data_1N1F # _entry.id 1N1F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1N1F RCSB RCSB017398 WWPDB D_1000017398 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1N1F _pdbx_database_status.recvd_initial_deposition_date 2002-10-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chang, C.' 1 'Magracheva, E.' 2 'Kozlov, S.' 3 'Fong, S.' 4 'Tobin, G.' 5 'Kotenko, S.' 6 'Wlodawer, A.' 7 'Zdanov, A.' 8 # _citation.id primary _citation.title 'Crystal structure of interleukin-19 defines a new subfamily of helical cytokines' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 3308 _citation.page_last 3313 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12403790 _citation.pdbx_database_id_DOI 10.1074/jbc.M208602200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chang, C.' 1 ? primary 'Magracheva, E.' 2 ? primary 'Kozlov, S.' 3 ? primary 'Fong, S.' 4 ? primary 'Tobin, G.' 5 ? primary 'Kotenko, S.' 6 ? primary 'Wlodawer, A.' 7 ? primary 'Zdanov, A.' 8 ? # _cell.entry_id 1N1F _cell.length_a 30.657 _cell.length_b 52.974 _cell.length_c 93.474 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1N1F _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man interleukin-19 18389.088 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'IL-19, Melanoma differentiation associated protein-like protein, NG.1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SVDNHGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKDHQEPNP KILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMSSA ; _entity_poly.pdbx_seq_one_letter_code_can ;SVDNHGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKDHQEPNP KILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMSSA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 VAL n 1 3 ASP n 1 4 ASN n 1 5 HIS n 1 6 GLY n 1 7 LEU n 1 8 ARG n 1 9 ARG n 1 10 CYS n 1 11 LEU n 1 12 ILE n 1 13 SER n 1 14 THR n 1 15 ASP n 1 16 MET n 1 17 HIS n 1 18 HIS n 1 19 ILE n 1 20 GLU n 1 21 GLU n 1 22 SER n 1 23 PHE n 1 24 GLN n 1 25 GLU n 1 26 ILE n 1 27 LYS n 1 28 ARG n 1 29 ALA n 1 30 ILE n 1 31 GLN n 1 32 ALA n 1 33 LYS n 1 34 ASP n 1 35 THR n 1 36 PHE n 1 37 PRO n 1 38 ASN n 1 39 VAL n 1 40 THR n 1 41 ILE n 1 42 LEU n 1 43 SER n 1 44 THR n 1 45 LEU n 1 46 GLU n 1 47 THR n 1 48 LEU n 1 49 GLN n 1 50 ILE n 1 51 ILE n 1 52 LYS n 1 53 PRO n 1 54 LEU n 1 55 ASP n 1 56 VAL n 1 57 CYS n 1 58 CYS n 1 59 VAL n 1 60 THR n 1 61 LYS n 1 62 ASN n 1 63 LEU n 1 64 LEU n 1 65 ALA n 1 66 PHE n 1 67 TYR n 1 68 VAL n 1 69 ASP n 1 70 ARG n 1 71 VAL n 1 72 PHE n 1 73 LYS n 1 74 ASP n 1 75 HIS n 1 76 GLN n 1 77 GLU n 1 78 PRO n 1 79 ASN n 1 80 PRO n 1 81 LYS n 1 82 ILE n 1 83 LEU n 1 84 ARG n 1 85 LYS n 1 86 ILE n 1 87 SER n 1 88 SER n 1 89 ILE n 1 90 ALA n 1 91 ASN n 1 92 SER n 1 93 PHE n 1 94 LEU n 1 95 TYR n 1 96 MET n 1 97 GLN n 1 98 LYS n 1 99 THR n 1 100 LEU n 1 101 ARG n 1 102 GLN n 1 103 CYS n 1 104 GLN n 1 105 GLU n 1 106 GLN n 1 107 ARG n 1 108 GLN n 1 109 CYS n 1 110 HIS n 1 111 CYS n 1 112 ARG n 1 113 GLN n 1 114 GLU n 1 115 ALA n 1 116 THR n 1 117 ASN n 1 118 ALA n 1 119 THR n 1 120 ARG n 1 121 VAL n 1 122 ILE n 1 123 HIS n 1 124 ASP n 1 125 ASN n 1 126 TYR n 1 127 ASP n 1 128 GLN n 1 129 LEU n 1 130 GLU n 1 131 VAL n 1 132 HIS n 1 133 ALA n 1 134 ALA n 1 135 ALA n 1 136 ILE n 1 137 LYS n 1 138 SER n 1 139 LEU n 1 140 GLY n 1 141 GLU n 1 142 LEU n 1 143 ASP n 1 144 VAL n 1 145 PHE n 1 146 LEU n 1 147 ALA n 1 148 TRP n 1 149 ILE n 1 150 ASN n 1 151 LYS n 1 152 ASN n 1 153 HIS n 1 154 GLU n 1 155 VAL n 1 156 MET n 1 157 SER n 1 158 SER n 1 159 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fruit fly' _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus Drosophila _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'Schneider-2 (S2)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector 'constitutive pAc5.1/V5-HisA vector' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IL19_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SVDNHGLRRCLISTDMHHIEESFQEIKRAIQAKDTFPNVTILSTLETLQIIKPLDVCCVTKNLLAFYVDRVFKDHQEPNP KILRKISSIANSFLYMQKTLRQCQEQRQCHCRQEATNATRVIHDNYDQLEVHAAAIKSLGELDVFLAWINKNHEVMSSA ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_accession Q9UHD0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1N1F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 159 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9UHD0 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 177 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 159 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1N1F _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.06 _exptl_crystal.density_percent_sol 40.39 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.9 _exptl_crystal_grow.pdbx_details '1.9M Ammonium sulfate, 2% PEG400, 100mM HEPES, pH 6.9, VAPOR DIFFUSION, HANGING DROP, temperature 273K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-03-22 _diffrn_detector.details 'OSMIC mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1N1F _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 45 _reflns.d_resolution_high 1.95 _reflns.number_obs 10404 _reflns.number_all 11673 _reflns.percent_possible_obs 87.9 _reflns.pdbx_Rmerge_I_obs 0.065 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.8 _reflns.B_iso_Wilson_estimate 21.7 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.02 _reflns_shell.percent_possible_all 62.3 _reflns_shell.Rmerge_I_obs 0.268 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1N1F _refine.ls_number_reflns_obs 10259 _refine.ls_number_reflns_all 11673 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_d_res_low 45.00 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 87.8 _refine.ls_R_factor_obs 0.156 _refine.ls_R_factor_all 0.165 _refine.ls_R_factor_R_work 0.156 _refine.ls_R_factor_R_free 0.243 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.3 _refine.ls_number_reflns_R_free 1055 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.0 _refine.aniso_B[1][1] -7.10 _refine.aniso_B[2][2] 6.54 _refine.aniso_B[3][3] 0.56 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.378043 _refine.solvent_model_param_bsol 85.1553 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1N1F _refine_analyze.Luzzati_coordinate_error_obs 0.17 _refine_analyze.Luzzati_sigma_a_obs 0.22 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.27 _refine_analyze.Luzzati_sigma_a_free 0.31 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1213 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 1391 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 45.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.9 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.05 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 5.79 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 6.32 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 7.76 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 9.54 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 2.07 _refine_ls_shell.number_reflns_R_work 1196 _refine_ls_shell.R_factor_R_work 0.254 _refine_ls_shell.percent_reflns_obs 69.9 _refine_ls_shell.R_factor_R_free 0.352 _refine_ls_shell.R_factor_R_free_error 0.032 _refine_ls_shell.percent_reflns_R_free 9.4 _refine_ls_shell.number_reflns_R_free 124 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 3 CARBOHYDRATE.PARAM CARBOHYDRATE.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 1N1F _struct.title 'Crystal Structure of Human Interleukin-19' _struct.pdbx_descriptor Interleukin-19 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1N1F _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text 'cytokine, interleukin, four helix bundle, immune system' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 4 ? ARG A 9 ? ASN A 4 ARG A 9 5 ? 6 HELX_P HELX_P2 2 ASP A 15 ? ALA A 32 ? ASP A 15 ALA A 32 1 ? 18 HELX_P HELX_P3 3 LEU A 42 ? THR A 47 ? LEU A 42 THR A 47 5 ? 6 HELX_P HELX_P4 4 LYS A 52 ? ARG A 70 ? LYS A 52 ARG A 70 1 ? 19 HELX_P HELX_P5 5 ARG A 70 ? HIS A 75 ? ARG A 70 HIS A 75 1 ? 6 HELX_P HELX_P6 6 ASN A 79 ? GLN A 104 ? ASN A 79 GLN A 104 1 ? 26 HELX_P HELX_P7 7 ARG A 112 ? LEU A 129 ? ARG A 112 LEU A 129 1 ? 18 HELX_P HELX_P8 8 GLU A 130 ? GLU A 141 ? GLU A 130 GLU A 141 1 ? 12 HELX_P HELX_P9 9 GLU A 141 ? HIS A 153 ? GLU A 141 HIS A 153 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 103 SG ? ? A CYS 10 A CYS 103 1_555 ? ? ? ? ? ? ? 2.024 ? ? disulf2 disulf ? ? A CYS 57 SG ? ? ? 1_555 A CYS 109 SG ? ? A CYS 57 A CYS 109 1_555 ? ? ? ? ? ? ? 2.022 ? ? disulf3 disulf ? ? A CYS 58 SG ? ? ? 1_555 A CYS 111 SG ? ? A CYS 58 A CYS 111 1_555 ? ? ? ? ? ? ? 2.015 ? ? covale1 covale one ? A ASN 38 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 38 A NAG 300 1_555 ? ? ? ? ? ? ? 1.455 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _database_PDB_matrix.entry_id 1N1F _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1N1F _atom_sites.fract_transf_matrix[1][1] 0.032619 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018877 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010698 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 VAL 2 2 ? ? ? A . n A 1 3 ASP 3 3 ? ? ? A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ARG 8 8 8 ARG ALA A . n A 1 9 ARG 9 9 9 ARG ALA A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 GLU 21 21 21 GLU ALA A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 ASP 34 34 34 ASP ASP A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 CYS 58 58 58 CYS CYS A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 PHE 72 72 72 PHE PHE A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 PRO 80 80 80 PRO PRO A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 PHE 93 93 93 PHE PHE A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 MET 96 96 96 MET MET A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 CYS 103 103 103 CYS CYS A . n A 1 104 GLN 104 104 104 GLN ALA A . n A 1 105 GLU 105 105 ? ? ? A . n A 1 106 GLN 106 106 ? ? ? A . n A 1 107 ARG 107 107 ? ? ? A . n A 1 108 GLN 108 108 108 GLN ALA A . n A 1 109 CYS 109 109 109 CYS CYS A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 CYS 111 111 111 CYS CYS A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 GLN 113 113 113 GLN GLN A . n A 1 114 GLU 114 114 114 GLU GLU A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 HIS 123 123 123 HIS HIS A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 GLN 128 128 128 GLN GLN A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 HIS 132 132 132 HIS HIS A . n A 1 133 ALA 133 133 133 ALA ALA A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLU 141 141 141 GLU GLU A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 PHE 145 145 145 PHE PHE A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 ALA 147 147 147 ALA ALA A . n A 1 148 TRP 148 148 148 TRP TRP A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 LYS 151 151 151 LYS LYS A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 HIS 153 153 153 HIS HIS A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 ALA 159 159 159 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 300 300 NAG NAG A . C 3 HOH 1 501 501 HOH WAT A . C 3 HOH 2 502 502 HOH WAT A . C 3 HOH 3 503 503 HOH WAT A . C 3 HOH 4 504 504 HOH WAT A . C 3 HOH 5 505 505 HOH WAT A . C 3 HOH 6 506 506 HOH WAT A . C 3 HOH 7 507 507 HOH WAT A . C 3 HOH 8 508 508 HOH WAT A . C 3 HOH 9 509 509 HOH WAT A . C 3 HOH 10 510 510 HOH WAT A . C 3 HOH 11 511 511 HOH WAT A . C 3 HOH 12 512 512 HOH WAT A . C 3 HOH 13 513 513 HOH WAT A . C 3 HOH 14 514 514 HOH WAT A . C 3 HOH 15 515 515 HOH WAT A . C 3 HOH 16 516 516 HOH WAT A . C 3 HOH 17 517 517 HOH WAT A . C 3 HOH 18 518 518 HOH WAT A . C 3 HOH 19 519 519 HOH WAT A . C 3 HOH 20 520 520 HOH WAT A . C 3 HOH 21 521 521 HOH WAT A . C 3 HOH 22 522 522 HOH WAT A . C 3 HOH 23 523 523 HOH WAT A . C 3 HOH 24 524 524 HOH WAT A . C 3 HOH 25 525 525 HOH WAT A . C 3 HOH 26 526 526 HOH WAT A . C 3 HOH 27 527 527 HOH WAT A . C 3 HOH 28 528 528 HOH WAT A . C 3 HOH 29 529 529 HOH WAT A . C 3 HOH 30 530 530 HOH WAT A . C 3 HOH 31 531 531 HOH WAT A . C 3 HOH 32 532 532 HOH WAT A . C 3 HOH 33 533 533 HOH WAT A . C 3 HOH 34 534 534 HOH WAT A . C 3 HOH 35 535 535 HOH WAT A . C 3 HOH 36 536 536 HOH WAT A . C 3 HOH 37 537 537 HOH WAT A . C 3 HOH 38 538 538 HOH WAT A . C 3 HOH 39 539 539 HOH WAT A . C 3 HOH 40 540 540 HOH WAT A . C 3 HOH 41 541 541 HOH WAT A . C 3 HOH 42 542 542 HOH WAT A . C 3 HOH 43 543 543 HOH WAT A . C 3 HOH 44 544 544 HOH WAT A . C 3 HOH 45 545 545 HOH WAT A . C 3 HOH 46 546 546 HOH WAT A . C 3 HOH 47 547 547 HOH WAT A . C 3 HOH 48 548 548 HOH WAT A . C 3 HOH 49 549 549 HOH WAT A . C 3 HOH 50 550 550 HOH WAT A . C 3 HOH 51 551 551 HOH WAT A . C 3 HOH 52 552 552 HOH WAT A . C 3 HOH 53 553 553 HOH WAT A . C 3 HOH 54 554 554 HOH WAT A . C 3 HOH 55 555 555 HOH WAT A . C 3 HOH 56 556 556 HOH WAT A . C 3 HOH 57 557 557 HOH WAT A . C 3 HOH 58 558 558 HOH WAT A . C 3 HOH 59 559 559 HOH WAT A . C 3 HOH 60 560 560 HOH WAT A . C 3 HOH 61 561 561 HOH WAT A . C 3 HOH 62 562 562 HOH WAT A . C 3 HOH 63 563 563 HOH WAT A . C 3 HOH 64 564 564 HOH WAT A . C 3 HOH 65 565 565 HOH WAT A . C 3 HOH 66 566 566 HOH WAT A . C 3 HOH 67 567 567 HOH WAT A . C 3 HOH 68 568 568 HOH WAT A . C 3 HOH 69 569 569 HOH WAT A . C 3 HOH 70 570 570 HOH WAT A . C 3 HOH 71 571 571 HOH WAT A . C 3 HOH 72 572 572 HOH WAT A . C 3 HOH 73 573 573 HOH WAT A . C 3 HOH 74 574 574 HOH WAT A . C 3 HOH 75 575 575 HOH WAT A . C 3 HOH 76 576 576 HOH WAT A . C 3 HOH 77 577 577 HOH WAT A . C 3 HOH 78 578 578 HOH WAT A . C 3 HOH 79 579 579 HOH WAT A . C 3 HOH 80 580 580 HOH WAT A . C 3 HOH 81 581 581 HOH WAT A . C 3 HOH 82 582 582 HOH WAT A . C 3 HOH 83 583 583 HOH WAT A . C 3 HOH 84 584 584 HOH WAT A . C 3 HOH 85 585 585 HOH WAT A . C 3 HOH 86 586 586 HOH WAT A . C 3 HOH 87 587 587 HOH WAT A . C 3 HOH 88 588 588 HOH WAT A . C 3 HOH 89 589 589 HOH WAT A . C 3 HOH 90 590 590 HOH WAT A . C 3 HOH 91 591 591 HOH WAT A . C 3 HOH 92 592 592 HOH WAT A . C 3 HOH 93 593 593 HOH WAT A . C 3 HOH 94 594 594 HOH WAT A . C 3 HOH 95 595 595 HOH WAT A . C 3 HOH 96 596 596 HOH WAT A . C 3 HOH 97 597 597 HOH WAT A . C 3 HOH 98 598 598 HOH WAT A . C 3 HOH 99 599 599 HOH WAT A . C 3 HOH 100 600 600 HOH WAT A . C 3 HOH 101 601 601 HOH WAT A . C 3 HOH 102 602 602 HOH WAT A . C 3 HOH 103 603 603 HOH WAT A . C 3 HOH 104 604 604 HOH WAT A . C 3 HOH 105 605 605 HOH WAT A . C 3 HOH 106 606 606 HOH WAT A . C 3 HOH 107 607 607 HOH WAT A . C 3 HOH 108 608 608 HOH WAT A . C 3 HOH 109 609 609 HOH WAT A . C 3 HOH 110 610 610 HOH WAT A . C 3 HOH 111 611 611 HOH WAT A . C 3 HOH 112 612 612 HOH WAT A . C 3 HOH 113 613 613 HOH WAT A . C 3 HOH 114 614 614 HOH WAT A . C 3 HOH 115 615 615 HOH WAT A . C 3 HOH 116 616 616 HOH WAT A . C 3 HOH 117 617 617 HOH WAT A . C 3 HOH 118 618 618 HOH WAT A . C 3 HOH 119 619 619 HOH WAT A . C 3 HOH 120 620 620 HOH WAT A . C 3 HOH 121 621 621 HOH WAT A . C 3 HOH 122 622 622 HOH WAT A . C 3 HOH 123 623 623 HOH WAT A . C 3 HOH 124 624 624 HOH WAT A . C 3 HOH 125 625 625 HOH WAT A . C 3 HOH 126 626 626 HOH WAT A . C 3 HOH 127 627 627 HOH WAT A . C 3 HOH 128 628 628 HOH WAT A . C 3 HOH 129 629 629 HOH WAT A . C 3 HOH 130 630 630 HOH WAT A . C 3 HOH 131 631 631 HOH WAT A . C 3 HOH 132 632 632 HOH WAT A . C 3 HOH 133 633 633 HOH WAT A . C 3 HOH 134 634 634 HOH WAT A . C 3 HOH 135 635 635 HOH WAT A . C 3 HOH 136 636 636 HOH WAT A . C 3 HOH 137 637 637 HOH WAT A . C 3 HOH 138 638 638 HOH WAT A . C 3 HOH 139 639 639 HOH WAT A . C 3 HOH 140 640 640 HOH WAT A . C 3 HOH 141 641 641 HOH WAT A . C 3 HOH 142 642 642 HOH WAT A . C 3 HOH 143 643 643 HOH WAT A . C 3 HOH 144 644 644 HOH WAT A . C 3 HOH 145 645 645 HOH WAT A . C 3 HOH 146 646 646 HOH WAT A . C 3 HOH 147 647 647 HOH WAT A . C 3 HOH 148 648 648 HOH WAT A . C 3 HOH 149 649 649 HOH WAT A . C 3 HOH 150 650 650 HOH WAT A . C 3 HOH 151 651 651 HOH WAT A . C 3 HOH 152 652 652 HOH WAT A . C 3 HOH 153 653 653 HOH WAT A . C 3 HOH 154 654 654 HOH WAT A . C 3 HOH 155 655 655 HOH WAT A . C 3 HOH 156 656 656 HOH WAT A . C 3 HOH 157 657 657 HOH WAT A . C 3 HOH 158 658 658 HOH WAT A . C 3 HOH 159 659 659 HOH WAT A . C 3 HOH 160 660 660 HOH WAT A . C 3 HOH 161 661 661 HOH WAT A . C 3 HOH 162 662 662 HOH WAT A . C 3 HOH 163 663 663 HOH WAT A . C 3 HOH 164 664 664 HOH WAT A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id ASN _pdbx_struct_mod_residue.label_seq_id 38 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id ASN _pdbx_struct_mod_residue.auth_seq_id 38 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ASN _pdbx_struct_mod_residue.details 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-02-04 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp 2 4 'Structure model' entity 3 4 'Structure model' pdbx_chem_comp_identifier 4 4 'Structure model' pdbx_entity_nonpoly 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site 7 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_chem_comp.name' 2 4 'Structure model' '_chem_comp.type' 3 4 'Structure model' '_entity.pdbx_description' 4 4 'Structure model' '_pdbx_entity_nonpoly.name' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 4 'Structure model' '_struct_conn.pdbx_role' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement 1.0 ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 7 ? ? -57.28 -5.87 2 1 LEU A 42 ? ? -79.83 43.07 3 1 CYS A 103 ? ? -65.75 -104.05 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 8 ? CG ? A ARG 8 CG 2 1 Y 1 A ARG 8 ? CD ? A ARG 8 CD 3 1 Y 1 A ARG 8 ? NE ? A ARG 8 NE 4 1 Y 1 A ARG 8 ? CZ ? A ARG 8 CZ 5 1 Y 1 A ARG 8 ? NH1 ? A ARG 8 NH1 6 1 Y 1 A ARG 8 ? NH2 ? A ARG 8 NH2 7 1 Y 1 A ARG 9 ? CG ? A ARG 9 CG 8 1 Y 1 A ARG 9 ? CD ? A ARG 9 CD 9 1 Y 1 A ARG 9 ? NE ? A ARG 9 NE 10 1 Y 1 A ARG 9 ? CZ ? A ARG 9 CZ 11 1 Y 1 A ARG 9 ? NH1 ? A ARG 9 NH1 12 1 Y 1 A ARG 9 ? NH2 ? A ARG 9 NH2 13 1 Y 1 A GLU 21 ? CG ? A GLU 21 CG 14 1 Y 1 A GLU 21 ? CD ? A GLU 21 CD 15 1 Y 1 A GLU 21 ? OE1 ? A GLU 21 OE1 16 1 Y 1 A GLU 21 ? OE2 ? A GLU 21 OE2 17 1 Y 1 A GLN 104 ? CG ? A GLN 104 CG 18 1 Y 1 A GLN 104 ? CD ? A GLN 104 CD 19 1 Y 1 A GLN 104 ? OE1 ? A GLN 104 OE1 20 1 Y 1 A GLN 104 ? NE2 ? A GLN 104 NE2 21 1 Y 1 A GLN 108 ? CG ? A GLN 108 CG 22 1 Y 1 A GLN 108 ? CD ? A GLN 108 CD 23 1 Y 1 A GLN 108 ? OE1 ? A GLN 108 OE1 24 1 Y 1 A GLN 108 ? NE2 ? A GLN 108 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A VAL 2 ? A VAL 2 3 1 Y 1 A ASP 3 ? A ASP 3 4 1 Y 1 A GLU 105 ? A GLU 105 5 1 Y 1 A GLN 106 ? A GLN 106 6 1 Y 1 A ARG 107 ? A ARG 107 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH #