HEADER STRUCTURAL PROTEIN 28-AUG-02 1MK9 TITLE CRYSTAL STRUCTURE OF AN INTEGRIN BETA3-TALIN CHIMERA COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRIN BETA3; COMPND 3 CHAIN: A, C, E, G; COMPND 4 FRAGMENT: PARTIAL CYTOPLASMIC TAIL (RESIDUES 739-750); COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: FORMS CHIMERA WITH TALIN AT THE C-TERMINUS; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: TALIN; COMPND 9 CHAIN: B, D, F, H; COMPND 10 FRAGMENT: F2 AND F3 SUBDOMAINS OF FERM DOMAIN (RESIDUES COMPND 11 209-400); COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: FORMS CHIMERA WITH INTEGRIN BETA3 AT THE N- COMPND 14 TERMINUS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 12 ORGANISM_COMMON: CHICKEN; SOURCE 13 ORGANISM_TAXID: 9031; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FOCAL ADHESION, INTEGRIN BINDING, FERM DOMAIN, CYTOSKELETON KEYWDS 2 NPXY MOTIF, PTB DOMAIN, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.GARCIA-ALVAREZ,J.M.DE PEREDA,D.A.CALDERWOOD,T.S.ULMER, AUTHOR 2 D.CRITCHLEY,I.D.CAMPBELL,M.H.GINSBERG,R.C.LIDDINGTON REVDAT 2 24-FEB-09 1MK9 1 VERSN REVDAT 1 28-JAN-03 1MK9 0 JRNL AUTH B.GARCIA-ALVAREZ,J.M.DE PEREDA,D.A.CALDERWOOD, JRNL AUTH 2 T.S.ULMER,D.CRITCHLEY,I.D.CAMPBELL,M.H.GINSBERG, JRNL AUTH 3 R.C.LIDDINGTON JRNL TITL STRUCTURAL DETERMINANTS OF INTEGRIN RECOGNITION BY JRNL TITL 2 TALIN JRNL REF MOL.CELL V. 11 49 2003 JRNL REFN ISSN 1097-2765 JRNL PMID 12535520 JRNL DOI 10.1016/S1097-2765(02)00823-7 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 18821 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.327 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1387 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2961 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE : 0.4120 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 7.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 236 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.027 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6609 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 31 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 6.96000 REMARK 3 B22 (A**2) : 2.34000 REMARK 3 B33 (A**2) : -9.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.36 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.54 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.55 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.60 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.01 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.32 REMARK 3 BSOL : 27.96 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MK9 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-02. REMARK 100 THE RCSB ID CODE IS RCSB016977. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU FR-D REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18904 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 29.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.8 REMARK 200 DATA REDUNDANCY : 3.110 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 (MOLREP) REMARK 200 STARTING MODEL: PDB ENTRY 1MIX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, MAGNESIUM CHLORIDE, TRIS- REMARK 280 HCL, PH 8.6, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 70.88150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12300 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 735 REMARK 465 SER A 736 REMARK 465 HIS A 737 REMARK 465 LYS B 322 REMARK 465 ASN B 323 REMARK 465 LYS B 324 REMARK 465 ILE B 399 REMARK 465 LEU B 400 REMARK 465 GLY C 735 REMARK 465 GLY E 735 REMARK 465 SER E 736 REMARK 465 ILE F 399 REMARK 465 LEU F 400 REMARK 465 GLY G 735 REMARK 465 SER G 736 REMARK 465 MET H 319 REMARK 465 LYS H 320 REMARK 465 GLY H 321 REMARK 465 LYS H 322 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN B 253 CG CD OE1 NE2 REMARK 480 LYS B 263 CG CD CE NZ REMARK 480 LYS B 268 CG CD CE NZ REMARK 480 ARG B 297 CG CD NE CZ NH1 NH2 REMARK 480 LYS B 318 CG CD CE NZ REMARK 480 LYS B 320 CG CD CE NZ REMARK 480 LYS D 263 CG CD CE NZ REMARK 480 ARG D 277 CG CD NE CZ NH1 NH2 REMARK 480 LYS D 318 CG CD CE NZ REMARK 480 LYS D 322 CG CD CE NZ REMARK 480 LYS D 364 CG CD CE NZ REMARK 480 GLN D 381 CG CD OE1 NE2 REMARK 480 LYS F 263 CG CD CE NZ REMARK 480 LYS F 268 CG CD CE NZ REMARK 480 LYS F 306 CG CD CE NZ REMARK 480 LYS F 320 CG CD CE NZ REMARK 480 LYS F 322 CG CD CE NZ REMARK 480 ASN F 323 CG OD1 ND2 REMARK 480 LYS F 324 CG CD CE NZ REMARK 480 THR F 344 CB OG1 CG2 REMARK 480 LYS H 318 CG CD CE NZ REMARK 480 GLN H 374 CG CD OE1 NE2 REMARK 480 GLN H 381 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 317 NH1 ARG D 328 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN F 323 CD2 LEU H 214 1455 1.55 REMARK 500 ND2 ASN F 323 CD1 LEU H 214 1455 1.89 REMARK 500 ND2 ASN F 323 CG LEU H 214 1455 1.93 REMARK 500 OD1 ASP C 740 NZ LYS F 364 2556 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ALA A 750 N - CA - C ANGL. DEV. = -16.9 DEGREES REMARK 500 GLU E 749 N - CA - C ANGL. DEV. = 19.1 DEGREES REMARK 500 ARG F 277 CG - CD - NE ANGL. DEV. = -14.6 DEGREES REMARK 500 ARG F 277 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG F 277 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LYS H 274 N - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 747 -67.36 -105.80 REMARK 500 GLU A 749 95.22 -55.04 REMARK 500 GLU B 252 26.32 -61.74 REMARK 500 LYS B 254 -56.33 -157.08 REMARK 500 LEU B 262 -30.19 -39.12 REMARK 500 LYS B 263 38.95 -75.33 REMARK 500 ASP B 264 -20.84 -154.08 REMARK 500 LYS B 268 -59.00 -29.81 REMARK 500 GLU B 269 3.53 -62.85 REMARK 500 GLN B 273 38.17 -75.04 REMARK 500 LYS B 274 98.63 -22.05 REMARK 500 LYS B 320 99.58 -65.49 REMARK 500 LYS B 345 35.66 71.74 REMARK 500 THR B 354 3.44 -53.91 REMARK 500 MET C 738 50.81 -97.06 REMARK 500 ASN C 743 81.24 64.67 REMARK 500 GLU C 749 43.38 -71.30 REMARK 500 PHE D 232 -81.55 -16.16 REMARK 500 PRO D 249 161.13 -49.75 REMARK 500 GLU D 252 2.20 -49.52 REMARK 500 GLN D 253 -64.37 -93.12 REMARK 500 PRO D 257 130.70 -36.06 REMARK 500 PHE D 265 -6.45 -146.53 REMARK 500 LYS D 268 -37.85 -30.62 REMARK 500 GLU D 269 34.98 -80.06 REMARK 500 TYR D 270 -22.84 -157.21 REMARK 500 GLN D 273 -38.91 -28.55 REMARK 500 LYS D 274 74.93 65.07 REMARK 500 ASN D 285 6.60 -66.82 REMARK 500 THR D 307 -8.56 -58.13 REMARK 500 LYS D 320 152.08 -49.08 REMARK 500 PRO D 327 138.27 -39.82 REMARK 500 LYS D 345 -5.68 79.38 REMARK 500 PRO D 363 0.55 -56.61 REMARK 500 LYS D 364 38.03 -154.51 REMARK 500 SER D 365 156.80 179.37 REMARK 500 TYR D 373 -85.36 -41.31 REMARK 500 LEU D 391 -77.12 -49.20 REMARK 500 ILE D 399 49.87 -99.33 REMARK 500 ASN E 743 52.55 70.27 REMARK 500 GLU E 749 60.18 -41.53 REMARK 500 GLU F 252 -50.80 -25.59 REMARK 500 LEU F 262 -46.83 -25.83 REMARK 500 LYS F 274 107.14 -52.47 REMARK 500 LYS F 316 -156.84 -87.75 REMARK 500 GLU F 317 105.90 170.63 REMARK 500 LYS F 324 142.77 174.21 REMARK 500 GLU F 342 -6.57 -53.54 REMARK 500 THR F 354 3.76 -63.73 REMARK 500 PRO F 363 -16.44 -46.28 REMARK 500 ASP F 372 98.83 -45.78 REMARK 500 TRP G 739 150.58 -44.72 REMARK 500 GLU G 749 14.72 -60.51 REMARK 500 ASN H 225 43.97 -100.54 REMARK 500 PRO H 249 145.14 -39.60 REMARK 500 GLU H 252 -8.15 -44.24 REMARK 500 HIS H 255 69.71 -102.17 REMARK 500 PRO H 257 121.93 -22.77 REMARK 500 ILE H 271 -74.54 -48.54 REMARK 500 GLN H 273 42.69 -71.78 REMARK 500 LYS H 274 92.00 -11.97 REMARK 500 ASN H 285 16.65 -69.33 REMARK 500 SER H 304 -6.10 -55.10 REMARK 500 LYS H 334 14.04 -50.55 REMARK 500 LYS H 345 -1.64 72.00 REMARK 500 ASN H 355 -9.10 -56.93 REMARK 500 ASP H 372 109.38 -43.93 REMARK 500 THR H 382 142.63 -178.84 REMARK 500 GLU H 384 49.28 -92.01 REMARK 500 GLU H 386 -71.42 -57.29 REMARK 500 LEU H 391 -71.77 -57.43 REMARK 500 ILE H 392 -34.18 -39.01 REMARK 500 ALA H 393 -72.58 -63.21 REMARK 500 ASP H 397 -78.85 -39.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MIX RELATED DB: PDB REMARK 900 TALIN REMARK 900 RELATED ID: 1MIZ RELATED DB: PDB REMARK 900 FUSION PROTEIN CONSISTING OF TALIN AND INTEGRIN BETA3 REMARK 900 RELATED ID: 1MK7 RELATED DB: PDB REMARK 900 FUSION PROTEIN CONSISTING OF TALIN AND INTEGRIN BETA3 REMARK 999 REMARK 999 SEQUENCE REMARK 999 AUTHORS INFORMED THAT THE SEQUENCE OF REMARK 999 CHICKEN TALIN IS NOT AVAILABLE IN ANY REMARK 999 REFERENCE DATABASE. THE SEQUENCE HAS REMARK 999 BEEN DESCRIBED IN THE PUBLICATION: REMARK 999 REMARK 999 HEMMINGS, L., REES, D.J.G., OHANIAN, V., REMARK 999 BOLTON, S.J., GILMORE, A.P., PATEL, N., REMARK 999 PRIDDLE, H., TREVITHICK, J.E., HYNES, REMARK 999 R.O., & CRITCHLEY, D.R. (1996). TALIN REMARK 999 CONTAINS THREE ACTIN-BINDING SITES EACH REMARK 999 OF WHICH IS ADJACENT TO A VINCULIN-BINDING REMARK 999 SITE. J. CELL SCI., 109, 2715-2726. DBREF 1MK9 A 739 750 UNP P05106 ITB3_HUMAN 765 776 DBREF 1MK9 B 209 400 UNP P54939 TLN1_CHICK 209 400 DBREF 1MK9 C 739 750 UNP P05106 ITB3_HUMAN 765 776 DBREF 1MK9 D 209 400 UNP P54939 TLN1_CHICK 209 400 DBREF 1MK9 E 739 750 UNP P05106 ITB3_HUMAN 765 776 DBREF 1MK9 F 209 400 UNP P54939 TLN1_CHICK 209 400 DBREF 1MK9 G 739 750 UNP P05106 ITB3_HUMAN 765 776 DBREF 1MK9 H 209 400 UNP P54939 TLN1_CHICK 209 400 SEQADV 1MK9 GLY A 735 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 SER A 736 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 HIS A 737 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 MET A 738 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 GLY C 735 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 SER C 736 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 HIS C 737 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 MET C 738 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 GLY E 735 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 SER E 736 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 HIS E 737 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 MET E 738 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 GLY G 735 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 SER G 736 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 HIS G 737 UNP P05106 CLONING ARTIFACT SEQADV 1MK9 MET G 738 UNP P05106 CLONING ARTIFACT SEQRES 1 A 16 GLY SER HIS MET TRP ASP THR ALA ASN ASN PRO LEU TYR SEQRES 2 A 16 LYS GLU ALA SEQRES 1 B 192 PRO VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP SEQRES 2 B 192 ASP ILE LEU ASN GLY SER HIS PRO VAL SER PHE ASP LYS SEQRES 3 B 192 ALA CYS GLU PHE ALA GLY TYR GLN CYS GLN ILE GLN PHE SEQRES 4 B 192 GLY PRO HIS ASN GLU GLN LYS HIS LYS PRO GLY PHE LEU SEQRES 5 B 192 GLU LEU LYS ASP PHE LEU PRO LYS GLU TYR ILE LYS GLN SEQRES 6 B 192 LYS GLY GLU ARG LYS ILE PHE MET ALA HIS LYS ASN CYS SEQRES 7 B 192 GLY ASN MET SER GLU ILE GLU ALA LYS VAL ARG TYR VAL SEQRES 8 B 192 LYS LEU ALA ARG SER LEU LYS THR TYR GLY VAL SER PHE SEQRES 9 B 192 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 10 B 192 VAL PRO ARG LEU LEU GLY ILE THR LYS GLU CYS VAL MET SEQRES 11 B 192 ARG VAL ASP GLU LYS THR LYS GLU VAL ILE GLN GLU TRP SEQRES 12 B 192 SER LEU THR ASN ILE LYS ARG TRP ALA ALA SER PRO LYS SEQRES 13 B 192 SER PHE THR LEU ASP PHE GLY ASP TYR GLN ASP GLY TYR SEQRES 14 B 192 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE ALA GLN SEQRES 15 B 192 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU SEQRES 1 C 16 GLY SER HIS MET TRP ASP THR ALA ASN ASN PRO LEU TYR SEQRES 2 C 16 LYS GLU ALA SEQRES 1 D 192 PRO VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP SEQRES 2 D 192 ASP ILE LEU ASN GLY SER HIS PRO VAL SER PHE ASP LYS SEQRES 3 D 192 ALA CYS GLU PHE ALA GLY TYR GLN CYS GLN ILE GLN PHE SEQRES 4 D 192 GLY PRO HIS ASN GLU GLN LYS HIS LYS PRO GLY PHE LEU SEQRES 5 D 192 GLU LEU LYS ASP PHE LEU PRO LYS GLU TYR ILE LYS GLN SEQRES 6 D 192 LYS GLY GLU ARG LYS ILE PHE MET ALA HIS LYS ASN CYS SEQRES 7 D 192 GLY ASN MET SER GLU ILE GLU ALA LYS VAL ARG TYR VAL SEQRES 8 D 192 LYS LEU ALA ARG SER LEU LYS THR TYR GLY VAL SER PHE SEQRES 9 D 192 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 10 D 192 VAL PRO ARG LEU LEU GLY ILE THR LYS GLU CYS VAL MET SEQRES 11 D 192 ARG VAL ASP GLU LYS THR LYS GLU VAL ILE GLN GLU TRP SEQRES 12 D 192 SER LEU THR ASN ILE LYS ARG TRP ALA ALA SER PRO LYS SEQRES 13 D 192 SER PHE THR LEU ASP PHE GLY ASP TYR GLN ASP GLY TYR SEQRES 14 D 192 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE ALA GLN SEQRES 15 D 192 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU SEQRES 1 E 16 GLY SER HIS MET TRP ASP THR ALA ASN ASN PRO LEU TYR SEQRES 2 E 16 LYS GLU ALA SEQRES 1 F 192 PRO VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP SEQRES 2 F 192 ASP ILE LEU ASN GLY SER HIS PRO VAL SER PHE ASP LYS SEQRES 3 F 192 ALA CYS GLU PHE ALA GLY TYR GLN CYS GLN ILE GLN PHE SEQRES 4 F 192 GLY PRO HIS ASN GLU GLN LYS HIS LYS PRO GLY PHE LEU SEQRES 5 F 192 GLU LEU LYS ASP PHE LEU PRO LYS GLU TYR ILE LYS GLN SEQRES 6 F 192 LYS GLY GLU ARG LYS ILE PHE MET ALA HIS LYS ASN CYS SEQRES 7 F 192 GLY ASN MET SER GLU ILE GLU ALA LYS VAL ARG TYR VAL SEQRES 8 F 192 LYS LEU ALA ARG SER LEU LYS THR TYR GLY VAL SER PHE SEQRES 9 F 192 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 10 F 192 VAL PRO ARG LEU LEU GLY ILE THR LYS GLU CYS VAL MET SEQRES 11 F 192 ARG VAL ASP GLU LYS THR LYS GLU VAL ILE GLN GLU TRP SEQRES 12 F 192 SER LEU THR ASN ILE LYS ARG TRP ALA ALA SER PRO LYS SEQRES 13 F 192 SER PHE THR LEU ASP PHE GLY ASP TYR GLN ASP GLY TYR SEQRES 14 F 192 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE ALA GLN SEQRES 15 F 192 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU SEQRES 1 G 16 GLY SER HIS MET TRP ASP THR ALA ASN ASN PRO LEU TYR SEQRES 2 G 16 LYS GLU ALA SEQRES 1 H 192 PRO VAL GLN LEU ASN LEU LEU TYR VAL GLN ALA ARG ASP SEQRES 2 H 192 ASP ILE LEU ASN GLY SER HIS PRO VAL SER PHE ASP LYS SEQRES 3 H 192 ALA CYS GLU PHE ALA GLY TYR GLN CYS GLN ILE GLN PHE SEQRES 4 H 192 GLY PRO HIS ASN GLU GLN LYS HIS LYS PRO GLY PHE LEU SEQRES 5 H 192 GLU LEU LYS ASP PHE LEU PRO LYS GLU TYR ILE LYS GLN SEQRES 6 H 192 LYS GLY GLU ARG LYS ILE PHE MET ALA HIS LYS ASN CYS SEQRES 7 H 192 GLY ASN MET SER GLU ILE GLU ALA LYS VAL ARG TYR VAL SEQRES 8 H 192 LYS LEU ALA ARG SER LEU LYS THR TYR GLY VAL SER PHE SEQRES 9 H 192 PHE LEU VAL LYS GLU LYS MET LYS GLY LYS ASN LYS LEU SEQRES 10 H 192 VAL PRO ARG LEU LEU GLY ILE THR LYS GLU CYS VAL MET SEQRES 11 H 192 ARG VAL ASP GLU LYS THR LYS GLU VAL ILE GLN GLU TRP SEQRES 12 H 192 SER LEU THR ASN ILE LYS ARG TRP ALA ALA SER PRO LYS SEQRES 13 H 192 SER PHE THR LEU ASP PHE GLY ASP TYR GLN ASP GLY TYR SEQRES 14 H 192 TYR SER VAL GLN THR THR GLU GLY GLU GLN ILE ALA GLN SEQRES 15 H 192 LEU ILE ALA GLY TYR ILE ASP ILE ILE LEU FORMUL 9 HOH *31(H2 O) HELIX 1 1 PRO B 209 ASN B 225 1 17 HELIX 2 2 SER B 231 GLY B 248 1 18 HELIX 3 3 PRO B 267 ILE B 271 5 5 HELIX 4 4 GLY B 275 CYS B 286 1 12 HELIX 5 5 SER B 290 LEU B 305 1 16 HELIX 6 6 THR B 354 ILE B 356 5 3 HELIX 7 7 GLU B 384 ILE B 398 1 15 HELIX 8 8 PRO D 209 ASN D 225 1 17 HELIX 9 9 SER D 231 GLY D 248 1 18 HELIX 10 10 GLU D 261 PHE D 265 5 5 HELIX 11 11 PRO D 267 LYS D 272 1 6 HELIX 12 12 GLY D 275 ASN D 285 1 11 HELIX 13 13 SER D 290 SER D 304 1 15 HELIX 14 14 THR D 354 ILE D 356 5 3 HELIX 15 15 GLU D 384 ASP D 397 1 14 HELIX 16 16 PRO F 209 ASN F 225 1 17 HELIX 17 17 SER F 231 PHE F 247 1 17 HELIX 18 18 GLU F 261 PHE F 265 5 5 HELIX 19 19 PRO F 267 ILE F 271 5 5 HELIX 20 20 GLU F 276 CYS F 286 1 11 HELIX 21 21 SER F 290 LEU F 305 1 16 HELIX 22 22 THR F 354 ILE F 356 5 3 HELIX 23 23 GLU F 384 ILE F 396 1 13 HELIX 24 24 PRO H 209 ASN H 225 1 17 HELIX 25 25 SER H 231 GLY H 248 1 18 HELIX 26 26 GLU H 261 PHE H 265 5 5 HELIX 27 27 PRO H 267 ILE H 271 5 5 HELIX 28 28 GLY H 275 ASN H 285 1 11 HELIX 29 29 ILE H 292 SER H 304 1 13 HELIX 30 30 GLU H 384 ILE H 399 1 16 SHEET 1 A 4 ASP A 740 THR A 741 0 SHEET 2 A 4 ARG D 358 SER D 362 -1 O TRP D 359 N ASP A 740 SHEET 3 A 4 SER D 365 ASP D 372 -1 O ASP D 369 N ARG D 358 SHEET 4 A 4 GLY D 376 VAL D 380 -1 O GLY D 376 N ASP D 372 SHEET 1 B 4 SER B 311 LYS B 316 0 SHEET 2 B 4 PRO B 327 THR B 333 -1 O ARG B 328 N VAL B 315 SHEET 3 B 4 CYS B 336 ASP B 341 -1 O VAL B 340 N LEU B 329 SHEET 4 B 4 VAL B 347 SER B 352 -1 O ILE B 348 N ARG B 339 SHEET 1 C 4 TYR B 377 GLN B 381 0 SHEET 2 C 4 SER B 365 ASP B 369 -1 N LEU B 368 O TYR B 378 SHEET 3 C 4 ARG B 358 SER B 362 -1 N ALA B 360 O THR B 367 SHEET 4 C 4 ASP C 740 THR C 741 -1 O ASP C 740 N TRP B 359 SHEET 1 D 4 PHE D 313 GLU D 317 0 SHEET 2 D 4 VAL D 326 ILE D 332 -1 O ARG D 328 N VAL D 315 SHEET 3 D 4 CYS D 336 ASP D 341 -1 O VAL D 340 N LEU D 329 SHEET 4 D 4 VAL D 347 SER D 352 -1 O ILE D 348 N ARG D 339 SHEET 1 E 4 TRP E 739 THR E 741 0 SHEET 2 E 4 ARG H 358 ALA H 361 -1 O TRP H 359 N ASP E 740 SHEET 3 E 4 SER H 365 ASP H 369 -1 O THR H 367 N ALA H 360 SHEET 4 E 4 TYR H 377 GLN H 381 -1 O VAL H 380 N PHE H 366 SHEET 1 F 4 SER F 311 VAL F 315 0 SHEET 2 F 4 ARG F 328 THR F 333 -1 O ARG F 328 N VAL F 315 SHEET 3 F 4 CYS F 336 VAL F 340 -1 O VAL F 340 N LEU F 329 SHEET 4 F 4 VAL F 347 SER F 352 -1 O ILE F 348 N ARG F 339 SHEET 1 G 4 TYR F 378 GLN F 381 0 SHEET 2 G 4 SER F 365 ASP F 369 -1 N LEU F 368 O TYR F 378 SHEET 3 G 4 ARG F 358 SER F 362 -1 N SER F 362 O SER F 365 SHEET 4 G 4 ASP G 740 THR G 741 -1 O ASP G 740 N TRP F 359 SHEET 1 H 4 SER H 311 GLU H 317 0 SHEET 2 H 4 VAL H 326 THR H 333 -1 O ARG H 328 N VAL H 315 SHEET 3 H 4 CYS H 336 VAL H 340 -1 O VAL H 340 N LEU H 329 SHEET 4 H 4 VAL H 347 SER H 352 -1 O TRP H 351 N VAL H 337 LINK C ALA A 750 N PRO B 209 1555 1555 1.34 LINK C ALA C 750 N PRO D 209 1555 1555 1.34 LINK C ALA E 750 N PRO F 209 1555 1555 1.33 LINK C ALA G 750 N PRO H 209 1555 1555 1.35 CRYST1 50.257 141.763 59.597 90.00 90.11 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019898 0.000000 0.000038 0.00000 SCALE2 0.000000 0.007054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016779 0.00000