40 N MSE A 41 1555 1555 1.33 LINK C MSE A 41 N GLY A 42 1555 1555 1.33 LINK C LEU A 53 N MSE A 54 1555 1555 1.33 LINK C MSE A 54 N GLU A 55 1555 1555 1.33 LINK C MSE B1001 N ILE B1002 1555 1555 1.33 LINK C GLY B1040 N MSE B1041 1555 1555 1.33 LINK C MSE B1041 N GLY B1042 1555 1555 1.33 LINK C LEU B1053 N MSE B1054 1555 1555 1.33 LINK C MSE B1054 N GLU B1055 1555 1555 1.33 LINK C MSE C2001 N ILE C2002 1555 1555 1.33 LINK C GLY C2040 N MSE C2041 1555 1555 1.33 LINK C MSE C2041 N GLY C2042 1555 1555 1.33 LINK C LEU C2053 N MSE C2054 1555 1555 1.33 LINK C MSE C2054 N GLU C2055 1555 1555 1.33 LINK C MSE D3001 N ILE D3002 1555 1555 1.33 LINK C GLY D3040 N MSE D3041 1555 1555 1.33 LINK C MSE D3041 N GLY D3042 1555 1555 1.33 LINK C LEU D3053 N MSE D3054 1555 1555 1.33 LINK C MSE D3054 N GLU D3055 1555 1555 1.33 SITE 1 AC1 7 ARG A 81 ARG A 86 SER A 94 SER B1017 SITE 2 AC1 7 LEU B1018 SER B1019 HOH C 11 SITE 1 AC2 7 ARG C2081 ARG C2086 SER C2094 HOH D 40 SITE 2 AC2 7 SER D3017 LEU D3018 SER D3019 SITE 1 AC3 8 HOH C 49 SER C2017 LEU C2018 SER C2019 SITE 2 AC3 8 ARG C2035 ARG D3081 ARG D3086 SER D3094 SITE 1 AC4 7 SER A 17 LEU A 18 SER A 19 HOH A 482 SITE 2 AC4 7 ARG B1081 ARG B1086 SER B1094 SITE 1 AC5 3 THR C2013 CYS C2014 TYR C2021 SITE 1 AC6 3 HOH D 92 CYS D3014 TYR D3021 CRYST1 175.365 175.365 175.365 90.00 90.00 90.00 P 41 3 2 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005702 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005702 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005702 0.00000 HETATM 1 N MSE A 1 137.148 55.851 2.601 1.00 38.98 N HETATM 2 CA MSE A 1 136.134 54.889 2.067 1.00 38.86 C HETATM 3 C MSE A 1 135.601 53.907 3.109 1.00 34.38 C HETATM 4 O MSE A 1 136.211 52.870 3.370 1.00 34.46 O HETATM 5 CB MSE A 1 136.718 54.095 0.898 1.00 45.08 C HETATM 6 CG MSE A 1 135.771 53.032 0.360 1.00 52.27 C HETATM 7 SE MSE A 1 134.013 53.760 -0.020 1.00 68.10 SE HETATM 8 CE MSE A 1 134.372 54.514 -1.774 1.00 61.83 C