HEADER VIRUS/DNA 12-JUN-02 1M06 TITLE STRUCTURAL STUDIES OF BACTERIOPHAGE ALPHA3 ASSEMBLY, X-RAY TITLE 2 CRYSTALLOGRAPHY CAVEAT 1M06 CHIRALITY ERROR AT C4' CENTER OF C X 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: F; COMPND 4 SYNONYM: F PROTEIN, GPF; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MAJOR SPIKE PROTEIN; COMPND 8 CHAIN: G; COMPND 9 SYNONYM: G PROTEIN, GPG; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: SMALL CORE PROTEIN; COMPND 13 CHAIN: J; COMPND 14 SYNONYM: J PROTEIN; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: 5'-D(P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR) COMPND 18 P*(3DR)P*(3DR)P*(3DR))-3'; COMPND 19 CHAIN: X; COMPND 20 ENGINEERED: YES; COMPND 21 OTHER_DETAILS: SSDNA FRAGMENT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE ALPHA3; SOURCE 3 ORGANISM_TAXID: 10849; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE ALPHA3; SOURCE 8 ORGANISM_TAXID: 10849; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE ALPHA3; SOURCE 11 ORGANISM_TAXID: 10849; SOURCE 12 MOL_ID: 4; SOURCE 13 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE ALPHA3; SOURCE 14 ORGANISM_TAXID: 10849 KEYWDS BACTERIOPHAGE, THREE-DIMENSIONAL STRUCTURE, VIRION, MORPHOGENESIS, KEYWDS 2 PHIX174, ASSEMBLY, MICROVIRIDAE, ICOSAHEDRAL VIRUS, VIRUS-DNA KEYWDS 3 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.A.BERNAL,S.HAFENSTEIN,N.H.OLSON,V.BOWMAN,P.R.CHIPMAN,T.S.BAKER, AUTHOR 2 B.A.FANE,M.G.ROSSMANN REVDAT 7 03-APR-24 1M06 1 REMARK REVDAT 6 19-APR-23 1M06 1 REMARK LINK CRYST1 MTRIX REVDAT 6 2 1 ATOM REVDAT 5 11-OCT-17 1M06 1 REMARK REVDAT 4 28-DEC-11 1M06 1 CAVEAT VERSN REVDAT 3 24-FEB-09 1M06 1 VERSN REVDAT 2 08-JAN-03 1M06 1 REMARK MTRIX1 MTRIX2 MTRIX3 REVDAT 1 25-DEC-02 1M06 0 JRNL AUTH R.A.BERNAL,S.HAFENSTEIN,N.H.OLSON,V.BOWMAN,P.R.CHIPMAN, JRNL AUTH 2 T.S.BAKER,B.A.FANE,M.G.ROSSMANN JRNL TITL STRUCTURAL STUDIES OF BACTERIOPHAGE ALPHA3 ASSEMBLY JRNL REF J.MOL.BIOL. V. 325 11 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12473449 JRNL DOI 10.1016/S0022-2836(02)01201-9 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 82.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 74.6 REMARK 3 NUMBER OF REFLECTIONS : 597050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 59662 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.001 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 55.20 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 49477 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 10.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 5469 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.004 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4983 REMARK 3 NUCLEIC ACID ATOMS : 110 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.70000 REMARK 3 B22 (A**2) : -5.06000 REMARK 3 B33 (A**2) : 4.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 26.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.45 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.17 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.250 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : GROUP REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.31 REMARK 3 BSOL : 10.00 REMARK 3 REMARK 3 NCS MODEL : CONSTR REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THIS BACTERIOPHAGE HAS A SINGLE STRANDED DNA GENOME OF 6087 REMARK 3 NUCLEOTIDES. IN THE ASYMMETRIC UNIT THE AUTHORS CAN SEE NON REMARK 3 PROTEIN DENSITY WHICH THEY HAVE REMARK 3 ATTRIBUTED TO THE SSDNA. THIS DENSITY IS WEAK AND THERE IS NO REMARK 3 DENSITY FOR THE BASE PORTION OF THE NUCLEOTIDES BECAUSE THE REMARK 3 SEQUENCE WILL BE DIFFERENT IN ALL REMARK 3 THE 60 SUBUNITS IN THE VIRUS. THE SUGAR-PHOSPHATE PORTION OF A REMARK 3 NUCLEOTIDE WAS BUILT IN WITH NO PARTICULAR SEQUENCE IN MIND AND IS REMARK 3 THUS NOT NECESSARILY A REMARK 3 10MER OF CYTS. THERE IS NO PARTICULAR CONNECTIVITY ASSOCIATED REMARK 3 WITH THE DNA. IT IS ALL JUST FRAGMENTS. THE NUMBERING OF THE REMARK 3 NUCLEOTIDES IS IRRELLEVANT REMARK 3 SINCE THEY ARE ALL IDENTICAL, HAVE NO BASES, AND THE AUTHORS CAN REMARK 3 SEE ONLY ABOUT 10% OF THE ENTIRE GENOME. ONLY NUCLEOTIDES 1, 2, 3, REMARK 3 AND 4 ARE LINKED, THE OTHERS ARE NOT LINKED. REMARK 4 REMARK 4 1M06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000016433. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-98 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-BM-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : EPICS REMARK 200 DATA SCALING SOFTWARE : SNP REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 597062 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 75.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 54.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.11500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 18.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: SNB, ENVELOPE REMARK 200 STARTING MODEL: PHIX174 VIRION REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3-5% PEG8000, 100 MM SODIUM CITRATE PH REMARK 280 5.0, 1 MM EDTA, 300 MM NACL, 0.1 MM-MERCAPTO-ETHANOL, AND 0.02 % REMARK 280 SODIUM AZIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 318.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 166.05750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G, J, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.480181 0.414874 -0.772856 65.21148 REMARK 350 BIOMT2 2 0.175378 0.817881 0.548008 -42.73516 REMARK 350 BIOMT3 2 0.859457 -0.398685 0.319971 33.49493 REMARK 350 BIOMT1 3 -0.360903 0.846659 -0.391049 52.90836 REMARK 350 BIOMT2 3 0.698642 0.523207 0.488011 -47.89524 REMARK 350 BIOMT3 3 0.617777 -0.097078 -0.780338 117.29672 REMARK 350 BIOMT1 4 -0.360903 0.698642 0.617777 -19.90686 REMARK 350 BIOMT2 4 0.846658 0.523207 -0.097079 -8.34919 REMARK 350 BIOMT3 4 -0.391048 0.488010 -0.780338 135.59414 REMARK 350 BIOMT1 5 0.480181 0.175378 0.859459 -52.60602 REMARK 350 BIOMT2 5 0.414874 0.817881 -0.398686 21.25170 REMARK 350 BIOMT3 5 -0.772855 0.548008 0.319971 63.10078 REMARK 350 BIOMT1 6 -0.999436 -0.033587 -0.000267 135.35701 REMARK 350 BIOMT2 6 -0.033586 0.999309 0.015891 0.94323 REMARK 350 BIOMT3 6 -0.000267 0.015891 -0.999874 167.40818 REMARK 350 BIOMT1 7 -0.486030 -0.442004 0.753928 71.60874 REMARK 350 BIOMT2 7 0.172788 0.797047 0.578672 -43.42035 REMARK 350 BIOMT3 7 -0.856690 0.411521 -0.311016 133.22096 REMARK 350 BIOMT1 8 0.337069 -0.863728 0.374645 84.05585 REMARK 350 BIOMT2 8 0.720098 0.492866 0.488407 -46.83194 REMARK 350 BIOMT3 8 -0.606500 0.105155 0.788099 49.35104 REMARK 350 BIOMT1 9 0.332367 -0.715951 -0.613960 155.49687 REMARK 350 BIOMT2 9 0.851981 0.507136 -0.130161 -4.57684 REMARK 350 BIOMT3 9 0.404549 -0.479820 0.778532 31.70380 REMARK 350 BIOMT1 10 -0.493639 -0.202896 -0.845668 187.20273 REMARK 350 BIOMT2 10 0.386178 0.820135 -0.422192 24.94984 REMARK 350 BIOMT3 10 0.779222 -0.534988 -0.326496 104.66712 REMARK 350 BIOMT1 11 0.896847 0.028357 0.441430 -32.75551 REMARK 350 BIOMT2 11 0.028356 -0.999576 0.006599 163.58584 REMARK 350 BIOMT3 11 0.441430 0.006599 -0.897271 130.24333 REMARK 350 BIOMT1 12 0.815013 0.219280 -0.536349 39.30307 REMARK 350 BIOMT2 12 -0.156016 -0.808401 -0.567580 208.37308 REMARK 350 BIOMT3 12 -0.558043 0.546264 -0.624646 128.69356 REMARK 350 BIOMT1 13 -0.031158 0.731307 -0.681337 65.11539 REMARK 350 BIOMT2 13 -0.704503 -0.499617 -0.504042 213.73511 REMARK 350 BIOMT3 13 -0.709016 0.464299 0.530775 48.03560 REMARK 350 BIOMT1 14 -0.472286 0.856835 0.206834 9.00969 REMARK 350 BIOMT2 14 -0.859114 -0.499953 0.109406 172.26180 REMARK 350 BIOMT3 14 0.197150 -0.126023 0.972240 -0.26398 REMARK 350 BIOMT1 15 0.101253 0.422388 0.900743 -51.47784 REMARK 350 BIOMT2 15 -0.406182 -0.808945 0.424999 141.26784 REMARK 350 BIOMT3 15 0.908165 -0.408897 0.089658 50.54319 REMARK 350 BIOMT1 16 -0.897412 0.005230 -0.441163 162.56489 REMARK 350 BIOMT2 16 0.005230 -0.999733 -0.022490 167.58597 REMARK 350 BIOMT3 16 -0.441163 -0.022490 0.897145 39.78961 REMARK 350 BIOMT1 17 -0.809164 -0.192150 0.555276 89.04311 REMARK 350 BIOMT2 17 -0.192150 -0.806527 -0.559101 209.89748 REMARK 350 BIOMT3 17 0.555275 -0.559100 0.615691 42.03167 REMARK 350 BIOMT1 18 0.054992 -0.714237 0.697740 63.08680 REMARK 350 BIOMT2 18 -0.714237 -0.516456 -0.472376 213.10711 REMARK 350 BIOMT3 18 0.697739 -0.472375 -0.538536 122.75776 REMARK 350 BIOMT1 19 0.500822 -0.839525 -0.210652 120.56670 REMARK 350 BIOMT2 19 -0.839525 -0.530389 0.117834 172.77928 REMARK 350 BIOMT3 19 -0.210652 0.117834 -0.970433 170.40717 REMARK 350 BIOMT1 20 -0.087795 -0.394870 -0.914533 182.04754 REMARK 350 BIOMT2 20 -0.394870 -0.829071 0.395878 144.64566 REMARK 350 BIOMT3 20 -0.914532 0.395878 -0.083134 119.13003 REMARK 350 BIOMT1 21 0.200403 0.237443 -0.950506 113.47691 REMARK 350 BIOMT2 21 0.976805 0.026269 0.212510 -1.83372 REMARK 350 BIOMT3 21 0.075427 -0.971046 -0.226671 179.10690 REMARK 350 BIOMT1 22 -0.679047 0.656294 -0.328896 84.56119 REMARK 350 BIOMT2 22 0.656294 0.342011 -0.672537 67.86064 REMARK 350 BIOMT3 22 -0.328896 -0.672537 -0.662964 217.93107 REMARK 350 BIOMT1 23 -0.493638 0.386178 0.779223 1.21633 REMARK 350 BIOMT2 23 -0.202895 0.820134 -0.534989 73.51609 REMARK 350 BIOMT3 23 -0.845668 -0.422192 -0.326496 203.01831 REMARK 350 BIOMT1 24 0.500400 -0.199615 0.842469 -21.37791 REMARK 350 BIOMT2 24 -0.413393 0.799889 0.435068 7.31700 REMARK 350 BIOMT3 24 -0.760727 -0.565979 0.317745 154.97755 REMARK 350 BIOMT1 25 0.929341 -0.291538 -0.226562 48.00294 REMARK 350 BIOMT2 25 0.315702 0.309252 0.897048 -39.25174 REMARK 350 BIOMT3 25 -0.191459 -0.905189 0.379440 140.19948 REMARK 350 BIOMT1 26 -0.208011 0.215443 0.954105 -18.29562 REMARK 350 BIOMT2 26 -0.977193 -0.003181 -0.212327 165.98451 REMARK 350 BIOMT3 26 -0.042710 -0.976511 0.211191 150.45393 REMARK 350 BIOMT1 27 0.757914 -0.290479 0.584113 -9.10962 REMARK 350 BIOMT2 27 -0.652274 -0.323362 0.685548 95.28434 REMARK 350 BIOMT3 27 -0.010258 -0.900588 -0.434552 196.47392 REMARK 350 BIOMT1 28 0.815013 -0.156016 -0.558044 72.29358 REMARK 350 BIOMT2 28 0.219279 -0.808401 0.546265 89.52990 REMARK 350 BIOMT3 28 -0.536348 -0.567580 -0.624646 219.73648 REMARK 350 BIOMT1 29 -0.115622 0.433009 -0.893944 113.41752 REMARK 350 BIOMT2 29 0.433009 -0.787990 -0.437692 156.67363 REMARK 350 BIOMT3 29 -0.893943 -0.437693 -0.096387 188.09353 REMARK 350 BIOMT1 30 -0.747886 0.662583 0.040616 57.43032 REMARK 350 BIOMT2 30 -0.306452 -0.290337 -0.906528 203.92517 REMARK 350 BIOMT3 30 -0.588858 -0.690426 0.420189 145.27456 REMARK 350 BIOMT1 31 -0.233118 -0.237932 0.942892 21.95790 REMARK 350 BIOMT2 31 0.970599 0.002844 0.240685 -1.85425 REMARK 350 BIOMT3 31 -0.059948 0.971277 0.230273 -11.73553 REMARK 350 BIOMT1 32 0.656709 -0.667232 0.351476 48.50611 REMARK 350 BIOMT2 32 0.673421 0.309045 -0.671562 69.38012 REMARK 350 BIOMT3 32 0.339465 0.677712 0.652281 -49.43955 REMARK 350 BIOMT1 33 0.500400 -0.413393 -0.760727 131.61798 REMARK 350 BIOMT2 33 -0.199615 0.799889 -0.565979 77.59392 REMARK 350 BIOMT3 33 0.842468 0.435068 0.317745 -34.41655 REMARK 350 BIOMT1 34 -0.486030 0.172787 -0.856691 156.43573 REMARK 350 BIOMT2 34 -0.442003 0.797046 0.411522 11.43597 REMARK 350 BIOMT3 34 0.753928 0.578672 -0.311016 12.57219 REMARK 350 BIOMT1 35 -0.939369 0.281228 0.196203 88.66208 REMARK 350 BIOMT2 35 0.281229 0.304446 0.910068 -37.66570 REMARK 350 BIOMT3 35 0.196204 0.910067 -0.365077 26.58983 REMARK 350 BIOMT1 36 0.240726 -0.214954 -0.946492 148.02720 REMARK 350 BIOMT2 36 -0.970211 -0.025932 -0.240869 169.81850 REMARK 350 BIOMT3 36 0.027231 0.976279 -0.214793 19.61583 REMARK 350 BIOMT1 37 -0.735576 0.301416 -0.606693 141.20871 REMARK 350 BIOMT2 37 -0.677442 -0.327694 0.658551 99.58995 REMARK 350 BIOMT3 37 -0.000311 0.895413 0.445236 -27.52432 REMARK 350 BIOMT1 38 -0.821775 0.183231 0.539548 60.03851 REMARK 350 BIOMT2 38 0.183231 -0.811622 0.554703 91.47513 REMARK 350 BIOMT3 38 0.539548 0.554703 0.633397 -50.89711 REMARK 350 BIOMT1 39 0.101252 -0.406182 0.908166 16.69106 REMARK 350 BIOMT2 39 0.422387 -0.808945 -0.408898 156.68845 REMARK 350 BIOMT3 39 0.900742 0.425000 0.089659 -18.20214 REMARK 350 BIOMT1 40 0.757914 -0.652274 -0.010257 71.07106 REMARK 350 BIOMT2 40 -0.290479 -0.323362 -0.900589 205.10731 REMARK 350 BIOMT3 40 0.584113 0.685548 -0.434552 25.37725 REMARK 350 BIOMT1 41 0.200403 0.976806 0.075427 -34.45951 REMARK 350 BIOMT2 41 0.237443 0.026268 -0.971047 147.02506 REMARK 350 BIOMT3 41 -0.950504 0.212510 -0.226671 148.84835 REMARK 350 BIOMT1 42 0.332367 0.851981 0.404550 -60.60846 REMARK 350 BIOMT2 42 -0.715951 0.507135 -0.479821 128.86133 REMARK 350 BIOMT3 42 -0.613959 -0.130161 0.778532 70.19059 REMARK 350 BIOMT1 43 0.656709 0.673422 0.339465 -61.79348 REMARK 350 BIOMT2 43 -0.667231 0.309044 0.677712 44.42906 REMARK 350 BIOMT3 43 0.351476 -0.671561 0.652280 61.79273 REMARK 350 BIOMT1 44 0.725199 0.687891 -0.029882 -36.37693 REMARK 350 BIOMT2 44 0.316272 -0.294249 0.901881 10.41077 REMARK 350 BIOMT3 44 0.611602 -0.663494 -0.430950 135.26034 REMARK 350 BIOMT1 45 0.443187 0.875392 -0.193066 -19.48360 REMARK 350 BIOMT2 45 0.875392 -0.469015 -0.117108 73.81858 REMARK 350 BIOMT3 45 -0.193066 -0.117108 -0.974172 189.06367 REMARK 350 BIOMT1 46 -0.233117 0.970599 -0.059949 6.21497 REMARK 350 BIOMT2 46 -0.237932 0.002844 0.971278 16.62822 REMARK 350 BIOMT3 46 0.942891 0.240686 0.230273 -17.55524 REMARK 350 BIOMT1 47 0.006760 0.721021 0.692881 -52.47365 REMARK 350 BIOMT2 47 0.721020 -0.483620 0.496227 33.52369 REMARK 350 BIOMT3 47 0.692880 0.496227 -0.523140 41.35933 REMARK 350 BIOMT1 48 0.725199 0.316273 0.611603 -59.63776 REMARK 350 BIOMT2 48 0.687890 -0.294249 -0.663494 117.83115 REMARK 350 BIOMT3 48 -0.029881 0.901881 -0.430950 47.81420 REMARK 350 BIOMT1 49 0.929342 0.315703 -0.191459 -5.37682 REMARK 350 BIOMT2 49 -0.291538 0.309252 -0.905190 153.04056 REMARK 350 BIOMT3 49 -0.226561 0.897048 0.379440 -7.11105 REMARK 350 BIOMT1 50 0.337069 0.720099 -0.606501 35.32241 REMARK 350 BIOMT2 50 -0.863727 0.492866 0.105155 90.49370 REMARK 350 BIOMT3 50 0.374645 0.488407 0.788099 -47.51159 REMARK 350 BIOMT1 51 0.240726 -0.970211 0.027231 128.59174 REMARK 350 BIOMT2 51 -0.214954 -0.025932 0.976280 17.07225 REMARK 350 BIOMT3 51 -0.946491 -0.240869 -0.214794 185.22378 REMARK 350 BIOMT1 52 -0.031158 -0.704503 -0.709017 186.66405 REMARK 350 BIOMT2 52 0.731306 -0.499617 0.464299 36.86341 REMARK 350 BIOMT3 52 -0.681337 -0.504042 0.530775 126.60081 REMARK 350 BIOMT1 53 -0.747886 -0.306452 -0.588858 190.99076 REMARK 350 BIOMT2 53 0.662583 -0.290336 -0.690426 121.45585 REMARK 350 BIOMT3 53 0.040615 -0.906527 0.420189 121.48841 REMARK 350 BIOMT1 54 -0.918965 -0.326151 0.221652 135.59250 REMARK 350 BIOMT2 54 -0.326150 0.312691 -0.892105 153.94569 REMARK 350 BIOMT3 54 0.221652 -0.892104 -0.393726 176.95176 REMARK 350 BIOMT1 55 -0.307969 -0.736377 0.602416 97.02779 REMARK 350 BIOMT2 55 -0.868498 0.476101 0.137976 89.43308 REMARK 350 BIOMT3 55 -0.388413 -0.480705 -0.786166 216.34238 REMARK 350 BIOMT1 56 -0.208011 -0.977194 -0.042710 164.81920 REMARK 350 BIOMT2 56 0.215443 -0.003180 -0.976512 151.38951 REMARK 350 BIOMT3 56 0.954104 -0.212326 0.211191 20.92422 REMARK 350 BIOMT1 57 -0.307969 -0.868499 -0.388414 191.58446 REMARK 350 BIOMT2 57 -0.736376 0.476101 -0.480705 132.86660 REMARK 350 BIOMT3 57 0.602416 0.137976 -0.786166 99.29039 REMARK 350 BIOMT1 58 -0.634022 -0.683243 -0.362210 195.60689 REMARK 350 BIOMT2 58 -0.683242 0.275541 0.676208 48.39898 REMARK 350 BIOMT3 58 -0.362210 0.676208 -0.641519 106.34578 REMARK 350 BIOMT1 59 -0.735576 -0.677442 -0.000312 171.32764 REMARK 350 BIOMT2 59 0.301416 -0.327693 0.895414 14.71803 REMARK 350 BIOMT3 59 -0.606692 0.658550 0.445236 32.34008 REMARK 350 BIOMT1 60 -0.472287 -0.859114 0.197150 152.29980 REMARK 350 BIOMT2 60 0.856834 -0.499953 -0.126023 78.36968 REMARK 350 BIOMT3 60 0.206834 0.109406 0.972240 -20.45335 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F 1 REMARK 465 SER F 2 REMARK 465 ASN F 3 REMARK 465 VAL F 4 REMARK 465 GLN F 5 REMARK 465 THR F 6 REMARK 465 SER F 7 REMARK 465 ALA F 8 REMARK 465 GLU F 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP F 242 OP2 3DR X 8 1.01 REMARK 500 NZ LYS F 167 OP2 3DR X 2 1.53 REMARK 500 O ASP F 242 P 3DR X 8 1.65 REMARK 500 OD1 ASP F 242 OP1 3DR X 8 1.68 REMARK 500 O5' 3DR X 8 C3' 3DR X 10 1.68 REMARK 500 CB ALA G 46 CE MET G 68 1.78 REMARK 500 C ASP F 242 OP2 3DR X 8 1.87 REMARK 500 OD1 ASP F 242 P 3DR X 8 1.90 REMARK 500 OP1 3DR X 8 O5' 3DR X 10 1.91 REMARK 500 P 3DR X 8 C3' 3DR X 10 1.95 REMARK 500 OD1 ASP F 242 C2' 3DR X 10 2.01 REMARK 500 OP2 3DR X 8 C3' 3DR X 10 2.10 REMARK 500 O THR G 42 N GLU G 44 2.11 REMARK 500 OP1 3DR X 8 C3' 3DR X 10 2.17 REMARK 500 OP1 3DR X 8 C5' 3DR X 10 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 3DR X 2 O3' 3DR X 3 P 0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO G 34 C - N - CD ANGL. DEV. = -15.2 DEGREES REMARK 500 3DR X 1 C3' - O3' - P ANGL. DEV. = -17.6 DEGREES REMARK 500 3DR X 2 O3' - P - O5' ANGL. DEV. = -17.2 DEGREES REMARK 500 3DR X 2 O3' - P - OP1 ANGL. DEV. = 18.0 DEGREES REMARK 500 3DR X 3 O3' - P - O5' ANGL. DEV. = -16.3 DEGREES REMARK 500 3DR X 3 O3' - P - OP2 ANGL. DEV. = 62.2 DEGREES REMARK 500 3DR X 3 O3' - P - OP1 ANGL. DEV. = -34.5 DEGREES REMARK 500 3DR X 3 C3' - O3' - P ANGL. DEV. = -8.7 DEGREES REMARK 500 3DR X 4 O3' - P - O5' ANGL. DEV. = 11.8 DEGREES REMARK 500 3DR X 4 O3' - P - OP1 ANGL. DEV. = -13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU F 25 -93.39 -55.52 REMARK 500 SER F 32 131.00 -175.65 REMARK 500 ARG F 57 -163.76 -119.31 REMARK 500 VAL F 90 11.52 -66.10 REMARK 500 HIS F 106 27.99 -61.98 REMARK 500 VAL F 110 30.81 -97.84 REMARK 500 TYR F 135 -27.67 -145.13 REMARK 500 GLU F 154 -71.12 -26.88 REMARK 500 ALA F 181 142.49 -171.39 REMARK 500 SER F 188 -39.34 -36.54 REMARK 500 PHE F 212 -2.65 -144.91 REMARK 500 MET F 213 57.62 -115.64 REMARK 500 ARG F 275 117.12 -34.94 REMARK 500 PRO F 294 67.18 -66.18 REMARK 500 PHE F 361 -14.28 -49.13 REMARK 500 PRO F 370 37.61 -78.67 REMARK 500 ASP F 382 62.56 -65.33 REMARK 500 ASP F 394 -17.12 -49.58 REMARK 500 SER F 401 123.56 179.89 REMARK 500 LEU F 405 -156.28 51.09 REMARK 500 ILE G 36 53.24 -59.92 REMARK 500 ILE G 41 -177.63 -63.87 REMARK 500 THR G 42 -3.03 -168.30 REMARK 500 ALA G 43 14.49 -58.18 REMARK 500 TYR G 51 68.17 -157.53 REMARK 500 THR G 58 -98.46 -75.37 REMARK 500 SER G 93 -4.37 -143.90 REMARK 500 TYR G 94 70.85 52.12 REMARK 500 PRO G 95 172.61 -58.68 REMARK 500 SER G 147 117.00 -35.41 REMARK 500 ILE G 177 11.84 -140.61 REMARK 500 PRO G 185 -29.20 -38.75 REMARK 500 PRO J 8 166.84 -42.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 3 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 5 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 6 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 7 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 8 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 9 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 3DR X 10 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2BPA RELATED DB: PDB REMARK 900 ATOMIC STRUCTURE OF THE SINGLE-STRANDED BACTERIOPHAGE PHIX174 REMARK 900 RELATED ID: 1CD3 RELATED DB: PDB REMARK 900 PROCAPSID OF THE BACTERIOPHAGE PHIX174 REMARK 900 RELATED ID: 1GFF RELATED DB: PDB REMARK 900 ATOMIC STRUCTURE OF THE DEGRADED PROCAPSID PARTICLE OF THE REMARK 900 BACTERIOPHAGE G4. REMARK 900 RELATED ID: 1PHX RELATED DB: PDB REMARK 900 DNA PACKAGING INTERMEDIATES OF THE BACTERIOPHAGE PHIX174 REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE 160 OF THE F PROTEIN IS AN ARG ACCORDING REMARK 999 TO THE REPORTED SEQUENCE BUT NO DENSITY IS SEEN REMARK 999 FOR THE SIDE CHAIN IN THE CRYSTAL STRUCTURE FOR REMARK 999 THIS RESIDUE. AFTER A STRUCTURAL SEQUENCE REMARK 999 ALIGNMENT WITH HOMOLOGOUS BACTERIOPHAGES PHIX174 REMARK 999 AND G4, RESIDUE 160 WAS FOUND TO BE A GLYCINE REMARK 999 IN THE OTHER PHAGES. CONSEQUENTLY, THE AUTHORS REMARK 999 STATE RESIDUE 160 SHOULD BE A GLYCINE. DBREF 1M06 F 1 431 UNP P08767 VGF_BPAL3 1 431 DBREF 1M06 G 1 187 UNP P31281 VGG_BPAL3 1 187 DBREF 1M06 J 1 24 UNP P08766 VGJ_BPAL3 1 24 DBREF 1M06 X 1 10 PDB 1M06 1M06 1 10 SEQADV 1M06 GLY F 160 UNP P08767 ARG 160 SEE REMARK 999 SEQRES 1 F 431 MET SER ASN VAL GLN THR SER ALA GLU ARG GLU ILE VAL SEQRES 2 F 431 ASP LEU SER HIS LEU ALA PHE ASP CYS GLY MET LEU GLY SEQRES 3 F 431 ARG LEU LYS THR VAL SER TRP THR PRO VAL ILE ALA GLY SEQRES 4 F 431 ASP SER PHE GLU LEU ASP ALA VAL GLY ALA LEU ARG LEU SEQRES 5 F 431 SER PRO LEU ARG ARG GLY LEU ALA ILE ASP SER LYS VAL SEQRES 6 F 431 ASP PHE PHE THR PHE TYR ILE PRO HIS ARG HIS VAL TYR SEQRES 7 F 431 GLY ASP GLN TRP ILE GLN PHE MET ARG ASP GLY VAL ASN SEQRES 8 F 431 ALA GLN PRO LEU PRO SER VAL THR CYS ASN ARG TYR PRO SEQRES 9 F 431 ASP HIS ALA GLY TYR VAL GLY THR ILE VAL PRO ALA ASN SEQRES 10 F 431 ASN ARG ILE PRO LYS PHE LEU HIS GLN SER TYR LEU ASN SEQRES 11 F 431 ILE TYR ASN ASN TYR PHE ARG ALA PRO TRP MET PRO GLU SEQRES 12 F 431 ARG THR GLU ALA ASN PRO SER ASN LEU ASN GLU ASP ASP SEQRES 13 F 431 ALA ARG TYR GLY PHE ARG CYS CYS HIS LEU LYS ASN ILE SEQRES 14 F 431 TRP SER ALA PRO LEU PRO PRO GLU THR LYS LEU ALA GLU SEQRES 15 F 431 GLU MET GLY ILE GLU SER ASN SER ILE ASP ILE MET GLY SEQRES 16 F 431 LEU GLN ALA ALA TYR ALA GLN LEU HIS THR GLU GLN GLU SEQRES 17 F 431 ARG THR TYR PHE MET GLN ARG TYR ARG ASP VAL ILE SER SEQRES 18 F 431 SER PHE GLY GLY SER THR SER TYR ASP ALA ASP ASN ARG SEQRES 19 F 431 PRO LEU LEU VAL MET HIS THR ASP PHE TRP ALA SER GLY SEQRES 20 F 431 TYR ASP VAL ASP GLY THR ASP GLN SER SER LEU GLY GLN SEQRES 21 F 431 PHE SER GLY ARG VAL GLN GLN THR PHE LYS HIS SER VAL SEQRES 22 F 431 PRO ARG PHE PHE VAL PRO GLU HIS GLY VAL MET MET THR SEQRES 23 F 431 LEU ALA LEU ILE ARG PHE PRO PRO ILE SER PRO LEU GLU SEQRES 24 F 431 HIS HIS TYR LEU ALA GLY LYS SER GLN LEU THR TYR THR SEQRES 25 F 431 ASP LEU ALA GLY ASP PRO ALA LEU ILE GLY ASN LEU PRO SEQRES 26 F 431 PRO ARG GLU ILE SER TYR ARG ASP LEU PHE ARG ASP GLY SEQRES 27 F 431 ARG SER GLY ILE LYS ILE LYS VAL ALA GLU SER ILE TRP SEQRES 28 F 431 TYR ARG THR HIS PRO ASP TYR VAL ASN PHE LYS TYR HIS SEQRES 29 F 431 ASP LEU HIS GLY PHE PRO PHE LEU ASP ASP ALA PRO GLY SEQRES 30 F 431 THR SER THR GLY ASP ASN LEU GLN GLU ALA ILE LEU VAL SEQRES 31 F 431 ARG HIS GLN ASP TYR ASP ALA CYS PHE GLN SER GLN GLN SEQRES 32 F 431 LEU LEU GLN TRP ASN LYS GLN ALA ARG TYR ASN VAL SER SEQRES 33 F 431 VAL TYR ARG HIS MET PRO THR VAL ARG ASP SER ILE MET SEQRES 34 F 431 THR SER SEQRES 1 G 187 MET TYR GLN ASN PHE VAL THR LYS HIS ASP THR ALA ILE SEQRES 2 G 187 GLN THR SER ARG PHE SER VAL THR GLY ASN VAL ILE PRO SEQRES 3 G 187 ALA ALA PRO THR GLY ASN ILE PRO VAL ILE ASN GLY GLY SEQRES 4 G 187 SER ILE THR ALA GLU ARG ALA VAL VAL ASN LEU TYR ALA SEQRES 5 G 187 ASN MET ASN VAL SER THR SER SER ASP GLY SER PHE ILE SEQRES 6 G 187 VAL ALA MET LYS VAL ASP THR SER PRO THR ASP PRO ASN SEQRES 7 G 187 CYS VAL ILE SER ALA GLY VAL ASN LEU SER PHE ALA GLY SEQRES 8 G 187 THR SER TYR PRO ILE VAL GLY ILE VAL ARG PHE GLU SER SEQRES 9 G 187 ALA SER GLU GLN PRO THR SER ILE ALA GLY SER GLU VAL SEQRES 10 G 187 GLU HIS TYR PRO ILE GLU MET SER VAL GLY SER GLY GLY SEQRES 11 G 187 VAL CYS SER ALA ARG ASP CYS ALA THR VAL ASP ILE HIS SEQRES 12 G 187 PRO ARG THR SER GLY ASN ASN VAL PHE VAL GLY VAL ILE SEQRES 13 G 187 CYS SER SER ALA LYS TRP THR SER GLY ARG VAL ILE GLY SEQRES 14 G 187 THR ILE ALA THR THR GLN VAL ILE HIS GLU TYR GLN VAL SEQRES 15 G 187 LEU GLN PRO LEU LYS SEQRES 1 J 24 MET LYS LYS ALA ARG ARG SER PRO SER ARG ARG LYS GLY SEQRES 2 J 24 ALA ARG LEU TRP TYR VAL GLY GLY SER GLN PHE SEQRES 1 X 10 3DR 3DR 3DR 3DR 3DR 3DR 3DR 3DR 3DR 3DR HET 3DR X 1 11 HET 3DR X 2 11 HET 3DR X 3 11 HET 3DR X 4 11 HET 3DR X 5 11 HET 3DR X 6 11 HET 3DR X 7 11 HET 3DR X 8 11 HET 3DR X 9 11 HET 3DR X 10 11 HETNAM 3DR 1',2'-DIDEOXYRIBOFURANOSE-5'-PHOSPHATE HETSYN 3DR ABASIC DIDEOXYRIBOSE FORMUL 4 3DR 10(C5 H11 O6 P) HELIX 1 1 HIS F 74 GLY F 79 1 6 HELIX 2 2 GLY F 79 GLY F 89 1 11 HELIX 3 3 VAL F 90 ALA F 92 5 3 HELIX 4 4 ALA F 107 GLY F 111 5 5 HELIX 5 5 LYS F 122 PHE F 136 1 15 HELIX 6 6 ASN F 148 LEU F 152 5 5 HELIX 7 7 ASN F 153 GLY F 160 1 8 HELIX 8 8 ASP F 192 MET F 213 1 22 HELIX 9 9 ARG F 215 PHE F 223 1 9 HELIX 10 10 HIS F 301 LYS F 306 1 6 HELIX 11 11 THR F 310 ALA F 315 1 6 HELIX 12 12 ASP F 317 GLY F 322 1 6 HELIX 13 13 SER F 349 ARG F 353 5 5 HELIX 14 14 ASN F 360 LEU F 366 5 7 HELIX 15 15 ASN F 383 LEU F 389 1 7 HELIX 16 16 ARG F 391 PHE F 399 5 9 HELIX 17 17 THR F 423 MET F 429 1 7 HELIX 18 18 SER G 115 VAL G 117 5 3 HELIX 19 19 LYS J 2 ARG J 6 5 5 SHEET 1 A 5 GLY F 247 ASP F 251 0 SHEET 2 A 5 PHE F 261 PHE F 277 -1 O ARG F 264 N TYR F 248 SHEET 3 A 5 SER F 41 LEU F 52 -1 N LEU F 44 O VAL F 273 SHEET 4 A 5 TRP F 407 ARG F 419 -1 O ARG F 412 N VAL F 47 SHEET 5 A 5 GLU F 11 ASP F 14 -1 N GLU F 11 O ARG F 419 SHEET 1 B 5 GLY F 247 ASP F 251 0 SHEET 2 B 5 PHE F 261 PHE F 277 -1 O ARG F 264 N TYR F 248 SHEET 3 B 5 SER F 41 LEU F 52 -1 N LEU F 44 O VAL F 273 SHEET 4 B 5 TRP F 407 ARG F 419 -1 O ARG F 412 N VAL F 47 SHEET 5 B 5 HIS F 17 GLY F 23 -1 N HIS F 17 O TYR F 413 SHEET 1 C 5 PHE F 161 ARG F 162 0 SHEET 2 C 5 ARG F 27 VAL F 36 -1 N LEU F 28 O PHE F 161 SHEET 3 C 5 GLY F 282 ARG F 291 -1 O GLY F 282 N VAL F 36 SHEET 4 C 5 SER F 63 PRO F 73 -1 N LYS F 64 O ARG F 291 SHEET 5 C 5 LEU F 236 ALA F 245 -1 O PHE F 243 N VAL F 65 SHEET 1 D 2 SER F 97 THR F 99 0 SHEET 2 D 2 ARG F 119 PRO F 121 -1 O ILE F 120 N VAL F 98 SHEET 1 E 2 ARG F 327 SER F 330 0 SHEET 2 E 2 LYS F 343 VAL F 346 -1 O ILE F 344 N ILE F 329 SHEET 1 F 6 ARG G 17 VAL G 24 0 SHEET 2 F 6 ARG G 45 MET G 54 1 O ASN G 49 N VAL G 20 SHEET 3 F 6 GLY G 165 GLN G 175 -1 O GLY G 165 N MET G 54 SHEET 4 F 6 ASN G 78 PHE G 89 -1 N SER G 82 O THR G 174 SHEET 5 F 6 VAL G 131 ASP G 141 -1 O ALA G 134 N VAL G 85 SHEET 6 F 6 VAL G 126 GLY G 127 -1 N VAL G 126 O SER G 133 SHEET 1 G 2 ASN G 32 PRO G 34 0 SHEET 2 G 2 SER G 111 ALA G 113 -1 O ILE G 112 N ILE G 33 SHEET 1 H 4 GLY G 62 LYS G 69 0 SHEET 2 H 4 ASN G 150 SER G 159 -1 O VAL G 153 N MET G 68 SHEET 3 H 4 ILE G 96 SER G 104 -1 N VAL G 100 O GLY G 154 SHEET 4 H 4 GLU G 118 TYR G 120 -1 O GLU G 118 N ARG G 101 LINK O3' 3DR X 1 P 3DR X 2 1555 1555 1.67 LINK O3' 3DR X 3 P 3DR X 4 1555 1555 1.54 SITE 1 AC1 7 PHE F 212 ASP F 218 ARG J 15 SER J 22 SITE 2 AC1 7 3DR X 2 3DR X 3 3DR X 7 SITE 1 AC2 5 LYS F 167 GLN J 23 PHE J 24 3DR X 1 SITE 2 AC2 5 3DR X 3 SITE 1 AC3 6 LYS F 167 LEU J 16 TRP J 17 3DR X 1 SITE 2 AC3 6 3DR X 2 3DR X 4 SITE 1 AC4 6 ARG J 11 GLY J 13 ALA J 14 LEU J 16 SITE 2 AC4 6 TRP J 17 3DR X 3 SITE 1 AC5 4 ARG F 217 SER F 221 ARG F 234 SER J 22 SITE 1 AC6 4 GLU F 208 PHE F 212 SER F 222 3DR X 7 SITE 1 AC7 5 PHE F 212 ARG J 15 TYR J 18 3DR X 1 SITE 2 AC7 5 3DR X 6 SITE 1 AC8 5 THR F 241 ASP F 242 PHE F 243 3DR X 9 SITE 2 AC8 5 3DR X 10 SITE 1 AC9 5 ASP F 242 PHE F 243 TRP F 244 3DR X 8 SITE 2 AC9 5 3DR X 10 SITE 1 BC1 5 HIS F 240 THR F 241 ASP F 242 3DR X 8 SITE 2 BC1 5 3DR X 9 CRYST1 290.258 332.115 337.698 90.00 94.08 90.00 P 1 21 1 120 ORIGX1 -0.973870 -0.014559 -0.226637 84.88738 ORIGX2 0.226482 0.011546 -0.973947 66.18993 ORIGX3 0.016796 -0.999827 -0.007947 82.57138 SCALE1 0.003445 0.000000 0.000246 0.00000 SCALE2 0.000000 0.003011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002969 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.480181 0.414874 -0.772856 65.21148 MTRIX2 2 0.175378 0.817881 0.548008 -42.73516 MTRIX3 2 0.859457 -0.398685 0.319971 33.49493 MTRIX1 3 -0.360903 0.846659 -0.391048 52.90836 MTRIX2 3 0.698642 0.523207 0.488011 -47.89524 MTRIX3 3 0.617777 -0.097078 -0.780338 117.29672 MTRIX1 4 -0.360903 0.698642 0.617777 -19.90686 MTRIX2 4 0.846658 0.523207 -0.097079 -8.34919 MTRIX3 4 -0.391048 0.488010 -0.780338 135.59414 MTRIX1 5 0.480181 0.175378 0.859459 -52.60602 MTRIX2 5 0.414874 0.817881 -0.398686 21.25170 MTRIX3 5 -0.772855 0.548008 0.319971 63.10078 MTRIX1 6 -0.999436 -0.033587 -0.000267 135.35701 MTRIX2 6 -0.033586 0.999309 0.015891 0.94323 MTRIX3 6 -0.000267 0.015891 -0.999874 167.40818 MTRIX1 7 -0.486030 -0.442004 0.753928 71.60874 MTRIX2 7 0.172788 0.797047 0.578672 -43.42035 MTRIX3 7 -0.856690 0.411521 -0.311016 133.22096 MTRIX1 8 0.337069 -0.863728 0.374645 84.05585 MTRIX2 8 0.720098 0.492867 0.488407 -46.83194 MTRIX3 8 -0.606500 0.105155 0.788099 49.35104 MTRIX1 9 0.332367 -0.715951 -0.613960 155.49687 MTRIX2 9 0.851981 0.507136 -0.130161 -4.57684 MTRIX3 9 0.404549 -0.479820 0.778532 31.70380 MTRIX1 10 -0.493639 -0.202896 -0.845668 187.20273 MTRIX2 10 0.386178 0.820135 -0.422192 24.94984 MTRIX3 10 0.779222 -0.534988 -0.326496 104.66712 MTRIX1 11 0.896847 0.028357 0.441430 -32.75551 MTRIX2 11 0.028356 -0.999576 0.006599 163.58584 MTRIX3 11 0.441430 0.006599 -0.897271 130.24333 MTRIX1 12 0.815013 0.219280 -0.536349 39.30307 MTRIX2 12 -0.156016 -0.808401 -0.567580 208.37308 MTRIX3 12 -0.558043 0.546264 -0.624646 128.69356 MTRIX1 13 -0.031158 0.731307 -0.681337 65.11539 MTRIX2 13 -0.704503 -0.499617 -0.504042 213.73511 MTRIX3 13 -0.709016 0.464299 0.530775 48.03560 MTRIX1 14 -0.472286 0.856835 0.206834 9.00969 MTRIX2 14 -0.859114 -0.499953 0.109406 172.26180 MTRIX3 14 0.197150 -0.126023 0.972240 -0.26398 MTRIX1 15 0.101253 0.422388 0.900743 -51.47784 MTRIX2 15 -0.406182 -0.808945 0.424999 141.26784 MTRIX3 15 0.908165 -0.408897 0.089658 50.54319 MTRIX1 16 -0.897412 0.005230 -0.441163 162.56489 MTRIX2 16 0.005230 -0.999733 -0.022490 167.58597 MTRIX3 16 -0.441163 -0.022490 0.897145 39.78961 MTRIX1 17 -0.809164 -0.192150 0.555276 89.04311 MTRIX2 17 -0.192150 -0.806527 -0.559101 209.89748 MTRIX3 17 0.555275 -0.559100 0.615691 42.03167 MTRIX1 18 0.054992 -0.714237 0.697740 63.08680 MTRIX2 18 -0.714237 -0.516456 -0.472376 213.10711 MTRIX3 18 0.697739 -0.472375 -0.538536 122.75776 MTRIX1 19 0.500822 -0.839525 -0.210652 120.56670 MTRIX2 19 -0.839525 -0.530389 0.117834 172.77928 MTRIX3 19 -0.210652 0.117834 -0.970433 170.40717 MTRIX1 20 -0.087795 -0.394870 -0.914533 182.04754 MTRIX2 20 -0.394870 -0.829071 0.395878 144.64566 MTRIX3 20 -0.914532 0.395878 -0.083134 119.13003 MTRIX1 21 0.200403 0.237443 -0.950506 113.47691 MTRIX2 21 0.976805 0.026269 0.212510 -1.83372 MTRIX3 21 0.075427 -0.971046 -0.226671 179.10690 MTRIX1 22 -0.679047 0.656294 -0.328896 84.56119 MTRIX2 22 0.656294 0.342011 -0.672537 67.86064 MTRIX3 22 -0.328896 -0.672537 -0.662964 217.93107 MTRIX1 23 -0.493638 0.386178 0.779223 1.21633 MTRIX2 23 -0.202895 0.820134 -0.534989 73.51609 MTRIX3 23 -0.845668 -0.422192 -0.326496 203.01831 MTRIX1 24 0.500400 -0.199615 0.842469 -21.37791 MTRIX2 24 -0.413393 0.799889 0.435068 7.31700 MTRIX3 24 -0.760727 -0.565979 0.317745 154.97755 MTRIX1 25 0.929341 -0.291538 -0.226562 48.00294 MTRIX2 25 0.315702 0.309252 0.897048 -39.25174 MTRIX3 25 -0.191459 -0.905189 0.379440 140.19948 MTRIX1 26 -0.208011 0.215443 0.954105 -18.29562 MTRIX2 26 -0.977193 -0.003181 -0.212327 165.98451 MTRIX3 26 -0.042710 -0.976511 0.211191 150.45393 MTRIX1 27 0.757914 -0.290479 0.584113 -9.10962 MTRIX2 27 -0.652274 -0.323362 0.685548 95.28434 MTRIX3 27 -0.010258 -0.900588 -0.434552 196.47392 MTRIX1 28 0.815013 -0.156016 -0.558044 72.29358 MTRIX2 28 0.219279 -0.808401 0.546265 89.52990 MTRIX3 28 -0.536348 -0.567580 -0.624646 219.73648 MTRIX1 29 -0.115622 0.433009 -0.893944 113.41752 MTRIX2 29 0.433009 -0.787990 -0.437692 156.67363 MTRIX3 29 -0.893943 -0.437693 -0.096387 188.09353 MTRIX1 30 -0.747886 0.662584 0.040616 57.43032 MTRIX2 30 -0.306452 -0.290337 -0.906528 203.92517 MTRIX3 30 -0.588858 -0.690426 0.420189 145.27456 MTRIX1 31 -0.233118 -0.237932 0.942892 21.95790 MTRIX2 31 0.970599 0.002844 0.240685 -1.85425 MTRIX3 31 -0.059948 0.971277 0.230273 -11.73553 MTRIX1 32 0.656709 -0.667232 0.351476 48.50611 MTRIX2 32 0.673421 0.309045 -0.671562 69.38012 MTRIX3 32 0.339465 0.677712 0.652281 -49.43955 MTRIX1 33 0.500400 -0.413393 -0.760727 131.61798 MTRIX2 33 -0.199615 0.799889 -0.565979 77.59392 MTRIX3 33 0.842468 0.435068 0.317745 -34.41655 MTRIX1 34 -0.486030 0.172787 -0.856691 156.43573 MTRIX2 34 -0.442003 0.797046 0.411522 11.43597 MTRIX3 34 0.753928 0.578672 -0.311016 12.57219 MTRIX1 35 -0.939369 0.281228 0.196203 88.66208 MTRIX2 35 0.281229 0.304446 0.910068 -37.66570 MTRIX3 35 0.196204 0.910067 -0.365077 26.58983 MTRIX1 36 0.240726 -0.214954 -0.946492 148.02720 MTRIX2 36 -0.970211 -0.025932 -0.240869 169.81850 MTRIX3 36 0.027231 0.976279 -0.214793 19.61583 MTRIX1 37 -0.735576 0.301416 -0.606693 141.20871 MTRIX2 37 -0.677442 -0.327694 0.658551 99.58995 MTRIX3 37 -0.000311 0.895413 0.445236 -27.52432 MTRIX1 38 -0.821775 0.183231 0.539548 60.03851 MTRIX2 38 0.183231 -0.811622 0.554703 91.47513 MTRIX3 38 0.539548 0.554703 0.633397 -50.89711 MTRIX1 39 0.101252 -0.406182 0.908166 16.69106 MTRIX2 39 0.422387 -0.808945 -0.408898 156.68845 MTRIX3 39 0.900742 0.425000 0.089659 -18.20214 MTRIX1 40 0.757914 -0.652274 -0.010257 71.07106 MTRIX2 40 -0.290479 -0.323362 -0.900589 205.10731 MTRIX3 40 0.584113 0.685548 -0.434552 25.37725 MTRIX1 41 0.200403 0.976806 0.075427 -34.45951 MTRIX2 41 0.237443 0.026268 -0.971047 147.02506 MTRIX3 41 -0.950504 0.212510 -0.226671 148.84835 MTRIX1 42 0.332367 0.851981 0.404550 -60.60846 MTRIX2 42 -0.715951 0.507135 -0.479821 128.86133 MTRIX3 42 -0.613959 -0.130161 0.778532 70.19059 MTRIX1 43 0.656709 0.673422 0.339465 -61.79348 MTRIX2 43 -0.667231 0.309044 0.677712 44.42906 MTRIX3 43 0.351476 -0.671561 0.652280 61.79273 MTRIX1 44 0.725199 0.687891 -0.029882 -36.37693 MTRIX2 44 0.316272 -0.294249 0.901881 10.41077 MTRIX3 44 0.611602 -0.663494 -0.430950 135.26034 MTRIX1 45 0.443187 0.875392 -0.193066 -19.48360 MTRIX2 45 0.875392 -0.469015 -0.117108 73.81858 MTRIX3 45 -0.193066 -0.117108 -0.974172 189.06367 MTRIX1 46 -0.233117 0.970599 -0.059949 6.21497 MTRIX2 46 -0.237932 0.002844 0.971278 16.62822 MTRIX3 46 0.942891 0.240686 0.230273 -17.55524 MTRIX1 47 0.006760 0.721021 0.692881 -52.47365 MTRIX2 47 0.721020 -0.483620 0.496227 33.52369 MTRIX3 47 0.692880 0.496227 -0.523140 41.35933 MTRIX1 48 0.725199 0.316273 0.611603 -59.63776 MTRIX2 48 0.687890 -0.294249 -0.663494 117.83115 MTRIX3 48 -0.029881 0.901881 -0.430950 47.81420 MTRIX1 49 0.929342 0.315703 -0.191459 -5.37682 MTRIX2 49 -0.291538 0.309252 -0.905190 153.04056 MTRIX3 49 -0.226561 0.897048 0.379440 -7.11105 MTRIX1 50 0.337069 0.720099 -0.606501 35.32241 MTRIX2 50 -0.863727 0.492866 0.105155 90.49370 MTRIX3 50 0.374645 0.488407 0.788099 -47.51159 MTRIX1 51 0.240726 -0.970211 0.027231 128.59174 MTRIX2 51 -0.214954 -0.025932 0.976280 17.07225 MTRIX3 51 -0.946491 -0.240869 -0.214794 185.22378 MTRIX1 52 -0.031158 -0.704503 -0.709017 186.66405 MTRIX2 52 0.731306 -0.499617 0.464299 36.86341 MTRIX3 52 -0.681337 -0.504042 0.530775 126.60081 MTRIX1 53 -0.747886 -0.306452 -0.588858 190.99076 MTRIX2 53 0.662583 -0.290336 -0.690426 121.45585 MTRIX3 53 0.040615 -0.906527 0.420189 121.48841 MTRIX1 54 -0.918965 -0.326151 0.221652 135.59250 MTRIX2 54 -0.326150 0.312691 -0.892105 153.94569 MTRIX3 54 0.221652 -0.892104 -0.393726 176.95176 MTRIX1 55 -0.307969 -0.736377 0.602416 97.02779 MTRIX2 55 -0.868498 0.476101 0.137976 89.43308 MTRIX3 55 -0.388413 -0.480705 -0.786166 216.34238 MTRIX1 56 -0.208011 -0.977194 -0.042710 164.81920 MTRIX2 56 0.215443 -0.003180 -0.976512 151.38951 MTRIX3 56 0.954104 -0.212326 0.211191 20.92422 MTRIX1 57 -0.307969 -0.868499 -0.388414 191.58446 MTRIX2 57 -0.736376 0.476101 -0.480705 132.86660 MTRIX3 57 0.602416 0.137976 -0.786166 99.29039 MTRIX1 58 -0.634022 -0.683243 -0.362210 195.60689 MTRIX2 58 -0.683242 0.275541 0.676208 48.39898 MTRIX3 58 -0.362210 0.676208 -0.641519 106.34578 MTRIX1 59 -0.735576 -0.677442 -0.000312 171.32764 MTRIX2 59 0.301416 -0.327693 0.895414 14.71803 MTRIX3 59 -0.606692 0.658550 0.445236 32.34008 MTRIX1 60 -0.472287 -0.859114 0.197150 152.29980 MTRIX2 60 0.856834 -0.499953 -0.126023 78.36968 MTRIX3 60 0.206834 0.109406 0.972240 -20.45335