HEADER TRANSFERASE 09-OCT-02 1MZO TITLE CRYSTAL STRUCTURE OF PYRUVATE FORMATE-LYASE WITH PYRUVATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PYRUVATE FORMATE-LYASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FORMATE ACETYLTRANSFERASE 1; COMPND 5 EC: 2.3.1.54; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PKK223-3 KEYWDS ENZYME-SUBSTRATE COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.LEHTIO,V.-M.LEPPANEN,J.W.KOZARICH,A.GOLDMAN REVDAT 4 15-NOV-23 1MZO 1 ATOM REVDAT 3 25-OCT-23 1MZO 1 REMARK REVDAT 2 24-FEB-09 1MZO 1 VERSN REVDAT 1 11-DEC-02 1MZO 0 JRNL AUTH L.LEHTIO,V.M.LEPPANEN,J.W.KOZARICH,A.GOLDMAN JRNL TITL STRUCTURE OF ESCHERICHIA COLI PYRUVATE FORMATE-LYASE WITH JRNL TITL 2 PYRUVATE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 58 2209 2002 JRNL REFN ISSN 0907-4449 JRNL PMID 12454503 JRNL DOI 10.1107/S0907444902016402 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 55885 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 2715 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11930 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 515 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 9 OF THE POLYETHYLENE GLYCOL ATOMS WERE INCLUDED IN REFINEMENT AND REMARK 3 ATOM REMARK 3 O1 ADDED AFTERWARDS ON SYMMETRY AXIS WITH 0.5 OCCUPANCY REMARK 4 REMARK 4 1MZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 11-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-00 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9102 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55923 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2PFL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.95 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG1000, MOPS, AMMONIUM CHLORIDE, NA REMARK 280 -PYRUVATE, DTT, MAGNESIUM CHLORIDE, EDTA, PH 7.3, MICRODIALYSIS, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.65000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 79.17750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 79.17750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 119.47500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 79.17750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 79.17750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 39.82500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 79.17750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 79.17750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 119.47500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 79.17750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 79.17750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.82500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 79.65000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 O1 PGE A1001 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 SER B 1 REMARK 465 GLU B 2 REMARK 465 LEU B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C1 PGE A 1001 O1 PGE A 1001 8776 1.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 24 84.29 -151.35 REMARK 500 LYS A 31 45.14 -108.81 REMARK 500 ASN A 32 -28.94 -158.33 REMARK 500 ASP A 39 -157.98 -118.00 REMARK 500 ASP A 72 159.57 178.09 REMARK 500 ASN A 90 91.96 -174.51 REMARK 500 THR A 101 -162.25 -115.34 REMARK 500 ILE A 110 78.20 -112.95 REMARK 500 THR A 138 -40.04 -134.46 REMARK 500 PRO A 169 60.07 -65.87 REMARK 500 ALA A 171 32.21 -140.79 REMARK 500 LEU A 213 -63.99 -26.32 REMARK 500 MET A 274 75.67 -118.10 REMARK 500 ASN A 401 92.08 -68.87 REMARK 500 CYS A 418 -98.48 65.09 REMARK 500 VAL A 420 14.28 -140.73 REMARK 500 ALA A 434 -138.59 55.16 REMARK 500 SER A 505 47.13 -156.40 REMARK 500 ALA A 554 98.77 -69.93 REMARK 500 THR A 605 -32.44 -135.00 REMARK 500 ILE A 606 -144.10 62.08 REMARK 500 HIS A 637 111.97 -35.68 REMARK 500 LEU A 705 115.90 -162.19 REMARK 500 ASN A 721 64.02 -110.94 REMARK 500 GLU A 723 -6.99 -54.53 REMARK 500 SER A 733 3.79 -174.87 REMARK 500 ASN B 24 84.85 -151.23 REMARK 500 LYS B 31 44.31 -109.05 REMARK 500 ASN B 32 -28.71 -157.38 REMARK 500 ASP B 39 -158.63 -117.25 REMARK 500 ASP B 72 159.35 178.12 REMARK 500 ASN B 90 91.71 -175.27 REMARK 500 THR B 101 -161.87 -115.70 REMARK 500 ILE B 110 78.16 -112.97 REMARK 500 THR B 138 -40.48 -134.44 REMARK 500 TYR B 140 -60.04 -96.12 REMARK 500 PRO B 169 60.52 -65.86 REMARK 500 ALA B 171 31.92 -140.82 REMARK 500 LEU B 213 -63.34 -26.25 REMARK 500 MET B 274 73.68 -118.28 REMARK 500 ASN B 401 92.48 -68.79 REMARK 500 CYS B 418 -98.46 65.66 REMARK 500 VAL B 420 14.12 -140.51 REMARK 500 ALA B 434 -139.82 53.40 REMARK 500 SER B 505 46.52 -155.31 REMARK 500 ALA B 542 -175.86 -170.39 REMARK 500 ALA B 554 98.61 -69.09 REMARK 500 THR B 605 -32.62 -134.74 REMARK 500 ILE B 606 -144.25 62.35 REMARK 500 HIS B 637 112.55 -35.55 REMARK 500 REMARK 500 THIS ENTRY HAS 54 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 TYR B 181 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PYR B 2002 DBREF 1MZO A 1 759 UNP P09373 PFLB_ECOLI 1 759 DBREF 1MZO B 1 759 UNP P09373 PFLB_ECOLI 1 759 SEQRES 1 A 759 SER GLU LEU ASN GLU LYS LEU ALA THR ALA TRP GLU GLY SEQRES 2 A 759 PHE THR LYS GLY ASP TRP GLN ASN GLU VAL ASN VAL ARG SEQRES 3 A 759 ASP PHE ILE GLN LYS ASN TYR THR PRO TYR GLU GLY ASP SEQRES 4 A 759 GLU SER PHE LEU ALA GLY ALA THR GLU ALA THR THR THR SEQRES 5 A 759 LEU TRP ASP LYS VAL MET GLU GLY VAL LYS LEU GLU ASN SEQRES 6 A 759 ARG THR HIS ALA PRO VAL ASP PHE ASP THR ALA VAL ALA SEQRES 7 A 759 SER THR ILE THR SER HIS ASP ALA GLY TYR ILE ASN LYS SEQRES 8 A 759 GLN LEU GLU LYS ILE VAL GLY LEU GLN THR GLU ALA PRO SEQRES 9 A 759 LEU LYS ARG ALA LEU ILE PRO PHE GLY GLY ILE LYS MET SEQRES 10 A 759 ILE GLU GLY SER CYS LYS ALA TYR ASN ARG GLU LEU ASP SEQRES 11 A 759 PRO MET ILE LYS LYS ILE PHE THR GLU TYR ARG LYS THR SEQRES 12 A 759 HIS ASN GLN GLY VAL PHE ASP VAL TYR THR PRO ASP ILE SEQRES 13 A 759 LEU ARG CYS ARG LYS SER GLY VAL LEU THR GLY LEU PRO SEQRES 14 A 759 ASP ALA TYR GLY ARG GLY ARG ILE ILE GLY ASP TYR ARG SEQRES 15 A 759 ARG VAL ALA LEU TYR GLY ILE ASP TYR LEU MET LYS ASP SEQRES 16 A 759 LYS LEU ALA GLN PHE THR SER LEU GLN ALA ASP LEU GLU SEQRES 17 A 759 ASN GLY VAL ASN LEU GLU GLN THR ILE ARG LEU ARG GLU SEQRES 18 A 759 GLU ILE ALA GLU GLN HIS ARG ALA LEU GLY GLN MET LYS SEQRES 19 A 759 GLU MET ALA ALA LYS TYR GLY TYR ASP ILE SER GLY PRO SEQRES 20 A 759 ALA THR ASN ALA GLN GLU ALA ILE GLN TRP THR TYR PHE SEQRES 21 A 759 GLY TYR LEU ALA ALA VAL LYS SER GLN ASN GLY ALA ALA SEQRES 22 A 759 MET SER PHE GLY ARG THR SER THR PHE LEU ASP VAL TYR SEQRES 23 A 759 ILE GLU ARG ASP LEU LYS ALA GLY LYS ILE THR GLU GLN SEQRES 24 A 759 GLU ALA GLN GLU MET VAL ASP HIS LEU VAL MET LYS LEU SEQRES 25 A 759 ARG MET VAL ARG PHE LEU ARG THR PRO GLU TYR ASP GLU SEQRES 26 A 759 LEU PHE SER GLY ASP PRO ILE TRP ALA THR GLU SER ILE SEQRES 27 A 759 GLY GLY MET GLY LEU ASP GLY ARG THR LEU VAL THR LYS SEQRES 28 A 759 ASN SER PHE ARG PHE LEU ASN THR LEU TYR THR MET GLY SEQRES 29 A 759 PRO SER PRO GLU PRO ASN MET THR ILE LEU TRP SER GLU SEQRES 30 A 759 LYS LEU PRO LEU ASN PHE LYS LYS PHE ALA ALA LYS VAL SEQRES 31 A 759 SER ILE ASP THR SER SER LEU GLN TYR GLU ASN ASP ASP SEQRES 32 A 759 LEU MET ARG PRO ASP PHE ASN ASN ASP ASP TYR ALA ILE SEQRES 33 A 759 ALA CYS CYS VAL SER PRO MET ILE VAL GLY LYS GLN MET SEQRES 34 A 759 GLN PHE PHE GLY ALA ARG ALA ASN LEU ALA LYS THR MET SEQRES 35 A 759 LEU TYR ALA ILE ASN GLY GLY VAL ASP GLU LYS LEU LYS SEQRES 36 A 759 MET GLN VAL GLY PRO LYS SER GLU PRO ILE LYS GLY ASP SEQRES 37 A 759 VAL LEU ASN TYR ASP GLU VAL MET GLU ARG MET ASP HIS SEQRES 38 A 759 PHE MET ASP TRP LEU ALA LYS GLN TYR ILE THR ALA LEU SEQRES 39 A 759 ASN ILE ILE HIS TYR MET HIS ASP LYS TYR SER TYR GLU SEQRES 40 A 759 ALA SER LEU MET ALA LEU HIS ASP ARG ASP VAL ILE ARG SEQRES 41 A 759 THR MET ALA CYS GLY ILE ALA GLY LEU SER VAL ALA ALA SEQRES 42 A 759 ASP SER LEU SER ALA ILE LYS TYR ALA LYS VAL LYS PRO SEQRES 43 A 759 ILE ARG ASP GLU ASP GLY LEU ALA ILE ASP PHE GLU ILE SEQRES 44 A 759 GLU GLY GLU TYR PRO GLN PHE GLY ASN ASN ASP PRO ARG SEQRES 45 A 759 VAL ASP ASP LEU ALA VAL ASP LEU VAL GLU ARG PHE MET SEQRES 46 A 759 LYS LYS ILE GLN LYS LEU HIS THR TYR ARG ASP ALA ILE SEQRES 47 A 759 PRO THR GLN SER VAL LEU THR ILE THR SER ASN VAL VAL SEQRES 48 A 759 TYR GLY LYS LYS THR GLY ASN THR PRO ASP GLY ARG ARG SEQRES 49 A 759 ALA GLY ALA PRO PHE GLY PRO GLY ALA ASN PRO MET HIS SEQRES 50 A 759 GLY ARG ASP GLN LYS GLY ALA VAL ALA SER LEU THR SER SEQRES 51 A 759 VAL ALA LYS LEU PRO PHE ALA TYR ALA LYS ASP GLY ILE SEQRES 52 A 759 SER TYR THR PHE SER ILE VAL PRO ASN ALA LEU GLY LYS SEQRES 53 A 759 ASP ASP GLU VAL ARG LYS THR ASN LEU ALA GLY LEU MET SEQRES 54 A 759 ASP GLY TYR PHE HIS HIS GLU ALA SER ILE GLU GLY GLY SEQRES 55 A 759 GLN HIS LEU ASN VAL ASN VAL MET ASN ARG GLU MET LEU SEQRES 56 A 759 LEU ASP ALA MET GLU ASN PRO GLU LYS TYR PRO GLN LEU SEQRES 57 A 759 THR ILE ARG VAL SER GLY TYR ALA VAL ARG PHE ASN SER SEQRES 58 A 759 LEU THR LYS GLU GLN GLN GLN ASP VAL ILE THR ARG THR SEQRES 59 A 759 PHE THR GLN SER MET SEQRES 1 B 759 SER GLU LEU ASN GLU LYS LEU ALA THR ALA TRP GLU GLY SEQRES 2 B 759 PHE THR LYS GLY ASP TRP GLN ASN GLU VAL ASN VAL ARG SEQRES 3 B 759 ASP PHE ILE GLN LYS ASN TYR THR PRO TYR GLU GLY ASP SEQRES 4 B 759 GLU SER PHE LEU ALA GLY ALA THR GLU ALA THR THR THR SEQRES 5 B 759 LEU TRP ASP LYS VAL MET GLU GLY VAL LYS LEU GLU ASN SEQRES 6 B 759 ARG THR HIS ALA PRO VAL ASP PHE ASP THR ALA VAL ALA SEQRES 7 B 759 SER THR ILE THR SER HIS ASP ALA GLY TYR ILE ASN LYS SEQRES 8 B 759 GLN LEU GLU LYS ILE VAL GLY LEU GLN THR GLU ALA PRO SEQRES 9 B 759 LEU LYS ARG ALA LEU ILE PRO PHE GLY GLY ILE LYS MET SEQRES 10 B 759 ILE GLU GLY SER CYS LYS ALA TYR ASN ARG GLU LEU ASP SEQRES 11 B 759 PRO MET ILE LYS LYS ILE PHE THR GLU TYR ARG LYS THR SEQRES 12 B 759 HIS ASN GLN GLY VAL PHE ASP VAL TYR THR PRO ASP ILE SEQRES 13 B 759 LEU ARG CYS ARG LYS SER GLY VAL LEU THR GLY LEU PRO SEQRES 14 B 759 ASP ALA TYR GLY ARG GLY ARG ILE ILE GLY ASP TYR ARG SEQRES 15 B 759 ARG VAL ALA LEU TYR GLY ILE ASP TYR LEU MET LYS ASP SEQRES 16 B 759 LYS LEU ALA GLN PHE THR SER LEU GLN ALA ASP LEU GLU SEQRES 17 B 759 ASN GLY VAL ASN LEU GLU GLN THR ILE ARG LEU ARG GLU SEQRES 18 B 759 GLU ILE ALA GLU GLN HIS ARG ALA LEU GLY GLN MET LYS SEQRES 19 B 759 GLU MET ALA ALA LYS TYR GLY TYR ASP ILE SER GLY PRO SEQRES 20 B 759 ALA THR ASN ALA GLN GLU ALA ILE GLN TRP THR TYR PHE SEQRES 21 B 759 GLY TYR LEU ALA ALA VAL LYS SER GLN ASN GLY ALA ALA SEQRES 22 B 759 MET SER PHE GLY ARG THR SER THR PHE LEU ASP VAL TYR SEQRES 23 B 759 ILE GLU ARG ASP LEU LYS ALA GLY LYS ILE THR GLU GLN SEQRES 24 B 759 GLU ALA GLN GLU MET VAL ASP HIS LEU VAL MET LYS LEU SEQRES 25 B 759 ARG MET VAL ARG PHE LEU ARG THR PRO GLU TYR ASP GLU SEQRES 26 B 759 LEU PHE SER GLY ASP PRO ILE TRP ALA THR GLU SER ILE SEQRES 27 B 759 GLY GLY MET GLY LEU ASP GLY ARG THR LEU VAL THR LYS SEQRES 28 B 759 ASN SER PHE ARG PHE LEU ASN THR LEU TYR THR MET GLY SEQRES 29 B 759 PRO SER PRO GLU PRO ASN MET THR ILE LEU TRP SER GLU SEQRES 30 B 759 LYS LEU PRO LEU ASN PHE LYS LYS PHE ALA ALA LYS VAL SEQRES 31 B 759 SER ILE ASP THR SER SER LEU GLN TYR GLU ASN ASP ASP SEQRES 32 B 759 LEU MET ARG PRO ASP PHE ASN ASN ASP ASP TYR ALA ILE SEQRES 33 B 759 ALA CYS CYS VAL SER PRO MET ILE VAL GLY LYS GLN MET SEQRES 34 B 759 GLN PHE PHE GLY ALA ARG ALA ASN LEU ALA LYS THR MET SEQRES 35 B 759 LEU TYR ALA ILE ASN GLY GLY VAL ASP GLU LYS LEU LYS SEQRES 36 B 759 MET GLN VAL GLY PRO LYS SER GLU PRO ILE LYS GLY ASP SEQRES 37 B 759 VAL LEU ASN TYR ASP GLU VAL MET GLU ARG MET ASP HIS SEQRES 38 B 759 PHE MET ASP TRP LEU ALA LYS GLN TYR ILE THR ALA LEU SEQRES 39 B 759 ASN ILE ILE HIS TYR MET HIS ASP LYS TYR SER TYR GLU SEQRES 40 B 759 ALA SER LEU MET ALA LEU HIS ASP ARG ASP VAL ILE ARG SEQRES 41 B 759 THR MET ALA CYS GLY ILE ALA GLY LEU SER VAL ALA ALA SEQRES 42 B 759 ASP SER LEU SER ALA ILE LYS TYR ALA LYS VAL LYS PRO SEQRES 43 B 759 ILE ARG ASP GLU ASP GLY LEU ALA ILE ASP PHE GLU ILE SEQRES 44 B 759 GLU GLY GLU TYR PRO GLN PHE GLY ASN ASN ASP PRO ARG SEQRES 45 B 759 VAL ASP ASP LEU ALA VAL ASP LEU VAL GLU ARG PHE MET SEQRES 46 B 759 LYS LYS ILE GLN LYS LEU HIS THR TYR ARG ASP ALA ILE SEQRES 47 B 759 PRO THR GLN SER VAL LEU THR ILE THR SER ASN VAL VAL SEQRES 48 B 759 TYR GLY LYS LYS THR GLY ASN THR PRO ASP GLY ARG ARG SEQRES 49 B 759 ALA GLY ALA PRO PHE GLY PRO GLY ALA ASN PRO MET HIS SEQRES 50 B 759 GLY ARG ASP GLN LYS GLY ALA VAL ALA SER LEU THR SER SEQRES 51 B 759 VAL ALA LYS LEU PRO PHE ALA TYR ALA LYS ASP GLY ILE SEQRES 52 B 759 SER TYR THR PHE SER ILE VAL PRO ASN ALA LEU GLY LYS SEQRES 53 B 759 ASP ASP GLU VAL ARG LYS THR ASN LEU ALA GLY LEU MET SEQRES 54 B 759 ASP GLY TYR PHE HIS HIS GLU ALA SER ILE GLU GLY GLY SEQRES 55 B 759 GLN HIS LEU ASN VAL ASN VAL MET ASN ARG GLU MET LEU SEQRES 56 B 759 LEU ASP ALA MET GLU ASN PRO GLU LYS TYR PRO GLN LEU SEQRES 57 B 759 THR ILE ARG VAL SER GLY TYR ALA VAL ARG PHE ASN SER SEQRES 58 B 759 LEU THR LYS GLU GLN GLN GLN ASP VAL ILE THR ARG THR SEQRES 59 B 759 PHE THR GLN SER MET HET PGE A1001 10 HET PYR A2001 6 HET PYR B2002 6 HETNAM PGE TRIETHYLENE GLYCOL HETNAM PYR PYRUVIC ACID FORMUL 3 PGE C6 H14 O4 FORMUL 4 PYR 2(C3 H4 O3) FORMUL 6 HOH *515(H2 O) HELIX 1 1 ASN A 4 TRP A 11 1 8 HELIX 2 2 GLY A 17 ASN A 21 5 5 HELIX 3 3 ASN A 24 LYS A 31 1 8 HELIX 4 4 THR A 47 HIS A 68 1 22 HELIX 5 5 ILE A 110 GLY A 113 5 4 HELIX 6 6 GLY A 114 TYR A 125 1 12 HELIX 7 7 ASP A 130 TYR A 140 1 11 HELIX 8 8 THR A 143 TYR A 152 1 10 HELIX 9 9 THR A 153 SER A 162 1 10 HELIX 10 10 TYR A 181 LEU A 203 1 23 HELIX 11 11 LEU A 203 ASN A 209 1 7 HELIX 12 12 ASN A 212 TYR A 240 1 29 HELIX 13 13 ASN A 250 GLN A 269 1 20 HELIX 14 14 THR A 279 ALA A 293 1 15 HELIX 15 15 THR A 297 ARG A 313 1 17 HELIX 16 16 THR A 320 PHE A 327 1 8 HELIX 17 17 THR A 350 ASN A 358 1 9 HELIX 18 18 ASN A 358 MET A 363 1 6 HELIX 19 19 PRO A 380 SER A 395 1 16 HELIX 20 20 ASP A 402 ASN A 410 1 9 HELIX 21 21 LEU A 438 ASN A 447 1 10 HELIX 22 22 ASN A 471 SER A 505 1 35 HELIX 23 23 GLU A 507 ALA A 512 1 6 HELIX 24 24 GLY A 528 TYR A 541 1 14 HELIX 25 25 ASP A 570 GLN A 589 1 20 HELIX 26 26 THR A 593 ALA A 597 5 5 HELIX 27 27 THR A 607 LYS A 615 1 9 HELIX 28 28 GLY A 643 LEU A 654 1 12 HELIX 29 29 VAL A 670 GLY A 675 5 6 HELIX 30 30 ASP A 677 PHE A 693 1 17 HELIX 31 31 ASN A 711 ASN A 721 1 11 HELIX 32 32 PRO A 722 TYR A 725 5 4 HELIX 33 33 ASN A 740 LEU A 742 5 3 HELIX 34 34 THR A 743 THR A 752 1 10 HELIX 35 35 ASN B 4 TRP B 11 1 8 HELIX 36 36 GLY B 17 ASN B 21 5 5 HELIX 37 37 ASN B 24 LYS B 31 1 8 HELIX 38 38 ASP B 39 LEU B 43 5 5 HELIX 39 39 THR B 47 HIS B 68 1 22 HELIX 40 40 ILE B 110 GLY B 113 5 4 HELIX 41 41 GLY B 114 TYR B 125 1 12 HELIX 42 42 ASP B 130 TYR B 140 1 11 HELIX 43 43 THR B 143 TYR B 152 1 10 HELIX 44 44 THR B 153 SER B 162 1 10 HELIX 45 45 TYR B 181 LEU B 203 1 23 HELIX 46 46 LEU B 203 ASN B 209 1 7 HELIX 47 47 ASN B 212 TYR B 240 1 29 HELIX 48 48 ASN B 250 GLN B 269 1 20 HELIX 49 49 THR B 279 ALA B 293 1 15 HELIX 50 50 THR B 297 ARG B 313 1 17 HELIX 51 51 THR B 320 PHE B 327 1 8 HELIX 52 52 THR B 350 ASN B 358 1 9 HELIX 53 53 ASN B 358 MET B 363 1 6 HELIX 54 54 PRO B 380 SER B 395 1 16 HELIX 55 55 ASP B 402 ASN B 410 1 9 HELIX 56 56 LEU B 438 ASN B 447 1 10 HELIX 57 57 ASN B 471 SER B 505 1 35 HELIX 58 58 GLU B 507 ALA B 512 1 6 HELIX 59 59 GLY B 528 TYR B 541 1 14 HELIX 60 60 ASP B 570 GLN B 589 1 20 HELIX 61 61 THR B 593 ALA B 597 5 5 HELIX 62 62 THR B 607 LYS B 615 1 9 HELIX 63 63 GLY B 643 LYS B 653 1 11 HELIX 64 64 VAL B 670 GLY B 675 5 6 HELIX 65 65 ASP B 677 PHE B 693 1 17 HELIX 66 66 ASN B 711 ASN B 721 1 11 HELIX 67 67 PRO B 722 TYR B 725 5 4 HELIX 68 68 ASN B 740 LEU B 742 5 3 HELIX 69 69 THR B 743 THR B 752 1 10 SHEET 1 A 2 ASP A 72 ALA A 78 0 SHEET 2 A 2 LYS A 106 LEU A 109 1 O ARG A 107 N ASP A 72 SHEET 1 B 5 THR A 335 GLY A 339 0 SHEET 2 B 5 ASN A 370 TRP A 375 1 O THR A 372 N ILE A 338 SHEET 3 B 5 GLN A 398 ASN A 401 1 O GLN A 398 N ILE A 373 SHEET 4 B 5 HIS A 704 VAL A 709 -1 O LEU A 705 N TYR A 399 SHEET 5 B 5 THR A 666 ILE A 669 1 N ILE A 669 O ASN A 708 SHEET 1 C 2 TYR A 414 ALA A 417 0 SHEET 2 C 2 SER A 421 ILE A 424 -1 O SER A 421 N ALA A 417 SHEET 1 D 4 GLY A 662 ILE A 663 0 SHEET 2 D 4 ILE A 598 VAL A 603 1 N VAL A 603 O GLY A 662 SHEET 3 D 4 ILE A 519 ALA A 527 1 N CYS A 524 O THR A 600 SHEET 4 D 4 GLN A 428 PHE A 431 1 N PHE A 431 O THR A 521 SHEET 1 E 4 GLY A 662 ILE A 663 0 SHEET 2 E 4 ILE A 598 VAL A 603 1 N VAL A 603 O GLY A 662 SHEET 3 E 4 ILE A 519 ALA A 527 1 N CYS A 524 O THR A 600 SHEET 4 E 4 ALA A 436 ASN A 437 1 N ALA A 436 O GLY A 525 SHEET 1 F 2 LYS A 543 ARG A 548 0 SHEET 2 F 2 ALA A 554 GLU A 560 -1 O GLU A 558 N LYS A 545 SHEET 1 G 2 THR A 729 ARG A 731 0 SHEET 2 G 2 ALA A 736 ARG A 738 -1 O VAL A 737 N ILE A 730 SHEET 1 H 2 ASP B 72 ALA B 78 0 SHEET 2 H 2 LYS B 106 LEU B 109 1 O ARG B 107 N ASP B 72 SHEET 1 I 5 THR B 335 GLY B 339 0 SHEET 2 I 5 ASN B 370 TRP B 375 1 O THR B 372 N ILE B 338 SHEET 3 I 5 GLN B 398 ASN B 401 1 O GLN B 398 N ILE B 373 SHEET 4 I 5 HIS B 704 VAL B 709 -1 O LEU B 705 N TYR B 399 SHEET 5 I 5 THR B 666 ILE B 669 1 N ILE B 669 O ASN B 708 SHEET 1 J 2 TYR B 414 ALA B 417 0 SHEET 2 J 2 SER B 421 ILE B 424 -1 O SER B 421 N ALA B 417 SHEET 1 K 3 ILE B 598 SER B 602 0 SHEET 2 K 3 ILE B 519 ALA B 527 1 N CYS B 524 O THR B 600 SHEET 3 K 3 GLN B 428 PHE B 431 1 N PHE B 431 O THR B 521 SHEET 1 L 3 ILE B 598 SER B 602 0 SHEET 2 L 3 ILE B 519 ALA B 527 1 N CYS B 524 O THR B 600 SHEET 3 L 3 ARG B 435 ASN B 437 1 N ALA B 436 O GLY B 525 SHEET 1 M 2 LYS B 543 ARG B 548 0 SHEET 2 M 2 ALA B 554 GLU B 560 -1 O GLU B 558 N LYS B 545 SHEET 1 N 2 THR B 729 ARG B 731 0 SHEET 2 N 2 ALA B 736 ARG B 738 -1 O VAL B 737 N ILE B 730 CISPEP 1 GLU A 368 PRO A 369 0 -0.03 CISPEP 2 GLU B 368 PRO B 369 0 -0.31 SITE 1 AC1 4 ALA A 238 LYS A 239 TYR A 240 GLY A 241 SITE 1 AC2 9 ARG A 176 ALA A 273 PHE A 327 CYS A 418 SITE 2 AC2 9 PHE A 432 ARG A 435 LEU A 604 ILE A 606 SITE 3 AC2 9 HOH A2010 SITE 1 AC3 9 ARG B 176 ALA B 272 ALA B 273 CYS B 418 SITE 2 AC3 9 PHE B 432 ARG B 435 LEU B 604 ILE B 606 SITE 3 AC3 9 HOH B2012 CRYST1 158.355 158.355 159.300 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006315 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006315 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006277 0.00000