data_1MLX
# 
_entry.id   1MLX 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.386 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1MLX         pdb_00001mlx 10.2210/pdb1mlx/pdb 
NDB   AD0028       ?            ?                   
RCSB  RCSB017004   ?            ?                   
WWPDB D_1000017004 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2002-12-04 
2 'Structure model' 1 1 2008-04-28 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2017-10-11 
5 'Structure model' 1 4 2024-02-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Refinement description'    
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
6 5 'Structure model' 'Derived calculations'      
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' software       
2 5 'Structure model' chem_comp_atom 
3 5 'Structure model' chem_comp_bond 
4 5 'Structure model' database_2     
5 5 'Structure model' struct_conn    
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  4 'Structure model' '_software.classification'            
2  4 'Structure model' '_software.name'                      
3  5 'Structure model' '_database_2.pdbx_DOI'                
4  5 'Structure model' '_database_2.pdbx_database_accession' 
5  5 'Structure model' '_struct_conn.pdbx_dist_value'        
6  5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 
7  5 'Structure model' '_struct_conn.ptnr1_auth_asym_id'     
8  5 'Structure model' '_struct_conn.ptnr1_auth_comp_id'     
9  5 'Structure model' '_struct_conn.ptnr1_auth_seq_id'      
10 5 'Structure model' '_struct_conn.ptnr1_label_asym_id'    
11 5 'Structure model' '_struct_conn.ptnr1_label_comp_id'    
12 5 'Structure model' '_struct_conn.ptnr1_label_seq_id'     
13 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id'     
14 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id'     
15 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id'      
16 5 'Structure model' '_struct_conn.ptnr2_label_asym_id'    
17 5 'Structure model' '_struct_conn.ptnr2_label_comp_id'    
18 5 'Structure model' '_struct_conn.ptnr2_label_seq_id'     
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        1MLX 
_pdbx_database_status.recvd_initial_deposition_date   2002-08-31 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.SG_entry                        . 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Prakash, T.P.'  1 
'Manoharan, M.'  2 
'Kawasaki, A.M.' 3 
'Fraser, A.S.'   4 
'Lesnik, E.A.'   5 
'Sioufi, N.'     6 
'Leeds, J.M.'    7 
'Teplova, M.'    8 
'Egli, M.'       9 
# 
_citation.id                        primary 
_citation.title                     
;2'-O-[2-(Methylthio)ethyl]-Modified Oligonucleotide: An Analogue of 2'-O-[2-(Methoxy)-ethyl]-Modified  
Oligonucleotide with Improved Protein Binding Properties and High Binding Affinity to Target RNA
;
_citation.journal_abbrev            Biochemistry 
_citation.journal_volume            41 
_citation.page_first                11642 
_citation.page_last                 11648 
_citation.year                      2002 
_citation.journal_id_ASTM           BICHAW 
_citation.country                   US 
_citation.journal_id_ISSN           0006-2960 
_citation.journal_id_CSD            0033 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   12269806 
_citation.pdbx_database_id_DOI      10.1021/bi020264t 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Prakash, T.P.'  1 ? 
primary 'Manoharan, M.'  2 ? 
primary 'Kawasaki, A.M.' 3 ? 
primary 'Fraser, A.S.'   4 ? 
primary 'Lesnik, E.A.'   5 ? 
primary 'Sioufi, N.'     6 ? 
primary 'Leeds, J.M.'    7 ? 
primary 'Teplova, M.'    8 ? 
primary 'Egli, M.'       9 ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer syn "5'-D(*GP*CP*GP*TP*AP*SMTP*AP*CP*GP*C)-3'" 3135.150 2   ? ? ? 
;Self-complementary DNA Decamer with a 2'-O-[2-(Methylthio)ethyl]-Modified Thymine (SMT) at Position 6
;
2 water   nat water                                      18.015   146 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   yes 
_entity_poly.pdbx_seq_one_letter_code       '(DG)(DC)(DG)(DT)(DA)(SMT)(DA)(DC)(DG)(DC)' 
_entity_poly.pdbx_seq_one_letter_code_can   GCGTATACGC 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
_pdbx_entity_nonpoly.entity_id   2 
_pdbx_entity_nonpoly.name        water 
_pdbx_entity_nonpoly.comp_id     HOH 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DG  n 
1 2  DC  n 
1 3  DG  n 
1 4  DT  n 
1 5  DA  n 
1 6  SMT n 
1 7  DA  n 
1 8  DC  n 
1 9  DG  n 
1 10 DC  n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                'solid phase oligonucleotide synthesis' 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA  'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE"                   ? 'C10 H14 N5 O6 P'   331.222 
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"                    ? 'C9 H14 N3 O7 P'    307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE"                   ? 'C10 H14 N5 O7 P'   347.221 
DT  'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"                           ? 'C10 H15 N2 O8 P'   322.208 
HOH non-polymer   . WATER                                                  ? 'H2 O'              18.015  
SMT 'RNA linking' n "2'-[(METHYLTHIO)ETHYLOXY]-THYMIDINE-5'-MONOPHOSPHATE" ? 'C13 H21 N2 O9 P S' 412.353 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DG  1  1   1   DG  GUA A . n 
A 1 2  DC  2  2   2   DC  CYT A . n 
A 1 3  DG  3  3   3   DG  GUA A . n 
A 1 4  DT  4  4   4   DT  THY A . n 
A 1 5  DA  5  5   5   DA  ADE A . n 
A 1 6  SMT 6  6   6   SMT MSE A . n 
A 1 7  DA  7  7   7   DA  ADE A . n 
A 1 8  DC  8  8   8   DC  CYT A . n 
A 1 9  DG  9  9   9   DG  GUA A . n 
A 1 10 DC  10 10  10  DC  CYT A . n 
B 1 1  DG  1  111 111 DG  GUA B . n 
B 1 2  DC  2  112 112 DC  CYT B . n 
B 1 3  DG  3  113 113 DG  GUA B . n 
B 1 4  DT  4  114 114 DT  THY B . n 
B 1 5  DA  5  115 115 DA  ADE B . n 
B 1 6  SMT 6  116 116 SMT MSE B . n 
B 1 7  DA  7  117 117 DA  ADE B . n 
B 1 8  DC  8  118 118 DC  CYT B . n 
B 1 9  DG  9  119 119 DG  GUA B . n 
B 1 10 DC  10 120 120 DC  CYT B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 HOH 1  701  701  HOH TIP A . 
C 2 HOH 2  702  702  HOH TIP A . 
C 2 HOH 3  704  704  HOH TIP A . 
C 2 HOH 4  705  705  HOH TIP A . 
C 2 HOH 5  707  707  HOH TIP A . 
C 2 HOH 6  708  708  HOH TIP A . 
C 2 HOH 7  709  709  HOH TIP A . 
C 2 HOH 8  710  710  HOH TIP A . 
C 2 HOH 9  711  711  HOH TIP A . 
C 2 HOH 10 712  712  HOH TIP A . 
C 2 HOH 11 714  714  HOH TIP A . 
C 2 HOH 12 715  715  HOH TIP A . 
C 2 HOH 13 716  716  HOH TIP A . 
C 2 HOH 14 718  718  HOH TIP A . 
C 2 HOH 15 721  721  HOH TIP A . 
C 2 HOH 16 722  722  HOH TIP A . 
C 2 HOH 17 723  723  HOH TIP A . 
C 2 HOH 18 724  724  HOH TIP A . 
C 2 HOH 19 725  725  HOH TIP A . 
C 2 HOH 20 729  729  HOH TIP A . 
C 2 HOH 21 730  730  HOH TIP A . 
C 2 HOH 22 732  732  HOH TIP A . 
C 2 HOH 23 734  734  HOH TIP A . 
C 2 HOH 24 735  735  HOH TIP A . 
C 2 HOH 25 737  737  HOH TIP A . 
C 2 HOH 26 739  739  HOH TIP A . 
C 2 HOH 27 741  741  HOH TIP A . 
C 2 HOH 28 745  745  HOH TIP A . 
C 2 HOH 29 746  746  HOH TIP A . 
C 2 HOH 30 751  751  HOH TIP A . 
C 2 HOH 31 753  753  HOH TIP A . 
C 2 HOH 32 756  756  HOH TIP A . 
C 2 HOH 33 761  761  HOH TIP A . 
C 2 HOH 34 762  762  HOH TIP A . 
C 2 HOH 35 767  767  HOH TIP A . 
C 2 HOH 36 771  771  HOH TIP A . 
C 2 HOH 37 772  772  HOH TIP A . 
C 2 HOH 38 776  776  HOH TIP A . 
C 2 HOH 39 784  784  HOH TIP A . 
C 2 HOH 40 789  789  HOH TIP A . 
C 2 HOH 41 793  793  HOH TIP A . 
C 2 HOH 42 800  800  HOH TIP A . 
C 2 HOH 43 802  802  HOH TIP A . 
C 2 HOH 44 806  806  HOH TIP A . 
C 2 HOH 45 807  807  HOH TIP A . 
C 2 HOH 46 809  809  HOH TIP A . 
C 2 HOH 47 810  810  HOH TIP A . 
C 2 HOH 48 813  813  HOH TIP A . 
C 2 HOH 49 814  814  HOH TIP A . 
C 2 HOH 50 817  817  HOH TIP A . 
C 2 HOH 51 818  818  HOH TIP A . 
C 2 HOH 52 820  820  HOH TIP A . 
C 2 HOH 53 823  823  HOH TIP A . 
C 2 HOH 54 825  825  HOH TIP A . 
C 2 HOH 55 829  829  HOH TIP A . 
C 2 HOH 56 831  831  HOH TIP A . 
C 2 HOH 57 837  837  HOH TIP A . 
C 2 HOH 58 840  840  HOH TIP A . 
C 2 HOH 59 841  841  HOH TIP A . 
C 2 HOH 60 846  846  HOH TIP A . 
C 2 HOH 61 854  854  HOH TIP A . 
C 2 HOH 62 864  864  HOH TIP A . 
C 2 HOH 63 869  869  HOH TIP A . 
C 2 HOH 64 874  874  HOH TIP A . 
C 2 HOH 65 883  883  HOH TIP A . 
C 2 HOH 66 884  884  HOH TIP A . 
C 2 HOH 67 885  885  HOH TIP A . 
C 2 HOH 68 891  891  HOH TIP A . 
C 2 HOH 69 892  892  HOH TIP A . 
C 2 HOH 70 896  896  HOH TIP A . 
C 2 HOH 71 898  898  HOH TIP A . 
C 2 HOH 72 899  899  HOH TIP A . 
C 2 HOH 73 900  900  HOH TIP A . 
C 2 HOH 74 901  901  HOH TIP A . 
C 2 HOH 75 903  903  HOH TIP A . 
C 2 HOH 76 906  906  HOH TIP A . 
C 2 HOH 77 907  907  HOH TIP A . 
C 2 HOH 78 908  908  HOH TIP A . 
C 2 HOH 79 909  909  HOH TIP A . 
C 2 HOH 80 911  911  HOH TIP A . 
C 2 HOH 81 913  913  HOH TIP A . 
C 2 HOH 82 915  915  HOH TIP A . 
C 2 HOH 83 916  916  HOH TIP A . 
C 2 HOH 84 1001 1001 HOH TIP A . 
D 2 HOH 1  700  700  HOH TIP B . 
D 2 HOH 2  703  703  HOH TIP B . 
D 2 HOH 3  706  706  HOH TIP B . 
D 2 HOH 4  713  713  HOH TIP B . 
D 2 HOH 5  717  717  HOH TIP B . 
D 2 HOH 6  719  719  HOH TIP B . 
D 2 HOH 7  720  720  HOH TIP B . 
D 2 HOH 8  726  726  HOH TIP B . 
D 2 HOH 9  728  728  HOH TIP B . 
D 2 HOH 10 731  731  HOH TIP B . 
D 2 HOH 11 733  733  HOH TIP B . 
D 2 HOH 12 736  736  HOH TIP B . 
D 2 HOH 13 738  738  HOH TIP B . 
D 2 HOH 14 742  742  HOH TIP B . 
D 2 HOH 15 743  743  HOH TIP B . 
D 2 HOH 16 747  747  HOH TIP B . 
D 2 HOH 17 749  749  HOH TIP B . 
D 2 HOH 18 750  750  HOH TIP B . 
D 2 HOH 19 763  763  HOH TIP B . 
D 2 HOH 20 775  775  HOH TIP B . 
D 2 HOH 21 777  777  HOH TIP B . 
D 2 HOH 22 778  778  HOH TIP B . 
D 2 HOH 23 781  781  HOH TIP B . 
D 2 HOH 24 782  782  HOH TIP B . 
D 2 HOH 25 787  787  HOH TIP B . 
D 2 HOH 26 794  794  HOH TIP B . 
D 2 HOH 27 798  798  HOH TIP B . 
D 2 HOH 28 799  799  HOH TIP B . 
D 2 HOH 29 801  801  HOH TIP B . 
D 2 HOH 30 803  803  HOH TIP B . 
D 2 HOH 31 804  804  HOH TIP B . 
D 2 HOH 32 805  805  HOH TIP B . 
D 2 HOH 33 811  811  HOH TIP B . 
D 2 HOH 34 815  815  HOH TIP B . 
D 2 HOH 35 822  822  HOH TIP B . 
D 2 HOH 36 828  828  HOH TIP B . 
D 2 HOH 37 830  830  HOH TIP B . 
D 2 HOH 38 839  839  HOH TIP B . 
D 2 HOH 39 842  842  HOH TIP B . 
D 2 HOH 40 850  850  HOH TIP B . 
D 2 HOH 41 860  860  HOH TIP B . 
D 2 HOH 42 863  863  HOH TIP B . 
D 2 HOH 43 867  867  HOH TIP B . 
D 2 HOH 44 872  872  HOH TIP B . 
D 2 HOH 45 873  873  HOH TIP B . 
D 2 HOH 46 878  878  HOH TIP B . 
D 2 HOH 47 882  882  HOH TIP B . 
D 2 HOH 48 886  886  HOH TIP B . 
D 2 HOH 49 887  887  HOH TIP B . 
D 2 HOH 50 888  888  HOH TIP B . 
D 2 HOH 51 889  889  HOH TIP B . 
D 2 HOH 52 890  890  HOH TIP B . 
D 2 HOH 53 893  893  HOH TIP B . 
D 2 HOH 54 894  894  HOH TIP B . 
D 2 HOH 55 895  895  HOH TIP B . 
D 2 HOH 56 897  897  HOH TIP B . 
D 2 HOH 57 904  904  HOH TIP B . 
D 2 HOH 58 905  905  HOH TIP B . 
D 2 HOH 59 910  910  HOH TIP B . 
D 2 HOH 60 917  917  HOH TIP B . 
D 2 HOH 61 918  918  HOH TIP B . 
D 2 HOH 62 919  919  HOH TIP B . 
# 
loop_
_pdbx_unobs_or_zero_occ_atoms.id 
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num 
_pdbx_unobs_or_zero_occ_atoms.polymer_flag 
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag 
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id 
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id 
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id 
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code 
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id 
_pdbx_unobs_or_zero_occ_atoms.label_alt_id 
_pdbx_unobs_or_zero_occ_atoms.label_asym_id 
_pdbx_unobs_or_zero_occ_atoms.label_comp_id 
_pdbx_unobs_or_zero_occ_atoms.label_seq_id 
_pdbx_unobs_or_zero_occ_atoms.label_atom_id 
1 1 Y 1 A SMT 6 ? CB ? A SMT 6 CB 
2 1 Y 1 A SMT 6 ? SC ? A SMT 6 SC 
3 1 Y 1 A SMT 6 ? CD ? A SMT 6 CD 
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
XDS       'data scaling'   . ? 1 
SCALEPACK 'data scaling'   . ? 2 
AMoRE     phasing          . ? 3 
SHELXL-97 refinement       . ? 4 
XDS       'data reduction' . ? 5 
# 
_cell.entry_id           1MLX 
_cell.length_a           24.728 
_cell.length_b           44.473 
_cell.length_c           46.229 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1MLX 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.Int_Tables_number                19 
_symmetry.cell_setting                     ? 
# 
_exptl.entry_id          1MLX 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_percent_sol   36.84 
_exptl_crystal.density_Matthews      1.95 
_exptl_crystal.description           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          'VAPOR DIFFUSION, HANGING DROP' 
_exptl_crystal_grow.temp            293 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.0 
_exptl_crystal_grow.pdbx_details    
;sodium cacodylate, potassium chloride, spermine tetrahydrochloride, 2-methyl-2,4-pentanediol (MPD), pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
;
_exptl_crystal_grow.pdbx_pH_range   . 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.details 
1 1 1 'sodium cacodylate'           ? ? ? 
1 2 1 KCl                           ? ? ? 
1 3 1 'spermine tetrahydrochloride' ? ? ? 
1 4 1 MPD                           ? ? ? 
1 5 2 KCl                           ? ? ? 
1 6 2 MPD                           ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           110 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   MARRESEARCH 
_diffrn_detector.pdbx_collection_date   1999-12-17 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    graphite 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   1.0000 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'APS BEAMLINE 5ID-B' 
_diffrn_source.pdbx_synchrotron_site       APS 
_diffrn_source.pdbx_synchrotron_beamline   5ID-B 
_diffrn_source.pdbx_wavelength             ? 
_diffrn_source.pdbx_wavelength_list        1.0000 
# 
_reflns.entry_id                     1MLX 
_reflns.observed_criterion_sigma_F   4.0 
_reflns.observed_criterion_sigma_I   2.0 
_reflns.d_resolution_high            1.25 
_reflns.d_resolution_low             20.0 
_reflns.number_all                   14088 
_reflns.number_obs                   12796 
_reflns.percent_possible_obs         95.9 
_reflns.pdbx_Rmerge_I_obs            0.03 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        ? 
_reflns.B_iso_Wilson_estimate        ? 
_reflns.pdbx_redundancy              ? 
_reflns.R_free_details               ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             1.25 
_reflns_shell.d_res_low              1.29 
_reflns_shell.percent_possible_all   93.6 
_reflns_shell.Rmerge_I_obs           0.313 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    ? 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      1341 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1MLX 
_refine.ls_d_res_high                            1.25 
_refine.ls_d_res_low                             15.0 
_refine.pdbx_ls_sigma_F                          4.0 
_refine.pdbx_ls_sigma_I                          2.0 
_refine.ls_number_reflns_all                     14054 
_refine.ls_number_reflns_obs                     12784 
_refine.ls_number_reflns_R_free                  ? 
_refine.ls_percent_reflns_obs                    ? 
_refine.ls_R_factor_all                          0.141 
_refine.ls_R_factor_obs                          0.137 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.ls_percent_reflns_R_free                 ? 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_ls_cross_valid_method               ? 
_refine.pdbx_R_Free_selection_details            ? 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_stereochemistry_target_values       ? 
_refine.solvent_model_details                    ? 
_refine.solvent_model_param_bsol                 ? 
_refine.solvent_model_param_ksol                 ? 
_refine.occupancy_max                            ? 
_refine.occupancy_min                            ? 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.details                                  ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   635 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             146 
_refine_hist.number_atoms_total               781 
_refine_hist.d_res_high                       1.25 
_refine_hist.d_res_low                        15.0 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d  0.029 ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d 0.034 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   ? 
_refine_ls_shell.d_res_high                       1.25 
_refine_ls_shell.d_res_low                        ? 
_refine_ls_shell.number_reflns_R_work             ? 
_refine_ls_shell.R_factor_R_work                  0.141 
_refine_ls_shell.percent_reflns_obs               ? 
_refine_ls_shell.R_factor_R_free                  ? 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             ? 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
# 
_database_PDB_matrix.entry_id          1MLX 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.00000 
_database_PDB_matrix.origx_vector[2]   0.00000 
_database_PDB_matrix.origx_vector[3]   0.00000 
# 
_struct.entry_id                  1MLX 
_struct.title                     
;Crystal Structure Analysis of a 2'-O-[2-(Methylthio)-ethyl]-Modified Oligodeoxynucleotide Duplex
;
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        1MLX 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            
;DNA, DOUBLE HELIX, A-FORM, ANTISENSE MODIFICATION, NUCLEIC ACID ANALOGUE, RNA AFFINITY, NUCLEASE RESISTANCE, PROTEIN BINDING AFFINITY, HIGH RESOLUTION STRUCTURE, HYDRATION
;
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1MLX 
_struct_ref.pdbx_db_accession          1MLX 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 1MLX A 1 ? 10 ? 1MLX 1   ? 10  ? 1   10  
2 1 1MLX B 1 ? 10 ? 1MLX 111 ? 120 ? 111 120 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
covale1  covale both ? A DA  5  "O3'" ? ? ? 1_555 A SMT 6  P  ? ? A DA  5   A SMT 6   1_555 ? ? ? ? ? ? ?            1.614 ? ? 
covale2  covale both ? A SMT 6  "O3'" ? ? ? 1_555 A DA  7  P  ? ? A SMT 6   A DA  7   1_555 ? ? ? ? ? ? ?            1.606 ? ? 
covale3  covale both ? B DA  5  "O3'" ? ? ? 1_555 B SMT 6  P  ? ? B DA  115 B SMT 116 1_555 ? ? ? ? ? ? ?            1.595 ? ? 
covale4  covale both ? B SMT 6  "O3'" ? ? ? 1_555 B DA  7  P  ? ? B SMT 116 B DA  117 1_555 ? ? ? ? ? ? ?            1.619 ? ? 
hydrog1  hydrog ?    ? A DG  1  N1    ? ? ? 1_555 B DC  10 N3 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ?    ? A DG  1  N2    ? ? ? 1_555 B DC  10 O2 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ?    ? A DG  1  O6    ? ? ? 1_555 B DC  10 N4 ? ? A DG  1   B DC  120 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ?    ? A DC  2  N3    ? ? ? 1_555 B DG  9  N1 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ?    ? A DC  2  N4    ? ? ? 1_555 B DG  9  O6 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ?    ? A DC  2  O2    ? ? ? 1_555 B DG  9  N2 ? ? A DC  2   B DG  119 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ?    ? A DG  3  N1    ? ? ? 1_555 B DC  8  N3 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ?    ? A DG  3  N2    ? ? ? 1_555 B DC  8  O2 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ?    ? A DG  3  O6    ? ? ? 1_555 B DC  8  N4 ? ? A DG  3   B DC  118 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ?    ? A DT  4  N3    ? ? ? 1_555 B DA  7  N1 ? ? A DT  4   B DA  117 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ?    ? A DT  4  O4    ? ? ? 1_555 B DA  7  N6 ? ? A DT  4   B DA  117 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ?    ? A DA  5  N1    ? ? ? 1_555 B SMT 6  N3 ? ? A DA  5   B SMT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ?    ? A DA  5  N6    ? ? ? 1_555 B SMT 6  O4 ? ? A DA  5   B SMT 116 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ?    ? A SMT 6  N3    ? ? ? 1_555 B DA  5  N1 ? ? A SMT 6   B DA  115 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ?    ? A SMT 6  O4    ? ? ? 1_555 B DA  5  N6 ? ? A SMT 6   B DA  115 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ?    ? A DA  7  N1    ? ? ? 1_555 B DT  4  N3 ? ? A DA  7   B DT  114 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ?    ? A DA  7  N6    ? ? ? 1_555 B DT  4  O4 ? ? A DA  7   B DT  114 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ?    ? A DC  8  N3    ? ? ? 1_555 B DG  3  N1 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog19 hydrog ?    ? A DC  8  N4    ? ? ? 1_555 B DG  3  O6 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog20 hydrog ?    ? A DC  8  O2    ? ? ? 1_555 B DG  3  N2 ? ? A DC  8   B DG  113 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog21 hydrog ?    ? A DG  9  N1    ? ? ? 1_555 B DC  2  N3 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog22 hydrog ?    ? A DG  9  N2    ? ? ? 1_555 B DC  2  O2 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog23 hydrog ?    ? A DG  9  O6    ? ? ? 1_555 B DC  2  N4 ? ? A DG  9   B DC  112 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog24 hydrog ?    ? A DC  10 N3    ? ? ? 1_555 B DG  1  N1 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog25 hydrog ?    ? A DC  10 N4    ? ? ? 1_555 B DG  1  O6 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog26 hydrog ?    ? A DC  10 O2    ? ? ? 1_555 B DG  1  N2 ? ? A DC  10  B DG  111 1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
covale ? ? 
hydrog ? ? 
# 
loop_
_pdbx_validate_close_contact.id 
_pdbx_validate_close_contact.PDB_model_num 
_pdbx_validate_close_contact.auth_atom_id_1 
_pdbx_validate_close_contact.auth_asym_id_1 
_pdbx_validate_close_contact.auth_comp_id_1 
_pdbx_validate_close_contact.auth_seq_id_1 
_pdbx_validate_close_contact.PDB_ins_code_1 
_pdbx_validate_close_contact.label_alt_id_1 
_pdbx_validate_close_contact.auth_atom_id_2 
_pdbx_validate_close_contact.auth_asym_id_2 
_pdbx_validate_close_contact.auth_comp_id_2 
_pdbx_validate_close_contact.auth_seq_id_2 
_pdbx_validate_close_contact.PDB_ins_code_2 
_pdbx_validate_close_contact.label_alt_id_2 
_pdbx_validate_close_contact.dist 
1 1 O A HOH 793 ? ? O A HOH 864 ? ? 1.96 
2 1 O B HOH 775 ? ? O B HOH 822 ? ? 2.09 
3 1 O B HOH 777 ? ? O B HOH 863 ? ? 2.15 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1  1 C4    A DC 2   ? ? C5    A DC 2   ? ? 1.475 1.425 0.050  0.008 N 
2  1 "O4'" A DG 3   ? ? "C1'" A DG 3   ? ? 1.502 1.420 0.082  0.011 N 
3  1 C5    A DT 4   ? ? C7    A DT 4   ? ? 1.449 1.496 -0.047 0.006 N 
4  1 N1    A DA 5   ? ? C2    A DA 5   ? ? 1.398 1.339 0.059  0.009 N 
5  1 C6    A DA 7   ? ? N1    A DA 7   ? ? 1.307 1.351 -0.044 0.007 N 
6  1 C4    A DC 8   ? ? N4    A DC 8   ? ? 1.275 1.335 -0.060 0.009 N 
7  1 C5    A DC 8   ? ? C6    A DC 8   ? ? 1.275 1.339 -0.064 0.008 N 
8  1 C6    A DG 9   ? ? N1    A DG 9   ? ? 1.439 1.391 0.048  0.007 N 
9  1 C2    A DC 10  ? ? O2    A DC 10  ? ? 1.184 1.240 -0.056 0.009 N 
10 1 C2    A DC 10  ? ? N3    A DC 10  ? ? 1.403 1.353 0.050  0.008 N 
11 1 N3    B DG 111 ? ? C4    B DG 111 ? ? 1.304 1.350 -0.046 0.007 N 
12 1 C8    B DG 111 ? ? N9    B DG 111 ? ? 1.436 1.374 0.062  0.007 N 
13 1 C2    B DG 113 ? ? N3    B DG 113 ? ? 1.275 1.323 -0.048 0.008 N 
14 1 C5    B DT 114 ? ? C6    B DT 114 ? ? 1.270 1.339 -0.069 0.007 N 
15 1 N1    B DA 115 ? ? C2    B DA 115 ? ? 1.269 1.339 -0.070 0.009 N 
16 1 C6    B DA 117 ? ? N1    B DA 117 ? ? 1.397 1.351 0.046  0.007 N 
17 1 N7    B DA 117 ? ? C8    B DA 117 ? ? 1.357 1.311 0.046  0.007 N 
18 1 "C2'" B DG 119 ? ? "C1'" B DG 119 ? ? 1.451 1.518 -0.067 0.010 N 
19 1 C5    B DG 119 ? ? N7    B DG 119 ? ? 1.427 1.388 0.039  0.006 N 
20 1 C4    B DC 120 ? ? C5    B DC 120 ? ? 1.475 1.425 0.050  0.008 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1  1 C6    A DG 1   ? ? N1    A DG 1   ? ? C2    A DG 1   ? ? 120.35 125.10 -4.75 0.60 N 
2  1 N1    A DG 1   ? ? C2    A DG 1   ? ? N3    A DG 1   ? ? 128.25 123.90 4.35  0.60 N 
3  1 N3    A DG 1   ? ? C4    A DG 1   ? ? C5    A DG 1   ? ? 125.42 128.60 -3.18 0.50 N 
4  1 C5    A DG 1   ? ? N7    A DG 1   ? ? C8    A DG 1   ? ? 100.45 104.30 -3.85 0.50 N 
5  1 N7    A DG 1   ? ? C8    A DG 1   ? ? N9    A DG 1   ? ? 116.52 113.10 3.42  0.50 N 
6  1 "C3'" A DG 1   ? ? "O3'" A DG 1   ? ? P     A DC 2   ? ? 128.19 119.70 8.49  1.20 Y 
7  1 "O4'" A DG 3   ? ? "C1'" A DG 3   ? ? N9    A DG 3   ? ? 103.77 108.00 -4.23 0.70 N 
8  1 C6    A DG 3   ? ? N1    A DG 3   ? ? C2    A DG 3   ? ? 120.35 125.10 -4.75 0.60 N 
9  1 N1    A DG 3   ? ? C2    A DG 3   ? ? N3    A DG 3   ? ? 129.85 123.90 5.95  0.60 N 
10 1 C2    A DG 3   ? ? N3    A DG 3   ? ? C4    A DG 3   ? ? 108.29 111.90 -3.61 0.50 N 
11 1 N7    A DG 3   ? ? C8    A DG 3   ? ? N9    A DG 3   ? ? 109.67 113.10 -3.43 0.50 N 
12 1 C8    A DG 3   ? ? N9    A DG 3   ? ? C4    A DG 3   ? ? 109.19 106.40 2.79  0.40 N 
13 1 N1    A DA 5   ? ? C2    A DA 5   ? ? N3    A DA 5   ? ? 124.69 129.30 -4.61 0.50 N 
14 1 C5    A DA 5   ? ? N7    A DA 5   ? ? C8    A DA 5   ? ? 107.06 103.90 3.16  0.50 N 
15 1 N7    A DA 5   ? ? C8    A DA 5   ? ? N9    A DA 5   ? ? 110.53 113.80 -3.27 0.50 N 
16 1 C6    A DA 7   ? ? N1    A DA 7   ? ? C2    A DA 7   ? ? 122.37 118.60 3.77  0.60 N 
17 1 "O4'" A DC 8   ? ? "C4'" A DC 8   ? ? "C3'" A DC 8   ? ? 100.80 104.50 -3.70 0.40 N 
18 1 "O4'" A DG 9   ? ? "C1'" A DG 9   ? ? "C2'" A DG 9   ? ? 109.80 106.80 3.00  0.50 N 
19 1 C6    A DG 9   ? ? N1    A DG 9   ? ? C2    A DG 9   ? ? 119.05 125.10 -6.05 0.60 N 
20 1 N1    A DG 9   ? ? C2    A DG 9   ? ? N3    A DG 9   ? ? 131.75 123.90 7.85  0.60 N 
21 1 N3    A DG 9   ? ? C2    A DG 9   ? ? N2    A DG 9   ? ? 114.08 119.90 -5.82 0.70 N 
22 1 N1    A DG 9   ? ? C6    A DG 9   ? ? O6    A DG 9   ? ? 115.14 119.90 -4.76 0.60 N 
23 1 C5    A DG 9   ? ? C6    A DG 9   ? ? O6    A DG 9   ? ? 132.20 128.60 3.60  0.60 N 
24 1 "O4'" B DG 111 ? ? "C1'" B DG 111 ? ? N9    B DG 111 ? ? 103.22 108.00 -4.78 0.70 N 
25 1 N1    B DG 111 ? ? C2    B DG 111 ? ? N3    B DG 111 ? ? 119.79 123.90 -4.11 0.60 N 
26 1 C2    B DG 111 ? ? N3    B DG 111 ? ? C4    B DG 111 ? ? 116.88 111.90 4.98  0.50 N 
27 1 C6    B DG 111 ? ? C5    B DG 111 ? ? N7    B DG 111 ? ? 126.64 130.40 -3.76 0.60 N 
28 1 C6    B DC 112 ? ? N1    B DC 112 ? ? C2    B DC 112 ? ? 114.61 120.30 -5.69 0.40 N 
29 1 C4    B DC 112 ? ? C5    B DC 112 ? ? C6    B DC 112 ? ? 113.34 117.40 -4.06 0.50 N 
30 1 C5    B DC 112 ? ? C6    B DC 112 ? ? N1    B DC 112 ? ? 127.10 121.00 6.10  0.50 N 
31 1 "O4'" B DG 113 ? ? "C4'" B DG 113 ? ? "C3'" B DG 113 ? ? 101.43 104.50 -3.07 0.40 N 
32 1 N7    B DG 113 ? ? C8    B DG 113 ? ? N9    B DG 113 ? ? 116.56 113.10 3.46  0.50 N 
33 1 C8    B DG 113 ? ? N9    B DG 113 ? ? C4    B DG 113 ? ? 103.66 106.40 -2.74 0.40 N 
34 1 "O4'" B DT 114 ? ? "C4'" B DT 114 ? ? "C3'" B DT 114 ? ? 101.69 104.50 -2.81 0.40 N 
35 1 C5    B DT 114 ? ? C6    B DT 114 ? ? N1    B DT 114 ? ? 128.26 123.70 4.56  0.60 N 
36 1 C8    B DA 117 ? ? N9    B DA 117 ? ? C4    B DA 117 ? ? 108.82 105.80 3.02  0.40 N 
37 1 N9    B DA 117 ? ? C4    B DA 117 ? ? C5    B DA 117 ? ? 103.36 105.80 -2.44 0.40 N 
38 1 P     B DG 119 ? ? "O5'" B DG 119 ? ? "C5'" B DG 119 ? ? 131.54 120.90 10.64 1.60 N 
# 
loop_
_pdbx_struct_mod_residue.id 
_pdbx_struct_mod_residue.label_asym_id 
_pdbx_struct_mod_residue.label_comp_id 
_pdbx_struct_mod_residue.label_seq_id 
_pdbx_struct_mod_residue.auth_asym_id 
_pdbx_struct_mod_residue.auth_comp_id 
_pdbx_struct_mod_residue.auth_seq_id 
_pdbx_struct_mod_residue.PDB_ins_code 
_pdbx_struct_mod_residue.parent_comp_id 
_pdbx_struct_mod_residue.details 
1 A SMT 6 A SMT 6   ? T ? 
2 B SMT 6 B SMT 116 ? T ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA  OP3    O N N 1   
DA  P      P N N 2   
DA  OP1    O N N 3   
DA  OP2    O N N 4   
DA  "O5'"  O N N 5   
DA  "C5'"  C N N 6   
DA  "C4'"  C N R 7   
DA  "O4'"  O N N 8   
DA  "C3'"  C N S 9   
DA  "O3'"  O N N 10  
DA  "C2'"  C N N 11  
DA  "C1'"  C N R 12  
DA  N9     N Y N 13  
DA  C8     C Y N 14  
DA  N7     N Y N 15  
DA  C5     C Y N 16  
DA  C6     C Y N 17  
DA  N6     N N N 18  
DA  N1     N Y N 19  
DA  C2     C Y N 20  
DA  N3     N Y N 21  
DA  C4     C Y N 22  
DA  HOP3   H N N 23  
DA  HOP2   H N N 24  
DA  "H5'"  H N N 25  
DA  "H5''" H N N 26  
DA  "H4'"  H N N 27  
DA  "H3'"  H N N 28  
DA  "HO3'" H N N 29  
DA  "H2'"  H N N 30  
DA  "H2''" H N N 31  
DA  "H1'"  H N N 32  
DA  H8     H N N 33  
DA  H61    H N N 34  
DA  H62    H N N 35  
DA  H2     H N N 36  
DC  OP3    O N N 37  
DC  P      P N N 38  
DC  OP1    O N N 39  
DC  OP2    O N N 40  
DC  "O5'"  O N N 41  
DC  "C5'"  C N N 42  
DC  "C4'"  C N R 43  
DC  "O4'"  O N N 44  
DC  "C3'"  C N S 45  
DC  "O3'"  O N N 46  
DC  "C2'"  C N N 47  
DC  "C1'"  C N R 48  
DC  N1     N N N 49  
DC  C2     C N N 50  
DC  O2     O N N 51  
DC  N3     N N N 52  
DC  C4     C N N 53  
DC  N4     N N N 54  
DC  C5     C N N 55  
DC  C6     C N N 56  
DC  HOP3   H N N 57  
DC  HOP2   H N N 58  
DC  "H5'"  H N N 59  
DC  "H5''" H N N 60  
DC  "H4'"  H N N 61  
DC  "H3'"  H N N 62  
DC  "HO3'" H N N 63  
DC  "H2'"  H N N 64  
DC  "H2''" H N N 65  
DC  "H1'"  H N N 66  
DC  H41    H N N 67  
DC  H42    H N N 68  
DC  H5     H N N 69  
DC  H6     H N N 70  
DG  OP3    O N N 71  
DG  P      P N N 72  
DG  OP1    O N N 73  
DG  OP2    O N N 74  
DG  "O5'"  O N N 75  
DG  "C5'"  C N N 76  
DG  "C4'"  C N R 77  
DG  "O4'"  O N N 78  
DG  "C3'"  C N S 79  
DG  "O3'"  O N N 80  
DG  "C2'"  C N N 81  
DG  "C1'"  C N R 82  
DG  N9     N Y N 83  
DG  C8     C Y N 84  
DG  N7     N Y N 85  
DG  C5     C Y N 86  
DG  C6     C N N 87  
DG  O6     O N N 88  
DG  N1     N N N 89  
DG  C2     C N N 90  
DG  N2     N N N 91  
DG  N3     N N N 92  
DG  C4     C Y N 93  
DG  HOP3   H N N 94  
DG  HOP2   H N N 95  
DG  "H5'"  H N N 96  
DG  "H5''" H N N 97  
DG  "H4'"  H N N 98  
DG  "H3'"  H N N 99  
DG  "HO3'" H N N 100 
DG  "H2'"  H N N 101 
DG  "H2''" H N N 102 
DG  "H1'"  H N N 103 
DG  H8     H N N 104 
DG  H1     H N N 105 
DG  H21    H N N 106 
DG  H22    H N N 107 
DT  OP3    O N N 108 
DT  P      P N N 109 
DT  OP1    O N N 110 
DT  OP2    O N N 111 
DT  "O5'"  O N N 112 
DT  "C5'"  C N N 113 
DT  "C4'"  C N R 114 
DT  "O4'"  O N N 115 
DT  "C3'"  C N S 116 
DT  "O3'"  O N N 117 
DT  "C2'"  C N N 118 
DT  "C1'"  C N R 119 
DT  N1     N N N 120 
DT  C2     C N N 121 
DT  O2     O N N 122 
DT  N3     N N N 123 
DT  C4     C N N 124 
DT  O4     O N N 125 
DT  C5     C N N 126 
DT  C7     C N N 127 
DT  C6     C N N 128 
DT  HOP3   H N N 129 
DT  HOP2   H N N 130 
DT  "H5'"  H N N 131 
DT  "H5''" H N N 132 
DT  "H4'"  H N N 133 
DT  "H3'"  H N N 134 
DT  "HO3'" H N N 135 
DT  "H2'"  H N N 136 
DT  "H2''" H N N 137 
DT  "H1'"  H N N 138 
DT  H3     H N N 139 
DT  H71    H N N 140 
DT  H72    H N N 141 
DT  H73    H N N 142 
DT  H6     H N N 143 
HOH O      O N N 144 
HOH H1     H N N 145 
HOH H2     H N N 146 
SMT P      P N N 147 
SMT OP1    O N N 148 
SMT OP2    O N N 149 
SMT OP3    O N N 150 
SMT "O5'"  O N N 151 
SMT "C5'"  C N N 152 
SMT "C4'"  C N R 153 
SMT "O4'"  O N N 154 
SMT "C3'"  C N R 155 
SMT "O3'"  O N N 156 
SMT "C2'"  C N R 157 
SMT "O2'"  O N N 158 
SMT "C1'"  C N R 159 
SMT N1     N N N 160 
SMT C2     C N N 161 
SMT O2     O N N 162 
SMT N3     N N N 163 
SMT C4     C N N 164 
SMT O4     O N N 165 
SMT C5     C N N 166 
SMT C5A    C N N 167 
SMT C6     C N N 168 
SMT "CA'"  C N N 169 
SMT CB     C N N 170 
SMT SC     S N N 171 
SMT CD     C N N 172 
SMT H2P    H N N 173 
SMT H3P    H N N 174 
SMT "H5'"  H N N 175 
SMT "H5'2" H N N 176 
SMT "H4'"  H N N 177 
SMT "H3'"  H N N 178 
SMT HO3    H N N 179 
SMT "H2'"  H N N 180 
SMT "H1'"  H N N 181 
SMT H3     H N N 182 
SMT H5A    H N N 183 
SMT H5A1   H N N 184 
SMT H5A2   H N N 185 
SMT H6     H N N 186 
SMT HA1    H N N 187 
SMT HA2    H N N 188 
SMT HB1    H N N 189 
SMT HB2    H N N 190 
SMT HD1    H N N 191 
SMT HD2    H N N 192 
SMT HD3    H N N 193 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA  OP3   P      sing N N 1   
DA  OP3   HOP3   sing N N 2   
DA  P     OP1    doub N N 3   
DA  P     OP2    sing N N 4   
DA  P     "O5'"  sing N N 5   
DA  OP2   HOP2   sing N N 6   
DA  "O5'" "C5'"  sing N N 7   
DA  "C5'" "C4'"  sing N N 8   
DA  "C5'" "H5'"  sing N N 9   
DA  "C5'" "H5''" sing N N 10  
DA  "C4'" "O4'"  sing N N 11  
DA  "C4'" "C3'"  sing N N 12  
DA  "C4'" "H4'"  sing N N 13  
DA  "O4'" "C1'"  sing N N 14  
DA  "C3'" "O3'"  sing N N 15  
DA  "C3'" "C2'"  sing N N 16  
DA  "C3'" "H3'"  sing N N 17  
DA  "O3'" "HO3'" sing N N 18  
DA  "C2'" "C1'"  sing N N 19  
DA  "C2'" "H2'"  sing N N 20  
DA  "C2'" "H2''" sing N N 21  
DA  "C1'" N9     sing N N 22  
DA  "C1'" "H1'"  sing N N 23  
DA  N9    C8     sing Y N 24  
DA  N9    C4     sing Y N 25  
DA  C8    N7     doub Y N 26  
DA  C8    H8     sing N N 27  
DA  N7    C5     sing Y N 28  
DA  C5    C6     sing Y N 29  
DA  C5    C4     doub Y N 30  
DA  C6    N6     sing N N 31  
DA  C6    N1     doub Y N 32  
DA  N6    H61    sing N N 33  
DA  N6    H62    sing N N 34  
DA  N1    C2     sing Y N 35  
DA  C2    N3     doub Y N 36  
DA  C2    H2     sing N N 37  
DA  N3    C4     sing Y N 38  
DC  OP3   P      sing N N 39  
DC  OP3   HOP3   sing N N 40  
DC  P     OP1    doub N N 41  
DC  P     OP2    sing N N 42  
DC  P     "O5'"  sing N N 43  
DC  OP2   HOP2   sing N N 44  
DC  "O5'" "C5'"  sing N N 45  
DC  "C5'" "C4'"  sing N N 46  
DC  "C5'" "H5'"  sing N N 47  
DC  "C5'" "H5''" sing N N 48  
DC  "C4'" "O4'"  sing N N 49  
DC  "C4'" "C3'"  sing N N 50  
DC  "C4'" "H4'"  sing N N 51  
DC  "O4'" "C1'"  sing N N 52  
DC  "C3'" "O3'"  sing N N 53  
DC  "C3'" "C2'"  sing N N 54  
DC  "C3'" "H3'"  sing N N 55  
DC  "O3'" "HO3'" sing N N 56  
DC  "C2'" "C1'"  sing N N 57  
DC  "C2'" "H2'"  sing N N 58  
DC  "C2'" "H2''" sing N N 59  
DC  "C1'" N1     sing N N 60  
DC  "C1'" "H1'"  sing N N 61  
DC  N1    C2     sing N N 62  
DC  N1    C6     sing N N 63  
DC  C2    O2     doub N N 64  
DC  C2    N3     sing N N 65  
DC  N3    C4     doub N N 66  
DC  C4    N4     sing N N 67  
DC  C4    C5     sing N N 68  
DC  N4    H41    sing N N 69  
DC  N4    H42    sing N N 70  
DC  C5    C6     doub N N 71  
DC  C5    H5     sing N N 72  
DC  C6    H6     sing N N 73  
DG  OP3   P      sing N N 74  
DG  OP3   HOP3   sing N N 75  
DG  P     OP1    doub N N 76  
DG  P     OP2    sing N N 77  
DG  P     "O5'"  sing N N 78  
DG  OP2   HOP2   sing N N 79  
DG  "O5'" "C5'"  sing N N 80  
DG  "C5'" "C4'"  sing N N 81  
DG  "C5'" "H5'"  sing N N 82  
DG  "C5'" "H5''" sing N N 83  
DG  "C4'" "O4'"  sing N N 84  
DG  "C4'" "C3'"  sing N N 85  
DG  "C4'" "H4'"  sing N N 86  
DG  "O4'" "C1'"  sing N N 87  
DG  "C3'" "O3'"  sing N N 88  
DG  "C3'" "C2'"  sing N N 89  
DG  "C3'" "H3'"  sing N N 90  
DG  "O3'" "HO3'" sing N N 91  
DG  "C2'" "C1'"  sing N N 92  
DG  "C2'" "H2'"  sing N N 93  
DG  "C2'" "H2''" sing N N 94  
DG  "C1'" N9     sing N N 95  
DG  "C1'" "H1'"  sing N N 96  
DG  N9    C8     sing Y N 97  
DG  N9    C4     sing Y N 98  
DG  C8    N7     doub Y N 99  
DG  C8    H8     sing N N 100 
DG  N7    C5     sing Y N 101 
DG  C5    C6     sing N N 102 
DG  C5    C4     doub Y N 103 
DG  C6    O6     doub N N 104 
DG  C6    N1     sing N N 105 
DG  N1    C2     sing N N 106 
DG  N1    H1     sing N N 107 
DG  C2    N2     sing N N 108 
DG  C2    N3     doub N N 109 
DG  N2    H21    sing N N 110 
DG  N2    H22    sing N N 111 
DG  N3    C4     sing N N 112 
DT  OP3   P      sing N N 113 
DT  OP3   HOP3   sing N N 114 
DT  P     OP1    doub N N 115 
DT  P     OP2    sing N N 116 
DT  P     "O5'"  sing N N 117 
DT  OP2   HOP2   sing N N 118 
DT  "O5'" "C5'"  sing N N 119 
DT  "C5'" "C4'"  sing N N 120 
DT  "C5'" "H5'"  sing N N 121 
DT  "C5'" "H5''" sing N N 122 
DT  "C4'" "O4'"  sing N N 123 
DT  "C4'" "C3'"  sing N N 124 
DT  "C4'" "H4'"  sing N N 125 
DT  "O4'" "C1'"  sing N N 126 
DT  "C3'" "O3'"  sing N N 127 
DT  "C3'" "C2'"  sing N N 128 
DT  "C3'" "H3'"  sing N N 129 
DT  "O3'" "HO3'" sing N N 130 
DT  "C2'" "C1'"  sing N N 131 
DT  "C2'" "H2'"  sing N N 132 
DT  "C2'" "H2''" sing N N 133 
DT  "C1'" N1     sing N N 134 
DT  "C1'" "H1'"  sing N N 135 
DT  N1    C2     sing N N 136 
DT  N1    C6     sing N N 137 
DT  C2    O2     doub N N 138 
DT  C2    N3     sing N N 139 
DT  N3    C4     sing N N 140 
DT  N3    H3     sing N N 141 
DT  C4    O4     doub N N 142 
DT  C4    C5     sing N N 143 
DT  C5    C7     sing N N 144 
DT  C5    C6     doub N N 145 
DT  C7    H71    sing N N 146 
DT  C7    H72    sing N N 147 
DT  C7    H73    sing N N 148 
DT  C6    H6     sing N N 149 
HOH O     H1     sing N N 150 
HOH O     H2     sing N N 151 
SMT P     OP1    doub N N 152 
SMT P     OP2    sing N N 153 
SMT P     OP3    sing N N 154 
SMT P     "O5'"  sing N N 155 
SMT OP2   H2P    sing N N 156 
SMT OP3   H3P    sing N N 157 
SMT "O5'" "C5'"  sing N N 158 
SMT "C5'" "C4'"  sing N N 159 
SMT "C5'" "H5'"  sing N N 160 
SMT "C5'" "H5'2" sing N N 161 
SMT "C4'" "O4'"  sing N N 162 
SMT "C4'" "C3'"  sing N N 163 
SMT "C4'" "H4'"  sing N N 164 
SMT "O4'" "C1'"  sing N N 165 
SMT "C3'" "O3'"  sing N N 166 
SMT "C3'" "C2'"  sing N N 167 
SMT "C3'" "H3'"  sing N N 168 
SMT "O3'" HO3    sing N N 169 
SMT "C2'" "O2'"  sing N N 170 
SMT "C2'" "C1'"  sing N N 171 
SMT "C2'" "H2'"  sing N N 172 
SMT "O2'" "CA'"  sing N N 173 
SMT "C1'" N1     sing N N 174 
SMT "C1'" "H1'"  sing N N 175 
SMT N1    C2     sing N N 176 
SMT N1    C6     sing N N 177 
SMT C2    O2     doub N N 178 
SMT C2    N3     sing N N 179 
SMT N3    C4     sing N N 180 
SMT N3    H3     sing N N 181 
SMT C4    O4     doub N N 182 
SMT C4    C5     sing N N 183 
SMT C5    C5A    sing N N 184 
SMT C5    C6     doub N N 185 
SMT C5A   H5A    sing N N 186 
SMT C5A   H5A1   sing N N 187 
SMT C5A   H5A2   sing N N 188 
SMT C6    H6     sing N N 189 
SMT "CA'" CB     sing N N 190 
SMT "CA'" HA1    sing N N 191 
SMT "CA'" HA2    sing N N 192 
SMT CB    SC     sing N N 193 
SMT CB    HB1    sing N N 194 
SMT CB    HB2    sing N N 195 
SMT SC    CD     sing N N 196 
SMT CD    HD1    sing N N 197 
SMT CD    HD2    sing N N 198 
SMT CD    HD3    sing N N 199 
# 
_ndb_struct_conf_na.entry_id   1MLX 
_ndb_struct_conf_na.feature    'a-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DG  1  1_555 B DC  10 1_555 -0.280 -0.127 0.135  2.940  -5.135  -1.535 1  A_DG1:DC120_B  A 1  ? B 120 ? 19 1 
1 A DC  2  1_555 B DG  9  1_555 0.077  -0.055 0.058  5.391  -14.345 0.313  2  A_DC2:DG119_B  A 2  ? B 119 ? 19 1 
1 A DG  3  1_555 B DC  8  1_555 -0.303 -0.128 0.120  -6.712 -14.861 0.067  3  A_DG3:DC118_B  A 3  ? B 118 ? 19 1 
1 A DT  4  1_555 B DA  7  1_555 -0.088 -0.085 0.066  -6.092 -16.398 -0.356 4  A_DT4:DA117_B  A 4  ? B 117 ? 20 1 
1 A DA  5  1_555 B SMT 6  1_555 0.150  -0.087 0.135  -2.801 -14.848 -4.462 5  A_DA5:SMT116_B A 5  ? B 116 ? 20 1 
1 A SMT 6  1_555 B DA  5  1_555 0.023  -0.043 0.237  4.419  -16.386 7.887  6  A_SMT6:DA115_B A 6  ? B 115 ? 20 1 
1 A DA  7  1_555 B DT  4  1_555 0.026  -0.122 0.048  4.220  -12.277 3.884  7  A_DA7:DT114_B  A 7  ? B 114 ? 20 1 
1 A DC  8  1_555 B DG  3  1_555 0.216  -0.176 -0.088 8.864  -12.987 -0.967 8  A_DC8:DG113_B  A 8  ? B 113 ? 19 1 
1 A DG  9  1_555 B DC  2  1_555 -0.148 -0.133 -0.135 -7.901 -8.635  1.479  9  A_DG9:DC112_B  A 9  ? B 112 ? 19 1 
1 A DC  10 1_555 B DG  1  1_555 0.178  -0.114 0.130  -3.607 5.922   0.060  10 A_DC10:DG111_B A 10 ? B 111 ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DG  1 1_555 B DC  10 1_555 A DC  2  1_555 B DG  9 1_555 0.332  -1.474 3.261 2.030  -0.291 38.539 -2.195 -0.251 3.285 -0.440 
-3.072 38.592 1 AA_DG1DC2:DG119DC120_BB   A 1 ? B 120 ? A 2  ? B 119 ? 
1 A DC  2 1_555 B DG  9  1_555 A DG  3  1_555 B DC  8 1_555 0.238  -2.156 3.416 -0.203 10.654 25.877 -6.788 -0.537 2.358 22.608 
0.431  27.950 2 AA_DC2DG3:DC118DG119_BB   A 2 ? B 119 ? A 3  ? B 118 ? 
1 A DG  3 1_555 B DC  8  1_555 A DT  4  1_555 B DA  7 1_555 -1.117 -1.510 3.196 -1.928 4.816  36.957 -2.969 1.502  3.034 7.551  
3.023  37.306 3 AA_DG3DT4:DA117DC118_BB   A 3 ? B 118 ? A 4  ? B 117 ? 
1 A DT  4 1_555 B DA  7  1_555 A DA  5  1_555 B SMT 6 1_555 0.613  -1.563 3.107 2.069  18.699 25.527 -5.672 -0.814 1.650 36.641 
-4.054 31.618 4 AA_DT4DA5:SMT116DA117_BB  A 4 ? B 117 ? A 5  ? B 116 ? 
1 A DA  5 1_555 B SMT 6  1_555 A SMT 6  1_555 B DA  5 1_555 1.054  -1.353 3.060 1.286  5.524  32.811 -3.199 -1.645 2.839 9.689  
-2.256 33.285 5 AA_DA5SMT6:DA115SMT116_BB A 5 ? B 116 ? A 6  ? B 115 ? 
1 A SMT 6 1_555 B DA  5  1_555 A DA  7  1_555 B DT  4 1_555 -0.339 -1.390 3.072 0.397  14.938 30.468 -4.425 0.637  2.169 26.516 
-0.704 33.857 6 AA_SMT6DA7:DT114DA115_BB  A 6 ? B 115 ? A 7  ? B 114 ? 
1 A DA  7 1_555 B DT  4  1_555 A DC  8  1_555 B DG  3 1_555 -0.004 -1.878 3.251 0.288  3.329  29.596 -4.324 0.066  3.026 6.491  
-0.561 29.780 7 AA_DA7DC8:DG113DT114_BB   A 7 ? B 114 ? A 8  ? B 113 ? 
1 A DC  8 1_555 B DG  3  1_555 A DG  9  1_555 B DC  2 1_555 -0.303 -1.962 3.593 0.324  12.330 29.726 -5.719 0.605  2.591 22.835 
-0.599 32.130 8 AA_DC8DG9:DC112DG113_BB   A 8 ? B 113 ? A 9  ? B 112 ? 
1 A DG  9 1_555 B DC  2  1_555 A DC  10 1_555 B DG  1 1_555 0.151  -1.685 3.308 -0.450 1.221  34.421 -3.036 -0.326 3.246 2.062  
0.759  34.445 9 AA_DG9DC10:DG111DC112_BB  A 9 ? B 112 ? A 10 ? B 111 ? 
# 
_atom_sites.entry_id                    1MLX 
_atom_sites.fract_transf_matrix[1][1]   0.040440 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.022486 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.021631 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C 
H 
N 
O 
P 
S 
# 
loop_