HEADER DNA BINDING PROTEIN 27-JUN-02 1M36 TITLE SOLUTION STRUCTURE OF A CCHC ZINC FINGER FROM MOZ COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOCYTIC LEUKEMIA ZINC FINGER PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 3-33; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MOZ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-2T KEYWDS ZINC FINGER, ACETYL TRANSFERASE, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.H.Y.KWAN,D.A.GELL,C.K.LIEW,J.P.MACKAY REVDAT 3 23-FEB-22 1M36 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1M36 1 VERSN REVDAT 1 27-JAN-04 1M36 0 JRNL AUTH A.H.Y.KWAN,D.A.GELL,C.K.LIEW,J.P.MACKAY JRNL TITL SOLUTION STRUCTURE OF A CCHC ZINC FINGER FROM MOZ JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 2.5, DYANA 1.5 REMARK 3 AUTHORS : BRUKER (XWINNMR), GUNTERT ET AL (DYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE CALCULATIONS WERE PERFORMED REMARK 3 USING THE PACKAGE ARIA 1.1 (AMBIGUOUS RESTRAINTS IN ITERATIVE REMARK 3 ASSIGNMENT). FINAL STRUCTURES ARE BASED ON 832 UNAMBIGUOUS NOE- REMARK 3 DERIVED DISTANCE CONSTRAINTS, 1 SET OF AMBIGUOUS NOE-DERIVED REMARK 3 DISTANCE CONSTRAINTS AND 19 ADDITIONAL DIHEDRAL ANGLE RESTRAINTS. REMARK 4 REMARK 4 1M36 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUL-02. REMARK 100 THE DEPOSITION ID IS D_1000016539. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 5.6 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5MM MOZ PROTEIN (533-563), 1MM REMARK 210 TCEP, 0.7MM ZNSO4, 95% H2O, 5% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY 1.3.13, ARIA 1.1.2 REMARK 210 METHOD USED : SIMULATED ANNEALING MOLECULAR REMARK 210 DYNAMICS TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THIS STRUCTURE WAS DETERMINED USING STANDARD 2D NMR REMARK 210 HOMONUCLEAR TECHNIQUES REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 14 72.29 62.94 REMARK 500 2 ARG A 3 -80.15 -170.56 REMARK 500 2 LEU A 7 -145.59 -82.31 REMARK 500 2 CYS A 10 -156.33 -73.65 REMARK 500 2 LEU A 14 74.33 57.42 REMARK 500 3 LEU A 14 67.18 69.15 REMARK 500 4 LEU A 7 -154.03 -83.88 REMARK 500 5 PRO A 5 -178.04 -68.74 REMARK 500 5 LEU A 7 -144.52 -103.58 REMARK 500 6 SER A 2 43.92 -89.49 REMARK 500 6 PRO A 5 -73.97 -67.20 REMARK 500 6 GLU A 11 -7.64 75.31 REMARK 500 7 LEU A 7 -153.15 -86.31 REMARK 500 7 GLU A 11 -4.95 73.75 REMARK 500 7 CYS A 30 36.12 -84.36 REMARK 500 8 PRO A 5 -153.32 -87.72 REMARK 500 9 LEU A 7 -148.61 -76.54 REMARK 500 9 TRP A 32 -72.37 -81.78 REMARK 500 10 LEU A 4 135.07 71.49 REMARK 500 10 LEU A 7 -149.95 -122.32 REMARK 500 11 PRO A 5 -77.55 -69.08 REMARK 500 11 LEU A 7 -149.24 -84.84 REMARK 500 12 PRO A 5 -92.11 -75.64 REMARK 500 12 LEU A 7 -156.31 -135.88 REMARK 500 12 TRP A 32 -156.17 -105.36 REMARK 500 13 PRO A 5 -87.46 -62.91 REMARK 500 13 LEU A 7 -136.33 -140.47 REMARK 500 13 GLU A 11 -20.76 80.15 REMARK 500 13 TRP A 32 -69.95 -99.63 REMARK 500 14 ARG A 3 -83.39 -93.58 REMARK 500 14 LEU A 7 -171.70 -68.97 REMARK 500 14 GLU A 11 -1.36 70.61 REMARK 500 14 LYS A 28 -23.94 73.40 REMARK 500 14 CYS A 30 100.56 -54.86 REMARK 500 14 TRP A 32 -85.34 -95.74 REMARK 500 15 LEU A 4 155.60 70.12 REMARK 500 15 LEU A 7 -164.70 64.38 REMARK 500 15 LYS A 28 -11.65 171.15 REMARK 500 15 TRP A 32 -102.04 -119.65 REMARK 500 16 LEU A 7 -167.42 -76.51 REMARK 500 16 GLU A 11 -14.88 72.62 REMARK 500 16 LYS A 28 -52.71 76.08 REMARK 500 17 LYS A 6 64.20 61.90 REMARK 500 17 LEU A 7 -142.72 62.53 REMARK 500 17 GLU A 11 -10.36 77.59 REMARK 500 17 TRP A 32 -73.58 -94.36 REMARK 500 18 LEU A 4 81.82 58.44 REMARK 500 18 PRO A 5 -151.49 -74.32 REMARK 500 18 LEU A 7 -166.31 -116.15 REMARK 500 19 ARG A 3 -72.17 72.10 REMARK 500 REMARK 500 THIS ENTRY HAS 53 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 34 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 10 SG REMARK 620 2 CYS A 13 SG 108.8 REMARK 620 3 HIS A 26 NE2 109.6 110.5 REMARK 620 4 CYS A 30 SG 110.6 108.7 108.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 34 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FY7 RELATED DB: PDB REMARK 900 1FY7 CONTAINS ESA1 (YEAST HOMOLOGUE OF MOZ) HISTONE REMARK 900 ACETYLTRANSFERASE DOMAIN COMPLEXED WITH COENZYME A DBREF 1M36 A 3 33 UNP Q92794 MYST3_HUMAN 533 563 SEQADV 1M36 GLY A 1 UNP Q92794 CLONING ARTIFACT SEQADV 1M36 SER A 2 UNP Q92794 CLONING ARTIFACT SEQRES 1 A 33 GLY SER ARG LEU PRO LYS LEU TYR LEU CYS GLU PHE CYS SEQRES 2 A 33 LEU LYS TYR MET LYS SER ARG THR ILE LEU GLN GLN HIS SEQRES 3 A 33 MET LYS LYS CYS GLY TRP PHE HET ZN A 34 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 1 SER A 19 CYS A 30 1 12 SHEET 1 A 2 TYR A 8 LEU A 9 0 SHEET 2 A 2 TYR A 16 MET A 17 -1 O MET A 17 N TYR A 8 LINK SG CYS A 10 ZN ZN A 34 1555 1555 2.30 LINK SG CYS A 13 ZN ZN A 34 1555 1555 2.29 LINK NE2 HIS A 26 ZN ZN A 34 1555 1555 1.97 LINK SG CYS A 30 ZN ZN A 34 1555 1555 2.31 SITE 1 AC1 4 CYS A 10 CYS A 13 HIS A 26 CYS A 30 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1