HEADER LIGASE 28-OCT-02 1N3L TITLE CRYSTAL STRUCTURE OF A HUMAN AMINOACYL-TRNA SYNTHETASE CYTOKINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSYL-TRNA SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: MINI TYRRS; COMPND 5 EC: 6.1.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ROSSMANN FOLD AS CATALYTIC DOMAIN, UNIQUE ANTICODON RECOGNITION KEYWDS 2 DOMAIN, DIMER, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR X.-L.YANG,R.J.SKENE,D.E.MCREE,P.SCHIMMEL REVDAT 4 14-FEB-24 1N3L 1 REMARK SEQADV REVDAT 3 13-JUL-11 1N3L 1 VERSN REVDAT 2 24-FEB-09 1N3L 1 VERSN REVDAT 1 20-NOV-02 1N3L 0 JRNL AUTH X.-L.YANG,R.J.SKENE,D.E.MCREE,P.SCHIMMEL JRNL TITL CRYSTAL STRUCTURE OF A HUMAN AMINOACYL-TRNA SYNTHETASE JRNL TITL 2 CYTOKINE JRNL REF PROC.NATL.ACAD.SCI.USA V. 99 15369 2002 JRNL REFN ISSN 0027-8424 JRNL PMID 12427973 JRNL DOI 10.1073/PNAS.242611799 REMARK 2 REMARK 2 RESOLUTION. 1.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.180 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.180 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 6310 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 124326 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : NULL REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2633 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 316 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : NULL REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : NULL REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : NULL REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : NULL REMARK 3 NUMBER OF RESTRAINTS : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.014 REMARK 3 ANGLE DISTANCES (A) : 0.032 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : NULL REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : NULL REMARK 3 ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : NULL REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : NULL REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : NULL REMARK 3 SIMILAR ADP COMPONENTS (A**2) : NULL REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH & HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1N3L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-OCT-02. REMARK 100 THE DEPOSITION ID IS D_1000017475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.38 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9800 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 134129 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.180 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.9 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : 0.05400 REMARK 200 FOR THE DATA SET : 55.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.18 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69900 REMARK 200 R SYM FOR SHELL (I) : 0.69900 REMARK 200 FOR SHELL : 1.004 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (NH4)2SO4, NAH2PO4, K2HPO4, ACETONE, REMARK 280 PH 6.38, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 279K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 37.29750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 81.19600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.29750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 81.19600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE OTHER MONOMER OF THE DIMER IS GENERATED BY THE TWO FOLD REMARK 300 AXIS: -X, -Y, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 149.19000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2154 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2242 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 LYS A 222 REMARK 465 MET A 223 REMARK 465 SER A 224 REMARK 465 SER A 225 REMARK 465 SER A 226 REMARK 465 GLU A 227 REMARK 465 GLU A 228 REMARK 465 ASP A 343 REMARK 465 PRO A 344 REMARK 465 SER A 345 REMARK 465 LYS A 346 REMARK 465 GLN A 347 REMARK 465 LYS A 348 REMARK 465 PRO A 349 REMARK 465 MET A 350 REMARK 465 ALA A 351 REMARK 465 LYS A 352 REMARK 465 GLY A 353 REMARK 465 PRO A 354 REMARK 465 ALA A 355 REMARK 465 LYS A 356 REMARK 465 ASN A 357 REMARK 465 SER A 358 REMARK 465 GLU A 359 REMARK 465 PRO A 360 REMARK 465 GLU A 361 REMARK 465 GLU A 362 REMARK 465 VAL A 363 REMARK 465 ILE A 364 REMARK 465 LEU A 365 REMARK 465 GLU A 366 REMARK 465 HIS A 367 REMARK 465 HIS A 368 REMARK 465 HIS A 369 REMARK 465 HIS A 370 REMARK 465 HIS A 371 REMARK 465 HIS A 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP A 87 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 87 CZ3 CH2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 HIS A 158 CG ND1 CD2 CE1 NE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ALA A 4 N CB REMARK 480 ASN A 82 CB CG OD1 ND2 REMARK 480 LEU A 90 CG CD1 CD2 REMARK 480 LYS A 146 CD CE NZ REMARK 480 LYS A 147 CG CD CE NZ REMARK 480 VAL A 153 CB CG1 CG2 REMARK 480 LYS A 154 CG CD CE NZ REMARK 480 GLN A 155 CG CD OE1 NE2 REMARK 480 GLU A 229 CB CG CD OE1 OE2 REMARK 480 LYS A 247 CD CE NZ REMARK 480 GLU A 314 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 16 NH1 - CZ - NH2 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG A 16 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 GLU A 33 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 HIS A 77 CA - CB - CG ANGL. DEV. = 10.2 DEGREES REMARK 500 TYR A 79 CB - CG - CD2 ANGL. DEV. = 3.9 DEGREES REMARK 500 TYR A 96 CB - CG - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 TYR A 123 CB - CG - CD2 ANGL. DEV. = 4.3 DEGREES REMARK 500 TYR A 129 CB - CG - CD2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ASP A 132 CB - CG - OD1 ANGL. DEV. = 6.4 DEGREES REMARK 500 LEU A 161 CA - CB - CG ANGL. DEV. = 14.1 DEGREES REMARK 500 ARG A 189 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 189 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 GLY A 220 C - N - CA ANGL. DEV. = 36.9 DEGREES REMARK 500 SER A 221 C - N - CA ANGL. DEV. = 19.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 17 -4.89 68.77 REMARK 500 ASN A 82 68.82 -158.72 REMARK 500 ALA A 85 101.09 -54.20 REMARK 500 PRO A 86 150.71 -36.42 REMARK 500 TRP A 87 -83.66 -45.51 REMARK 500 TYR A 123 -16.14 -145.51 REMARK 500 GLU A 151 -152.06 -114.26 REMARK 500 VAL A 152 -51.43 70.54 REMARK 500 HIS A 158 79.96 -109.47 REMARK 500 CYS A 250 90.69 -163.06 REMARK 500 VAL A 267 -53.91 -124.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 219 GLY A 220 -126.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602 DBREF 1N3L A 1 364 UNP P54577 SYYC_HUMAN 1 364 SEQADV 1N3L LEU A 365 UNP P54577 EXPRESSION TAG SEQADV 1N3L GLU A 366 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 367 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 368 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 369 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 370 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 371 UNP P54577 EXPRESSION TAG SEQADV 1N3L HIS A 372 UNP P54577 EXPRESSION TAG SEQRES 1 A 372 MET GLY ASP ALA PRO SER PRO GLU GLU LYS LEU HIS LEU SEQRES 2 A 372 ILE THR ARG ASN LEU GLN GLU VAL LEU GLY GLU GLU LYS SEQRES 3 A 372 LEU LYS GLU ILE LEU LYS GLU ARG GLU LEU LYS ILE TYR SEQRES 4 A 372 TRP GLY THR ALA THR THR GLY LYS PRO HIS VAL ALA TYR SEQRES 5 A 372 PHE VAL PRO MET SER LYS ILE ALA ASP PHE LEU LYS ALA SEQRES 6 A 372 GLY CYS GLU VAL THR ILE LEU PHE ALA ASP LEU HIS ALA SEQRES 7 A 372 TYR LEU ASP ASN MET LYS ALA PRO TRP GLU LEU LEU GLU SEQRES 8 A 372 LEU ARG VAL SER TYR TYR GLU ASN VAL ILE LYS ALA MET SEQRES 9 A 372 LEU GLU SER ILE GLY VAL PRO LEU GLU LYS LEU LYS PHE SEQRES 10 A 372 ILE LYS GLY THR ASP TYR GLN LEU SER LYS GLU TYR THR SEQRES 11 A 372 LEU ASP VAL TYR ARG LEU SER SER VAL VAL THR GLN HIS SEQRES 12 A 372 ASP SER LYS LYS ALA GLY ALA GLU VAL VAL LYS GLN VAL SEQRES 13 A 372 GLU HIS PRO LEU LEU SER GLY LEU LEU TYR PRO GLY LEU SEQRES 14 A 372 GLN ALA LEU ASP GLU GLU TYR LEU LYS VAL ASP ALA GLN SEQRES 15 A 372 PHE GLY GLY ILE ASP GLN ARG LYS ILE PHE THR PHE ALA SEQRES 16 A 372 GLU LYS TYR LEU PRO ALA LEU GLY TYR SER LYS ARG VAL SEQRES 17 A 372 HIS LEU MET ASN PRO MET VAL PRO GLY LEU THR GLY SER SEQRES 18 A 372 LYS MET SER SER SER GLU GLU GLU SER LYS ILE ASP LEU SEQRES 19 A 372 LEU ASP ARG LYS GLU ASP VAL LYS LYS LYS LEU LYS LYS SEQRES 20 A 372 ALA PHE CYS GLU PRO GLY ASN VAL GLU ASN ASN GLY VAL SEQRES 21 A 372 LEU SER PHE ILE LYS HIS VAL LEU PHE PRO LEU LYS SER SEQRES 22 A 372 GLU PHE VAL ILE LEU ARG ASP GLU LYS TRP GLY GLY ASN SEQRES 23 A 372 LYS THR TYR THR ALA TYR VAL ASP LEU GLU LYS ASP PHE SEQRES 24 A 372 ALA ALA GLU VAL VAL HIS PRO GLY ASP LEU LYS ASN SER SEQRES 25 A 372 VAL GLU VAL ALA LEU ASN LYS LEU LEU ASP PRO ILE ARG SEQRES 26 A 372 GLU LYS PHE ASN THR PRO ALA LEU LYS LYS LEU ALA SER SEQRES 27 A 372 ALA ALA TYR PRO ASP PRO SER LYS GLN LYS PRO MET ALA SEQRES 28 A 372 LYS GLY PRO ALA LYS ASN SER GLU PRO GLU GLU VAL ILE SEQRES 29 A 372 LEU GLU HIS HIS HIS HIS HIS HIS HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET GOL A 601 6 HET GOL A 602 6 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 8 HOH *316(H2 O) HELIX 1 1 SER A 6 ARG A 16 1 11 HELIX 2 2 GLY A 23 LYS A 32 1 10 HELIX 3 3 HIS A 49 ALA A 51 5 3 HELIX 4 4 TYR A 52 ALA A 65 1 14 HELIX 5 5 ALA A 74 ASP A 81 1 8 HELIX 6 6 PRO A 86 GLY A 109 1 24 HELIX 7 7 THR A 121 TYR A 123 5 3 HELIX 8 8 SER A 126 SER A 138 1 13 HELIX 9 9 THR A 141 GLY A 149 1 9 HELIX 10 10 LEU A 160 LEU A 177 1 18 HELIX 11 11 GLN A 188 LEU A 199 1 12 HELIX 12 12 PRO A 200 GLY A 203 5 4 HELIX 13 13 ARG A 237 LYS A 247 1 11 HELIX 14 14 ASN A 258 VAL A 267 1 10 HELIX 15 15 ASP A 280 GLY A 284 5 5 HELIX 16 16 ALA A 291 ALA A 301 1 11 HELIX 17 17 HIS A 305 PHE A 328 1 24 HELIX 18 18 THR A 330 TYR A 341 1 12 SHEET 1 A 6 GLU A 20 LEU A 22 0 SHEET 2 A 6 VAL A 208 ASN A 212 -1 O HIS A 209 N LEU A 22 SHEET 3 A 6 ALA A 181 GLY A 185 1 N GLY A 184 O ASN A 212 SHEET 4 A 6 LYS A 37 THR A 42 1 N TYR A 39 O PHE A 183 SHEET 5 A 6 GLU A 68 PHE A 73 1 O GLU A 68 N ILE A 38 SHEET 6 A 6 LEU A 115 LYS A 119 1 O ILE A 118 N PHE A 73 SHEET 1 B 2 PHE A 275 ILE A 277 0 SHEET 2 B 2 LYS A 287 TYR A 289 -1 O LYS A 287 N ILE A 277 CISPEP 1 ALA A 4 PRO A 5 0 3.22 SITE 1 AC1 10 HIS A 49 VAL A 50 ALA A 51 GLY A 217 SITE 2 AC1 10 LEU A 218 THR A 219 LYS A 231 HOH A2010 SITE 3 AC1 10 HOH A2033 HOH A2035 SITE 1 AC2 6 HIS A 305 PRO A 306 GLY A 307 ASP A 308 SITE 2 AC2 6 HOH A2199 HOH A2211 SITE 1 AC3 4 LYS A 26 ARG A 34 HOH A2066 HOH A2230 SITE 1 AC4 4 LYS A 282 TRP A 283 HOH A2040 HOH A2294 SITE 1 AC5 9 MET A 214 PRO A 216 SER A 262 LYS A 265 SITE 2 AC5 9 HIS A 266 HOH A2086 HOH A2101 HOH A2146 SITE 3 AC5 9 HOH A2223 SITE 1 AC6 3 HIS A 12 ARG A 16 SER A 273 CRYST1 74.595 162.392 35.603 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013406 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006158 0.000000 0.00000 SCALE3 0.000000 0.000000 0.028088 0.00000