HEADER TRANSFERASE 02-SEP-02 1MLY TITLE CRYSTAL STRUCTURE OF 7,8-DIAMINOPELARGONIC ACID SYNTHASE IN COMPLEX TITLE 2 WITH THE CIS ISOMER OF AMICLENOMYCIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7,8-DIAMINO-PELARGONIC ACID AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE, COMPND 5 DAPA AMINOTRANSFERASE; COMPND 6 EC: 2.6.1.62; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BIOA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET24 KEYWDS AMINOTRANSFERASE, FOLD TYPE I, SUBCLASS II, AMICLENOMYCIN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.SANDMARK,S.MANN,A.MARQUET,G.SCHNEIDER REVDAT 5 14-FEB-24 1MLY 1 REMARK LINK REVDAT 4 07-MAR-18 1MLY 1 REMARK REVDAT 3 13-JUL-11 1MLY 1 VERSN REVDAT 2 24-FEB-09 1MLY 1 VERSN REVDAT 1 04-DEC-02 1MLY 0 JRNL AUTH J.SANDMARK,S.MANN,A.MARQUET,G.SCHNEIDER JRNL TITL STRUCTURAL BASIS FOR THE INHIBITION OF THE BIOSYNTHESIS OF JRNL TITL 2 BIOTIN BY THE ANTIBIOTIC AMICLENOMYCIN JRNL REF J.BIOL.CHEM. V. 277 43352 2002 JRNL REFN ISSN 0021-9258 JRNL PMID 12218056 JRNL DOI 10.1074/JBC.M207239200 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 66847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3492 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4363 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2530 REMARK 3 BIN FREE R VALUE SET COUNT : 208 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6588 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 537 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.08000 REMARK 3 B22 (A**2) : 1.57000 REMARK 3 B33 (A**2) : -1.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.24000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.533 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6743 ; 0.010 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 6155 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9159 ; 1.376 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14223 ; 1.177 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 850 ; 3.860 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1144 ;17.172 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1014 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7537 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1377 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1603 ; 0.266 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6013 ; 0.214 ; 0.300 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3 ; 0.129 ; 0.500 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 540 ; 0.186 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): 3 ; 0.255 ; 0.500 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 17 ; 0.257 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): 41 ; 0.241 ; 0.300 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.301 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4258 ; 0.542 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6809 ; 0.999 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2485 ; 1.403 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2350 ; 2.290 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 IN MONOMER A TWO STRETCHES OF RESIDUES ARE DISORDERED, 159-168 REMARK 3 AND 180-189 RESP. REMARK 3 IN MONOMER B THREE STRETCHES OF RESIDUES ARE DISORDERED, 159-168, REMARK 3 180-189 AND 299-303 REMARK 3 RESP. RESIDUE 429 WAS EXCLUDED FROM BOTH MONOMERS. A NUMBER OF REMARK 3 SIDE CHAINS ON THE SURFACE REMARK 3 OF THE PROTEIN ARE DISORDERED. THE OCCUPANCY FOR THESE IS REMARK 3 ESTIMATED TO 0 IN MOST CASES. REMARK 3 IN FOUR CASES THE SIDE CHAINS ARE GIVEN THE OCCUPANCY 0.5. REMARK 4 REMARK 4 1MLY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-02. REMARK 100 THE DEPOSITION ID IS D_1000017005. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I711 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.968 REMARK 200 MONOCHROMATOR : SI(111) MONOCROMATOR CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70391 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 40.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06200 REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.25900 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG4000, MPD, HEPES, PH 7.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 64.32750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.03650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 64.32750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.03650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 183 REMARK 465 GLN A 429 REMARK 465 GLN B 429 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU B 185 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLN A 101 CB CG CD OE1 NE2 REMARK 480 SER A 163 CB OG REMARK 480 LYS A 166 CD CE NZ REMARK 480 GLU A 171 CG CD OE1 OE2 REMARK 480 GLU A 185 CG CD OE1 OE2 REMARK 480 ARG A 189 NE CZ NH1 NH2 REMARK 480 ASP A 190 CG OD1 OD2 REMARK 480 ARG A 196 CA CB NE CZ NH1 NH2 REMARK 480 ARG A 202 NE CZ NH1 NH2 REMARK 480 GLU A 264 CD OE1 OE2 REMARK 480 GLU A 300 CG CD OE1 OE2 REMARK 480 VAL A 341 CG1 REMARK 480 ARG A 344 CG NE REMARK 480 GLU A 354 CG CD OE1 OE2 REMARK 480 LYS A 381 CE NZ REMARK 480 GLU A 385 CD OE1 OE2 REMARK 480 ARG A 419 CD NE CZ NH1 NH2 REMARK 480 ASP A 423 CG OD1 OD2 REMARK 480 GLU B 90 CD OE1 OE2 REMARK 480 GLN B 135 CG CD OE1 NE2 REMARK 480 LYS B 166 CB CG CD CE NZ REMARK 480 GLU B 171 CG CD OE1 OE2 REMARK 480 GLN B 179 CG CD OE1 NE2 REMARK 480 GLU B 188 CB CG REMARK 480 ARG B 189 CZ NH1 NH2 REMARK 480 ARG B 196 CZ NH1 NH2 REMARK 480 ARG B 202 CB CG CD NE CZ NH1 NH2 REMARK 480 GLU B 300 CB CG CD OE1 OE2 REMARK 480 GLN B 334 CB CG CD OE1 NE2 REMARK 480 GLU B 345 CG CD OE1 OE2 REMARK 480 GLU B 424 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 423 CB THR A 425 1.70 REMARK 500 OD1 ASP A 423 OG1 THR A 425 1.77 REMARK 500 NH2 ARG A 237 O HOH A 883 1.85 REMARK 500 O GLU A 340 CG ARG A 344 2.07 REMARK 500 O3P PLP A 730 O HOH A 797 2.07 REMARK 500 O HOH A 764 O HOH A 797 2.07 REMARK 500 O HOH A 776 O HOH B 990 2.08 REMARK 500 O HOH A 764 O HOH A 891 2.08 REMARK 500 O CYS A 428 O HOH A 851 2.09 REMARK 500 OE2 GLU B 226 NH1 ARG B 230 2.11 REMARK 500 O HOH A 751 O HOH A 917 2.11 REMARK 500 OH TYR A 17 OD1 ASP A 147 2.13 REMARK 500 O HOH B 926 O HOH B 965 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O THR B 21 O THR B 21 2556 1.39 REMARK 500 NH1 ARG A 189 O HOH A 809 4445 1.77 REMARK 500 O HOH B 943 O HOH B 1099 2556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 189 CD ARG A 189 NE 0.104 REMARK 500 ARG A 196 CD ARG A 196 NE -0.182 REMARK 500 ARG A 202 CD ARG A 202 NE -0.140 REMARK 500 GLU A 300 CB GLU A 300 CG -0.185 REMARK 500 LYS A 381 CD LYS A 381 CE 0.286 REMARK 500 ASP A 423 CB ASP A 423 CG -0.208 REMARK 500 GLU B 171 CB GLU B 171 CG 0.349 REMARK 500 ARG B 196 NE ARG B 196 CZ -0.104 REMARK 500 GLU B 424 CB GLU B 424 CG -0.186 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 156 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 158 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ARG A 196 CA - CB - CG ANGL. DEV. = 14.0 DEGREES REMARK 500 ARG A 196 CB - CG - CD ANGL. DEV. = 22.8 DEGREES REMARK 500 ARG A 196 CG - CD - NE ANGL. DEV. = -19.0 DEGREES REMARK 500 ASP A 423 CA - CB - CG ANGL. DEV. = 36.5 DEGREES REMARK 500 ASP A 423 CB - CG - OD1 ANGL. DEV. = 9.5 DEGREES REMARK 500 ASP A 423 CB - CG - OD2 ANGL. DEV. = -8.4 DEGREES REMARK 500 PHE B 140 CB - CA - C ANGL. DEV. = 15.2 DEGREES REMARK 500 PHE B 140 CB - CG - CD2 ANGL. DEV. = -10.3 DEGREES REMARK 500 PHE B 140 CB - CG - CD1 ANGL. DEV. = 12.1 DEGREES REMARK 500 ASP B 158 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 GLU B 171 CA - CB - CG ANGL. DEV. = -15.3 DEGREES REMARK 500 ARG B 196 CD - NE - CZ ANGL. DEV. = 10.5 DEGREES REMARK 500 ARG B 230 CG - CD - NE ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG B 230 NE - CZ - NH1 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 230 NE - CZ - NH2 ANGL. DEV. = 4.3 DEGREES REMARK 500 ASP B 358 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 423 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 17 53.91 36.92 REMARK 500 PRO A 23 131.10 -35.40 REMARK 500 PRO A 25 142.01 -38.09 REMARK 500 TRP A 53 -1.88 82.38 REMARK 500 MET A 75 124.28 -177.18 REMARK 500 ILE A 213 -45.45 72.71 REMARK 500 LYS A 274 -101.27 45.20 REMARK 500 ASN A 313 113.15 -35.89 REMARK 500 ALA A 364 42.72 -95.82 REMARK 500 GLU A 424 -28.71 -31.39 REMARK 500 THR A 425 -59.34 -28.75 REMARK 500 TRP B 52 63.63 67.87 REMARK 500 TRP B 53 -31.36 83.87 REMARK 500 MET B 75 124.54 -174.49 REMARK 500 ILE B 213 -50.73 67.40 REMARK 500 PHE B 251 39.50 71.58 REMARK 500 LYS B 274 -100.03 42.52 REMARK 500 ASN B 313 111.32 -31.32 REMARK 500 ALA B 364 43.88 -97.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 196 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 IN BOTH SUBUNITS THE COFACTOR PYRIDOXAL-5'-PHOSPHATE REMARK 600 FORMS A COVALENT ADDUCT WITH THE INHIBITOR AMICLENOMYCIN, REMARK 600 FOLLOWED BY AROMATIZATION OF AMICLENOMYCIN HEXADIENE RING. REMARK 600 THE BINDING MODE FOR THE INHIBITOR IS DIFFERENT IN THE TWO REMARK 600 SUBUNITS. THE ELECTRON DENSITY FOR THE COVALENT ADDUCT REMARK 600 BETWEEN AMICLENOMYCIN AND PYRIDOXAL-5'-PHOSPHATE IS BETTER REMARK 600 IN MONOMER A. FOR DETAILS SEE THE PRIMARY CITATION. REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 702 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 96 O REMARK 620 2 THR A 99 O 79.7 REMARK 620 3 THR A 99 OG1 82.8 72.3 REMARK 620 4 PRO A 100 O 144.6 67.0 97.7 REMARK 620 5 LEU A 103 O 121.0 153.1 92.2 94.3 REMARK 620 6 HOH A 774 O 90.7 116.1 168.3 93.3 82.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 701 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 96 O REMARK 620 2 THR B 99 OG1 86.8 REMARK 620 3 THR B 99 O 85.8 79.6 REMARK 620 4 PRO B 100 O 151.7 103.1 70.4 REMARK 620 5 LEU B 103 O 113.3 91.3 158.5 93.2 REMARK 620 6 HOH B 880 O 84.6 164.8 112.2 90.3 80.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACZ A 731 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACZ B 831 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 730 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 830 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QJ5 RELATED DB: PDB REMARK 900 WT STRUCTURE OF THE SAME ENZYME REMARK 900 RELATED ID: 1DTY RELATED DB: PDB REMARK 900 WT STRUCTURE OF THE SAME ENZYME REMARK 900 RELATED ID: 1QJ3 RELATED DB: PDB REMARK 900 STRUCTURE OF THE SUBSTRATE COMPLEX WITH THE WT ENZYME REMARK 900 RELATED ID: 1MGV RELATED DB: PDB REMARK 900 R391A MUTANT OF THE SAME ENZYME REMARK 900 RELATED ID: 1MLZ RELATED DB: PDB REMARK 900 1MLZ CONTAINS THE SAME ENZYME COMPLEXED WITH THE TRANS-ISOMER OF REMARK 900 AMICLENOMYCIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CRYSTALLIZED PROTEIN DIFFERS FROM THE SWISSPROT REMARK 999 SEQUENCE AT RESIDUE 14. IN THE SWISSPROT SEQUENCE NUMBER REMARK 999 14 IS A TRYPTOPHAN WHILE HERE IT IS A LEUCIN. THIS IS REMARK 999 CONFIRMED BY DNA SEQUENCING AND WAS ALSO REPORTED FOR REMARK 999 THE ORIGINAL WT STRUCTURE (1QJ5). DBREF 1MLY A 1 429 UNP P12995 BIOA_ECOLI 1 429 DBREF 1MLY B 1 429 UNP P12995 BIOA_ECOLI 1 429 SEQADV 1MLY LEU A 14 UNP P12995 TRP 14 SEE REMARK 999 SEQADV 1MLY LEU B 14 UNP P12995 TRP 14 SEE REMARK 999 SEQRES 1 A 429 MET THR THR ASP ASP LEU ALA PHE ASP GLN ARG HIS ILE SEQRES 2 A 429 LEU HIS PRO TYR THR SER MET THR SER PRO LEU PRO VAL SEQRES 3 A 429 TYR PRO VAL VAL SER ALA GLU GLY CYS GLU LEU ILE LEU SEQRES 4 A 429 SER ASP GLY ARG ARG LEU VAL ASP GLY MET SER SER TRP SEQRES 5 A 429 TRP ALA ALA ILE HIS GLY TYR ASN HIS PRO GLN LEU ASN SEQRES 6 A 429 ALA ALA MET LYS SER GLN ILE ASP ALA MET SER HIS VAL SEQRES 7 A 429 MET PHE GLY GLY ILE THR HIS ALA PRO ALA ILE GLU LEU SEQRES 8 A 429 CYS ARG LYS LEU VAL ALA MET THR PRO GLN PRO LEU GLU SEQRES 9 A 429 CYS VAL PHE LEU ALA ASP SER GLY SER VAL ALA VAL GLU SEQRES 10 A 429 VAL ALA MET LYS MET ALA LEU GLN TYR TRP GLN ALA LYS SEQRES 11 A 429 GLY GLU ALA ARG GLN ARG PHE LEU THR PHE ARG ASN GLY SEQRES 12 A 429 TYR HIS GLY ASP THR PHE GLY ALA MET SER VAL CYS ASP SEQRES 13 A 429 PRO ASP ASN SER MET HIS SER LEU TRP LYS GLY TYR LEU SEQRES 14 A 429 PRO GLU ASN LEU PHE ALA PRO ALA PRO GLN SER ARG MET SEQRES 15 A 429 ASP GLY GLU TRP ASP GLU ARG ASP MET VAL GLY PHE ALA SEQRES 16 A 429 ARG LEU MET ALA ALA HIS ARG HIS GLU ILE ALA ALA VAL SEQRES 17 A 429 ILE ILE GLU PRO ILE VAL GLN GLY ALA GLY GLY MET ARG SEQRES 18 A 429 MET TYR HIS PRO GLU TRP LEU LYS ARG ILE ARG LYS ILE SEQRES 19 A 429 CYS ASP ARG GLU GLY ILE LEU LEU ILE ALA ASP GLU ILE SEQRES 20 A 429 ALA THR GLY PHE GLY ARG THR GLY LYS LEU PHE ALA CYS SEQRES 21 A 429 GLU HIS ALA GLU ILE ALA PRO ASP ILE LEU CYS LEU GLY SEQRES 22 A 429 LYS ALA LEU THR GLY GLY THR MET THR LEU SER ALA THR SEQRES 23 A 429 LEU THR THR ARG GLU VAL ALA GLU THR ILE SER ASN GLY SEQRES 24 A 429 GLU ALA GLY CYS PHE MET HIS GLY PRO THR PHE MET GLY SEQRES 25 A 429 ASN PRO LEU ALA CYS ALA ALA ALA ASN ALA SER LEU ALA SEQRES 26 A 429 ILE LEU GLU SER GLY ASP TRP GLN GLN GLN VAL ALA ASP SEQRES 27 A 429 ILE GLU VAL GLN LEU ARG GLU GLN LEU ALA PRO ALA ARG SEQRES 28 A 429 ASP ALA GLU MET VAL ALA ASP VAL ARG VAL LEU GLY ALA SEQRES 29 A 429 ILE GLY VAL VAL GLU THR THR HIS PRO VAL ASN MET ALA SEQRES 30 A 429 ALA LEU GLN LYS PHE PHE VAL GLU GLN GLY VAL TRP ILE SEQRES 31 A 429 ARG PRO PHE GLY LYS LEU ILE TYR LEU MET PRO PRO TYR SEQRES 32 A 429 ILE ILE LEU PRO GLN GLN LEU GLN ARG LEU THR ALA ALA SEQRES 33 A 429 VAL ASN ARG ALA VAL GLN ASP GLU THR PHE PHE CYS GLN SEQRES 1 B 429 MET THR THR ASP ASP LEU ALA PHE ASP GLN ARG HIS ILE SEQRES 2 B 429 LEU HIS PRO TYR THR SER MET THR SER PRO LEU PRO VAL SEQRES 3 B 429 TYR PRO VAL VAL SER ALA GLU GLY CYS GLU LEU ILE LEU SEQRES 4 B 429 SER ASP GLY ARG ARG LEU VAL ASP GLY MET SER SER TRP SEQRES 5 B 429 TRP ALA ALA ILE HIS GLY TYR ASN HIS PRO GLN LEU ASN SEQRES 6 B 429 ALA ALA MET LYS SER GLN ILE ASP ALA MET SER HIS VAL SEQRES 7 B 429 MET PHE GLY GLY ILE THR HIS ALA PRO ALA ILE GLU LEU SEQRES 8 B 429 CYS ARG LYS LEU VAL ALA MET THR PRO GLN PRO LEU GLU SEQRES 9 B 429 CYS VAL PHE LEU ALA ASP SER GLY SER VAL ALA VAL GLU SEQRES 10 B 429 VAL ALA MET LYS MET ALA LEU GLN TYR TRP GLN ALA LYS SEQRES 11 B 429 GLY GLU ALA ARG GLN ARG PHE LEU THR PHE ARG ASN GLY SEQRES 12 B 429 TYR HIS GLY ASP THR PHE GLY ALA MET SER VAL CYS ASP SEQRES 13 B 429 PRO ASP ASN SER MET HIS SER LEU TRP LYS GLY TYR LEU SEQRES 14 B 429 PRO GLU ASN LEU PHE ALA PRO ALA PRO GLN SER ARG MET SEQRES 15 B 429 ASP GLY GLU TRP ASP GLU ARG ASP MET VAL GLY PHE ALA SEQRES 16 B 429 ARG LEU MET ALA ALA HIS ARG HIS GLU ILE ALA ALA VAL SEQRES 17 B 429 ILE ILE GLU PRO ILE VAL GLN GLY ALA GLY GLY MET ARG SEQRES 18 B 429 MET TYR HIS PRO GLU TRP LEU LYS ARG ILE ARG LYS ILE SEQRES 19 B 429 CYS ASP ARG GLU GLY ILE LEU LEU ILE ALA ASP GLU ILE SEQRES 20 B 429 ALA THR GLY PHE GLY ARG THR GLY LYS LEU PHE ALA CYS SEQRES 21 B 429 GLU HIS ALA GLU ILE ALA PRO ASP ILE LEU CYS LEU GLY SEQRES 22 B 429 LYS ALA LEU THR GLY GLY THR MET THR LEU SER ALA THR SEQRES 23 B 429 LEU THR THR ARG GLU VAL ALA GLU THR ILE SER ASN GLY SEQRES 24 B 429 GLU ALA GLY CYS PHE MET HIS GLY PRO THR PHE MET GLY SEQRES 25 B 429 ASN PRO LEU ALA CYS ALA ALA ALA ASN ALA SER LEU ALA SEQRES 26 B 429 ILE LEU GLU SER GLY ASP TRP GLN GLN GLN VAL ALA ASP SEQRES 27 B 429 ILE GLU VAL GLN LEU ARG GLU GLN LEU ALA PRO ALA ARG SEQRES 28 B 429 ASP ALA GLU MET VAL ALA ASP VAL ARG VAL LEU GLY ALA SEQRES 29 B 429 ILE GLY VAL VAL GLU THR THR HIS PRO VAL ASN MET ALA SEQRES 30 B 429 ALA LEU GLN LYS PHE PHE VAL GLU GLN GLY VAL TRP ILE SEQRES 31 B 429 ARG PRO PHE GLY LYS LEU ILE TYR LEU MET PRO PRO TYR SEQRES 32 B 429 ILE ILE LEU PRO GLN GLN LEU GLN ARG LEU THR ALA ALA SEQRES 33 B 429 VAL ASN ARG ALA VAL GLN ASP GLU THR PHE PHE CYS GLN HET ACZ A 731 14 HET NA A 702 1 HET PLP A 730 15 HET ACZ B 831 14 HET NA B 701 1 HET PLP B 830 15 HETNAM ACZ CIS-AMICLENOMYCIN HETNAM NA SODIUM ION HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN ACZ 2-AMINO-4-(4-AMINO-CYCLOHEXA-2,5-DIENYL)-BUTYRIC ACID HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 ACZ 2(C10 H16 N2 O2) FORMUL 4 NA 2(NA 1+) FORMUL 5 PLP 2(C8 H10 N O6 P) FORMUL 9 HOH *537(H2 O) HELIX 1 1 THR A 2 ILE A 13 1 12 HELIX 2 2 MET A 49 ALA A 54 1 6 HELIX 3 3 HIS A 61 MET A 75 1 15 HELIX 4 4 HIS A 85 THR A 99 1 15 HELIX 5 5 SER A 111 LYS A 130 1 20 HELIX 6 6 THR A 148 SER A 153 1 6 HELIX 7 7 MET A 161 LYS A 166 5 6 HELIX 8 8 ASP A 187 ASP A 190 5 4 HELIX 9 9 MET A 191 ARG A 202 1 12 HELIX 10 10 PRO A 225 GLY A 239 1 15 HELIX 11 11 PHE A 258 GLU A 264 5 7 HELIX 12 12 GLY A 273 GLY A 278 5 6 HELIX 13 13 THR A 289 ASN A 298 1 10 HELIX 14 14 ASN A 313 SER A 329 1 17 HELIX 15 15 ASP A 331 ALA A 348 1 18 HELIX 16 16 PRO A 349 ALA A 353 5 5 HELIX 17 17 ASN A 375 GLN A 386 1 12 HELIX 18 18 LEU A 406 VAL A 421 1 16 HELIX 19 19 GLN A 422 PHE A 427 5 6 HELIX 20 20 THR B 2 ILE B 13 1 12 HELIX 21 21 HIS B 61 MET B 75 1 15 HELIX 22 22 HIS B 85 THR B 99 1 15 HELIX 23 23 SER B 111 ALA B 129 1 19 HELIX 24 24 THR B 148 SER B 153 1 6 HELIX 25 25 MET B 161 LYS B 166 5 6 HELIX 26 26 ASP B 187 ASP B 190 5 4 HELIX 27 27 MET B 191 ARG B 202 1 12 HELIX 28 28 PRO B 225 GLY B 239 1 15 HELIX 29 29 PHE B 258 ALA B 263 5 6 HELIX 30 30 GLY B 273 GLY B 278 5 6 HELIX 31 31 ARG B 290 ASN B 298 1 9 HELIX 32 32 ASN B 313 SER B 329 1 17 HELIX 33 33 ASP B 331 ALA B 348 1 18 HELIX 34 34 PRO B 349 ALA B 353 5 5 HELIX 35 35 ASN B 375 GLN B 386 1 12 HELIX 36 36 LEU B 406 VAL B 421 1 16 SHEET 1 A 5 VAL A 388 TRP A 389 0 SHEET 2 A 5 ARG A 44 ASP A 47 1 N VAL A 46 O TRP A 389 SHEET 3 A 5 GLU A 36 LEU A 39 -1 N LEU A 37 O LEU A 45 SHEET 4 A 5 TYR A 27 GLU A 33 -1 N SER A 31 O ILE A 38 SHEET 5 A 5 ILE B 83 THR B 84 1 O THR B 84 N TYR A 27 SHEET 1 B 5 ILE A 83 THR A 84 0 SHEET 2 B 5 TYR B 27 GLU B 33 1 O VAL B 29 N THR A 84 SHEET 3 B 5 GLU B 36 LEU B 39 -1 O ILE B 38 N SER B 31 SHEET 4 B 5 ARG B 44 ASP B 47 -1 O LEU B 45 N LEU B 37 SHEET 5 B 5 VAL B 388 TRP B 389 1 O TRP B 389 N VAL B 46 SHEET 1 C 7 CYS A 105 ALA A 109 0 SHEET 2 C 7 SER A 284 THR A 288 -1 O SER A 284 N ALA A 109 SHEET 3 C 7 ILE A 269 LEU A 272 -1 N LEU A 272 O ALA A 285 SHEET 4 C 7 LEU A 241 ASP A 245 1 N ALA A 244 O ILE A 269 SHEET 5 C 7 ILE A 205 ILE A 210 1 N VAL A 208 O ILE A 243 SHEET 6 C 7 ARG A 136 PHE A 140 1 N ARG A 136 O ALA A 206 SHEET 7 C 7 LEU A 173 ALA A 175 1 O ALA A 175 N THR A 139 SHEET 1 D 2 VAL A 214 GLN A 215 0 SHEET 2 D 2 ARG A 221 MET A 222 -1 O ARG A 221 N GLN A 215 SHEET 1 E 3 VAL A 356 LEU A 362 0 SHEET 2 E 3 ILE A 365 THR A 370 -1 O VAL A 367 N ARG A 360 SHEET 3 E 3 LEU A 396 LEU A 399 -1 O LEU A 399 N GLY A 366 SHEET 1 F 7 LEU B 103 ALA B 109 0 SHEET 2 F 7 SER B 284 THR B 289 -1 O SER B 284 N ALA B 109 SHEET 3 F 7 ILE B 269 LEU B 272 -1 N LEU B 272 O ALA B 285 SHEET 4 F 7 LEU B 241 ASP B 245 1 N ALA B 244 O ILE B 269 SHEET 5 F 7 ILE B 205 ILE B 210 1 N VAL B 208 O ILE B 243 SHEET 6 F 7 ARG B 136 PHE B 140 1 N ARG B 136 O ALA B 206 SHEET 7 F 7 LEU B 173 ALA B 175 1 O ALA B 175 N THR B 139 SHEET 1 G 2 VAL B 214 GLN B 215 0 SHEET 2 G 2 ARG B 221 MET B 222 -1 O ARG B 221 N GLN B 215 SHEET 1 H 3 VAL B 356 LEU B 362 0 SHEET 2 H 3 ILE B 365 THR B 370 -1 O VAL B 367 N ARG B 360 SHEET 3 H 3 LEU B 396 LEU B 399 -1 O LEU B 399 N GLY B 366 LINK C4A PLP A 730 NH ACZ A 731 1555 1555 1.46 LINK C4A PLP B 830 NH ACZ B 831 1555 1555 1.45 LINK O VAL A 96 NA NA A 702 1555 1555 2.23 LINK O THR A 99 NA NA A 702 1555 1555 2.89 LINK OG1 THR A 99 NA NA A 702 1555 1555 2.60 LINK O PRO A 100 NA NA A 702 1555 1555 2.59 LINK O LEU A 103 NA NA A 702 1555 1555 2.29 LINK NA NA A 702 O HOH A 774 1555 1555 2.40 LINK O VAL B 96 NA NA B 701 1555 1555 2.29 LINK OG1 THR B 99 NA NA B 701 1555 1555 2.56 LINK O THR B 99 NA NA B 701 1555 1555 2.66 LINK O PRO B 100 NA NA B 701 1555 1555 2.60 LINK O LEU B 103 NA NA B 701 1555 1555 2.43 LINK NA NA B 701 O HOH B 880 1555 1555 2.52 SITE 1 AC1 11 TRP A 52 TRP A 53 TYR A 144 LYS A 274 SITE 2 AC1 11 ARG A 391 PHE A 393 PLP A 730 HOH A 749 SITE 3 AC1 11 HOH A 767 HOH A 806 HOH B 976 SITE 1 AC2 13 THR A 309 TRP B 52 TYR B 144 ALA B 217 SITE 2 AC2 13 ARG B 391 PHE B 393 TYR B 398 PLP B 830 SITE 3 AC2 13 HOH B 900 HOH B 914 HOH B 919 HOH B 973 SITE 4 AC2 13 HOH B 992 SITE 1 AC3 5 VAL B 96 THR B 99 PRO B 100 LEU B 103 SITE 2 AC3 5 HOH B 880 SITE 1 AC4 5 VAL A 96 THR A 99 PRO A 100 LEU A 103 SITE 2 AC4 5 HOH A 774 SITE 1 AC5 17 GLY A 112 SER A 113 TYR A 144 HIS A 145 SITE 2 AC5 17 GLY A 146 GLU A 211 ASP A 245 ILE A 247 SITE 3 AC5 17 LYS A 274 ACZ A 731 HOH A 744 HOH A 794 SITE 4 AC5 17 HOH A 797 PRO B 308 THR B 309 HOH B 832 SITE 5 AC5 17 HOH B 847 SITE 1 AC6 16 PRO A 308 THR A 309 HOH A 735 TRP B 53 SITE 2 AC6 16 GLY B 112 SER B 113 HIS B 145 GLU B 211 SITE 3 AC6 16 ASP B 245 ILE B 247 ALA B 248 LYS B 274 SITE 4 AC6 16 ACZ B 831 HOH B 836 HOH B 862 HOH B 875 CRYST1 128.655 56.073 116.174 90.00 109.86 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007773 0.000000 0.002807 0.00000 SCALE2 0.000000 0.017834 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009152 0.00000