data_1M7D
#
_entry.id 1M7D
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.397
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1M7D pdb_00001m7d 10.2210/pdb1m7d/pdb
RCSB RCSB016687 ? ?
WWPDB D_1000016687 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2003-07-22
2 'Structure model' 1 1 2008-04-28
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2011-11-16
5 'Structure model' 1 4 2017-10-11
6 'Structure model' 2 0 2020-07-29
7 'Structure model' 2 1 2024-10-16
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Atomic model'
4 5 'Structure model' 'Refinement description'
5 6 'Structure model' 'Atomic model'
6 6 'Structure model' 'Data collection'
7 6 'Structure model' 'Derived calculations'
8 6 'Structure model' 'Structure summary'
9 7 'Structure model' 'Data collection'
10 7 'Structure model' 'Database references'
11 7 'Structure model' 'Refinement description'
12 7 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 5 'Structure model' software
2 6 'Structure model' atom_site
3 6 'Structure model' chem_comp
4 6 'Structure model' entity
5 6 'Structure model' pdbx_branch_scheme
6 6 'Structure model' pdbx_chem_comp_identifier
7 6 'Structure model' pdbx_entity_branch
8 6 'Structure model' pdbx_entity_branch_descriptor
9 6 'Structure model' pdbx_entity_branch_link
10 6 'Structure model' pdbx_entity_branch_list
11 6 'Structure model' pdbx_entity_nonpoly
12 6 'Structure model' pdbx_nonpoly_scheme
13 6 'Structure model' pdbx_struct_assembly_gen
14 6 'Structure model' pdbx_struct_special_symmetry
15 6 'Structure model' struct_asym
16 6 'Structure model' struct_conn
17 6 'Structure model' struct_site
18 6 'Structure model' struct_site_gen
19 7 'Structure model' chem_comp
20 7 'Structure model' chem_comp_atom
21 7 'Structure model' chem_comp_bond
22 7 'Structure model' database_2
23 7 'Structure model' pdbx_entry_details
24 7 'Structure model' pdbx_initial_refinement_model
25 7 'Structure model' pdbx_modification_feature
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 5 'Structure model' '_software.name'
2 6 'Structure model' '_atom_site.B_iso_or_equiv'
3 6 'Structure model' '_atom_site.Cartn_x'
4 6 'Structure model' '_atom_site.Cartn_y'
5 6 'Structure model' '_atom_site.Cartn_z'
6 6 'Structure model' '_atom_site.auth_asym_id'
7 6 'Structure model' '_atom_site.auth_atom_id'
8 6 'Structure model' '_atom_site.auth_comp_id'
9 6 'Structure model' '_atom_site.auth_seq_id'
10 6 'Structure model' '_atom_site.label_asym_id'
11 6 'Structure model' '_atom_site.label_atom_id'
12 6 'Structure model' '_atom_site.label_comp_id'
13 6 'Structure model' '_atom_site.label_entity_id'
14 6 'Structure model' '_atom_site.type_symbol'
15 6 'Structure model' '_chem_comp.mon_nstd_flag'
16 6 'Structure model' '_chem_comp.name'
17 6 'Structure model' '_chem_comp.type'
18 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
19 6 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
20 6 'Structure model' '_struct_conn.pdbx_dist_value'
21 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
22 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
23 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
24 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
25 6 'Structure model' '_struct_conn.ptnr1_label_asym_id'
26 6 'Structure model' '_struct_conn.ptnr1_label_atom_id'
27 6 'Structure model' '_struct_conn.ptnr1_label_comp_id'
28 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
29 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
30 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
31 6 'Structure model' '_struct_conn.ptnr2_label_asym_id'
32 6 'Structure model' '_struct_conn.ptnr2_label_atom_id'
33 6 'Structure model' '_struct_conn.ptnr2_label_comp_id'
34 7 'Structure model' '_chem_comp.pdbx_synonyms'
35 7 'Structure model' '_database_2.pdbx_DOI'
36 7 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1M7D
_pdbx_database_status.recvd_initial_deposition_date 2002-07-19
_pdbx_database_status.deposit_site RCSB
_pdbx_database_status.process_site RCSB
_pdbx_database_status.SG_entry .
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.details
_pdbx_database_related.content_type
PDB 1MCP 'Phosphocholine binding immunoglobulin Fab McPC603. An X-ray diffraction study at 2.7 A' unspecified
PDB 1M71
;Crystal structure of a Monoclonal Fab Specific for Shigella Flexneri
Y lipopolysaccharide
;
unspecified
PDB 1M7I
;Crystal structure of a Monoclonal Fab Specific for Shigella flexneri
Y Lipopolysaccharide complexed with a pentasaccharide
;
unspecified
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Vyas, N.K.' 1
'Vyas, M.N.' 2
'Chervenak, M.C.' 3
'Johnson, M.A.' 4
'Pinto, B.M.' 5
'Bundle, D.R.' 6
'Quiocho, F.A.' 7
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary
;Molecular Recognition of Oligosaccharide Epitopes by a Monoclonal Fab Specific for Shigella flexneri
Y Lipopolysaccharide: X-ray Structures and Thermodynamics
;
Biochemistry 41 13575 13586 2002 BICHAW US 0006-2960 0033 ? 12427018 10.1021/bi0261387
1
;Preliminary Crystallographic Analysis of a Fab Specific for the O-antigen of Shigella flexneri
Cell Surface Lipoplysacharide with and and without Bound Saccharides
;
J.Mol.Biol. 231 133 136 1993 JMOBAK UK 0022-2836 0070 ? ? 10.1006/jmbi.1993.1262
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Vyas, N.K.' 1 ?
primary 'Vyas, M.N.' 2 ?
primary 'Chervenak, M.C.' 3 ?
primary 'Johnson, M.A.' 4 ?
primary 'Pinto, B.M.' 5 ?
primary 'Bundle, D.R.' 6 ?
primary 'Quiocho, F.A.' 7 ?
1 'Vyas, N.K.' 8 ?
1 'Vyas, M.N.' 9 ?
1 'Meikele, P.J.' 10 ?
1 'Sinnott, B.' 11 ?
1 'Pinto, B.M.' 12 ?
1 'Bundle, D.R.' 13 ?
1 'Quiocho, F.A.' 14 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'light chain of the monoclonal antibody Fab SYA/J6'
23717.350 1 ? ? ? ?
2 polymer man 'heavy chain of the monoclonal antibody Fab SYA/J6'
23547.361 1 ? ? ? ?
3 branched man 'alpha-L-rhamnopyranose-(1-3)-alpha-L-Olivopyranose-(1-3)-methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside'
511.517 1 ? ? ? ?
4 water nat water 18.015
121 ? ? ? ?
#
loop_
_entity_poly.entity_id
_entity_poly.type
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_strand_id
_entity_poly.pdbx_target_identifier
1 'polypeptide(L)' no no
;DVVLTQTPLSLPVRLGDQASISCRSSQSLLHSDGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYFCSQTTHVPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ
NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
;
;DVVLTQTPLSLPVRLGDQASISCRSSQSLLHSDGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYFCSQTTHVPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ
NGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
;
A ?
2 'polypeptide(L)' no no
;EVKVEESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS
VYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVK
WNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKVDLIKEPSGP
;
;EVKVEESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSS
VYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVK
WNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVICNVAHPASKVDLIKEPSGP
;
B ?
#
_pdbx_entity_nonpoly.entity_id 4
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 ASP n
1 2 VAL n
1 3 VAL n
1 4 LEU n
1 5 THR n
1 6 GLN n
1 7 THR n
1 8 PRO n
1 9 LEU n
1 10 SER n
1 11 LEU n
1 12 PRO n
1 13 VAL n
1 14 ARG n
1 15 LEU n
1 16 GLY n
1 17 ASP n
1 18 GLN n
1 19 ALA n
1 20 SER n
1 21 ILE n
1 22 SER n
1 23 CYS n
1 24 ARG n
1 25 SER n
1 26 SER n
1 27 GLN n
1 28 SER n
1 29 LEU n
1 30 LEU n
1 31 HIS n
1 32 SER n
1 33 ASP n
1 34 GLY n
1 35 ASN n
1 36 THR n
1 37 TYR n
1 38 LEU n
1 39 HIS n
1 40 TRP n
1 41 TYR n
1 42 LEU n
1 43 GLN n
1 44 LYS n
1 45 PRO n
1 46 GLY n
1 47 GLN n
1 48 SER n
1 49 PRO n
1 50 LYS n
1 51 LEU n
1 52 LEU n
1 53 ILE n
1 54 TYR n
1 55 LYS n
1 56 VAL n
1 57 SER n
1 58 ASN n
1 59 ARG n
1 60 PHE n
1 61 SER n
1 62 GLY n
1 63 VAL n
1 64 PRO n
1 65 ASP n
1 66 ARG n
1 67 PHE n
1 68 SER n
1 69 GLY n
1 70 SER n
1 71 GLY n
1 72 SER n
1 73 GLY n
1 74 THR n
1 75 ASP n
1 76 PHE n
1 77 THR n
1 78 LEU n
1 79 LYS n
1 80 ILE n
1 81 SER n
1 82 ARG n
1 83 VAL n
1 84 GLU n
1 85 ALA n
1 86 GLU n
1 87 ASP n
1 88 LEU n
1 89 GLY n
1 90 VAL n
1 91 TYR n
1 92 PHE n
1 93 CYS n
1 94 SER n
1 95 GLN n
1 96 THR n
1 97 THR n
1 98 HIS n
1 99 VAL n
1 100 PRO n
1 101 THR n
1 102 PHE n
1 103 GLY n
1 104 GLY n
1 105 GLY n
1 106 THR n
1 107 LYS n
1 108 LEU n
1 109 GLU n
1 110 ILE n
1 111 LYS n
1 112 ARG n
1 113 ALA n
1 114 ASP n
1 115 ALA n
1 116 ALA n
1 117 PRO n
1 118 THR n
1 119 VAL n
1 120 SER n
1 121 ILE n
1 122 PHE n
1 123 PRO n
1 124 PRO n
1 125 SER n
1 126 SER n
1 127 GLU n
1 128 GLN n
1 129 LEU n
1 130 THR n
1 131 SER n
1 132 GLY n
1 133 GLY n
1 134 ALA n
1 135 SER n
1 136 VAL n
1 137 VAL n
1 138 CYS n
1 139 PHE n
1 140 LEU n
1 141 ASN n
1 142 ASN n
1 143 PHE n
1 144 TYR n
1 145 PRO n
1 146 LYS n
1 147 ASP n
1 148 ILE n
1 149 ASN n
1 150 VAL n
1 151 LYS n
1 152 TRP n
1 153 LYS n
1 154 ILE n
1 155 ASP n
1 156 GLY n
1 157 SER n
1 158 GLU n
1 159 ARG n
1 160 GLN n
1 161 ASN n
1 162 GLY n
1 163 VAL n
1 164 LEU n
1 165 ASN n
1 166 SER n
1 167 TRP n
1 168 THR n
1 169 ASP n
1 170 GLN n
1 171 ASP n
1 172 SER n
1 173 LYS n
1 174 ASP n
1 175 SER n
1 176 THR n
1 177 TYR n
1 178 SER n
1 179 MET n
1 180 SER n
1 181 SER n
1 182 THR n
1 183 LEU n
1 184 THR n
1 185 LEU n
1 186 THR n
1 187 LYS n
1 188 ASP n
1 189 GLU n
1 190 TYR n
1 191 GLU n
1 192 ARG n
1 193 HIS n
1 194 ASN n
1 195 SER n
1 196 TYR n
1 197 THR n
1 198 CYS n
1 199 GLU n
1 200 ALA n
1 201 THR n
1 202 HIS n
1 203 LYS n
1 204 THR n
1 205 SER n
1 206 THR n
1 207 SER n
1 208 PRO n
1 209 ILE n
1 210 VAL n
1 211 LYS n
1 212 SER n
1 213 PHE n
1 214 ASN n
1 215 ARG n
2 1 GLU n
2 2 VAL n
2 3 LYS n
2 4 VAL n
2 5 GLU n
2 6 GLU n
2 7 SER n
2 8 GLY n
2 9 GLY n
2 10 GLY n
2 11 LEU n
2 12 VAL n
2 13 GLN n
2 14 PRO n
2 15 GLY n
2 16 GLY n
2 17 SER n
2 18 MET n
2 19 LYS n
2 20 LEU n
2 21 SER n
2 22 CYS n
2 23 VAL n
2 24 ALA n
2 25 SER n
2 26 GLY n
2 27 PHE n
2 28 THR n
2 29 PHE n
2 30 SER n
2 31 ASN n
2 32 TYR n
2 33 TRP n
2 34 MET n
2 35 GLU n
2 36 TRP n
2 37 VAL n
2 38 ARG n
2 39 GLN n
2 40 SER n
2 41 PRO n
2 42 GLU n
2 43 LYS n
2 44 GLY n
2 45 LEU n
2 46 GLU n
2 47 TRP n
2 48 VAL n
2 49 ALA n
2 50 GLU n
2 51 ILE n
2 52 ARG n
2 53 LEU n
2 54 LYS n
2 55 SER n
2 56 ASN n
2 57 ASN n
2 58 TYR n
2 59 ALA n
2 60 THR n
2 61 HIS n
2 62 TYR n
2 63 ALA n
2 64 GLU n
2 65 SER n
2 66 VAL n
2 67 LYS n
2 68 GLY n
2 69 ARG n
2 70 PHE n
2 71 THR n
2 72 ILE n
2 73 SER n
2 74 ARG n
2 75 ASP n
2 76 ASP n
2 77 SER n
2 78 LYS n
2 79 SER n
2 80 SER n
2 81 VAL n
2 82 TYR n
2 83 LEU n
2 84 GLN n
2 85 MET n
2 86 ASN n
2 87 ASN n
2 88 LEU n
2 89 ARG n
2 90 ALA n
2 91 GLU n
2 92 ASP n
2 93 THR n
2 94 GLY n
2 95 ILE n
2 96 TYR n
2 97 TYR n
2 98 CYS n
2 99 THR n
2 100 ARG n
2 101 GLY n
2 102 GLY n
2 103 ALA n
2 104 VAL n
2 105 GLY n
2 106 ALA n
2 107 MET n
2 108 ASP n
2 109 TYR n
2 110 TRP n
2 111 GLY n
2 112 GLN n
2 113 GLY n
2 114 THR n
2 115 SER n
2 116 VAL n
2 117 THR n
2 118 VAL n
2 119 SER n
2 120 SER n
2 121 ALA n
2 122 THR n
2 123 THR n
2 124 THR n
2 125 ALA n
2 126 PRO n
2 127 SER n
2 128 VAL n
2 129 TYR n
2 130 PRO n
2 131 LEU n
2 132 VAL n
2 133 PRO n
2 134 GLY n
2 135 CYS n
2 136 SER n
2 137 ASP n
2 138 THR n
2 139 SER n
2 140 GLY n
2 141 SER n
2 142 SER n
2 143 VAL n
2 144 THR n
2 145 LEU n
2 146 GLY n
2 147 CYS n
2 148 LEU n
2 149 VAL n
2 150 LYS n
2 151 GLY n
2 152 TYR n
2 153 PHE n
2 154 PRO n
2 155 GLU n
2 156 PRO n
2 157 VAL n
2 158 THR n
2 159 VAL n
2 160 LYS n
2 161 TRP n
2 162 ASN n
2 163 TYR n
2 164 GLY n
2 165 ALA n
2 166 LEU n
2 167 SER n
2 168 SER n
2 169 GLY n
2 170 VAL n
2 171 ARG n
2 172 THR n
2 173 VAL n
2 174 SER n
2 175 SER n
2 176 VAL n
2 177 LEU n
2 178 GLN n
2 179 SER n
2 180 GLY n
2 181 PHE n
2 182 TYR n
2 183 SER n
2 184 LEU n
2 185 SER n
2 186 SER n
2 187 LEU n
2 188 VAL n
2 189 THR n
2 190 VAL n
2 191 PRO n
2 192 SER n
2 193 SER n
2 194 THR n
2 195 TRP n
2 196 PRO n
2 197 SER n
2 198 GLN n
2 199 THR n
2 200 VAL n
2 201 ILE n
2 202 CYS n
2 203 ASN n
2 204 VAL n
2 205 ALA n
2 206 HIS n
2 207 PRO n
2 208 ALA n
2 209 SER n
2 210 LYS n
2 211 VAL n
2 212 ASP n
2 213 LEU n
2 214 ILE n
2 215 LYS n
2 216 GLU n
2 217 PRO n
2 218 SER n
2 219 GLY n
2 220 PRO n
#
loop_
_entity_src_gen.entity_id
_entity_src_gen.pdbx_src_id
_entity_src_gen.pdbx_alt_source_flag
_entity_src_gen.pdbx_seq_type
_entity_src_gen.pdbx_beg_seq_num
_entity_src_gen.pdbx_end_seq_num
_entity_src_gen.gene_src_common_name
_entity_src_gen.gene_src_genus
_entity_src_gen.pdbx_gene_src_gene
_entity_src_gen.gene_src_species
_entity_src_gen.gene_src_strain
_entity_src_gen.gene_src_tissue
_entity_src_gen.gene_src_tissue_fraction
_entity_src_gen.gene_src_details
_entity_src_gen.pdbx_gene_src_fragment
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id
_entity_src_gen.pdbx_gene_src_variant
_entity_src_gen.pdbx_gene_src_cell_line
_entity_src_gen.pdbx_gene_src_atcc
_entity_src_gen.pdbx_gene_src_organ
_entity_src_gen.pdbx_gene_src_organelle
_entity_src_gen.pdbx_gene_src_cell
_entity_src_gen.pdbx_gene_src_cellular_location
_entity_src_gen.host_org_common_name
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_entity_src_gen.host_org_genus
_entity_src_gen.pdbx_host_org_gene
_entity_src_gen.pdbx_host_org_organ
_entity_src_gen.host_org_species
_entity_src_gen.pdbx_host_org_tissue
_entity_src_gen.pdbx_host_org_tissue_fraction
_entity_src_gen.pdbx_host_org_strain
_entity_src_gen.pdbx_host_org_variant
_entity_src_gen.pdbx_host_org_cell_line
_entity_src_gen.pdbx_host_org_atcc
_entity_src_gen.pdbx_host_org_culture_collection
_entity_src_gen.pdbx_host_org_cell
_entity_src_gen.pdbx_host_org_organelle
_entity_src_gen.pdbx_host_org_cellular_location
_entity_src_gen.pdbx_host_org_vector_type
_entity_src_gen.pdbx_host_org_vector
_entity_src_gen.host_org_details
_entity_src_gen.expression_system_id
_entity_src_gen.plasmid_name
_entity_src_gen.plasmid_details
_entity_src_gen.pdbx_description
1 1 sample ? ? ? 'house mouse' Mus ? ? Balb/C ? ? ? ? 'Mus musculus' 10090 ? 'SYA/J6 hybridoma' ? Spleen ? 'Plasmacytoma cell' ? ?
'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
2 1 sample ? ? ? 'house mouse' Mus ? ? Balb/C ? ? ? ? 'Mus musculus' 10090 ? 'SYA/J6 hybridoma' ? Spleen ? 'Plasmacytoma cell' ? ?
'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ?
#
_pdbx_entity_branch.entity_id 3
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 3 'LRhapa1-3LOlia1-3DGlcpNAc[1Me]b1-OME' 'Glycam Condensed Sequence'
GMML 1.0
2 3 'WURCS=2.0/3,3,2/[a2122h-1b_1-5_1*OC_2*NCC/3=O][ad211m-1a_1-5][a2211m-1a_1-5]/1-2-3/a3-b1_b3-c1' WURCS
PDB2Glycan 1.1.0
3 3 '[][methyl]{[(1+1)][b-D-GlcpNAc]{[(3+1)][a-L-2,6-deoxy-Glcp]{[(3+1)][a-L-Rhap]{}}}}' LINUCS
PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 3 2 RAE C1 O1 1 MAG O3 HO3 sing ?
2 3 3 RAM C1 O1 2 RAE O3 HO3 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MAG D-saccharide n 'methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside'
;BETA-METHYL-N-ACETYL-D-GLUCOSAMINE; methyl 2-acetamido-2-deoxy-beta-D-glucoside; methyl 2-acetamido-2-deoxy-D-glucoside; methyl 2-acetamido-2-deoxy-glucoside
;
'C9 H17 N O6' 235.234
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
RAE 'L-saccharide, alpha linking' . alpha-L-Olivopyranose
;alpha-L-Olivose; 2,6-dideoxy-alpha-L-arabino-hexopyranose; 2,6-dideoxy-alpha-L-glucopyranose; 2,6-dideoxy-alpha-L-mannopyranose; 2-deoxy-alpha-L-quinovopyranose; 2-deoxy-alpha-L-rhamnoopyranose; L-Olivose; Olivose; 2-DEOXY-ALPHA-RHAMNOSE
;
'C6 H12 O4' 148.157
RAM 'L-saccharide, alpha linking' . alpha-L-rhamnopyranose
'alpha-L-rhamnose; 6-deoxy-alpha-L-mannopyranose; L-rhamnose; rhamnose' 'C6 H12 O5' 164.156
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcpNAc[1Me]b'
MAG 'COMMON NAME' GMML 1.0 1-methyl-N-acetyl-b-D-glucopyranose
MAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-methyl-N-acetyl-D-glucosamine
RAE 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LOlia
RAE 'COMMON NAME' GMML 1.0 a-L-Olivopyranose
RAE 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-2-deoxy-Rhap
RAE 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Oli
RAM 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LRhapa
RAM 'COMMON NAME' GMML 1.0 a-L-rhamnopyranose
RAM 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Rhap
RAM 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Rha
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 ASP 1 1 1 ASP ASP A . n
A 1 2 VAL 2 2 2 VAL VAL A . n
A 1 3 VAL 3 3 3 VAL VAL A . n
A 1 4 LEU 4 4 4 LEU LEU A . n
A 1 5 THR 5 5 5 THR THR A . n
A 1 6 GLN 6 6 6 GLN GLN A . n
A 1 7 THR 7 7 7 THR THR A . n
A 1 8 PRO 8 8 8 PRO PRO A . n
A 1 9 LEU 9 9 9 LEU LEU A . n
A 1 10 SER 10 10 10 SER SER A . n
A 1 11 LEU 11 11 11 LEU LEU A . n
A 1 12 PRO 12 12 12 PRO PRO A . n
A 1 13 VAL 13 13 13 VAL VAL A . n
A 1 14 ARG 14 14 14 ARG ARG A . n
A 1 15 LEU 15 15 15 LEU LEU A . n
A 1 16 GLY 16 16 16 GLY GLY A . n
A 1 17 ASP 17 17 17 ASP ASP A . n
A 1 18 GLN 18 18 18 GLN GLN A . n
A 1 19 ALA 19 19 19 ALA ALA A . n
A 1 20 SER 20 20 20 SER SER A . n
A 1 21 ILE 21 21 21 ILE ILE A . n
A 1 22 SER 22 22 22 SER SER A . n
A 1 23 CYS 23 23 23 CYS CYS A . n
A 1 24 ARG 24 24 24 ARG ARG A . n
A 1 25 SER 25 25 25 SER SER A . n
A 1 26 SER 26 26 26 SER SER A . n
A 1 27 GLN 27 27 27 GLN GLN A . n
A 1 28 SER 28 27 27 SER SER A A n
A 1 29 LEU 29 27 27 LEU LEU A B n
A 1 30 LEU 30 27 27 LEU LEU A C n
A 1 31 HIS 31 27 27 HIS HIS A D n
A 1 32 SER 32 27 27 SER SER A E n
A 1 33 ASP 33 28 28 ASP ASP A . n
A 1 34 GLY 34 29 29 GLY GLY A . n
A 1 35 ASN 35 30 30 ASN ASN A . n
A 1 36 THR 36 31 31 THR THR A . n
A 1 37 TYR 37 32 32 TYR TYR A . n
A 1 38 LEU 38 33 33 LEU LEU A . n
A 1 39 HIS 39 34 34 HIS HIS A . n
A 1 40 TRP 40 35 35 TRP TRP A . n
A 1 41 TYR 41 36 36 TYR TYR A . n
A 1 42 LEU 42 37 37 LEU LEU A . n
A 1 43 GLN 43 38 38 GLN GLN A . n
A 1 44 LYS 44 39 39 LYS LYS A . n
A 1 45 PRO 45 40 40 PRO PRO A . n
A 1 46 GLY 46 41 41 GLY GLY A . n
A 1 47 GLN 47 42 42 GLN GLN A . n
A 1 48 SER 48 43 43 SER SER A . n
A 1 49 PRO 49 44 44 PRO PRO A . n
A 1 50 LYS 50 45 45 LYS LYS A . n
A 1 51 LEU 51 46 46 LEU LEU A . n
A 1 52 LEU 52 47 47 LEU LEU A . n
A 1 53 ILE 53 48 48 ILE ILE A . n
A 1 54 TYR 54 49 49 TYR TYR A . n
A 1 55 LYS 55 50 50 LYS LYS A . n
A 1 56 VAL 56 51 51 VAL VAL A . n
A 1 57 SER 57 52 52 SER SER A . n
A 1 58 ASN 58 53 53 ASN ASN A . n
A 1 59 ARG 59 54 54 ARG ARG A . n
A 1 60 PHE 60 55 55 PHE PHE A . n
A 1 61 SER 61 56 56 SER SER A . n
A 1 62 GLY 62 57 57 GLY GLY A . n
A 1 63 VAL 63 58 58 VAL VAL A . n
A 1 64 PRO 64 59 59 PRO PRO A . n
A 1 65 ASP 65 60 60 ASP ASP A . n
A 1 66 ARG 66 61 61 ARG ARG A . n
A 1 67 PHE 67 62 62 PHE PHE A . n
A 1 68 SER 68 63 63 SER SER A . n
A 1 69 GLY 69 64 64 GLY GLY A . n
A 1 70 SER 70 65 65 SER SER A . n
A 1 71 GLY 71 66 66 GLY GLY A . n
A 1 72 SER 72 67 67 SER SER A . n
A 1 73 GLY 73 68 68 GLY GLY A . n
A 1 74 THR 74 69 69 THR THR A . n
A 1 75 ASP 75 70 70 ASP ASP A . n
A 1 76 PHE 76 71 71 PHE PHE A . n
A 1 77 THR 77 72 72 THR THR A . n
A 1 78 LEU 78 73 73 LEU LEU A . n
A 1 79 LYS 79 74 74 LYS LYS A . n
A 1 80 ILE 80 75 75 ILE ILE A . n
A 1 81 SER 81 76 76 SER SER A . n
A 1 82 ARG 82 77 77 ARG ARG A . n
A 1 83 VAL 83 78 78 VAL VAL A . n
A 1 84 GLU 84 79 79 GLU GLU A . n
A 1 85 ALA 85 80 80 ALA ALA A . n
A 1 86 GLU 86 81 81 GLU GLU A . n
A 1 87 ASP 87 82 82 ASP ASP A . n
A 1 88 LEU 88 83 83 LEU LEU A . n
A 1 89 GLY 89 84 84 GLY GLY A . n
A 1 90 VAL 90 85 85 VAL VAL A . n
A 1 91 TYR 91 86 86 TYR TYR A . n
A 1 92 PHE 92 87 87 PHE PHE A . n
A 1 93 CYS 93 88 88 CYS CYS A . n
A 1 94 SER 94 89 89 SER SER A . n
A 1 95 GLN 95 90 90 GLN GLN A . n
A 1 96 THR 96 91 91 THR THR A . n
A 1 97 THR 97 92 92 THR THR A . n
A 1 98 HIS 98 93 93 HIS HIS A . n
A 1 99 VAL 99 94 94 VAL VAL A . n
A 1 100 PRO 100 95 95 PRO PRO A . n
A 1 101 THR 101 97 97 THR THR A . n
A 1 102 PHE 102 98 98 PHE PHE A . n
A 1 103 GLY 103 99 99 GLY GLY A . n
A 1 104 GLY 104 100 100 GLY GLY A . n
A 1 105 GLY 105 101 101 GLY GLY A . n
A 1 106 THR 106 102 102 THR THR A . n
A 1 107 LYS 107 103 103 LYS LYS A . n
A 1 108 LEU 108 104 104 LEU LEU A . n
A 1 109 GLU 109 105 105 GLU GLU A . n
A 1 110 ILE 110 106 106 ILE ILE A . n
A 1 111 LYS 111 107 107 LYS LYS A . n
A 1 112 ARG 112 108 108 ARG ARG A . n
A 1 113 ALA 113 109 109 ALA ALA A . n
A 1 114 ASP 114 110 110 ASP ASP A . n
A 1 115 ALA 115 111 111 ALA ALA A . n
A 1 116 ALA 116 112 112 ALA ALA A . n
A 1 117 PRO 117 113 113 PRO PRO A . n
A 1 118 THR 118 114 114 THR THR A . n
A 1 119 VAL 119 115 115 VAL VAL A . n
A 1 120 SER 120 116 116 SER SER A . n
A 1 121 ILE 121 117 117 ILE ILE A . n
A 1 122 PHE 122 118 118 PHE PHE A . n
A 1 123 PRO 123 119 119 PRO PRO A . n
A 1 124 PRO 124 120 120 PRO PRO A . n
A 1 125 SER 125 121 121 SER SER A . n
A 1 126 SER 126 122 122 SER SER A . n
A 1 127 GLU 127 123 123 GLU GLU A . n
A 1 128 GLN 128 124 124 GLN GLN A . n
A 1 129 LEU 129 125 125 LEU LEU A . n
A 1 130 THR 130 126 126 THR THR A . n
A 1 131 SER 131 127 127 SER SER A . n
A 1 132 GLY 132 128 128 GLY GLY A . n
A 1 133 GLY 133 129 129 GLY GLY A . n
A 1 134 ALA 134 130 130 ALA ALA A . n
A 1 135 SER 135 131 131 SER SER A . n
A 1 136 VAL 136 132 132 VAL VAL A . n
A 1 137 VAL 137 133 133 VAL VAL A . n
A 1 138 CYS 138 134 134 CYS CYS A . n
A 1 139 PHE 139 135 135 PHE PHE A . n
A 1 140 LEU 140 136 136 LEU LEU A . n
A 1 141 ASN 141 137 137 ASN ASN A . n
A 1 142 ASN 142 138 138 ASN ASN A . n
A 1 143 PHE 143 139 139 PHE PHE A . n
A 1 144 TYR 144 140 140 TYR TYR A . n
A 1 145 PRO 145 141 141 PRO PRO A . n
A 1 146 LYS 146 142 142 LYS LYS A . n
A 1 147 ASP 147 143 143 ASP ASP A . n
A 1 148 ILE 148 144 144 ILE ILE A . n
A 1 149 ASN 149 145 145 ASN ASN A . n
A 1 150 VAL 150 146 146 VAL VAL A . n
A 1 151 LYS 151 147 147 LYS LYS A . n
A 1 152 TRP 152 148 148 TRP TRP A . n
A 1 153 LYS 153 149 149 LYS LYS A . n
A 1 154 ILE 154 150 150 ILE ILE A . n
A 1 155 ASP 155 151 151 ASP ASP A . n
A 1 156 GLY 156 152 152 GLY GLY A . n
A 1 157 SER 157 153 153 SER SER A . n
A 1 158 GLU 158 154 154 GLU GLU A . n
A 1 159 ARG 159 155 155 ARG ARG A . n
A 1 160 GLN 160 156 156 GLN GLN A . n
A 1 161 ASN 161 157 157 ASN ASN A . n
A 1 162 GLY 162 158 158 GLY GLY A . n
A 1 163 VAL 163 159 159 VAL VAL A . n
A 1 164 LEU 164 160 160 LEU LEU A . n
A 1 165 ASN 165 161 161 ASN ASN A . n
A 1 166 SER 166 162 162 SER SER A . n
A 1 167 TRP 167 163 163 TRP TRP A . n
A 1 168 THR 168 164 164 THR THR A . n
A 1 169 ASP 169 165 165 ASP ASP A . n
A 1 170 GLN 170 166 166 GLN GLN A . n
A 1 171 ASP 171 167 167 ASP ASP A . n
A 1 172 SER 172 168 168 SER SER A . n
A 1 173 LYS 173 169 169 LYS LYS A . n
A 1 174 ASP 174 170 170 ASP ASP A . n
A 1 175 SER 175 171 171 SER SER A . n
A 1 176 THR 176 172 172 THR THR A . n
A 1 177 TYR 177 173 173 TYR TYR A . n
A 1 178 SER 178 174 174 SER SER A . n
A 1 179 MET 179 175 175 MET MET A . n
A 1 180 SER 180 176 176 SER SER A . n
A 1 181 SER 181 177 177 SER SER A . n
A 1 182 THR 182 178 178 THR THR A . n
A 1 183 LEU 183 179 179 LEU LEU A . n
A 1 184 THR 184 180 180 THR THR A . n
A 1 185 LEU 185 181 181 LEU LEU A . n
A 1 186 THR 186 182 182 THR THR A . n
A 1 187 LYS 187 183 183 LYS LYS A . n
A 1 188 ASP 188 184 184 ASP ASP A . n
A 1 189 GLU 189 185 185 GLU GLU A . n
A 1 190 TYR 190 186 186 TYR TYR A . n
A 1 191 GLU 191 187 187 GLU GLU A . n
A 1 192 ARG 192 188 188 ARG ARG A . n
A 1 193 HIS 193 189 189 HIS HIS A . n
A 1 194 ASN 194 190 190 ASN ASN A . n
A 1 195 SER 195 191 191 SER SER A . n
A 1 196 TYR 196 192 192 TYR TYR A . n
A 1 197 THR 197 193 193 THR THR A . n
A 1 198 CYS 198 194 194 CYS CYS A . n
A 1 199 GLU 199 195 195 GLU GLU A . n
A 1 200 ALA 200 196 196 ALA ALA A . n
A 1 201 THR 201 197 197 THR THR A . n
A 1 202 HIS 202 198 198 HIS HIS A . n
A 1 203 LYS 203 199 199 LYS LYS A . n
A 1 204 THR 204 200 200 THR THR A . n
A 1 205 SER 205 201 201 SER SER A . n
A 1 206 THR 206 202 202 THR THR A . n
A 1 207 SER 207 203 203 SER SER A . n
A 1 208 PRO 208 204 204 PRO PRO A . n
A 1 209 ILE 209 205 205 ILE ILE A . n
A 1 210 VAL 210 206 206 VAL VAL A . n
A 1 211 LYS 211 207 207 LYS LYS A . n
A 1 212 SER 212 208 208 SER SER A . n
A 1 213 PHE 213 209 209 PHE PHE A . n
A 1 214 ASN 214 210 210 ASN ASN A . n
A 1 215 ARG 215 211 211 ARG ARG A . n
B 2 1 GLU 1 1 1 GLU GLU B . n
B 2 2 VAL 2 2 2 VAL VAL B . n
B 2 3 LYS 3 3 3 LYS LYS B . n
B 2 4 VAL 4 4 4 VAL VAL B . n
B 2 5 GLU 5 5 5 GLU GLU B . n
B 2 6 GLU 6 6 6 GLU GLU B . n
B 2 7 SER 7 7 7 SER SER B . n
B 2 8 GLY 8 8 8 GLY GLY B . n
B 2 9 GLY 9 9 9 GLY GLY B . n
B 2 10 GLY 10 10 10 GLY GLY B . n
B 2 11 LEU 11 11 11 LEU LEU B . n
B 2 12 VAL 12 12 12 VAL VAL B . n
B 2 13 GLN 13 13 13 GLN GLN B . n
B 2 14 PRO 14 14 14 PRO PRO B . n
B 2 15 GLY 15 15 15 GLY GLY B . n
B 2 16 GLY 16 16 16 GLY GLY B . n
B 2 17 SER 17 17 17 SER SER B . n
B 2 18 MET 18 18 18 MET MET B . n
B 2 19 LYS 19 19 19 LYS LYS B . n
B 2 20 LEU 20 20 20 LEU LEU B . n
B 2 21 SER 21 21 21 SER SER B . n
B 2 22 CYS 22 22 22 CYS CYS B . n
B 2 23 VAL 23 23 23 VAL VAL B . n
B 2 24 ALA 24 24 24 ALA ALA B . n
B 2 25 SER 25 25 25 SER SER B . n
B 2 26 GLY 26 26 26 GLY GLY B . n
B 2 27 PHE 27 27 27 PHE PHE B . n
B 2 28 THR 28 28 28 THR THR B . n
B 2 29 PHE 29 29 29 PHE PHE B . n
B 2 30 SER 30 30 30 SER SER B . n
B 2 31 ASN 31 31 31 ASN ASN B . n
B 2 32 TYR 32 32 32 TYR TYR B . n
B 2 33 TRP 33 33 33 TRP TRP B . n
B 2 34 MET 34 34 34 MET MET B . n
B 2 35 GLU 35 35 35 GLU GLU B . n
B 2 36 TRP 36 36 36 TRP TRP B . n
B 2 37 VAL 37 37 37 VAL VAL B . n
B 2 38 ARG 38 38 38 ARG ARG B . n
B 2 39 GLN 39 39 39 GLN GLN B . n
B 2 40 SER 40 40 40 SER SER B . n
B 2 41 PRO 41 41 41 PRO PRO B . n
B 2 42 GLU 42 42 42 GLU GLU B . n
B 2 43 LYS 43 43 43 LYS LYS B . n
B 2 44 GLY 44 44 44 GLY GLY B . n
B 2 45 LEU 45 45 45 LEU LEU B . n
B 2 46 GLU 46 46 46 GLU GLU B . n
B 2 47 TRP 47 47 47 TRP TRP B . n
B 2 48 VAL 48 48 48 VAL VAL B . n
B 2 49 ALA 49 49 49 ALA ALA B . n
B 2 50 GLU 50 50 50 GLU GLU B . n
B 2 51 ILE 51 51 51 ILE ILE B . n
B 2 52 ARG 52 52 52 ARG ARG B . n
B 2 53 LEU 53 52 52 LEU LEU B A n
B 2 54 LYS 54 52 52 LYS LYS B B n
B 2 55 SER 55 52 52 SER SER B C n
B 2 56 ASN 56 53 53 ASN ASN B . n
B 2 57 ASN 57 54 54 ASN ASN B . n
B 2 58 TYR 58 55 55 TYR TYR B . n
B 2 59 ALA 59 56 56 ALA ALA B . n
B 2 60 THR 60 57 57 THR THR B . n
B 2 61 HIS 61 58 58 HIS HIS B . n
B 2 62 TYR 62 59 59 TYR TYR B . n
B 2 63 ALA 63 60 60 ALA ALA B . n
B 2 64 GLU 64 61 61 GLU GLU B . n
B 2 65 SER 65 62 62 SER SER B . n
B 2 66 VAL 66 63 63 VAL VAL B . n
B 2 67 LYS 67 64 64 LYS LYS B . n
B 2 68 GLY 68 65 65 GLY GLY B . n
B 2 69 ARG 69 66 66 ARG ARG B . n
B 2 70 PHE 70 67 67 PHE PHE B . n
B 2 71 THR 71 68 68 THR THR B . n
B 2 72 ILE 72 69 69 ILE ILE B . n
B 2 73 SER 73 70 70 SER SER B . n
B 2 74 ARG 74 71 71 ARG ARG B . n
B 2 75 ASP 75 72 72 ASP ASP B . n
B 2 76 ASP 76 73 73 ASP ASP B . n
B 2 77 SER 77 74 74 SER SER B . n
B 2 78 LYS 78 75 75 LYS LYS B . n
B 2 79 SER 79 76 76 SER SER B . n
B 2 80 SER 80 77 77 SER SER B . n
B 2 81 VAL 81 78 78 VAL VAL B . n
B 2 82 TYR 82 79 79 TYR TYR B . n
B 2 83 LEU 83 80 80 LEU LEU B . n
B 2 84 GLN 84 81 81 GLN GLN B . n
B 2 85 MET 85 82 82 MET MET B . n
B 2 86 ASN 86 82 82 ASN ASN B A n
B 2 87 ASN 87 82 82 ASN ASN B B n
B 2 88 LEU 88 82 82 LEU LEU B C n
B 2 89 ARG 89 83 83 ARG ARG B . n
B 2 90 ALA 90 84 84 ALA ALA B . n
B 2 91 GLU 91 85 85 GLU GLU B . n
B 2 92 ASP 92 86 86 ASP ASP B . n
B 2 93 THR 93 87 87 THR THR B . n
B 2 94 GLY 94 88 88 GLY GLY B . n
B 2 95 ILE 95 89 89 ILE ILE B . n
B 2 96 TYR 96 90 90 TYR TYR B . n
B 2 97 TYR 97 91 91 TYR TYR B . n
B 2 98 CYS 98 92 92 CYS CYS B . n
B 2 99 THR 99 93 93 THR THR B . n
B 2 100 ARG 100 94 94 ARG ARG B . n
B 2 101 GLY 101 95 95 GLY GLY B . n
B 2 102 GLY 102 96 96 GLY GLY B . n
B 2 103 ALA 103 97 97 ALA ALA B . n
B 2 104 VAL 104 98 98 VAL VAL B . n
B 2 105 GLY 105 99 99 GLY GLY B . n
B 2 106 ALA 106 100 100 ALA ALA B . n
B 2 107 MET 107 100 100 MET MET B A n
B 2 108 ASP 108 101 101 ASP ASP B . n
B 2 109 TYR 109 102 102 TYR TYR B . n
B 2 110 TRP 110 103 103 TRP TRP B . n
B 2 111 GLY 111 104 104 GLY GLY B . n
B 2 112 GLN 112 105 105 GLN GLN B . n
B 2 113 GLY 113 106 106 GLY GLY B . n
B 2 114 THR 114 107 107 THR THR B . n
B 2 115 SER 115 108 108 SER SER B . n
B 2 116 VAL 116 109 109 VAL VAL B . n
B 2 117 THR 117 110 110 THR THR B . n
B 2 118 VAL 118 111 111 VAL VAL B . n
B 2 119 SER 119 112 112 SER SER B . n
B 2 120 SER 120 113 113 SER SER B . n
B 2 121 ALA 121 114 114 ALA ALA B . n
B 2 122 THR 122 115 115 THR THR B . n
B 2 123 THR 123 116 116 THR THR B . n
B 2 124 THR 124 117 117 THR THR B . n
B 2 125 ALA 125 118 118 ALA ALA B . n
B 2 126 PRO 126 119 119 PRO PRO B . n
B 2 127 SER 127 120 120 SER SER B . n
B 2 128 VAL 128 121 121 VAL VAL B . n
B 2 129 TYR 129 122 122 TYR TYR B . n
B 2 130 PRO 130 123 123 PRO PRO B . n
B 2 131 LEU 131 124 124 LEU LEU B . n
B 2 132 VAL 132 125 125 VAL VAL B . n
B 2 133 PRO 133 126 126 PRO PRO B . n
B 2 134 GLY 134 127 127 GLY GLY B . n
B 2 135 CYS 135 128 128 CYS CYS B . n
B 2 136 SER 136 129 129 SER SER B . n
B 2 137 ASP 137 130 130 ASP ASP B . n
B 2 138 THR 138 131 131 THR THR B . n
B 2 139 SER 139 132 132 SER SER B . n
B 2 140 GLY 140 133 133 GLY GLY B . n
B 2 141 SER 141 134 134 SER SER B . n
B 2 142 SER 142 135 135 SER SER B . n
B 2 143 VAL 143 136 136 VAL VAL B . n
B 2 144 THR 144 137 137 THR THR B . n
B 2 145 LEU 145 138 138 LEU LEU B . n
B 2 146 GLY 146 139 139 GLY GLY B . n
B 2 147 CYS 147 140 140 CYS CYS B . n
B 2 148 LEU 148 141 141 LEU LEU B . n
B 2 149 VAL 149 142 142 VAL VAL B . n
B 2 150 LYS 150 143 143 LYS LYS B . n
B 2 151 GLY 151 144 144 GLY GLY B . n
B 2 152 TYR 152 145 145 TYR TYR B . n
B 2 153 PHE 153 146 146 PHE PHE B . n
B 2 154 PRO 154 147 147 PRO PRO B . n
B 2 155 GLU 155 148 148 GLU GLU B . n
B 2 156 PRO 156 149 149 PRO PRO B . n
B 2 157 VAL 157 150 150 VAL VAL B . n
B 2 158 THR 158 151 151 THR THR B . n
B 2 159 VAL 159 152 152 VAL VAL B . n
B 2 160 LYS 160 153 153 LYS LYS B . n
B 2 161 TRP 161 154 154 TRP TRP B . n
B 2 162 ASN 162 155 155 ASN ASN B . n
B 2 163 TYR 163 156 156 TYR TYR B . n
B 2 164 GLY 164 157 157 GLY GLY B . n
B 2 165 ALA 165 158 158 ALA ALA B . n
B 2 166 LEU 166 159 159 LEU LEU B . n
B 2 167 SER 167 160 160 SER SER B . n
B 2 168 SER 168 161 161 SER SER B . n
B 2 169 GLY 169 162 162 GLY GLY B . n
B 2 170 VAL 170 163 163 VAL VAL B . n
B 2 171 ARG 171 164 164 ARG ARG B . n
B 2 172 THR 172 165 165 THR THR B . n
B 2 173 VAL 173 166 166 VAL VAL B . n
B 2 174 SER 174 167 167 SER SER B . n
B 2 175 SER 175 168 168 SER SER B . n
B 2 176 VAL 176 169 169 VAL VAL B . n
B 2 177 LEU 177 170 170 LEU LEU B . n
B 2 178 GLN 178 171 171 GLN GLN B . n
B 2 179 SER 179 172 172 SER SER B . n
B 2 180 GLY 180 173 173 GLY GLY B . n
B 2 181 PHE 181 174 174 PHE PHE B . n
B 2 182 TYR 182 175 175 TYR TYR B . n
B 2 183 SER 183 176 176 SER SER B . n
B 2 184 LEU 184 177 177 LEU LEU B . n
B 2 185 SER 185 178 178 SER SER B . n
B 2 186 SER 186 179 179 SER SER B . n
B 2 187 LEU 187 180 180 LEU LEU B . n
B 2 188 VAL 188 181 181 VAL VAL B . n
B 2 189 THR 189 182 182 THR THR B . n
B 2 190 VAL 190 183 183 VAL VAL B . n
B 2 191 PRO 191 184 184 PRO PRO B . n
B 2 192 SER 192 185 185 SER SER B . n
B 2 193 SER 193 186 186 SER SER B . n
B 2 194 THR 194 187 187 THR THR B . n
B 2 195 TRP 195 188 188 TRP TRP B . n
B 2 196 PRO 196 189 189 PRO PRO B . n
B 2 197 SER 197 190 190 SER SER B . n
B 2 198 GLN 198 191 191 GLN GLN B . n
B 2 199 THR 199 192 192 THR THR B . n
B 2 200 VAL 200 193 193 VAL VAL B . n
B 2 201 ILE 201 194 194 ILE ILE B . n
B 2 202 CYS 202 195 195 CYS CYS B . n
B 2 203 ASN 203 196 196 ASN ASN B . n
B 2 204 VAL 204 197 197 VAL VAL B . n
B 2 205 ALA 205 198 198 ALA ALA B . n
B 2 206 HIS 206 199 199 HIS HIS B . n
B 2 207 PRO 207 200 200 PRO PRO B . n
B 2 208 ALA 208 201 201 ALA ALA B . n
B 2 209 SER 209 202 202 SER SER B . n
B 2 210 LYS 210 203 203 LYS LYS B . n
B 2 211 VAL 211 204 204 VAL VAL B . n
B 2 212 ASP 212 205 205 ASP ASP B . n
B 2 213 LEU 213 206 206 LEU LEU B . n
B 2 214 ILE 214 207 207 ILE ILE B . n
B 2 215 LYS 215 208 208 LYS LYS B . n
B 2 216 GLU 216 209 209 GLU GLU B . n
B 2 217 PRO 217 210 210 PRO PRO B . n
B 2 218 SER 218 211 211 SER SER B . n
B 2 219 GLY 219 212 212 GLY GLY B . n
B 2 220 PRO 220 213 213 PRO PRO B . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
C 3 MAG 1 C MAG 1 C NGA 3 n
C 3 RAE 2 C RAE 2 C RH2 2 n
C 3 RAM 3 C RAM 3 C RHA 1 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 HOH 1 404 1 HOH TIP A .
D 4 HOH 2 405 2 HOH TIP A .
D 4 HOH 3 406 3 HOH TIP A .
D 4 HOH 4 407 5 HOH TIP A .
D 4 HOH 5 408 7 HOH TIP A .
D 4 HOH 6 409 8 HOH TIP A .
D 4 HOH 7 410 9 HOH TIP A .
D 4 HOH 8 411 10 HOH TIP A .
D 4 HOH 9 412 11 HOH TIP A .
D 4 HOH 10 413 12 HOH TIP A .
D 4 HOH 11 414 13 HOH TIP A .
D 4 HOH 12 415 15 HOH TIP A .
D 4 HOH 13 416 16 HOH TIP A .
D 4 HOH 14 417 17 HOH TIP A .
D 4 HOH 15 418 20 HOH TIP A .
D 4 HOH 16 419 21 HOH TIP A .
D 4 HOH 17 420 23 HOH TIP A .
D 4 HOH 18 421 26 HOH TIP A .
D 4 HOH 19 422 28 HOH TIP A .
D 4 HOH 20 423 30 HOH TIP A .
D 4 HOH 21 424 32 HOH TIP A .
D 4 HOH 22 425 33 HOH TIP A .
D 4 HOH 23 426 34 HOH TIP A .
D 4 HOH 24 427 35 HOH TIP A .
D 4 HOH 25 428 36 HOH TIP A .
D 4 HOH 26 429 37 HOH TIP A .
D 4 HOH 27 430 38 HOH TIP A .
D 4 HOH 28 431 40 HOH TIP A .
D 4 HOH 29 432 42 HOH TIP A .
D 4 HOH 30 433 43 HOH TIP A .
D 4 HOH 31 434 47 HOH TIP A .
D 4 HOH 32 435 48 HOH TIP A .
D 4 HOH 33 436 51 HOH TIP A .
D 4 HOH 34 437 54 HOH TIP A .
D 4 HOH 35 438 55 HOH TIP A .
D 4 HOH 36 439 59 HOH TIP A .
D 4 HOH 37 440 62 HOH TIP A .
D 4 HOH 38 441 66 HOH TIP A .
D 4 HOH 39 442 69 HOH TIP A .
D 4 HOH 40 443 72 HOH TIP A .
D 4 HOH 41 444 73 HOH TIP A .
D 4 HOH 42 445 74 HOH TIP A .
D 4 HOH 43 446 75 HOH TIP A .
D 4 HOH 44 447 77 HOH TIP A .
D 4 HOH 45 448 79 HOH TIP A .
D 4 HOH 46 449 81 HOH TIP A .
D 4 HOH 47 450 82 HOH TIP A .
D 4 HOH 48 451 83 HOH TIP A .
D 4 HOH 49 452 84 HOH TIP A .
D 4 HOH 50 453 85 HOH TIP A .
D 4 HOH 51 454 87 HOH TIP A .
D 4 HOH 52 455 88 HOH TIP A .
D 4 HOH 53 456 89 HOH TIP A .
D 4 HOH 54 457 90 HOH TIP A .
D 4 HOH 55 458 91 HOH TIP A .
D 4 HOH 56 459 92 HOH TIP A .
D 4 HOH 57 460 93 HOH TIP A .
D 4 HOH 58 461 94 HOH TIP A .
D 4 HOH 59 462 95 HOH TIP A .
D 4 HOH 60 463 97 HOH TIP A .
D 4 HOH 61 464 98 HOH TIP A .
D 4 HOH 62 465 115 HOH TIP A .
E 4 HOH 1 214 4 HOH TIP B .
E 4 HOH 2 215 6 HOH TIP B .
E 4 HOH 3 216 14 HOH TIP B .
E 4 HOH 4 217 18 HOH TIP B .
E 4 HOH 5 218 19 HOH TIP B .
E 4 HOH 6 219 22 HOH TIP B .
E 4 HOH 7 220 24 HOH TIP B .
E 4 HOH 8 221 25 HOH TIP B .
E 4 HOH 9 222 27 HOH TIP B .
E 4 HOH 10 223 29 HOH TIP B .
E 4 HOH 11 224 31 HOH TIP B .
E 4 HOH 12 225 39 HOH TIP B .
E 4 HOH 13 226 41 HOH TIP B .
E 4 HOH 14 227 44 HOH TIP B .
E 4 HOH 15 228 45 HOH TIP B .
E 4 HOH 16 229 46 HOH TIP B .
E 4 HOH 17 230 49 HOH TIP B .
E 4 HOH 18 231 50 HOH TIP B .
E 4 HOH 19 232 52 HOH TIP B .
E 4 HOH 20 233 53 HOH TIP B .
E 4 HOH 21 234 56 HOH TIP B .
E 4 HOH 22 235 57 HOH TIP B .
E 4 HOH 23 236 58 HOH TIP B .
E 4 HOH 24 237 60 HOH TIP B .
E 4 HOH 25 238 61 HOH TIP B .
E 4 HOH 26 239 63 HOH TIP B .
E 4 HOH 27 240 64 HOH TIP B .
E 4 HOH 28 241 65 HOH TIP B .
E 4 HOH 29 242 67 HOH TIP B .
E 4 HOH 30 243 68 HOH TIP B .
E 4 HOH 31 244 70 HOH TIP B .
E 4 HOH 32 245 71 HOH TIP B .
E 4 HOH 33 246 76 HOH TIP B .
E 4 HOH 34 247 78 HOH TIP B .
E 4 HOH 35 248 80 HOH TIP B .
E 4 HOH 36 249 86 HOH TIP B .
E 4 HOH 37 250 96 HOH TIP B .
E 4 HOH 38 251 99 HOH TIP B .
E 4 HOH 39 252 100 HOH TIP B .
E 4 HOH 40 253 101 HOH TIP B .
E 4 HOH 41 254 102 HOH TIP B .
E 4 HOH 42 255 103 HOH TIP B .
E 4 HOH 43 256 104 HOH TIP B .
E 4 HOH 44 257 105 HOH TIP B .
E 4 HOH 45 258 106 HOH TIP B .
E 4 HOH 46 259 107 HOH TIP B .
E 4 HOH 47 260 108 HOH TIP B .
E 4 HOH 48 261 109 HOH TIP B .
E 4 HOH 49 262 110 HOH TIP B .
E 4 HOH 50 263 111 HOH TIP B .
E 4 HOH 51 264 112 HOH TIP B .
E 4 HOH 52 265 113 HOH TIP B .
E 4 HOH 53 266 114 HOH TIP B .
E 4 HOH 54 267 116 HOH TIP B .
E 4 HOH 55 268 117 HOH TIP B .
E 4 HOH 56 269 118 HOH TIP B .
E 4 HOH 57 270 119 HOH TIP B .
E 4 HOH 58 271 120 HOH TIP B .
E 4 HOH 59 272 121 HOH TIP B .
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
Weissenberg 'data collection' . ? 1
WEIS 'data reduction' . ? 2
Protein 'data reduction' . ? 3
MERLOT phasing . ? 4
CNS refinement 1.0 ? 5
WEISSENBERG 'data reduction' . ? 6
WEIS 'data scaling' . ? 7
PROTEIN 'data scaling' . ? 8
#
_cell.entry_id 1M7D
_cell.length_a 71.000
_cell.length_b 71.000
_cell.length_c 198.000
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
_cell.length_a_esd ?
_cell.length_b_esd ?
_cell.length_c_esd ?
_cell.angle_alpha_esd ?
_cell.angle_beta_esd ?
_cell.angle_gamma_esd ?
#
_symmetry.entry_id 1M7D
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
_symmetry.space_group_name_Hall ?
#
_exptl.entry_id 1M7D
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 1
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.64
_exptl_crystal.density_percent_sol 53.38
_exptl_crystal.description ?
_exptl_crystal.F_000 ?
_exptl_crystal.preparation ?
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method 'VAPOR DIFFUSION'
_exptl_crystal_grow.temp 277
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 6.5
_exptl_crystal_grow.pdbx_details 'MPD, potassium phoshate, , pH 6.5, VAPOR DIFFUSION, temperature 277K'
_exptl_crystal_grow.pdbx_pH_range ?
#
_diffrn.id 1
_diffrn.ambient_temp 281
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector DIFFRACTOMETER
_diffrn_detector.type WEISSENBERG
_diffrn_detector.pdbx_collection_date 1990-06-02
_diffrn_detector.details ?
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.0
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-6A'
_diffrn_source.pdbx_synchrotron_site 'Photon Factory'
_diffrn_source.pdbx_synchrotron_beamline BL-6A
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list 1.0
#
_reflns.entry_id 1M7D
_reflns.observed_criterion_sigma_I 1.50
_reflns.observed_criterion_sigma_F 0.00
_reflns.d_resolution_low 20.00
_reflns.d_resolution_high 2.30
_reflns.number_obs 17923
_reflns.number_all ?
_reflns.percent_possible_obs 76.7
_reflns.pdbx_Rmerge_I_obs 0.073
_reflns.pdbx_Rsym_value 0.06
_reflns.pdbx_netI_over_sigmaI 7.5
_reflns.B_iso_Wilson_estimate 23.7
_reflns.pdbx_redundancy 5.0
_reflns.R_free_details ?
_reflns.limit_h_max ?
_reflns.limit_h_min ?
_reflns.limit_k_max ?
_reflns.limit_k_min ?
_reflns.limit_l_max ?
_reflns.limit_l_min ?
_reflns.observed_criterion_F_max ?
_reflns.observed_criterion_F_min ?
_reflns.pdbx_chi_squared ?
_reflns.pdbx_scaling_rejects ?
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
#
_reflns_shell.d_res_high 2.30
_reflns_shell.d_res_low 2.44
_reflns_shell.percent_possible_all 51.3
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value ?
_reflns_shell.meanI_over_sigI_obs ?
_reflns_shell.pdbx_redundancy ?
_reflns_shell.percent_possible_obs ?
_reflns_shell.number_unique_all 112
_reflns_shell.number_measured_all ?
_reflns_shell.number_measured_obs ?
_reflns_shell.number_unique_obs ?
_reflns_shell.pdbx_chi_squared ?
_reflns_shell.pdbx_diffrn_id ?
_reflns_shell.pdbx_ordinal 1
#
_refine.entry_id 1M7D
_refine.ls_number_reflns_obs 17923
_refine.ls_number_reflns_all 17923
_refine.pdbx_ls_sigma_I 1.5
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF 76031.28
_refine.pdbx_data_cutoff_low_absF 0.000000
_refine.ls_d_res_low 19.98
_refine.ls_d_res_high 2.30
_refine.ls_percent_reflns_obs 76.6
_refine.ls_R_factor_obs ?
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.216
_refine.ls_R_factor_R_free 0.279
_refine.ls_R_factor_R_free_error 0.009
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.8
_refine.ls_number_reflns_R_free 869
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 40.2
_refine.aniso_B[1][1] 4.59
_refine.aniso_B[2][2] 4.59
_refine.aniso_B[3][3] -9.18
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'FLAT MODEL'
_refine.solvent_model_param_ksol 0.348726
_refine.solvent_model_param_bsol 39.674
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'Author states residues 127-135 of chain B is part of a disordered segment.'
_refine.pdbx_starting_model 'PDB ENTRY 1MCP'
_refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT'
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.pdbx_stereochemistry_target_values 'Engh & Huber'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_B ?
_refine.ls_redundancy_reflns_obs ?
_refine.B_iso_min ?
_refine.B_iso_max ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.overall_SU_R_free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_data_cutoff_high_rms_absF 76031.28
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.pdbx_overall_phase_error ?
_refine.ls_wR_factor_R_free ?
_refine.ls_wR_factor_R_work ?
_refine.overall_FOM_free_R_set ?
_refine.overall_FOM_work_R_set ?
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.entry_id 1M7D
_refine_analyze.Luzzati_coordinate_error_obs 0.29
_refine_analyze.Luzzati_sigma_a_obs 0.32
_refine_analyze.Luzzati_d_res_low_obs 5.0
_refine_analyze.Luzzati_coordinate_error_free 0.37
_refine_analyze.Luzzati_sigma_a_free 0.37
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
_refine_analyze.pdbx_Luzzati_d_res_high_obs ?
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 3322
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 35
_refine_hist.number_atoms_solvent 121
_refine_hist.number_atoms_total 3478
_refine_hist.d_res_high 2.30
_refine_hist.d_res_low 19.98
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d 26.7 ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d 0.92 ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_total_number_of_bins_used 6
_refine_ls_shell.d_res_high 2.30
_refine_ls_shell.d_res_low 2.44
_refine_ls_shell.number_reflns_R_work 1844
_refine_ls_shell.R_factor_R_work 0.285
_refine_ls_shell.percent_reflns_obs 51.3
_refine_ls_shell.R_factor_R_free 0.327
_refine_ls_shell.R_factor_R_free_error 0.031
_refine_ls_shell.percent_reflns_R_free 5.8
_refine_ls_shell.number_reflns_R_free 114
_refine_ls_shell.number_reflns_obs ?
_refine_ls_shell.redundancy_reflns_obs ?
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.R_factor_all ?
#
loop_
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
_pdbx_xplor_file.pdbx_refine_id
1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION'
2 WATER_REP.PARAM WATER_REP.TOP 'X-RAY DIFFRACTION'
3 PARAM1NKV.CHO TOPH1NKV.CHO 'X-RAY DIFFRACTION'
#
_database_PDB_matrix.entry_id 1M7D
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1M7D
_struct.title
'Crystal structure of a Monoclonal Fab Specific for Shigella flexneri Y Lipopolysaccharide complexed with a trisaccharide'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1M7D
_struct_keywords.pdbx_keywords 'IMMUNE SYSTEM'
_struct_keywords.text 'Fab-carbohydrate interactions, Shigella O-antigen, anti-carbohydrate antibody, IMMUNE SYSTEM'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
E N N 4 ?
#
loop_
_struct_ref.id
_struct_ref.entity_id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_db_isoform
1 1 PDB 1M7D 1M7D ? ? ?
2 2 PDB 1M7D 1M7D ? ? ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1M7D A 1 ? 215 ? 1M7D 1 ? 211 ? 1 211
2 2 1M7D B 1 ? 220 ? 1M7D 1 ? 213 ? 1 213
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PISA
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
loop_
_pdbx_struct_assembly_prop.biol_id
_pdbx_struct_assembly_prop.type
_pdbx_struct_assembly_prop.value
_pdbx_struct_assembly_prop.details
1 'ABSA (A^2)' 4650 ?
1 MORE -7 ?
1 'SSA (A^2)' 19390 ?
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
_struct_biol.details ?
_struct_biol.pdbx_parent_biol_id ?
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 GLU A 84 ? LEU A 88 ? GLU A 79 LEU A 83 5 ? 5
HELX_P HELX_P2 2 SER A 125 ? SER A 131 ? SER A 121 SER A 127 5 ? 7
HELX_P HELX_P3 3 LYS A 187 ? ARG A 192 ? LYS A 183 ARG A 188 1 ? 6
HELX_P HELX_P4 4 THR B 28 ? TYR B 32 ? THR B 28 TYR B 32 5 ? 5
HELX_P HELX_P5 5 LEU B 53 A ASN B 57 ? LEU B 52 ASN B 54 5 ? 5
HELX_P HELX_P6 6 ARG B 89 ? THR B 93 ? ARG B 83 THR B 87 5 ? 5
HELX_P HELX_P7 7 TYR B 163 ? ALA B 165 ? TYR B 156 ALA B 158 5 ? 3
HELX_P HELX_P8 8 PRO B 207 ? LYS B 210 ? PRO B 200 LYS B 203 5 ? 4
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 93 SG ? ? A CYS 23 A CYS 88 1_555 ? ? ? ? ? ? ? 2.023 ? ?
disulf2 disulf ? ? A CYS 138 SG ? ? ? 1_555 A CYS 198 SG ? ? A CYS 134 A CYS 194 1_555 ? ? ? ? ? ? ? 2.036 ? ?
disulf3 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 22 B CYS 92 1_555 ? ? ? ? ? ? ? 2.440 ? ?
disulf4 disulf ? ? B CYS 147 SG ? ? ? 1_555 B CYS 202 SG ? ? B CYS 140 B CYS 195 1_555 ? ? ? ? ? ? ? 2.024 ? ?
covale1 covale both ? C MAG . O3 ? ? ? 1_555 C RAE . C1 ? ? C MAG 1 C RAE 2 1_555 ? ? ? ? ? ? ? 1.431 ? ?
covale2 covale both ? C RAE . O3 ? ? ? 1_555 C RAM . C1 ? ? C RAE 2 C RAM 3 1_555 ? ? ? ? ? ? ? 1.449 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
disulf ? ?
covale ? ?
#
loop_
_pdbx_modification_feature.ordinal
_pdbx_modification_feature.label_comp_id
_pdbx_modification_feature.label_asym_id
_pdbx_modification_feature.label_seq_id
_pdbx_modification_feature.label_alt_id
_pdbx_modification_feature.modified_residue_label_comp_id
_pdbx_modification_feature.modified_residue_label_asym_id
_pdbx_modification_feature.modified_residue_label_seq_id
_pdbx_modification_feature.modified_residue_label_alt_id
_pdbx_modification_feature.auth_comp_id
_pdbx_modification_feature.auth_asym_id
_pdbx_modification_feature.auth_seq_id
_pdbx_modification_feature.PDB_ins_code
_pdbx_modification_feature.symmetry
_pdbx_modification_feature.modified_residue_auth_comp_id
_pdbx_modification_feature.modified_residue_auth_asym_id
_pdbx_modification_feature.modified_residue_auth_seq_id
_pdbx_modification_feature.modified_residue_PDB_ins_code
_pdbx_modification_feature.modified_residue_symmetry
_pdbx_modification_feature.comp_id_linking_atom
_pdbx_modification_feature.modified_residue_id_linking_atom
_pdbx_modification_feature.modified_residue_id
_pdbx_modification_feature.ref_pcm_id
_pdbx_modification_feature.ref_comp_id
_pdbx_modification_feature.type
_pdbx_modification_feature.category
1 CYS A 23 ? CYS A 93 ? CYS A 23 ? 1_555 CYS A 88 ? 1_555 SG SG . . . None 'Disulfide bridge'
2 CYS A 138 ? CYS A 198 ? CYS A 134 ? 1_555 CYS A 194 ? 1_555 SG SG . . . None 'Disulfide bridge'
3 CYS B 22 ? CYS B 98 ? CYS B 22 ? 1_555 CYS B 92 ? 1_555 SG SG . . . None 'Disulfide bridge'
4 CYS B 147 ? CYS B 202 ? CYS B 140 ? 1_555 CYS B 195 ? 1_555 SG SG . . . None 'Disulfide bridge'
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 THR 7 A . ? THR 7 A PRO 8 A ? PRO 8 A 1 0.04
2 TYR 144 A . ? TYR 140 A PRO 145 A ? PRO 141 A 1 0.16
3 PHE 153 B . ? PHE 146 B PRO 154 B ? PRO 147 B 1 -0.12
4 GLU 155 B . ? GLU 148 B PRO 156 B ? PRO 149 B 1 -0.07
5 TRP 195 B . ? TRP 188 B PRO 196 B ? PRO 189 B 1 -0.12
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
A ? 4 ?
B ? 8 ?
C ? 4 ?
D ? 4 ?
E ? 4 ?
F ? 8 ?
G ? 6 ?
H ? 3 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? anti-parallel
A 2 3 ? anti-parallel
A 3 4 ? anti-parallel
B 1 2 ? parallel
B 2 3 ? anti-parallel
B 3 4 ? anti-parallel
B 4 5 ? anti-parallel
B 5 6 ? anti-parallel
B 6 7 ? anti-parallel
B 7 8 ? anti-parallel
C 1 2 ? anti-parallel
C 2 3 ? anti-parallel
C 3 4 ? anti-parallel
D 1 2 ? anti-parallel
D 2 3 ? anti-parallel
D 3 4 ? anti-parallel
E 1 2 ? anti-parallel
E 2 3 ? anti-parallel
E 3 4 ? anti-parallel
F 1 2 ? parallel
F 2 3 ? anti-parallel
F 3 4 ? anti-parallel
F 4 5 ? anti-parallel
F 5 6 ? anti-parallel
F 6 7 ? anti-parallel
F 7 8 ? anti-parallel
G 1 2 ? anti-parallel
G 2 3 ? anti-parallel
G 3 4 ? anti-parallel
G 4 5 ? anti-parallel
G 5 6 ? anti-parallel
H 1 2 ? anti-parallel
H 2 3 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 LEU A 4 ? THR A 7 ? LEU A 4 THR A 7
A 2 ALA A 19 ? SER A 25 ? ALA A 19 SER A 25
A 3 ASP A 75 ? ILE A 80 ? ASP A 70 ILE A 75
A 4 PHE A 67 ? SER A 72 ? PHE A 62 SER A 67
B 1 SER A 10 ? ARG A 14 ? SER A 10 ARG A 14
B 2 THR A 106 ? LYS A 111 ? THR A 102 LYS A 107
B 3 GLY A 89 ? GLN A 95 ? GLY A 84 GLN A 90
B 4 THR A 101 ? PHE A 102 ? THR A 97 PHE A 98
B 5 GLY A 89 ? GLN A 95 ? GLY A 84 GLN A 90
B 6 LEU A 38 ? GLN A 43 ? LEU A 33 GLN A 38
B 7 LYS A 50 ? TYR A 54 ? LYS A 45 TYR A 49
B 8 ASN A 58 ? ARG A 59 ? ASN A 53 ARG A 54
C 1 THR A 118 ? PHE A 122 ? THR A 114 PHE A 118
C 2 GLY A 133 ? PHE A 143 ? GLY A 129 PHE A 139
C 3 TYR A 177 ? THR A 186 ? TYR A 173 THR A 182
C 4 VAL A 163 ? TRP A 167 ? VAL A 159 TRP A 163
D 1 SER A 157 ? ARG A 159 ? SER A 153 ARG A 155
D 2 ASN A 149 ? ILE A 154 ? ASN A 145 ILE A 150
D 3 SER A 195 ? THR A 201 ? SER A 191 THR A 197
D 4 ILE A 209 ? ASN A 214 ? ILE A 205 ASN A 210
E 1 LYS B 3 ? SER B 7 ? LYS B 3 SER B 7
E 2 MET B 18 ? SER B 25 ? MET B 18 SER B 25
E 3 SER B 80 ? MET B 85 ? SER B 77 MET B 82
E 4 PHE B 70 ? ASP B 75 ? PHE B 67 ASP B 72
F 1 GLY B 10 ? VAL B 12 ? GLY B 10 VAL B 12
F 2 THR B 114 ? VAL B 118 ? THR B 107 VAL B 111
F 3 GLY B 94 ? GLY B 101 ? GLY B 88 GLY B 95
F 4 MET B 107 A TRP B 110 ? MET B 100 TRP B 103
F 5 GLY B 94 ? GLY B 101 ? GLY B 88 GLY B 95
F 6 TRP B 33 ? SER B 40 ? TRP B 33 SER B 40
F 7 GLY B 44 ? ILE B 51 ? GLY B 44 ILE B 51
F 8 THR B 60 ? TYR B 62 ? THR B 57 TYR B 59
G 1 VAL B 170 ? THR B 172 ? VAL B 163 THR B 165
G 2 PHE B 181 ? VAL B 190 ? PHE B 174 VAL B 183
G 3 VAL B 176 ? GLN B 178 ? VAL B 169 GLN B 171
G 4 PHE B 181 ? VAL B 190 ? PHE B 174 VAL B 183
G 5 VAL B 143 ? TYR B 152 ? VAL B 136 TYR B 145
G 6 SER B 127 ? LEU B 131 ? SER B 120 LEU B 124
H 1 THR B 158 ? TRP B 161 ? THR B 151 TRP B 154
H 2 CYS B 202 ? HIS B 206 ? CYS B 195 HIS B 199
H 3 VAL B 211 ? LYS B 215 ? VAL B 204 LYS B 208
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O THR A 7 ? O THR A 7 N SER A 22 ? N SER A 22
A 2 3 N CYS A 23 ? N CYS A 23 O PHE A 76 ? O PHE A 71
A 3 4 N LYS A 79 ? N LYS A 74 O SER A 68 ? O SER A 63
B 1 2 N LEU A 11 ? N LEU A 11 O LYS A 107 ? O LYS A 103
B 2 3 N LEU A 108 ? N LEU A 104 O GLY A 89 ? O GLY A 84
B 3 4 N GLN A 95 ? N GLN A 90 O THR A 101 ? O THR A 97
B 4 5 O THR A 101 ? O THR A 97 N GLN A 95 ? N GLN A 90
B 5 6 O SER A 94 ? O SER A 89 N HIS A 39 ? N HIS A 34
B 6 7 N LEU A 42 ? N LEU A 37 O LYS A 50 ? O LYS A 45
B 7 8 N TYR A 54 ? N TYR A 49 O ASN A 58 ? O ASN A 53
C 1 2 N PHE A 122 ? N PHE A 118 O VAL A 137 ? O VAL A 133
C 2 3 O PHE A 143 ? O PHE A 139 N TYR A 177 ? N TYR A 173
C 3 4 N THR A 182 ? N THR A 178 O LEU A 164 ? O LEU A 160
D 1 2 N ARG A 159 ? N ARG A 155 O TRP A 152 ? O TRP A 148
D 2 3 N LYS A 153 ? N LYS A 149 O THR A 197 ? O THR A 193
D 3 4 O ALA A 200 ? O ALA A 196 N ILE A 209 ? N ILE A 205
E 1 2 O SER B 7 ? O SER B 7 N SER B 21 ? N SER B 21
E 2 3 O CYS B 22 ? O CYS B 22 N VAL B 81 ? N VAL B 78
E 3 4 N GLN B 84 ? N GLN B 81 O THR B 71 ? O THR B 68
F 1 2 N GLY B 10 ? N GLY B 10 O SER B 115 ? O SER B 108
F 2 3 O VAL B 116 ? O VAL B 109 N GLY B 94 ? N GLY B 88
F 3 4 O ARG B 100 ? O ARG B 94 N ASP B 108 ? N ASP B 101
F 4 5 O TYR B 109 ? O TYR B 102 N ARG B 100 ? N ARG B 94
F 5 6 N GLY B 101 ? N GLY B 95 O TRP B 33 ? O TRP B 33
F 6 7 O SER B 40 ? O SER B 40 N GLY B 44 ? N GLY B 44
F 7 8 O GLU B 50 ? O GLU B 50 N HIS B 61 ? N HIS B 58
G 1 2 N ARG B 171 ? N ARG B 164 O LEU B 187 ? O LEU B 180
G 2 3 O SER B 183 ? O SER B 176 N VAL B 176 ? N VAL B 169
G 3 4 N GLN B 178 ? N GLN B 171 O PHE B 181 ? O PHE B 174
G 4 5 O VAL B 190 ? O VAL B 183 N VAL B 143 ? N VAL B 136
G 5 6 O LYS B 150 ? O LYS B 143 N SER B 127 ? N SER B 120
H 1 2 O LYS B 160 ? O LYS B 153 N ASN B 203 ? N ASN B 196
H 2 3 N HIS B 206 ? N HIS B 199 O VAL B 211 ? O VAL B 204
#
_pdbx_entry_details.entry_id 1M7D
_pdbx_entry_details.compound_details ?
_pdbx_entry_details.source_details ?
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
_pdbx_entry_details.has_protein_modification Y
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O B PRO 14 ? ? N B GLY 15 ? ? 1.32
2 1 CA B PRO 14 ? ? N B GLY 15 ? ? 1.35
3 1 C B PRO 14 ? ? CA B GLY 15 ? ? 1.35
4 1 O B PRO 126 ? ? CA B GLY 127 ? ? 1.35
5 1 CA B PRO 126 ? ? N B GLY 127 ? ? 1.45
6 1 C B PRO 126 ? ? N B CYS 128 ? ? 1.65
7 1 O B PRO 126 ? ? C B GLY 127 ? ? 1.72
8 1 O B PRO 126 ? ? N B CYS 128 ? ? 1.73
9 1 O B VAL 125 ? ? N B GLY 127 ? ? 2.12
10 1 O B SER 134 ? ? CG2 B THR 182 ? ? 2.19
#
loop_
_pdbx_validate_rmsd_bond.id
_pdbx_validate_rmsd_bond.PDB_model_num
_pdbx_validate_rmsd_bond.auth_atom_id_1
_pdbx_validate_rmsd_bond.auth_asym_id_1
_pdbx_validate_rmsd_bond.auth_comp_id_1
_pdbx_validate_rmsd_bond.auth_seq_id_1
_pdbx_validate_rmsd_bond.PDB_ins_code_1
_pdbx_validate_rmsd_bond.label_alt_id_1
_pdbx_validate_rmsd_bond.auth_atom_id_2
_pdbx_validate_rmsd_bond.auth_asym_id_2
_pdbx_validate_rmsd_bond.auth_comp_id_2
_pdbx_validate_rmsd_bond.auth_seq_id_2
_pdbx_validate_rmsd_bond.PDB_ins_code_2
_pdbx_validate_rmsd_bond.label_alt_id_2
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_rmsd_bond.bond_target_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_standard_deviation
_pdbx_validate_rmsd_bond.linker_flag
1 1 C B GLN 13 ? ? N B PRO 14 ? ? 1.207 1.338 -0.131 0.019 Y
2 1 C B PRO 14 ? ? N B GLY 15 ? ? 0.186 1.336 -1.150 0.023 Y
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 CA A CYS 134 ? ? CB A CYS 134 ? ? SG A CYS 134 ? ? 121.07 114.20 6.87 1.10 N
2 1 CA B GLN 13 ? ? C B GLN 13 ? ? N B PRO 14 ? ? 134.44 117.10 17.34 2.80 Y
3 1 O B GLN 13 ? ? C B GLN 13 ? ? N B PRO 14 ? ? 104.34 121.10 -16.76 1.90 Y
4 1 C B GLN 13 ? ? N B PRO 14 ? ? CA B PRO 14 ? ? 129.34 119.30 10.04 1.50 Y
5 1 CA B PRO 14 ? ? C B PRO 14 ? ? N B GLY 15 ? ? 13.01 116.20 -103.19 2.00 Y
6 1 C B PRO 14 ? ? N B GLY 15 ? ? CA B GLY 15 ? ? 54.01 122.30 -68.29 2.10 Y
#
loop_
_pdbx_validate_torsion.id
_pdbx_validate_torsion.PDB_model_num
_pdbx_validate_torsion.auth_comp_id
_pdbx_validate_torsion.auth_asym_id
_pdbx_validate_torsion.auth_seq_id
_pdbx_validate_torsion.PDB_ins_code
_pdbx_validate_torsion.label_alt_id
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
1 1 VAL A 51 ? ? 71.72 -48.94
2 1 SER A 67 ? ? -167.69 91.99
3 1 ALA A 80 ? ? -29.11 -57.26
4 1 HIS A 93 ? ? -115.18 -160.26
5 1 TYR A 140 ? ? -173.47 137.62
6 1 PRO A 141 ? ? -58.69 -179.33
7 1 LYS A 169 ? ? -79.36 -75.15
8 1 THR A 200 ? ? -66.73 17.91
9 1 PRO B 14 ? ? -74.64 21.88
10 1 MET B 18 ? ? -170.14 144.05
11 1 THR B 28 ? ? -66.56 90.02
12 1 ARG B 52 ? ? -84.37 -149.65
13 1 CYS B 128 ? ? 0.97 95.77
14 1 THR B 131 ? ? -60.34 94.45
15 1 SER B 132 ? ? -148.59 56.07
16 1 SER B 185 ? ? -55.72 2.92
17 1 THR B 187 ? ? -69.34 21.53
#
_pdbx_validate_peptide_omega.id 1
_pdbx_validate_peptide_omega.PDB_model_num 1
_pdbx_validate_peptide_omega.auth_comp_id_1 PRO
_pdbx_validate_peptide_omega.auth_asym_id_1 B
_pdbx_validate_peptide_omega.auth_seq_id_1 14
_pdbx_validate_peptide_omega.PDB_ins_code_1 ?
_pdbx_validate_peptide_omega.label_alt_id_1 ?
_pdbx_validate_peptide_omega.auth_comp_id_2 GLY
_pdbx_validate_peptide_omega.auth_asym_id_2 B
_pdbx_validate_peptide_omega.auth_seq_id_2 15
_pdbx_validate_peptide_omega.PDB_ins_code_2 ?
_pdbx_validate_peptide_omega.label_alt_id_2 ?
_pdbx_validate_peptide_omega.omega 71.11
#
_pdbx_validate_main_chain_plane.id 1
_pdbx_validate_main_chain_plane.PDB_model_num 1
_pdbx_validate_main_chain_plane.auth_comp_id PRO
_pdbx_validate_main_chain_plane.auth_asym_id B
_pdbx_validate_main_chain_plane.auth_seq_id 14
_pdbx_validate_main_chain_plane.PDB_ins_code ?
_pdbx_validate_main_chain_plane.label_alt_id ?
_pdbx_validate_main_chain_plane.improper_torsion_angle 116.75
#
loop_
_pdbx_validate_polymer_linkage.id
_pdbx_validate_polymer_linkage.PDB_model_num
_pdbx_validate_polymer_linkage.auth_atom_id_1
_pdbx_validate_polymer_linkage.auth_asym_id_1
_pdbx_validate_polymer_linkage.auth_comp_id_1
_pdbx_validate_polymer_linkage.auth_seq_id_1
_pdbx_validate_polymer_linkage.PDB_ins_code_1
_pdbx_validate_polymer_linkage.label_alt_id_1
_pdbx_validate_polymer_linkage.auth_atom_id_2
_pdbx_validate_polymer_linkage.auth_asym_id_2
_pdbx_validate_polymer_linkage.auth_comp_id_2
_pdbx_validate_polymer_linkage.auth_seq_id_2
_pdbx_validate_polymer_linkage.PDB_ins_code_2
_pdbx_validate_polymer_linkage.label_alt_id_2
_pdbx_validate_polymer_linkage.dist
1 1 C B PRO 14 ? ? N B GLY 15 ? ? 0.19
2 1 C B PRO 126 ? ? N B GLY 127 ? ? 2.19
3 1 C B SER 134 ? ? N B SER 135 ? ? 2.32
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id B
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 229
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id E
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
_pdbx_database_remark.id 999
_pdbx_database_remark.text
;SEQUENCE
At the time of processing, this sequence of chain A and chain B have not yet been deposited in a sequence database.
;
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CYS N N N N 74
CYS CA C N R 75
CYS C C N N 76
CYS O O N N 77
CYS CB C N N 78
CYS SG S N N 79
CYS OXT O N N 80
CYS H H N N 81
CYS H2 H N N 82
CYS HA H N N 83
CYS HB2 H N N 84
CYS HB3 H N N 85
CYS HG H N N 86
CYS HXT H N N 87
GLN N N N N 88
GLN CA C N S 89
GLN C C N N 90
GLN O O N N 91
GLN CB C N N 92
GLN CG C N N 93
GLN CD C N N 94
GLN OE1 O N N 95
GLN NE2 N N N 96
GLN OXT O N N 97
GLN H H N N 98
GLN H2 H N N 99
GLN HA H N N 100
GLN HB2 H N N 101
GLN HB3 H N N 102
GLN HG2 H N N 103
GLN HG3 H N N 104
GLN HE21 H N N 105
GLN HE22 H N N 106
GLN HXT H N N 107
GLU N N N N 108
GLU CA C N S 109
GLU C C N N 110
GLU O O N N 111
GLU CB C N N 112
GLU CG C N N 113
GLU CD C N N 114
GLU OE1 O N N 115
GLU OE2 O N N 116
GLU OXT O N N 117
GLU H H N N 118
GLU H2 H N N 119
GLU HA H N N 120
GLU HB2 H N N 121
GLU HB3 H N N 122
GLU HG2 H N N 123
GLU HG3 H N N 124
GLU HE2 H N N 125
GLU HXT H N N 126
GLY N N N N 127
GLY CA C N N 128
GLY C C N N 129
GLY O O N N 130
GLY OXT O N N 131
GLY H H N N 132
GLY H2 H N N 133
GLY HA2 H N N 134
GLY HA3 H N N 135
GLY HXT H N N 136
HIS N N N N 137
HIS CA C N S 138
HIS C C N N 139
HIS O O N N 140
HIS CB C N N 141
HIS CG C Y N 142
HIS ND1 N Y N 143
HIS CD2 C Y N 144
HIS CE1 C Y N 145
HIS NE2 N Y N 146
HIS OXT O N N 147
HIS H H N N 148
HIS H2 H N N 149
HIS HA H N N 150
HIS HB2 H N N 151
HIS HB3 H N N 152
HIS HD1 H N N 153
HIS HD2 H N N 154
HIS HE1 H N N 155
HIS HE2 H N N 156
HIS HXT H N N 157
HOH O O N N 158
HOH H1 H N N 159
HOH H2 H N N 160
ILE N N N N 161
ILE CA C N S 162
ILE C C N N 163
ILE O O N N 164
ILE CB C N S 165
ILE CG1 C N N 166
ILE CG2 C N N 167
ILE CD1 C N N 168
ILE OXT O N N 169
ILE H H N N 170
ILE H2 H N N 171
ILE HA H N N 172
ILE HB H N N 173
ILE HG12 H N N 174
ILE HG13 H N N 175
ILE HG21 H N N 176
ILE HG22 H N N 177
ILE HG23 H N N 178
ILE HD11 H N N 179
ILE HD12 H N N 180
ILE HD13 H N N 181
ILE HXT H N N 182
LEU N N N N 183
LEU CA C N S 184
LEU C C N N 185
LEU O O N N 186
LEU CB C N N 187
LEU CG C N N 188
LEU CD1 C N N 189
LEU CD2 C N N 190
LEU OXT O N N 191
LEU H H N N 192
LEU H2 H N N 193
LEU HA H N N 194
LEU HB2 H N N 195
LEU HB3 H N N 196
LEU HG H N N 197
LEU HD11 H N N 198
LEU HD12 H N N 199
LEU HD13 H N N 200
LEU HD21 H N N 201
LEU HD22 H N N 202
LEU HD23 H N N 203
LEU HXT H N N 204
LYS N N N N 205
LYS CA C N S 206
LYS C C N N 207
LYS O O N N 208
LYS CB C N N 209
LYS CG C N N 210
LYS CD C N N 211
LYS CE C N N 212
LYS NZ N N N 213
LYS OXT O N N 214
LYS H H N N 215
LYS H2 H N N 216
LYS HA H N N 217
LYS HB2 H N N 218
LYS HB3 H N N 219
LYS HG2 H N N 220
LYS HG3 H N N 221
LYS HD2 H N N 222
LYS HD3 H N N 223
LYS HE2 H N N 224
LYS HE3 H N N 225
LYS HZ1 H N N 226
LYS HZ2 H N N 227
LYS HZ3 H N N 228
LYS HXT H N N 229
MAG C1 C N R 230
MAG C2 C N R 231
MAG C3 C N R 232
MAG C4 C N S 233
MAG C5 C N R 234
MAG C6 C N N 235
MAG C7 C N N 236
MAG C8 C N N 237
MAG N2 N N N 238
MAG O1 O N N 239
MAG O3 O N N 240
MAG O4 O N N 241
MAG O5 O N N 242
MAG O6 O N N 243
MAG O7 O N N 244
MAG CM C N N 245
MAG H1 H N N 246
MAG H2 H N N 247
MAG H3 H N N 248
MAG H4 H N N 249
MAG H5 H N N 250
MAG H61 H N N 251
MAG H62 H N N 252
MAG H81 H N N 253
MAG H82 H N N 254
MAG H83 H N N 255
MAG HN2 H N N 256
MAG HO3 H N N 257
MAG HO4 H N N 258
MAG HO6 H N N 259
MAG HM1 H N N 260
MAG HM2 H N N 261
MAG HM3 H N N 262
MET N N N N 263
MET CA C N S 264
MET C C N N 265
MET O O N N 266
MET CB C N N 267
MET CG C N N 268
MET SD S N N 269
MET CE C N N 270
MET OXT O N N 271
MET H H N N 272
MET H2 H N N 273
MET HA H N N 274
MET HB2 H N N 275
MET HB3 H N N 276
MET HG2 H N N 277
MET HG3 H N N 278
MET HE1 H N N 279
MET HE2 H N N 280
MET HE3 H N N 281
MET HXT H N N 282
PHE N N N N 283
PHE CA C N S 284
PHE C C N N 285
PHE O O N N 286
PHE CB C N N 287
PHE CG C Y N 288
PHE CD1 C Y N 289
PHE CD2 C Y N 290
PHE CE1 C Y N 291
PHE CE2 C Y N 292
PHE CZ C Y N 293
PHE OXT O N N 294
PHE H H N N 295
PHE H2 H N N 296
PHE HA H N N 297
PHE HB2 H N N 298
PHE HB3 H N N 299
PHE HD1 H N N 300
PHE HD2 H N N 301
PHE HE1 H N N 302
PHE HE2 H N N 303
PHE HZ H N N 304
PHE HXT H N N 305
PRO N N N N 306
PRO CA C N S 307
PRO C C N N 308
PRO O O N N 309
PRO CB C N N 310
PRO CG C N N 311
PRO CD C N N 312
PRO OXT O N N 313
PRO H H N N 314
PRO HA H N N 315
PRO HB2 H N N 316
PRO HB3 H N N 317
PRO HG2 H N N 318
PRO HG3 H N N 319
PRO HD2 H N N 320
PRO HD3 H N N 321
PRO HXT H N N 322
RAE C1 C N R 323
RAE C2 C N N 324
RAE C3 C N S 325
RAE O3 O N N 326
RAE C4 C N R 327
RAE O4 O N N 328
RAE C5 C N S 329
RAE O5 O N N 330
RAE C6 C N N 331
RAE O1 O N N 332
RAE H1 H N N 333
RAE H21 H N N 334
RAE H22 H N N 335
RAE H3 H N N 336
RAE HO3 H N N 337
RAE H4 H N N 338
RAE HO4 H N N 339
RAE H5 H N N 340
RAE H61 H N N 341
RAE H62 H N N 342
RAE H63 H N N 343
RAE HO1 H N N 344
RAM C1 C N R 345
RAM C2 C N R 346
RAM C3 C N R 347
RAM C4 C N R 348
RAM C5 C N S 349
RAM C6 C N N 350
RAM O1 O N N 351
RAM O2 O N N 352
RAM O3 O N N 353
RAM O4 O N N 354
RAM O5 O N N 355
RAM H1 H N N 356
RAM H2 H N N 357
RAM H3 H N N 358
RAM H4 H N N 359
RAM H5 H N N 360
RAM H61 H N N 361
RAM H62 H N N 362
RAM H63 H N N 363
RAM HO1 H N N 364
RAM HO2 H N N 365
RAM HO3 H N N 366
RAM HO4 H N N 367
SER N N N N 368
SER CA C N S 369
SER C C N N 370
SER O O N N 371
SER CB C N N 372
SER OG O N N 373
SER OXT O N N 374
SER H H N N 375
SER H2 H N N 376
SER HA H N N 377
SER HB2 H N N 378
SER HB3 H N N 379
SER HG H N N 380
SER HXT H N N 381
THR N N N N 382
THR CA C N S 383
THR C C N N 384
THR O O N N 385
THR CB C N R 386
THR OG1 O N N 387
THR CG2 C N N 388
THR OXT O N N 389
THR H H N N 390
THR H2 H N N 391
THR HA H N N 392
THR HB H N N 393
THR HG1 H N N 394
THR HG21 H N N 395
THR HG22 H N N 396
THR HG23 H N N 397
THR HXT H N N 398
TRP N N N N 399
TRP CA C N S 400
TRP C C N N 401
TRP O O N N 402
TRP CB C N N 403
TRP CG C Y N 404
TRP CD1 C Y N 405
TRP CD2 C Y N 406
TRP NE1 N Y N 407
TRP CE2 C Y N 408
TRP CE3 C Y N 409
TRP CZ2 C Y N 410
TRP CZ3 C Y N 411
TRP CH2 C Y N 412
TRP OXT O N N 413
TRP H H N N 414
TRP H2 H N N 415
TRP HA H N N 416
TRP HB2 H N N 417
TRP HB3 H N N 418
TRP HD1 H N N 419
TRP HE1 H N N 420
TRP HE3 H N N 421
TRP HZ2 H N N 422
TRP HZ3 H N N 423
TRP HH2 H N N 424
TRP HXT H N N 425
TYR N N N N 426
TYR CA C N S 427
TYR C C N N 428
TYR O O N N 429
TYR CB C N N 430
TYR CG C Y N 431
TYR CD1 C Y N 432
TYR CD2 C Y N 433
TYR CE1 C Y N 434
TYR CE2 C Y N 435
TYR CZ C Y N 436
TYR OH O N N 437
TYR OXT O N N 438
TYR H H N N 439
TYR H2 H N N 440
TYR HA H N N 441
TYR HB2 H N N 442
TYR HB3 H N N 443
TYR HD1 H N N 444
TYR HD2 H N N 445
TYR HE1 H N N 446
TYR HE2 H N N 447
TYR HH H N N 448
TYR HXT H N N 449
VAL N N N N 450
VAL CA C N S 451
VAL C C N N 452
VAL O O N N 453
VAL CB C N N 454
VAL CG1 C N N 455
VAL CG2 C N N 456
VAL OXT O N N 457
VAL H H N N 458
VAL H2 H N N 459
VAL HA H N N 460
VAL HB H N N 461
VAL HG11 H N N 462
VAL HG12 H N N 463
VAL HG13 H N N 464
VAL HG21 H N N 465
VAL HG22 H N N 466
VAL HG23 H N N 467
VAL HXT H N N 468
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
CYS N CA sing N N 70
CYS N H sing N N 71
CYS N H2 sing N N 72
CYS CA C sing N N 73
CYS CA CB sing N N 74
CYS CA HA sing N N 75
CYS C O doub N N 76
CYS C OXT sing N N 77
CYS CB SG sing N N 78
CYS CB HB2 sing N N 79
CYS CB HB3 sing N N 80
CYS SG HG sing N N 81
CYS OXT HXT sing N N 82
GLN N CA sing N N 83
GLN N H sing N N 84
GLN N H2 sing N N 85
GLN CA C sing N N 86
GLN CA CB sing N N 87
GLN CA HA sing N N 88
GLN C O doub N N 89
GLN C OXT sing N N 90
GLN CB CG sing N N 91
GLN CB HB2 sing N N 92
GLN CB HB3 sing N N 93
GLN CG CD sing N N 94
GLN CG HG2 sing N N 95
GLN CG HG3 sing N N 96
GLN CD OE1 doub N N 97
GLN CD NE2 sing N N 98
GLN NE2 HE21 sing N N 99
GLN NE2 HE22 sing N N 100
GLN OXT HXT sing N N 101
GLU N CA sing N N 102
GLU N H sing N N 103
GLU N H2 sing N N 104
GLU CA C sing N N 105
GLU CA CB sing N N 106
GLU CA HA sing N N 107
GLU C O doub N N 108
GLU C OXT sing N N 109
GLU CB CG sing N N 110
GLU CB HB2 sing N N 111
GLU CB HB3 sing N N 112
GLU CG CD sing N N 113
GLU CG HG2 sing N N 114
GLU CG HG3 sing N N 115
GLU CD OE1 doub N N 116
GLU CD OE2 sing N N 117
GLU OE2 HE2 sing N N 118
GLU OXT HXT sing N N 119
GLY N CA sing N N 120
GLY N H sing N N 121
GLY N H2 sing N N 122
GLY CA C sing N N 123
GLY CA HA2 sing N N 124
GLY CA HA3 sing N N 125
GLY C O doub N N 126
GLY C OXT sing N N 127
GLY OXT HXT sing N N 128
HIS N CA sing N N 129
HIS N H sing N N 130
HIS N H2 sing N N 131
HIS CA C sing N N 132
HIS CA CB sing N N 133
HIS CA HA sing N N 134
HIS C O doub N N 135
HIS C OXT sing N N 136
HIS CB CG sing N N 137
HIS CB HB2 sing N N 138
HIS CB HB3 sing N N 139
HIS CG ND1 sing Y N 140
HIS CG CD2 doub Y N 141
HIS ND1 CE1 doub Y N 142
HIS ND1 HD1 sing N N 143
HIS CD2 NE2 sing Y N 144
HIS CD2 HD2 sing N N 145
HIS CE1 NE2 sing Y N 146
HIS CE1 HE1 sing N N 147
HIS NE2 HE2 sing N N 148
HIS OXT HXT sing N N 149
HOH O H1 sing N N 150
HOH O H2 sing N N 151
ILE N CA sing N N 152
ILE N H sing N N 153
ILE N H2 sing N N 154
ILE CA C sing N N 155
ILE CA CB sing N N 156
ILE CA HA sing N N 157
ILE C O doub N N 158
ILE C OXT sing N N 159
ILE CB CG1 sing N N 160
ILE CB CG2 sing N N 161
ILE CB HB sing N N 162
ILE CG1 CD1 sing N N 163
ILE CG1 HG12 sing N N 164
ILE CG1 HG13 sing N N 165
ILE CG2 HG21 sing N N 166
ILE CG2 HG22 sing N N 167
ILE CG2 HG23 sing N N 168
ILE CD1 HD11 sing N N 169
ILE CD1 HD12 sing N N 170
ILE CD1 HD13 sing N N 171
ILE OXT HXT sing N N 172
LEU N CA sing N N 173
LEU N H sing N N 174
LEU N H2 sing N N 175
LEU CA C sing N N 176
LEU CA CB sing N N 177
LEU CA HA sing N N 178
LEU C O doub N N 179
LEU C OXT sing N N 180
LEU CB CG sing N N 181
LEU CB HB2 sing N N 182
LEU CB HB3 sing N N 183
LEU CG CD1 sing N N 184
LEU CG CD2 sing N N 185
LEU CG HG sing N N 186
LEU CD1 HD11 sing N N 187
LEU CD1 HD12 sing N N 188
LEU CD1 HD13 sing N N 189
LEU CD2 HD21 sing N N 190
LEU CD2 HD22 sing N N 191
LEU CD2 HD23 sing N N 192
LEU OXT HXT sing N N 193
LYS N CA sing N N 194
LYS N H sing N N 195
LYS N H2 sing N N 196
LYS CA C sing N N 197
LYS CA CB sing N N 198
LYS CA HA sing N N 199
LYS C O doub N N 200
LYS C OXT sing N N 201
LYS CB CG sing N N 202
LYS CB HB2 sing N N 203
LYS CB HB3 sing N N 204
LYS CG CD sing N N 205
LYS CG HG2 sing N N 206
LYS CG HG3 sing N N 207
LYS CD CE sing N N 208
LYS CD HD2 sing N N 209
LYS CD HD3 sing N N 210
LYS CE NZ sing N N 211
LYS CE HE2 sing N N 212
LYS CE HE3 sing N N 213
LYS NZ HZ1 sing N N 214
LYS NZ HZ2 sing N N 215
LYS NZ HZ3 sing N N 216
LYS OXT HXT sing N N 217
MAG C1 C2 sing N N 218
MAG C1 O1 sing N N 219
MAG C1 O5 sing N N 220
MAG C1 H1 sing N N 221
MAG C2 C3 sing N N 222
MAG C2 N2 sing N N 223
MAG C2 H2 sing N N 224
MAG C3 C4 sing N N 225
MAG C3 O3 sing N N 226
MAG C3 H3 sing N N 227
MAG C4 C5 sing N N 228
MAG C4 O4 sing N N 229
MAG C4 H4 sing N N 230
MAG C5 C6 sing N N 231
MAG C5 O5 sing N N 232
MAG C5 H5 sing N N 233
MAG C6 O6 sing N N 234
MAG C6 H61 sing N N 235
MAG C6 H62 sing N N 236
MAG C7 C8 sing N N 237
MAG C7 N2 sing N N 238
MAG C7 O7 doub N N 239
MAG C8 H81 sing N N 240
MAG C8 H82 sing N N 241
MAG C8 H83 sing N N 242
MAG N2 HN2 sing N N 243
MAG O1 CM sing N N 244
MAG O3 HO3 sing N N 245
MAG O4 HO4 sing N N 246
MAG O6 HO6 sing N N 247
MAG CM HM1 sing N N 248
MAG CM HM2 sing N N 249
MAG CM HM3 sing N N 250
MET N CA sing N N 251
MET N H sing N N 252
MET N H2 sing N N 253
MET CA C sing N N 254
MET CA CB sing N N 255
MET CA HA sing N N 256
MET C O doub N N 257
MET C OXT sing N N 258
MET CB CG sing N N 259
MET CB HB2 sing N N 260
MET CB HB3 sing N N 261
MET CG SD sing N N 262
MET CG HG2 sing N N 263
MET CG HG3 sing N N 264
MET SD CE sing N N 265
MET CE HE1 sing N N 266
MET CE HE2 sing N N 267
MET CE HE3 sing N N 268
MET OXT HXT sing N N 269
PHE N CA sing N N 270
PHE N H sing N N 271
PHE N H2 sing N N 272
PHE CA C sing N N 273
PHE CA CB sing N N 274
PHE CA HA sing N N 275
PHE C O doub N N 276
PHE C OXT sing N N 277
PHE CB CG sing N N 278
PHE CB HB2 sing N N 279
PHE CB HB3 sing N N 280
PHE CG CD1 doub Y N 281
PHE CG CD2 sing Y N 282
PHE CD1 CE1 sing Y N 283
PHE CD1 HD1 sing N N 284
PHE CD2 CE2 doub Y N 285
PHE CD2 HD2 sing N N 286
PHE CE1 CZ doub Y N 287
PHE CE1 HE1 sing N N 288
PHE CE2 CZ sing Y N 289
PHE CE2 HE2 sing N N 290
PHE CZ HZ sing N N 291
PHE OXT HXT sing N N 292
PRO N CA sing N N 293
PRO N CD sing N N 294
PRO N H sing N N 295
PRO CA C sing N N 296
PRO CA CB sing N N 297
PRO CA HA sing N N 298
PRO C O doub N N 299
PRO C OXT sing N N 300
PRO CB CG sing N N 301
PRO CB HB2 sing N N 302
PRO CB HB3 sing N N 303
PRO CG CD sing N N 304
PRO CG HG2 sing N N 305
PRO CG HG3 sing N N 306
PRO CD HD2 sing N N 307
PRO CD HD3 sing N N 308
PRO OXT HXT sing N N 309
RAE C1 C2 sing N N 310
RAE C1 O5 sing N N 311
RAE C1 O1 sing N N 312
RAE C2 C3 sing N N 313
RAE C3 O3 sing N N 314
RAE C3 C4 sing N N 315
RAE C4 O4 sing N N 316
RAE C4 C5 sing N N 317
RAE C5 O5 sing N N 318
RAE C5 C6 sing N N 319
RAE C1 H1 sing N N 320
RAE C2 H21 sing N N 321
RAE C2 H22 sing N N 322
RAE C3 H3 sing N N 323
RAE O3 HO3 sing N N 324
RAE C4 H4 sing N N 325
RAE O4 HO4 sing N N 326
RAE C5 H5 sing N N 327
RAE C6 H61 sing N N 328
RAE C6 H62 sing N N 329
RAE C6 H63 sing N N 330
RAE O1 HO1 sing N N 331
RAM C1 C2 sing N N 332
RAM C1 O1 sing N N 333
RAM C1 O5 sing N N 334
RAM C1 H1 sing N N 335
RAM C2 C3 sing N N 336
RAM C2 O2 sing N N 337
RAM C2 H2 sing N N 338
RAM C3 C4 sing N N 339
RAM C3 O3 sing N N 340
RAM C3 H3 sing N N 341
RAM C4 C5 sing N N 342
RAM C4 O4 sing N N 343
RAM C4 H4 sing N N 344
RAM C5 C6 sing N N 345
RAM C5 O5 sing N N 346
RAM C5 H5 sing N N 347
RAM C6 H61 sing N N 348
RAM C6 H62 sing N N 349
RAM C6 H63 sing N N 350
RAM O1 HO1 sing N N 351
RAM O2 HO2 sing N N 352
RAM O3 HO3 sing N N 353
RAM O4 HO4 sing N N 354
SER N CA sing N N 355
SER N H sing N N 356
SER N H2 sing N N 357
SER CA C sing N N 358
SER CA CB sing N N 359
SER CA HA sing N N 360
SER C O doub N N 361
SER C OXT sing N N 362
SER CB OG sing N N 363
SER CB HB2 sing N N 364
SER CB HB3 sing N N 365
SER OG HG sing N N 366
SER OXT HXT sing N N 367
THR N CA sing N N 368
THR N H sing N N 369
THR N H2 sing N N 370
THR CA C sing N N 371
THR CA CB sing N N 372
THR CA HA sing N N 373
THR C O doub N N 374
THR C OXT sing N N 375
THR CB OG1 sing N N 376
THR CB CG2 sing N N 377
THR CB HB sing N N 378
THR OG1 HG1 sing N N 379
THR CG2 HG21 sing N N 380
THR CG2 HG22 sing N N 381
THR CG2 HG23 sing N N 382
THR OXT HXT sing N N 383
TRP N CA sing N N 384
TRP N H sing N N 385
TRP N H2 sing N N 386
TRP CA C sing N N 387
TRP CA CB sing N N 388
TRP CA HA sing N N 389
TRP C O doub N N 390
TRP C OXT sing N N 391
TRP CB CG sing N N 392
TRP CB HB2 sing N N 393
TRP CB HB3 sing N N 394
TRP CG CD1 doub Y N 395
TRP CG CD2 sing Y N 396
TRP CD1 NE1 sing Y N 397
TRP CD1 HD1 sing N N 398
TRP CD2 CE2 doub Y N 399
TRP CD2 CE3 sing Y N 400
TRP NE1 CE2 sing Y N 401
TRP NE1 HE1 sing N N 402
TRP CE2 CZ2 sing Y N 403
TRP CE3 CZ3 doub Y N 404
TRP CE3 HE3 sing N N 405
TRP CZ2 CH2 doub Y N 406
TRP CZ2 HZ2 sing N N 407
TRP CZ3 CH2 sing Y N 408
TRP CZ3 HZ3 sing N N 409
TRP CH2 HH2 sing N N 410
TRP OXT HXT sing N N 411
TYR N CA sing N N 412
TYR N H sing N N 413
TYR N H2 sing N N 414
TYR CA C sing N N 415
TYR CA CB sing N N 416
TYR CA HA sing N N 417
TYR C O doub N N 418
TYR C OXT sing N N 419
TYR CB CG sing N N 420
TYR CB HB2 sing N N 421
TYR CB HB3 sing N N 422
TYR CG CD1 doub Y N 423
TYR CG CD2 sing Y N 424
TYR CD1 CE1 sing Y N 425
TYR CD1 HD1 sing N N 426
TYR CD2 CE2 doub Y N 427
TYR CD2 HD2 sing N N 428
TYR CE1 CZ doub Y N 429
TYR CE1 HE1 sing N N 430
TYR CE2 CZ sing Y N 431
TYR CE2 HE2 sing N N 432
TYR CZ OH sing N N 433
TYR OH HH sing N N 434
TYR OXT HXT sing N N 435
VAL N CA sing N N 436
VAL N H sing N N 437
VAL N H2 sing N N 438
VAL CA C sing N N 439
VAL CA CB sing N N 440
VAL CA HA sing N N 441
VAL C O doub N N 442
VAL C OXT sing N N 443
VAL CB CG1 sing N N 444
VAL CB CG2 sing N N 445
VAL CB HB sing N N 446
VAL CG1 HG11 sing N N 447
VAL CG1 HG12 sing N N 448
VAL CG1 HG13 sing N N 449
VAL CG2 HG21 sing N N 450
VAL CG2 HG22 sing N N 451
VAL CG2 HG23 sing N N 452
VAL OXT HXT sing N N 453
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
3 MAG 1 n
3 RAE 2 n
3 RAM 3 n
#
_pdbx_initial_refinement_model.id 1
_pdbx_initial_refinement_model.entity_id_list ?
_pdbx_initial_refinement_model.type 'experimental model'
_pdbx_initial_refinement_model.source_name PDB
_pdbx_initial_refinement_model.accession_code 1MCP
_pdbx_initial_refinement_model.details 'PDB ENTRY 1MCP'
#
_atom_sites.entry_id 1M7D
_atom_sites.fract_transf_matrix[1][1] 0.014085
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.014085
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.005051
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_