HEADER TRANSFERASE 08-AUG-02 1MEJ TITLE HUMAN GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE DOMAIN AT PH 8.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE; COMPND 3 CHAIN: B, A, C; COMPND 4 FRAGMENT: RESIDUES 810-1010; COMPND 5 SYNONYM: GART, GAR TRANSFORMYLASE, 5'-PHOSPHORIBOSYLGLYCINAMIDE COMPND 6 TRANSFORMYLASE; COMPND 7 EC: 2.1.2.2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GART; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET23D KEYWDS PURINE BIOSYNTHESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.ZHANG,J.DESHARNAIS,S.E.GREASLEY,G.P.BEARDSLEY,D.L.BOGER,I.A.WILSON REVDAT 5 20-SEP-23 1MEJ 1 REMARK REVDAT 4 25-JAN-23 1MEJ 1 REMARK SEQADV REVDAT 3 13-JUL-11 1MEJ 1 VERSN REVDAT 2 24-FEB-09 1MEJ 1 VERSN REVDAT 1 18-DEC-02 1MEJ 0 JRNL AUTH Y.ZHANG,J.DESHARNAIS,S.E.GREASLEY,G.P.BEARDSLEY,D.L.BOGER, JRNL AUTH 2 I.A.WILSON JRNL TITL CRYSTAL STRUCTURES OF HUMAN GAR TFASE OF LOW AND HIGH PH AND JRNL TITL 2 WITH SUBSTRATE BETA-GAR JRNL REF BIOCHEMISTRY V. 41 14206 2002 JRNL REFN ISSN 0006-2960 JRNL PMID 12450384 JRNL DOI 10.1021/BI020522M REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.0 REMARK 3 NUMBER OF REFLECTIONS : 53638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 5456 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 812 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4554 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 17 REMARK 3 SOLVENT ATOMS : 448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.72000 REMARK 3 B22 (A**2) : -0.72000 REMARK 3 B33 (A**2) : 1.44000 REMARK 3 B12 (A**2) : 0.52000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.30 REMARK 3 ESD FROM SIGMAA (A) : 0.23 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CARBOHYDRATE.PARAM REMARK 3 PARAMETER FILE 3 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : GLY.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MEJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-02. REMARK 100 THE DEPOSITION ID IS D_1000016854. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9706 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53638 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 24.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.37200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1C2T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, PEG400, NACL, TRIS PH 8.5,, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 282K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 76.25500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.02584 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 64.46333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 76.25500 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 44.02584 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 64.46333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 76.25500 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 44.02584 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 64.46333 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 76.25500 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 44.02584 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 64.46333 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 76.25500 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 44.02584 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 64.46333 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 76.25500 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 44.02584 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 64.46333 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 88.05169 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 128.92667 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 88.05169 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 128.92667 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 88.05169 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 128.92667 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 88.05169 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 128.92667 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 88.05169 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 128.92667 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 88.05169 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 128.92667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B -10 REMARK 465 SER B -9 REMARK 465 MET B -8 REMARK 465 THR B -7 REMARK 465 GLY B -6 REMARK 465 GLY B -5 REMARK 465 GLN B -4 REMARK 465 GLN B -3 REMARK 465 MET B -2 REMARK 465 GLY B -1 REMARK 465 LYS B 201 REMARK 465 GLU B 202 REMARK 465 GLU B 203 REMARK 465 PRO B 204 REMARK 465 LEU B 205 REMARK 465 GLU B 206 REMARK 465 HIS B 207 REMARK 465 HIS B 208 REMARK 465 HIS B 209 REMARK 465 HIS B 210 REMARK 465 HIS B 211 REMARK 465 HIS B 212 REMARK 465 ALA A -10 REMARK 465 SER A -9 REMARK 465 MET A -8 REMARK 465 THR A -7 REMARK 465 GLY A -6 REMARK 465 GLY A -5 REMARK 465 GLN A -4 REMARK 465 GLN A -3 REMARK 465 MET A -2 REMARK 465 GLY A -1 REMARK 465 LYS A 201 REMARK 465 GLU A 202 REMARK 465 GLU A 203 REMARK 465 PRO A 204 REMARK 465 LEU A 205 REMARK 465 GLU A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 HIS A 211 REMARK 465 HIS A 212 REMARK 465 ALA C -10 REMARK 465 SER C -9 REMARK 465 MET C -8 REMARK 465 THR C -7 REMARK 465 GLY C -6 REMARK 465 GLY C -5 REMARK 465 GLN C -4 REMARK 465 GLN C -3 REMARK 465 MET C -2 REMARK 465 GLY C -1 REMARK 465 LYS C 201 REMARK 465 GLU C 202 REMARK 465 GLU C 203 REMARK 465 PRO C 204 REMARK 465 LEU C 205 REMARK 465 GLU C 206 REMARK 465 HIS C 207 REMARK 465 HIS C 208 REMARK 465 HIS C 209 REMARK 465 HIS C 210 REMARK 465 HIS C 211 REMARK 465 HIS C 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 132 -156.02 -135.50 REMARK 500 GLU B 141 -1.14 -58.28 REMARK 500 VAL B 143 37.29 -60.44 REMARK 500 ASP B 144 -2.63 -144.51 REMARK 500 MET A 89 44.37 -91.47 REMARK 500 PRO A 109 48.73 -77.67 REMARK 500 THR A 132 -156.84 -137.67 REMARK 500 ASN C 25 47.19 -93.35 REMARK 500 THR C 132 -153.62 -141.68 REMARK 500 VAL C 143 -53.63 -25.81 REMARK 500 ASP C 144 25.56 -79.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 450 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 451 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 452 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MEN RELATED DB: PDB REMARK 900 HUMAN GAR TFASE COMPLEXED WITH SUBSTRATE BETA-GAR REMARK 900 RELATED ID: 1MEO RELATED DB: PDB REMARK 900 HUMAN GAR TFASE AT PH 4.2 DBREF 1MEJ A 3 203 UNP P22102 PUR2_HUMAN 810 1010 DBREF 1MEJ B 3 203 UNP P22102 PUR2_HUMAN 810 1010 DBREF 1MEJ C 3 203 UNP P22102 PUR2_HUMAN 810 1010 SEQADV 1MEJ ALA A -10 UNP P22102 EXPRESSION TAG SEQADV 1MEJ SER A -9 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET A -8 UNP P22102 EXPRESSION TAG SEQADV 1MEJ THR A -7 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY A -6 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY A -5 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN A -4 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN A -3 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET A -2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY A -1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ARG A 0 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ILE A 1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU A 2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ PRO A 204 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU A 205 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLU A 206 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 207 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 208 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 209 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 210 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 211 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS A 212 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ALA B -10 UNP P22102 EXPRESSION TAG SEQADV 1MEJ SER B -9 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET B -8 UNP P22102 EXPRESSION TAG SEQADV 1MEJ THR B -7 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY B -6 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY B -5 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN B -4 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN B -3 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET B -2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY B -1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ARG B 0 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ILE B 1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU B 2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ PRO B 204 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU B 205 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLU B 206 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 207 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 208 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 209 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 210 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 211 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS B 212 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ALA C -10 UNP P22102 EXPRESSION TAG SEQADV 1MEJ SER C -9 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET C -8 UNP P22102 EXPRESSION TAG SEQADV 1MEJ THR C -7 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY C -6 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY C -5 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN C -4 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLN C -3 UNP P22102 EXPRESSION TAG SEQADV 1MEJ MET C -2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLY C -1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ARG C 0 UNP P22102 EXPRESSION TAG SEQADV 1MEJ ILE C 1 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU C 2 UNP P22102 EXPRESSION TAG SEQADV 1MEJ PRO C 204 UNP P22102 EXPRESSION TAG SEQADV 1MEJ LEU C 205 UNP P22102 EXPRESSION TAG SEQADV 1MEJ GLU C 206 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 207 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 208 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 209 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 210 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 211 UNP P22102 EXPRESSION TAG SEQADV 1MEJ HIS C 212 UNP P22102 EXPRESSION TAG SEQRES 1 B 223 ALA SER MET THR GLY GLY GLN GLN MET GLY ARG ILE LEU SEQRES 2 B 223 VAL ALA VAL LEU ILE SER GLY THR GLY SER ASN LEU GLN SEQRES 3 B 223 ALA LEU ILE ASP SER THR ARG GLU PRO ASN SER SER ALA SEQRES 4 B 223 GLN ILE ASP ILE VAL ILE SER ASN LYS ALA ALA VAL ALA SEQRES 5 B 223 GLY LEU ASP LYS ALA GLU ARG ALA GLY ILE PRO THR ARG SEQRES 6 B 223 VAL ILE ASN HIS LYS LEU TYR LYS ASN ARG VAL GLU PHE SEQRES 7 B 223 ASP SER ALA ILE ASP LEU VAL LEU GLU GLU PHE SER ILE SEQRES 8 B 223 ASP ILE VAL CYS LEU ALA GLY PHE MET ARG ILE LEU SER SEQRES 9 B 223 GLY PRO PHE VAL GLN LYS TRP ASN GLY LYS MET LEU ASN SEQRES 10 B 223 ILE HIS PRO SER LEU LEU PRO SER PHE LYS GLY SER ASN SEQRES 11 B 223 ALA HIS GLU GLN ALA LEU GLU THR GLY VAL THR VAL THR SEQRES 12 B 223 GLY CYS THR VAL HIS PHE VAL ALA GLU ASP VAL ASP ALA SEQRES 13 B 223 GLY GLN ILE ILE LEU GLN GLU ALA VAL PRO VAL LYS ARG SEQRES 14 B 223 GLY ASP THR VAL ALA THR LEU SER GLU ARG VAL LYS LEU SEQRES 15 B 223 ALA GLU HIS LYS ILE PHE PRO ALA ALA LEU GLN LEU VAL SEQRES 16 B 223 ALA SER GLY THR VAL GLN LEU GLY GLU ASN GLY LYS ILE SEQRES 17 B 223 CYS TRP VAL LYS GLU GLU PRO LEU GLU HIS HIS HIS HIS SEQRES 18 B 223 HIS HIS SEQRES 1 A 223 ALA SER MET THR GLY GLY GLN GLN MET GLY ARG ILE LEU SEQRES 2 A 223 VAL ALA VAL LEU ILE SER GLY THR GLY SER ASN LEU GLN SEQRES 3 A 223 ALA LEU ILE ASP SER THR ARG GLU PRO ASN SER SER ALA SEQRES 4 A 223 GLN ILE ASP ILE VAL ILE SER ASN LYS ALA ALA VAL ALA SEQRES 5 A 223 GLY LEU ASP LYS ALA GLU ARG ALA GLY ILE PRO THR ARG SEQRES 6 A 223 VAL ILE ASN HIS LYS LEU TYR LYS ASN ARG VAL GLU PHE SEQRES 7 A 223 ASP SER ALA ILE ASP LEU VAL LEU GLU GLU PHE SER ILE SEQRES 8 A 223 ASP ILE VAL CYS LEU ALA GLY PHE MET ARG ILE LEU SER SEQRES 9 A 223 GLY PRO PHE VAL GLN LYS TRP ASN GLY LYS MET LEU ASN SEQRES 10 A 223 ILE HIS PRO SER LEU LEU PRO SER PHE LYS GLY SER ASN SEQRES 11 A 223 ALA HIS GLU GLN ALA LEU GLU THR GLY VAL THR VAL THR SEQRES 12 A 223 GLY CYS THR VAL HIS PHE VAL ALA GLU ASP VAL ASP ALA SEQRES 13 A 223 GLY GLN ILE ILE LEU GLN GLU ALA VAL PRO VAL LYS ARG SEQRES 14 A 223 GLY ASP THR VAL ALA THR LEU SER GLU ARG VAL LYS LEU SEQRES 15 A 223 ALA GLU HIS LYS ILE PHE PRO ALA ALA LEU GLN LEU VAL SEQRES 16 A 223 ALA SER GLY THR VAL GLN LEU GLY GLU ASN GLY LYS ILE SEQRES 17 A 223 CYS TRP VAL LYS GLU GLU PRO LEU GLU HIS HIS HIS HIS SEQRES 18 A 223 HIS HIS SEQRES 1 C 223 ALA SER MET THR GLY GLY GLN GLN MET GLY ARG ILE LEU SEQRES 2 C 223 VAL ALA VAL LEU ILE SER GLY THR GLY SER ASN LEU GLN SEQRES 3 C 223 ALA LEU ILE ASP SER THR ARG GLU PRO ASN SER SER ALA SEQRES 4 C 223 GLN ILE ASP ILE VAL ILE SER ASN LYS ALA ALA VAL ALA SEQRES 5 C 223 GLY LEU ASP LYS ALA GLU ARG ALA GLY ILE PRO THR ARG SEQRES 6 C 223 VAL ILE ASN HIS LYS LEU TYR LYS ASN ARG VAL GLU PHE SEQRES 7 C 223 ASP SER ALA ILE ASP LEU VAL LEU GLU GLU PHE SER ILE SEQRES 8 C 223 ASP ILE VAL CYS LEU ALA GLY PHE MET ARG ILE LEU SER SEQRES 9 C 223 GLY PRO PHE VAL GLN LYS TRP ASN GLY LYS MET LEU ASN SEQRES 10 C 223 ILE HIS PRO SER LEU LEU PRO SER PHE LYS GLY SER ASN SEQRES 11 C 223 ALA HIS GLU GLN ALA LEU GLU THR GLY VAL THR VAL THR SEQRES 12 C 223 GLY CYS THR VAL HIS PHE VAL ALA GLU ASP VAL ASP ALA SEQRES 13 C 223 GLY GLN ILE ILE LEU GLN GLU ALA VAL PRO VAL LYS ARG SEQRES 14 C 223 GLY ASP THR VAL ALA THR LEU SER GLU ARG VAL LYS LEU SEQRES 15 C 223 ALA GLU HIS LYS ILE PHE PRO ALA ALA LEU GLN LEU VAL SEQRES 16 C 223 ALA SER GLY THR VAL GLN LEU GLY GLU ASN GLY LYS ILE SEQRES 17 C 223 CYS TRP VAL LYS GLU GLU PRO LEU GLU HIS HIS HIS HIS SEQRES 18 C 223 HIS HIS HET PO4 B 450 5 HET GOL A 451 6 HET GOL C 452 6 HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 PO4 O4 P 3- FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *448(H2 O) HELIX 1 1 GLY B 11 GLU B 23 1 13 HELIX 2 2 VAL B 40 ARG B 48 1 9 HELIX 3 3 ASN B 57 TYR B 61 5 5 HELIX 4 4 ASN B 63 PHE B 78 1 16 HELIX 5 5 SER B 93 TRP B 100 1 8 HELIX 6 6 ASN B 119 GLY B 128 1 10 HELIX 7 7 THR B 161 SER B 186 1 26 HELIX 8 8 GLY A 11 ARG A 22 1 12 HELIX 9 9 VAL A 40 ARG A 48 1 9 HELIX 10 10 ASN A 57 TYR A 61 5 5 HELIX 11 11 ASN A 63 PHE A 78 1 16 HELIX 12 12 SER A 93 TRP A 100 1 8 HELIX 13 13 ASN A 119 GLY A 128 1 10 HELIX 14 14 ASP A 142 GLY A 146 5 5 HELIX 15 15 THR A 161 SER A 186 1 26 HELIX 16 16 ASN C 13 ARG C 22 1 10 HELIX 17 17 VAL C 40 ALA C 49 1 10 HELIX 18 18 ASN C 57 TYR C 61 5 5 HELIX 19 19 ASN C 63 PHE C 78 1 16 HELIX 20 20 SER C 93 TRP C 100 1 8 HELIX 21 21 ASN C 119 GLY C 128 1 10 HELIX 22 22 ASP C 142 GLY C 146 5 5 HELIX 23 23 THR C 161 SER C 186 1 26 SHEET 1 A 7 THR B 53 VAL B 55 0 SHEET 2 A 7 ALA B 28 SER B 35 1 N SER B 35 O ARG B 54 SHEET 3 A 7 ILE B 1 ILE B 7 1 N VAL B 3 O GLN B 29 SHEET 4 A 7 ILE B 82 LEU B 85 1 O CYS B 84 N ALA B 4 SHEET 5 A 7 MET B 104 HIS B 108 1 O LEU B 105 N LEU B 85 SHEET 6 A 7 VAL B 131 PHE B 138 -1 O THR B 135 N HIS B 108 SHEET 7 A 7 ILE B 148 PRO B 155 -1 O VAL B 154 N THR B 132 SHEET 1 B 2 VAL B 189 LEU B 191 0 SHEET 2 B 2 ILE B 197 TRP B 199 -1 O CYS B 198 N GLN B 190 SHEET 1 C 7 THR A 53 VAL A 55 0 SHEET 2 C 7 ALA A 28 SER A 35 1 N SER A 35 O ARG A 54 SHEET 3 C 7 ILE A 1 ILE A 7 1 N ILE A 7 O ILE A 34 SHEET 4 C 7 ILE A 82 LEU A 85 1 O CYS A 84 N ALA A 4 SHEET 5 C 7 MET A 104 HIS A 108 1 O LEU A 105 N LEU A 85 SHEET 6 C 7 VAL A 131 PHE A 138 -1 O THR A 135 N HIS A 108 SHEET 7 C 7 ILE A 148 PRO A 155 -1 O VAL A 154 N THR A 132 SHEET 1 D 2 VAL A 189 LEU A 191 0 SHEET 2 D 2 ILE A 197 TRP A 199 -1 O CYS A 198 N GLN A 190 SHEET 1 E 7 THR C 53 VAL C 55 0 SHEET 2 E 7 ALA C 28 SER C 35 1 N SER C 35 O ARG C 54 SHEET 3 E 7 ILE C 1 ILE C 7 1 N VAL C 3 O GLN C 29 SHEET 4 E 7 ILE C 82 LEU C 85 1 O CYS C 84 N LEU C 6 SHEET 5 E 7 MET C 104 HIS C 108 1 O LEU C 105 N LEU C 85 SHEET 6 E 7 VAL C 131 PHE C 138 -1 O THR C 135 N HIS C 108 SHEET 7 E 7 ILE C 148 PRO C 155 -1 O VAL C 154 N THR C 132 SHEET 1 F 2 VAL C 189 LEU C 191 0 SHEET 2 F 2 ILE C 197 TRP C 199 -1 O CYS C 198 N GLN C 190 CISPEP 1 LEU B 112 PRO B 113 0 0.44 CISPEP 2 LEU A 112 PRO A 113 0 0.43 CISPEP 3 LEU C 112 PRO C 113 0 0.72 SITE 1 AC1 10 GLY B 11 SER B 12 ASN B 13 LYS B 170 SITE 2 AC1 10 HOH B 451 HOH B 456 HOH B 460 HOH B 505 SITE 3 AC1 10 HOH B 520 HOH B 522 SITE 1 AC2 7 THR A 10 GLY A 11 SER A 12 ASN A 13 SITE 2 AC2 7 LYS A 170 HOH A 474 HOH A 492 SITE 1 AC3 5 THR C 10 GLY C 11 SER C 12 ASN C 13 SITE 2 AC3 5 HOH C 462 CRYST1 152.510 152.510 193.390 90.00 90.00 120.00 H 3 2 54 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006557 0.003786 0.000000 0.00000 SCALE2 0.000000 0.007571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005171 0.00000