HEADER TRANSFERASE 18-SEP-02 1MRL TITLE CRYSTAL STRUCTURE OF STREPTOGRAMIN A ACETYLTRANSFERASE WITH TITLE 2 DALFOPRISTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: STREPTOGRAMIN A ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.3.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECIUM; SOURCE 3 ORGANISM_TAXID: 1352; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: JM101; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PUC18 KEYWDS LEFT-HANDED PARALLEL BETA-HELIX DOMAIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.E.KEHOE,J.SNIDWONGSE,P.COURVALIN,J.B.RAFFERTY,I.A.MURRAY REVDAT 5 25-OCT-23 1MRL 1 REMARK REVDAT 4 13-JUL-11 1MRL 1 VERSN REVDAT 3 24-FEB-09 1MRL 1 VERSN REVDAT 2 09-SEP-03 1MRL 1 REMARK REVDAT 1 26-AUG-03 1MRL 0 JRNL AUTH L.E.KEHOE,J.SNIDWONGSE,P.COURVALIN,J.B.RAFFERTY,I.A.MURRAY JRNL TITL STRUCTURAL BASIS OF SYNERCID (QUINUPRISTIN-DALFOPRISTIN) JRNL TITL 2 RESISTANCE IN GRAM-POSITIVE BACTERIAL PATHOGENS JRNL REF J.BIOL.CHEM. V. 278 29963 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12771141 JRNL DOI 10.1074/JBC.M303766200 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.272 REMARK 3 R VALUE (WORKING SET) : 0.271 REMARK 3 FREE R VALUE : 0.304 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1329 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 76 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4744 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 144 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 40.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.39000 REMARK 3 B22 (A**2) : 2.27000 REMARK 3 B33 (A**2) : -3.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.844 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.442 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.340 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.871 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.856 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5047 ; 0.003 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6908 ; 1.597 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 625 ; 2.287 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 860 ;14.407 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 748 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3901 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2158 ; 0.254 ; 0.300 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 254 ; 0.134 ; 0.500 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 47 ; 0.393 ; 0.300 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.433 ; 0.500 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 204 4 REMARK 3 1 B 1 B 204 4 REMARK 3 1 C 1 C 204 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1543 ; 0.36 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 1543 ; 0.34 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 1543 ; 0.41 ; 0.50 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 204 REMARK 3 ORIGIN FOR THE GROUP (A): 27.7501 33.4643 65.5537 REMARK 3 T TENSOR REMARK 3 T11: 0.2382 T22: 0.3488 REMARK 3 T33: 0.1221 T12: 0.1151 REMARK 3 T13: 0.0121 T23: -0.0243 REMARK 3 L TENSOR REMARK 3 L11: 1.8975 L22: 4.7596 REMARK 3 L33: 2.1421 L12: -2.1922 REMARK 3 L13: 0.2222 L23: -0.5606 REMARK 3 S TENSOR REMARK 3 S11: -0.4449 S12: -0.7046 S13: 0.0760 REMARK 3 S21: 0.8252 S22: 0.5413 S23: -0.0866 REMARK 3 S31: -0.0362 S32: 0.2440 S33: -0.0964 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 204 REMARK 3 ORIGIN FOR THE GROUP (A): 20.5968 46.1507 36.8565 REMARK 3 T TENSOR REMARK 3 T11: 0.1485 T22: 0.0854 REMARK 3 T33: 0.1497 T12: 0.0039 REMARK 3 T13: 0.0391 T23: 0.0616 REMARK 3 L TENSOR REMARK 3 L11: 1.4222 L22: 2.9532 REMARK 3 L33: 2.9608 L12: -1.5213 REMARK 3 L13: -0.3625 L23: 0.9158 REMARK 3 S TENSOR REMARK 3 S11: 0.1731 S12: 0.1968 S13: 0.1998 REMARK 3 S21: -0.3552 S22: -0.0968 S23: -0.0788 REMARK 3 S31: -0.4300 S32: 0.0593 S33: -0.0762 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 204 REMARK 3 ORIGIN FOR THE GROUP (A): 33.5787 16.7767 38.4944 REMARK 3 T TENSOR REMARK 3 T11: 0.1107 T22: 0.0862 REMARK 3 T33: 0.2021 T12: 0.0976 REMARK 3 T13: 0.0161 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 1.8390 L22: 2.3995 REMARK 3 L33: 4.2921 L12: -1.1284 REMARK 3 L13: 0.0393 L23: 0.4035 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: 0.0638 S13: -0.2287 REMARK 3 S21: -0.1546 S22: -0.0204 S23: -0.0649 REMARK 3 S31: 0.3793 S32: 0.3253 S33: 0.0083 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1MRL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-SEP-02. REMARK 100 THE DEPOSITION ID IS D_1000017130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX9.6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8700 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20118 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.87 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1MR7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM FLUORIDE, 20% W/V PEG REMARK 280 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 41.45700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.26450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.45250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.26450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 41.45700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.45250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL TRIMER REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -56.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 205 REMARK 465 ILE A 206 REMARK 465 TRP A 207 REMARK 465 LYS A 208 REMARK 465 LYS A 209 REMARK 465 VAL B 205 REMARK 465 ILE B 206 REMARK 465 TRP B 207 REMARK 465 LYS B 208 REMARK 465 LYS B 209 REMARK 465 VAL C 205 REMARK 465 ILE C 206 REMARK 465 TRP C 207 REMARK 465 LYS C 208 REMARK 465 LYS C 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 GLU A 25 CG CD OE1 OE2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LYS A 60 CG CD CE NZ REMARK 470 LYS A 62 CG CD CE NZ REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 LYS A 133 CG CD CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 ARG A 203 CG CD NE CZ NH1 NH2 REMARK 470 MET B 6 CG SD CE REMARK 470 GLU B 12 CG CD OE1 OE2 REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 LYS B 100 CG CD CE NZ REMARK 470 LYS B 111 CG CD CE NZ REMARK 470 GLU B 191 CG CD OE1 OE2 REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 ARG B 203 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 7 CG CD CE NZ REMARK 470 LYS C 15 CG CD CE NZ REMARK 470 LYS C 26 CG CD CE NZ REMARK 470 LYS C 60 CG CD CE NZ REMARK 470 LYS C 104 CG CD CE NZ REMARK 470 MET C 129 CG SD CE REMARK 470 GLU C 191 CG CD OE1 OE2 REMARK 470 LYS C 195 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 136 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 14 90.70 -162.63 REMARK 500 LYS A 15 30.24 -86.61 REMARK 500 TYR A 35 -16.07 73.22 REMARK 500 HIS A 101 42.58 -89.05 REMARK 500 ARG A 203 -72.35 -80.71 REMARK 500 ASN B 14 87.04 -169.20 REMARK 500 LYS B 15 34.02 -80.73 REMARK 500 TYR B 35 -22.47 71.83 REMARK 500 ASN B 42 21.71 -140.91 REMARK 500 HIS B 101 37.35 -97.44 REMARK 500 PRO B 109 152.59 -49.96 REMARK 500 ASN C 14 89.19 -151.41 REMARK 500 TYR C 35 -12.40 68.77 REMARK 500 ASN C 42 10.70 -141.10 REMARK 500 ASN C 92 -32.44 -33.24 REMARK 500 ARG C 203 48.45 -107.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DOL A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DOL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DOL C 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1MR7 RELATED DB: PDB REMARK 900 1MR7 CONTAINS FREE ENZYME STRUCTURE OF STREPTOGRAMIN A REMARK 900 ACETYLTRANSFERASE REMARK 900 RELATED ID: 1MR9 RELATED DB: PDB REMARK 900 1MR9 CONTAINS CRYSTAL STRUCTURE OF THE SAME PROTEIN WITH ACO DBREF 1MRL A 1 209 UNP P50870 VATD_ENTFC 1 209 DBREF 1MRL B 1 209 UNP P50870 VATD_ENTFC 1 209 DBREF 1MRL C 1 209 UNP P50870 VATD_ENTFC 1 209 SEQRES 1 A 209 MET GLY PRO ASN PRO MET LYS MET TYR PRO ILE GLU GLY SEQRES 2 A 209 ASN LYS SER VAL GLN PHE ILE LYS PRO ILE LEU GLU LYS SEQRES 3 A 209 LEU GLU ASN VAL GLU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 A 209 SER LYS ASN GLY GLU THR PHE ASP LYS GLN ILE LEU TYR SEQRES 5 A 209 HIS TYR PRO ILE LEU ASN ASP LYS LEU LYS ILE GLY LYS SEQRES 6 A 209 PHE CYS SER ILE GLY PRO GLY VAL THR ILE ILE MET ASN SEQRES 7 A 209 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 A 209 ASN LEU PHE GLY ASN GLY TRP GLU LYS HIS MET PRO LYS SEQRES 9 A 209 LEU ASP GLN LEU PRO ILE LYS GLY ASP THR ILE ILE GLY SEQRES 10 A 209 ASN ASP VAL TRP ILE GLY LYS ASP VAL VAL ILE MET PRO SEQRES 11 A 209 GLY VAL LYS ILE GLY ASP GLY ALA ILE VAL ALA ALA ASN SEQRES 12 A 209 SER VAL VAL VAL LYS ASP ILE ALA PRO TYR MET LEU ALA SEQRES 13 A 209 GLY GLY ASN PRO ALA ASN GLU ILE LYS GLN ARG PHE ASP SEQRES 14 A 209 GLN ASP THR ILE ASN GLN LEU LEU ASP ILE LYS TRP TRP SEQRES 15 A 209 ASN TRP PRO ILE ASP ILE ILE ASN GLU ASN ILE ASP LYS SEQRES 16 A 209 ILE LEU ASP ASN SER ILE ILE ARG GLU VAL ILE TRP LYS SEQRES 17 A 209 LYS SEQRES 1 B 209 MET GLY PRO ASN PRO MET LYS MET TYR PRO ILE GLU GLY SEQRES 2 B 209 ASN LYS SER VAL GLN PHE ILE LYS PRO ILE LEU GLU LYS SEQRES 3 B 209 LEU GLU ASN VAL GLU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 B 209 SER LYS ASN GLY GLU THR PHE ASP LYS GLN ILE LEU TYR SEQRES 5 B 209 HIS TYR PRO ILE LEU ASN ASP LYS LEU LYS ILE GLY LYS SEQRES 6 B 209 PHE CYS SER ILE GLY PRO GLY VAL THR ILE ILE MET ASN SEQRES 7 B 209 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 B 209 ASN LEU PHE GLY ASN GLY TRP GLU LYS HIS MET PRO LYS SEQRES 9 B 209 LEU ASP GLN LEU PRO ILE LYS GLY ASP THR ILE ILE GLY SEQRES 10 B 209 ASN ASP VAL TRP ILE GLY LYS ASP VAL VAL ILE MET PRO SEQRES 11 B 209 GLY VAL LYS ILE GLY ASP GLY ALA ILE VAL ALA ALA ASN SEQRES 12 B 209 SER VAL VAL VAL LYS ASP ILE ALA PRO TYR MET LEU ALA SEQRES 13 B 209 GLY GLY ASN PRO ALA ASN GLU ILE LYS GLN ARG PHE ASP SEQRES 14 B 209 GLN ASP THR ILE ASN GLN LEU LEU ASP ILE LYS TRP TRP SEQRES 15 B 209 ASN TRP PRO ILE ASP ILE ILE ASN GLU ASN ILE ASP LYS SEQRES 16 B 209 ILE LEU ASP ASN SER ILE ILE ARG GLU VAL ILE TRP LYS SEQRES 17 B 209 LYS SEQRES 1 C 209 MET GLY PRO ASN PRO MET LYS MET TYR PRO ILE GLU GLY SEQRES 2 C 209 ASN LYS SER VAL GLN PHE ILE LYS PRO ILE LEU GLU LYS SEQRES 3 C 209 LEU GLU ASN VAL GLU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 C 209 SER LYS ASN GLY GLU THR PHE ASP LYS GLN ILE LEU TYR SEQRES 5 C 209 HIS TYR PRO ILE LEU ASN ASP LYS LEU LYS ILE GLY LYS SEQRES 6 C 209 PHE CYS SER ILE GLY PRO GLY VAL THR ILE ILE MET ASN SEQRES 7 C 209 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 C 209 ASN LEU PHE GLY ASN GLY TRP GLU LYS HIS MET PRO LYS SEQRES 9 C 209 LEU ASP GLN LEU PRO ILE LYS GLY ASP THR ILE ILE GLY SEQRES 10 C 209 ASN ASP VAL TRP ILE GLY LYS ASP VAL VAL ILE MET PRO SEQRES 11 C 209 GLY VAL LYS ILE GLY ASP GLY ALA ILE VAL ALA ALA ASN SEQRES 12 C 209 SER VAL VAL VAL LYS ASP ILE ALA PRO TYR MET LEU ALA SEQRES 13 C 209 GLY GLY ASN PRO ALA ASN GLU ILE LYS GLN ARG PHE ASP SEQRES 14 C 209 GLN ASP THR ILE ASN GLN LEU LEU ASP ILE LYS TRP TRP SEQRES 15 C 209 ASN TRP PRO ILE ASP ILE ILE ASN GLU ASN ILE ASP LYS SEQRES 16 C 209 ILE LEU ASP ASN SER ILE ILE ARG GLU VAL ILE TRP LYS SEQRES 17 C 209 LYS HET DOL A 300 48 HET DOL B 301 48 HET DOL C 302 48 HETNAM DOL 5-(2-DIETHYLAMINO-ETHANESULFONYL)-21-HYDROXY-10- HETNAM 2 DOL ISOPROPYL-11,19-DIMETHYL-9,26-DIOXA-3,15,28-TRIAZA- HETNAM 3 DOL TRICYCLO[23.2.1.00,255]OCTACOSA-1(27),12,17,19,25(28)- HETNAM 4 DOL PENTAENE-2,8,14,23-TETRAONE HETSYN DOL DALFOPRISTIN FORMUL 4 DOL 3(C34 H50 N4 O9 S) HELIX 1 1 ILE A 20 LEU A 24 1 5 HELIX 2 2 THR A 45 LYS A 48 5 4 HELIX 3 3 TYR A 54 ASN A 58 5 5 HELIX 4 4 ASN A 78 ASN A 81 5 4 HELIX 5 5 PRO A 90 GLY A 95 5 6 HELIX 6 6 GLY A 97 MET A 102 5 6 HELIX 7 7 ASP A 169 LYS A 180 1 12 HELIX 8 8 TRP A 181 TRP A 184 5 4 HELIX 9 9 PRO A 185 GLU A 191 1 7 HELIX 10 10 ASN A 192 ASP A 198 1 7 HELIX 11 11 ASN A 199 ARG A 203 5 5 HELIX 12 12 ILE B 20 GLU B 25 1 6 HELIX 13 13 THR B 45 LYS B 48 5 4 HELIX 14 14 ASN B 78 ASN B 81 5 4 HELIX 15 15 PRO B 90 GLY B 95 5 6 HELIX 16 16 GLY B 97 MET B 102 5 6 HELIX 17 17 ASP B 169 LYS B 180 1 12 HELIX 18 18 TRP B 181 TRP B 184 5 4 HELIX 19 19 PRO B 185 GLU B 191 1 7 HELIX 20 20 ASN B 192 ASP B 198 1 7 HELIX 21 21 ASN B 199 GLU B 204 5 6 HELIX 22 22 ILE C 20 GLU C 25 1 6 HELIX 23 23 THR C 45 LYS C 48 5 4 HELIX 24 24 TYR C 54 ASN C 58 5 5 HELIX 25 25 ASN C 78 ASN C 81 5 4 HELIX 26 26 PRO C 90 GLY C 95 5 6 HELIX 27 27 GLY C 97 MET C 102 5 6 HELIX 28 28 LYS C 104 LEU C 108 5 5 HELIX 29 29 ASP C 169 ASP C 178 1 10 HELIX 30 30 LYS C 180 TRP C 184 5 5 HELIX 31 31 PRO C 185 GLU C 191 1 7 HELIX 32 32 ASN C 192 ASP C 198 1 7 HELIX 33 33 ASN C 199 GLU C 204 5 6 SHEET 1 A 7 VAL A 17 PHE A 19 0 SHEET 2 A 7 TYR A 37 ASP A 39 -1 O TYR A 38 N GLN A 18 SHEET 3 A 7 SER A 68 ILE A 69 1 O ILE A 69 N TYR A 37 SHEET 4 A 7 TRP A 121 ILE A 122 1 O ILE A 122 N SER A 68 SHEET 5 A 7 ILE A 139 VAL A 140 1 O VAL A 140 N TRP A 121 SHEET 6 A 7 MET A 154 GLY A 157 1 O MET A 154 N ILE A 139 SHEET 7 A 7 ASN A 162 GLN A 166 -1 O ILE A 164 N LEU A 155 SHEET 1 B 4 VAL A 30 VAL A 32 0 SHEET 2 B 4 LEU A 61 ILE A 63 1 O ILE A 63 N GLU A 31 SHEET 3 B 4 THR A 114 ILE A 116 1 O ILE A 116 N LYS A 62 SHEET 4 B 4 LYS A 133 ILE A 134 1 O ILE A 134 N ILE A 115 SHEET 1 C 4 ILE A 50 LEU A 51 0 SHEET 2 C 4 THR A 74 ILE A 76 1 O ILE A 75 N LEU A 51 SHEET 3 C 4 VAL A 127 ILE A 128 1 O ILE A 128 N THR A 74 SHEET 4 C 4 VAL A 145 VAL A 146 1 O VAL A 146 N VAL A 127 SHEET 1 D 7 VAL B 17 PHE B 19 0 SHEET 2 D 7 TYR B 37 ASP B 39 -1 O TYR B 38 N GLN B 18 SHEET 3 D 7 SER B 68 ILE B 69 1 O ILE B 69 N TYR B 37 SHEET 4 D 7 TRP B 121 ILE B 122 1 O ILE B 122 N SER B 68 SHEET 5 D 7 ILE B 139 VAL B 140 1 O VAL B 140 N TRP B 121 SHEET 6 D 7 MET B 154 GLY B 157 1 O MET B 154 N ILE B 139 SHEET 7 D 7 ASN B 162 GLN B 166 -1 O ILE B 164 N LEU B 155 SHEET 1 E 4 VAL B 30 VAL B 32 0 SHEET 2 E 4 LEU B 61 ILE B 63 1 O ILE B 63 N GLU B 31 SHEET 3 E 4 THR B 114 ILE B 116 1 O ILE B 116 N LYS B 62 SHEET 4 E 4 LYS B 133 ILE B 134 1 O ILE B 134 N ILE B 115 SHEET 1 F 4 ILE B 50 LEU B 51 0 SHEET 2 F 4 THR B 74 ILE B 76 1 O ILE B 75 N LEU B 51 SHEET 3 F 4 VAL B 127 ILE B 128 1 O ILE B 128 N THR B 74 SHEET 4 F 4 VAL B 145 VAL B 146 1 O VAL B 146 N VAL B 127 SHEET 1 G 7 VAL C 17 PHE C 19 0 SHEET 2 G 7 TYR C 37 ASP C 39 -1 O TYR C 38 N GLN C 18 SHEET 3 G 7 SER C 68 ILE C 69 1 O ILE C 69 N TYR C 37 SHEET 4 G 7 TRP C 121 ILE C 122 1 O ILE C 122 N SER C 68 SHEET 5 G 7 ILE C 139 VAL C 140 1 O VAL C 140 N TRP C 121 SHEET 6 G 7 MET C 154 GLY C 157 1 O MET C 154 N ILE C 139 SHEET 7 G 7 ASN C 162 GLN C 166 -1 O ILE C 164 N LEU C 155 SHEET 1 H 4 VAL C 30 VAL C 32 0 SHEET 2 H 4 LEU C 61 ILE C 63 1 O LEU C 61 N GLU C 31 SHEET 3 H 4 THR C 114 ILE C 116 1 O ILE C 116 N LYS C 62 SHEET 4 H 4 LYS C 133 ILE C 134 1 O ILE C 134 N ILE C 115 SHEET 1 I 4 ILE C 50 LEU C 51 0 SHEET 2 I 4 THR C 74 ILE C 76 1 O ILE C 75 N LEU C 51 SHEET 3 I 4 VAL C 127 ILE C 128 1 O ILE C 128 N THR C 74 SHEET 4 I 4 VAL C 145 VAL C 146 1 O VAL C 146 N VAL C 127 CISPEP 1 ASN A 159 PRO A 160 0 2.30 CISPEP 2 ASN B 159 PRO B 160 0 0.66 CISPEP 3 ASN C 159 PRO C 160 0 2.45 SITE 1 AC1 11 TYR A 54 ILE A 56 ASN A 81 HIS A 82 SITE 2 AC1 11 LEU A 93 MET A 102 PRO A 103 LEU A 108 SITE 3 AC1 11 ASN B 14 TYR B 37 ASP B 39 SITE 1 AC2 12 LEU A 105 ASP A 106 TYR B 54 ASN B 81 SITE 2 AC2 12 HIS B 82 LEU B 93 MET B 102 LEU B 108 SITE 3 AC2 12 ASN C 14 VAL C 17 TYR C 37 ASP C 39 SITE 1 AC3 9 TYR A 37 ASP A 39 LYS B 148 ASN B 162 SITE 2 AC3 9 ASN C 81 HIS C 82 LEU C 93 MET C 102 SITE 3 AC3 9 LEU C 108 CRYST1 82.914 90.905 104.529 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012061 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009567 0.00000