HEADER MEMBRANE PROTEIN 03-SEP-02 1MM7 TITLE CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE (S1S2J) IN COMPLEX TITLE 2 WITH QUISQUALATE IN A ZINC CRYSTAL FORM AT 1.65 ANGSTROMS RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTAMATE RECEPTOR 2; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: LIGAND BINDING CORE (S1S2J); COMPND 5 SYNONYM: GLUR-2, GLUR-B, GLUR-K2, GLUTAMATE RECEPTOR IONOTROPIC, AMPA COMPND 6 2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: GLUR-2 OR GLUR-B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PETGQ KEYWDS IONOTROPIC GLUTAMATE RECEPTOR, GLUR2, LIGAND BINDING CORE, S1S2, FULL KEYWDS 2 AGONIST, QUISQUALATE, COMPLEX, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.JIN,M.HORNING,M.L.MAYER,E.GOUAUX REVDAT 3 02-AUG-17 1MM7 1 SOURCE REMARK REVDAT 2 24-FEB-09 1MM7 1 VERSN REVDAT 1 04-FEB-03 1MM7 0 JRNL AUTH R.JIN,M.HORNING,M.L.MAYER,E.GOUAUX JRNL TITL MECHANISM OF ACTIVATION AND SELECTIVITY IN A LIGAND-GATED JRNL TITL 2 ION CHANNEL: STRUCTURAL AND FUNCTIONAL STUDIES OF GLUR2 AND JRNL TITL 3 QUISQUALATE JRNL REF BIOCHEMISTRY V. 41 15635 2003 JRNL REFN ISSN 0006-2960 JRNL PMID 12501192 JRNL DOI 10.1021/BI020583K REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.ARMSTRONG,E.GOUAUX REMARK 1 TITL MECHANISMS FOR ACTIVATION AND ANTAGONISM OF AN REMARK 1 TITL 2 AMPA-SENSITIVE GLUTAMATE RECEPTOR: CRYSTAL STRUCTURES OF THE REMARK 1 TITL 3 GLUR2 LIGAND BINDING CORE REMARK 1 REF NEURON V. 28 165 2000 REMARK 1 REFN ISSN 0896-6273 REMARK 1 DOI 10.1016/S0896-6273(00)00094-5 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2335387.770 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 96906 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4890 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 59.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9971 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE : 0.2870 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.10 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 534 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.012 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5851 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 774 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.43000 REMARK 3 B22 (A**2) : 0.61000 REMARK 3 B33 (A**2) : -2.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.20 REMARK 3 ESD FROM SIGMAA (A) : 0.17 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.23 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.15 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.340 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 58.32 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : PARA_Q.TEST REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : TOPO_Q.TEST REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MM7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-02. REMARK 100 THE DEPOSITION ID IS D_1000017013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAR-00 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9879 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96906 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 200 DATA REDUNDANCY : 5.640 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.19700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1FTM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8K, ZINC ACETATE, SODIUM ACETATE, REMARK 280 PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 56.95600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 81.72650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 56.95600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 81.72650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 113.91200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 163.45300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 GLY A 262 REMARK 465 SER A 263 REMARK 465 GLY B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 262 REMARK 465 SER B 263 REMARK 465 GLY C 1 REMARK 465 ALA C 2 REMARK 465 ASN C 3 REMARK 465 GLY C 262 REMARK 465 SER C 263 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CB CG CD CE NZ REMARK 470 LYS A 21 CB CG CD CE NZ REMARK 470 ASN A 22 CG OD1 ND2 REMARK 470 GLU A 24 CG CD OE1 OE2 REMARK 470 LYS A 50 CD CE NZ REMARK 470 LYS A 52 CD CE NZ REMARK 470 ASP A 67 CB CG OD1 OD2 REMARK 470 LYS A 69 CD CE NZ REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 THR A 131 CB OG1 CG2 REMARK 470 GLU A 132 CG CD OE1 OE2 REMARK 470 ARG A 149 NE CZ NH1 NH2 REMARK 470 LYS A 151 CD CE NZ REMARK 470 ILE A 152 CD1 REMARK 470 ALA A 153 CB REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 185 CD CE NZ REMARK 470 LYS A 258 CB CG CD CE NZ REMARK 470 ASN B 3 CG OD1 ND2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 GLU B 27 CG CD OE1 OE2 REMARK 470 LYS B 50 CD CE NZ REMARK 470 ASP B 67 CB CG OD1 OD2 REMARK 470 LYS B 82 CD CE NZ REMARK 470 GLU B 122 CB CG CD OE1 OE2 REMARK 470 LYS B 129 CD CE NZ REMARK 470 LYS B 151 CB CG CD CE NZ REMARK 470 ARG B 163 CD NE CZ NH1 NH2 REMARK 470 LYS B 183 CG CD CE NZ REMARK 470 LYS B 258 CB CG CD CE NZ REMARK 470 LYS C 4 CG CD CE NZ REMARK 470 LYS C 21 CB CG CD CE NZ REMARK 470 GLU C 24 CG CD OE1 OE2 REMARK 470 MET C 25 CB CG SD CE REMARK 470 GLU C 27 CG CD OE1 OE2 REMARK 470 GLU C 30 CD OE1 OE2 REMARK 470 LYS C 45 CG CD CE NZ REMARK 470 LYS C 52 CD CE NZ REMARK 470 GLU C 122 CB CG CD OE1 OE2 REMARK 470 THR C 131 CB OG1 CG2 REMARK 470 GLU C 132 CG CD OE1 OE2 REMARK 470 ARG C 149 CD NE CZ NH1 NH2 REMARK 470 LYS C 151 CB CG CD CE NZ REMARK 470 ALA C 153 CB REMARK 470 ASP C 156 CB CG OD1 OD2 REMARK 470 ARG C 163 CG CD NE CZ NH1 NH2 REMARK 470 ALA C 165 CB REMARK 470 GLU C 166 CB CG CD OE1 OE2 REMARK 470 ARG C 172 CD NE CZ NH1 NH2 REMARK 470 LYS C 183 CG CD CE NZ REMARK 470 LYS C 185 CD CE NZ REMARK 470 TYR C 256 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR C 256 OH REMARK 470 LYS C 258 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 67 -73.75 142.48 REMARK 500 TRP B 255 -64.21 -102.11 REMARK 500 ALA C 153 -63.49 -17.08 REMARK 500 PRO C 205 21.19 -74.94 REMARK 500 TRP C 255 -63.15 -107.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 901 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 42 OE1 REMARK 620 2 HIS A 46 NE2 97.0 REMARK 620 3 GLU B 166 OE1 142.9 84.6 REMARK 620 4 GLU B 166 OE2 100.0 125.1 52.3 REMARK 620 5 HOH A 923 O 113.0 98.7 103.4 120.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 902 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 23 NE2 REMARK 620 2 HOH B1082 O 103.2 REMARK 620 3 GLU B 30 OE2 113.0 115.8 REMARK 620 4 HIS C 23 NE2 111.5 101.1 111.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 904 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 46 NE2 REMARK 620 2 HOH B1036 O 119.7 REMARK 620 3 GLU B 42 OE1 94.3 107.5 REMARK 620 4 GLU A 166 OE1 88.8 89.6 158.0 REMARK 620 5 GLU A 166 OE2 118.3 106.8 108.5 51.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 903 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1052 O REMARK 620 2 ASP C 65 OD2 95.4 REMARK 620 3 HOH A1002 O 154.2 104.8 REMARK 620 4 HIS A 23 NE2 97.4 104.4 93.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 905 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH C1030 O REMARK 620 2 GLU C 42 OE1 164.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 904 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 905 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUS A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUS B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE QUS C 803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FTJ RELATED DB: PDB REMARK 900 1FTJ IS THE SAME PROTEIN COMPLEXED WITH GLUTAMATE REMARK 900 RELATED ID: 1FTM RELATED DB: PDB REMARK 900 1FTM IS THE SAME PROTEIN COMPLEXED WITH AMPA REMARK 900 RELATED ID: 1MM6 RELATED DB: PDB REMARK 900 1MM6 IS THE CRYSTAL STRUCTURE OF THE GLUR2 LIGAND BINDING CORE REMARK 900 (S1S2J) IN COMPLEX WITH QUISQUALATE IN A NON ZINC CRYSTAL FORM REMARK 900 RELATED ID: 1MQG RELATED DB: PDB REMARK 900 1MQG IS THE SAME PROTEIN COMPLEXED WITH IODO-WILLARDIINE REMARK 900 RELATED ID: 1MQH RELATED DB: PDB REMARK 900 1MQH IS THE SAME PROTEIN COMPLEXED WITH BROMO-WILLARDIINE REMARK 900 RELATED ID: 1MQI RELATED DB: PDB REMARK 900 1MQI IS THE SAME PROTEIN COMPLEXED WITH FLUORO-WILLARDIINE REMARK 900 RELATED ID: 1MQJ RELATED DB: PDB REMARK 900 1MQJ IS THE SAME PROTEIN COMPLEXED WITH WILLARDIINE DBREF 1MM7 A 3 117 UNP P19491 GRIA2_RAT 413 527 DBREF 1MM7 A 120 263 UNP P19491 GLR2_RAT 653 796 DBREF 1MM7 B 3 117 UNP P19491 GRIA2_RAT 413 527 DBREF 1MM7 B 120 263 UNP P19491 GLR2_RAT 653 796 DBREF 1MM7 C 3 117 UNP P19491 GRIA2_RAT 413 527 DBREF 1MM7 C 120 263 UNP P19491 GLR2_RAT 653 796 SEQADV 1MM7 GLY A 1 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 ALA A 2 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 GLY A 118 UNP P19491 LINKER SEQADV 1MM7 THR A 119 UNP P19491 LINKER SEQADV 1MM7 GLY B 1 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 ALA B 2 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 GLY B 118 UNP P19491 LINKER SEQADV 1MM7 THR B 119 UNP P19491 LINKER SEQADV 1MM7 GLY C 1 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 ALA C 2 UNP P19491 CLONING ARTIFACT SEQADV 1MM7 GLY C 118 UNP P19491 LINKER SEQADV 1MM7 THR C 119 UNP P19491 LINKER SEQRES 1 A 263 GLY ALA ASN LYS THR VAL VAL VAL THR THR ILE LEU GLU SEQRES 2 A 263 SER PRO TYR VAL MET MET LYS LYS ASN HIS GLU MET LEU SEQRES 3 A 263 GLU GLY ASN GLU ARG TYR GLU GLY TYR CYS VAL ASP LEU SEQRES 4 A 263 ALA ALA GLU ILE ALA LYS HIS CYS GLY PHE LYS TYR LYS SEQRES 5 A 263 LEU THR ILE VAL GLY ASP GLY LYS TYR GLY ALA ARG ASP SEQRES 6 A 263 ALA ASP THR LYS ILE TRP ASN GLY MET VAL GLY GLU LEU SEQRES 7 A 263 VAL TYR GLY LYS ALA ASP ILE ALA ILE ALA PRO LEU THR SEQRES 8 A 263 ILE THR LEU VAL ARG GLU GLU VAL ILE ASP PHE SER LYS SEQRES 9 A 263 PRO PHE MET SER LEU GLY ILE SER ILE MET ILE LYS LYS SEQRES 10 A 263 GLY THR PRO ILE GLU SER ALA GLU ASP LEU SER LYS GLN SEQRES 11 A 263 THR GLU ILE ALA TYR GLY THR LEU ASP SER GLY SER THR SEQRES 12 A 263 LYS GLU PHE PHE ARG ARG SER LYS ILE ALA VAL PHE ASP SEQRES 13 A 263 LYS MET TRP THR TYR MET ARG SER ALA GLU PRO SER VAL SEQRES 14 A 263 PHE VAL ARG THR THR ALA GLU GLY VAL ALA ARG VAL ARG SEQRES 15 A 263 LYS SER LYS GLY LYS TYR ALA TYR LEU LEU GLU SER THR SEQRES 16 A 263 MET ASN GLU TYR ILE GLU GLN ARG LYS PRO CYS ASP THR SEQRES 17 A 263 MET LYS VAL GLY GLY ASN LEU ASP SER LYS GLY TYR GLY SEQRES 18 A 263 ILE ALA THR PRO LYS GLY SER SER LEU GLY ASN ALA VAL SEQRES 19 A 263 ASN LEU ALA VAL LEU LYS LEU ASN GLU GLN GLY LEU LEU SEQRES 20 A 263 ASP LYS LEU LYS ASN LYS TRP TRP TYR ASP LYS GLY GLU SEQRES 21 A 263 CYS GLY SER SEQRES 1 B 263 GLY ALA ASN LYS THR VAL VAL VAL THR THR ILE LEU GLU SEQRES 2 B 263 SER PRO TYR VAL MET MET LYS LYS ASN HIS GLU MET LEU SEQRES 3 B 263 GLU GLY ASN GLU ARG TYR GLU GLY TYR CYS VAL ASP LEU SEQRES 4 B 263 ALA ALA GLU ILE ALA LYS HIS CYS GLY PHE LYS TYR LYS SEQRES 5 B 263 LEU THR ILE VAL GLY ASP GLY LYS TYR GLY ALA ARG ASP SEQRES 6 B 263 ALA ASP THR LYS ILE TRP ASN GLY MET VAL GLY GLU LEU SEQRES 7 B 263 VAL TYR GLY LYS ALA ASP ILE ALA ILE ALA PRO LEU THR SEQRES 8 B 263 ILE THR LEU VAL ARG GLU GLU VAL ILE ASP PHE SER LYS SEQRES 9 B 263 PRO PHE MET SER LEU GLY ILE SER ILE MET ILE LYS LYS SEQRES 10 B 263 GLY THR PRO ILE GLU SER ALA GLU ASP LEU SER LYS GLN SEQRES 11 B 263 THR GLU ILE ALA TYR GLY THR LEU ASP SER GLY SER THR SEQRES 12 B 263 LYS GLU PHE PHE ARG ARG SER LYS ILE ALA VAL PHE ASP SEQRES 13 B 263 LYS MET TRP THR TYR MET ARG SER ALA GLU PRO SER VAL SEQRES 14 B 263 PHE VAL ARG THR THR ALA GLU GLY VAL ALA ARG VAL ARG SEQRES 15 B 263 LYS SER LYS GLY LYS TYR ALA TYR LEU LEU GLU SER THR SEQRES 16 B 263 MET ASN GLU TYR ILE GLU GLN ARG LYS PRO CYS ASP THR SEQRES 17 B 263 MET LYS VAL GLY GLY ASN LEU ASP SER LYS GLY TYR GLY SEQRES 18 B 263 ILE ALA THR PRO LYS GLY SER SER LEU GLY ASN ALA VAL SEQRES 19 B 263 ASN LEU ALA VAL LEU LYS LEU ASN GLU GLN GLY LEU LEU SEQRES 20 B 263 ASP LYS LEU LYS ASN LYS TRP TRP TYR ASP LYS GLY GLU SEQRES 21 B 263 CYS GLY SER SEQRES 1 C 263 GLY ALA ASN LYS THR VAL VAL VAL THR THR ILE LEU GLU SEQRES 2 C 263 SER PRO TYR VAL MET MET LYS LYS ASN HIS GLU MET LEU SEQRES 3 C 263 GLU GLY ASN GLU ARG TYR GLU GLY TYR CYS VAL ASP LEU SEQRES 4 C 263 ALA ALA GLU ILE ALA LYS HIS CYS GLY PHE LYS TYR LYS SEQRES 5 C 263 LEU THR ILE VAL GLY ASP GLY LYS TYR GLY ALA ARG ASP SEQRES 6 C 263 ALA ASP THR LYS ILE TRP ASN GLY MET VAL GLY GLU LEU SEQRES 7 C 263 VAL TYR GLY LYS ALA ASP ILE ALA ILE ALA PRO LEU THR SEQRES 8 C 263 ILE THR LEU VAL ARG GLU GLU VAL ILE ASP PHE SER LYS SEQRES 9 C 263 PRO PHE MET SER LEU GLY ILE SER ILE MET ILE LYS LYS SEQRES 10 C 263 GLY THR PRO ILE GLU SER ALA GLU ASP LEU SER LYS GLN SEQRES 11 C 263 THR GLU ILE ALA TYR GLY THR LEU ASP SER GLY SER THR SEQRES 12 C 263 LYS GLU PHE PHE ARG ARG SER LYS ILE ALA VAL PHE ASP SEQRES 13 C 263 LYS MET TRP THR TYR MET ARG SER ALA GLU PRO SER VAL SEQRES 14 C 263 PHE VAL ARG THR THR ALA GLU GLY VAL ALA ARG VAL ARG SEQRES 15 C 263 LYS SER LYS GLY LYS TYR ALA TYR LEU LEU GLU SER THR SEQRES 16 C 263 MET ASN GLU TYR ILE GLU GLN ARG LYS PRO CYS ASP THR SEQRES 17 C 263 MET LYS VAL GLY GLY ASN LEU ASP SER LYS GLY TYR GLY SEQRES 18 C 263 ILE ALA THR PRO LYS GLY SER SER LEU GLY ASN ALA VAL SEQRES 19 C 263 ASN LEU ALA VAL LEU LYS LEU ASN GLU GLN GLY LEU LEU SEQRES 20 C 263 ASP LYS LEU LYS ASN LYS TRP TRP TYR ASP LYS GLY GLU SEQRES 21 C 263 CYS GLY SER HET ZN A 901 1 HET QUS A 801 13 HET ZN B 902 1 HET ZN B 904 1 HET QUS B 802 13 HET ZN C 903 1 HET ZN C 905 1 HET QUS C 803 13 HETNAM ZN ZINC ION HETNAM QUS (S)-2-AMINO-3-(3,5-DIOXO-[1,2,4]OXADIAZOLIDIN-2-YL)- HETNAM 2 QUS PROPIONIC ACID HETSYN QUS QUISQUALATE FORMUL 4 ZN 5(ZN 2+) FORMUL 5 QUS 3(C5 H7 N3 O5) FORMUL 12 HOH *774(H2 O) HELIX 1 2 GLU A 27 GLU A 30 5 4 HELIX 2 3 GLY A 34 GLY A 48 1 15 HELIX 3 4 ASN A 72 TYR A 80 1 9 HELIX 4 5 THR A 93 GLU A 98 1 6 HELIX 5 6 SER A 123 LYS A 129 1 7 HELIX 6 7 GLY A 141 SER A 150 1 10 HELIX 7 8 ILE A 152 ALA A 165 1 14 HELIX 8 9 THR A 173 SER A 184 1 12 HELIX 9 10 SER A 194 GLN A 202 1 9 HELIX 10 11 LEU A 230 GLN A 244 1 15 HELIX 11 12 GLY A 245 TYR A 256 1 12 HELIX 12 13 GLY B 28 GLU B 30 5 3 HELIX 13 14 GLY B 34 GLY B 48 1 15 HELIX 14 15 ASN B 72 TYR B 80 1 9 HELIX 15 16 THR B 93 GLU B 98 1 6 HELIX 16 17 SER B 123 LYS B 129 1 7 HELIX 17 18 GLY B 141 SER B 150 1 10 HELIX 18 19 ILE B 152 ALA B 165 1 14 HELIX 19 20 THR B 173 SER B 184 1 12 HELIX 20 21 SER B 194 GLN B 202 1 9 HELIX 21 22 LEU B 230 GLN B 244 1 15 HELIX 22 23 GLY B 245 TRP B 255 1 11 HELIX 23 24 ASN C 22 LEU C 26 5 5 HELIX 24 26 GLY C 34 GLY C 48 1 15 HELIX 25 27 ASN C 72 TYR C 80 1 9 HELIX 26 28 THR C 93 GLU C 98 1 6 HELIX 27 29 SER C 123 GLN C 130 1 8 HELIX 28 30 GLY C 141 ARG C 149 1 9 HELIX 29 32 THR C 173 SER C 184 1 12 HELIX 30 33 SER C 194 GLN C 202 1 9 HELIX 31 34 LEU C 230 GLN C 244 1 15 HELIX 32 35 GLY C 245 TRP C 255 1 11 SHEET 1 A 3 TYR A 51 ILE A 55 0 SHEET 2 A 3 VAL A 6 THR A 10 1 N VAL A 8 O LYS A 52 SHEET 3 A 3 ILE A 85 ALA A 86 1 O ILE A 85 N THR A 9 SHEET 1 B 2 MET A 18 MET A 19 0 SHEET 2 B 2 TYR A 32 GLU A 33 -1 O GLU A 33 N MET A 18 SHEET 1 C 2 ILE A 100 PHE A 102 0 SHEET 2 C 2 ALA A 223 PRO A 225 -1 O THR A 224 N ASP A 101 SHEET 1 D 2 MET A 107 LEU A 109 0 SHEET 2 D 2 LYS A 218 TYR A 220 -1 O LYS A 218 N LEU A 109 SHEET 1 E 4 ALA A 134 GLY A 136 0 SHEET 2 E 4 TYR A 188 GLU A 193 1 O LEU A 191 N GLY A 136 SHEET 3 E 4 ILE A 111 LYS A 116 -1 N MET A 114 O TYR A 190 SHEET 4 E 4 THR A 208 VAL A 211 -1 O MET A 209 N ILE A 115 SHEET 1 F 3 TYR B 51 ILE B 55 0 SHEET 2 F 3 VAL B 6 THR B 10 1 N VAL B 8 O LYS B 52 SHEET 3 F 3 ILE B 85 ALA B 86 1 O ILE B 85 N THR B 9 SHEET 1 G 2 MET B 18 MET B 19 0 SHEET 2 G 2 TYR B 32 GLU B 33 -1 O GLU B 33 N MET B 18 SHEET 1 H 2 ILE B 100 PHE B 102 0 SHEET 2 H 2 ALA B 223 PRO B 225 -1 O THR B 224 N ASP B 101 SHEET 1 I 2 MET B 107 LEU B 109 0 SHEET 2 I 2 LYS B 218 TYR B 220 -1 O LYS B 218 N LEU B 109 SHEET 1 J 4 ALA B 134 GLY B 136 0 SHEET 2 J 4 TYR B 188 GLU B 193 1 O LEU B 191 N GLY B 136 SHEET 3 J 4 ILE B 111 LYS B 116 -1 N MET B 114 O TYR B 190 SHEET 4 J 4 THR B 208 VAL B 211 -1 O MET B 209 N ILE B 115 SHEET 1 K 3 TYR C 51 ILE C 55 0 SHEET 2 K 3 VAL C 6 THR C 10 1 N VAL C 8 O LYS C 52 SHEET 3 K 3 ILE C 85 ALA C 86 1 O ILE C 85 N THR C 9 SHEET 1 L 2 MET C 18 MET C 19 0 SHEET 2 L 2 TYR C 32 GLU C 33 -1 O GLU C 33 N MET C 18 SHEET 1 M 2 ILE C 100 PHE C 102 0 SHEET 2 M 2 ALA C 223 PRO C 225 -1 O THR C 224 N ASP C 101 SHEET 1 N 2 MET C 107 LEU C 109 0 SHEET 2 N 2 LYS C 218 TYR C 220 -1 O LYS C 218 N LEU C 109 SHEET 1 O 4 ALA C 134 GLY C 136 0 SHEET 2 O 4 TYR C 188 GLU C 193 1 O LEU C 191 N GLY C 136 SHEET 3 O 4 ILE C 111 LYS C 116 -1 N MET C 114 O TYR C 190 SHEET 4 O 4 THR C 208 VAL C 211 -1 O MET C 209 N ILE C 115 SSBOND 1 CYS A 206 CYS A 261 1555 1555 2.03 SSBOND 2 CYS B 206 CYS B 261 1555 1555 2.26 SSBOND 3 CYS C 206 CYS C 261 1555 1555 2.34 LINK ZN ZN A 901 OE1 GLU A 42 1555 1555 1.92 LINK ZN ZN A 901 NE2 HIS A 46 1555 1555 2.07 LINK ZN ZN A 901 OE1 GLU B 166 1555 1555 2.75 LINK ZN ZN A 901 OE2 GLU B 166 1555 1555 1.87 LINK ZN ZN A 901 O HOH A 923 1555 1555 2.16 LINK ZN ZN B 902 NE2 HIS B 23 1555 1555 1.96 LINK ZN ZN B 902 O HOH B1082 1555 1555 2.49 LINK ZN ZN B 902 OE2 GLU B 30 1555 1555 1.99 LINK ZN ZN B 904 NE2 HIS B 46 1555 1555 2.00 LINK ZN ZN B 904 O HOH B1036 1555 1555 2.12 LINK ZN ZN B 904 OE1 GLU B 42 1555 1555 1.96 LINK ZN ZN C 903 O HOH C1052 1555 1555 2.18 LINK ZN ZN C 903 OD2 ASP C 65 1555 1555 2.10 LINK ZN ZN C 905 O HOH C1030 1555 1555 2.77 LINK ZN ZN C 905 OE1 GLU C 42 1555 1555 2.34 LINK ZN ZN B 902 NE2 HIS C 23 1555 4557 2.07 LINK ZN ZN B 904 OE1 GLU A 166 1555 3657 2.70 LINK ZN ZN B 904 OE2 GLU A 166 1555 3657 2.03 LINK ZN ZN C 903 O HOH A1002 1555 4457 2.33 LINK ZN ZN C 903 NE2 HIS A 23 1555 4457 2.10 CISPEP 1 SER A 14 PRO A 15 0 0.84 CISPEP 2 GLU A 166 PRO A 167 0 -1.13 CISPEP 3 LYS A 204 PRO A 205 0 0.74 CISPEP 4 SER B 14 PRO B 15 0 1.36 CISPEP 5 GLU B 166 PRO B 167 0 -0.64 CISPEP 6 LYS B 204 PRO B 205 0 -0.33 CISPEP 7 SER C 14 PRO C 15 0 -0.39 CISPEP 8 GLU C 166 PRO C 167 0 -0.44 CISPEP 9 LYS C 204 PRO C 205 0 -0.87 SITE 1 AC1 4 GLU A 42 HIS A 46 HOH A 923 GLU B 166 SITE 1 AC2 4 HIS B 23 GLU B 30 HOH B1082 HIS C 23 SITE 1 AC3 4 HIS A 23 HOH A1002 ASP C 65 HOH C1052 SITE 1 AC4 6 GLU A 166 GLU B 42 LYS B 45 HIS B 46 SITE 2 AC4 6 LEU B 241 HOH B1036 SITE 1 AC5 4 GLU C 42 HIS C 46 GLN C 244 HOH C1030 SITE 1 AC6 14 TYR A 61 PRO A 89 LEU A 90 THR A 91 SITE 2 AC6 14 ARG A 96 LEU A 138 GLY A 141 SER A 142 SITE 3 AC6 14 THR A 143 LEU A 192 GLU A 193 MET A 196 SITE 4 AC6 14 HOH A 903 HOH A 928 SITE 1 AC7 15 TYR B 61 PRO B 89 LEU B 90 THR B 91 SITE 2 AC7 15 ARG B 96 LEU B 138 GLY B 141 SER B 142 SITE 3 AC7 15 THR B 143 LEU B 192 GLU B 193 MET B 196 SITE 4 AC7 15 HOH B 907 HOH B 915 HOH B 970 SITE 1 AC8 16 TYR C 61 PRO C 89 LEU C 90 THR C 91 SITE 2 AC8 16 ARG C 96 LEU C 138 GLY C 141 SER C 142 SITE 3 AC8 16 THR C 143 LEU C 192 GLU C 193 MET C 196 SITE 4 AC8 16 TYR C 220 HOH C 913 HOH C 932 HOH C 948 CRYST1 113.912 163.453 47.336 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008779 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006118 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021126 0.00000