data_1N89 # _entry.id 1N89 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1N89 pdb_00001n89 10.2210/pdb1n89/pdb RCSB RCSB017642 ? ? WWPDB D_1000017642 ? ? BMRB 4977 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 4977 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1N89 _pdbx_database_status.recvd_initial_deposition_date 2002-11-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pons, J.L.' 1 'de Lamotte, F.' 2 'Gautier, M.F.' 3 'Delsuc, M.A.' 4 # _citation.id primary _citation.title 'Refined solution structure of a liganded type 2 wheat nonspecific lipid transfer protein.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 278 _citation.page_first 14249 _citation.page_last 14256 _citation.year 2003 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12525478 _citation.pdbx_database_id_DOI 10.1074/jbc.M211683200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pons, J.L.' 1 ? primary 'de Lamotte, F.' 2 ? primary 'Gautier, M.F.' 3 ? primary 'Delsuc, M.A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'lipid transfer protein' 6985.943 1 ? ? ? ? 2 non-polymer syn '1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]' 483.553 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC _entity_poly.pdbx_seq_one_letter_code_can ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 CYS n 1 3 GLN n 1 4 ALA n 1 5 SER n 1 6 GLN n 1 7 LEU n 1 8 ALA n 1 9 VAL n 1 10 CYS n 1 11 ALA n 1 12 SER n 1 13 ALA n 1 14 ILE n 1 15 LEU n 1 16 SER n 1 17 GLY n 1 18 ALA n 1 19 LYS n 1 20 PRO n 1 21 SER n 1 22 GLY n 1 23 GLU n 1 24 CYS n 1 25 CYS n 1 26 GLY n 1 27 ASN n 1 28 LEU n 1 29 ARG n 1 30 ALA n 1 31 GLN n 1 32 GLN n 1 33 GLY n 1 34 CYS n 1 35 PHE n 1 36 CYS n 1 37 GLN n 1 38 TYR n 1 39 ALA n 1 40 LYS n 1 41 ASP n 1 42 PRO n 1 43 THR n 1 44 TYR n 1 45 GLY n 1 46 GLN n 1 47 TYR n 1 48 ILE n 1 49 ARG n 1 50 SER n 1 51 PRO n 1 52 HIS n 1 53 ALA n 1 54 ARG n 1 55 ASP n 1 56 THR n 1 57 LEU n 1 58 THR n 1 59 SER n 1 60 CYS n 1 61 GLY n 1 62 LEU n 1 63 ALA n 1 64 VAL n 1 65 PRO n 1 66 HIS n 1 67 CYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'durum wheat' _entity_src_gen.gene_src_genus Triticum _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species 'Triticum turgidum' _entity_src_gen.gene_src_strain 'subsp. durum' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Triticum turgidum subsp. durum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4567 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Pichia pastoris' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 4922 _entity_src_gen.host_org_genus Pichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain GS115 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NLT2G_WHEAT _struct_ref.pdbx_db_accession P82900 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC _struct_ref.pdbx_align_begin 30 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1N89 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 67 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P82900 _struct_ref_seq.db_align_beg 30 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 96 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 67 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PGM non-polymer . '1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]' LYSOPHOSPHATIDYLGLYCEROL 'C22 H44 O9 P -1' 483.553 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 DQF-COSY 2 1 1 '2D NOESY' 3 1 1 '2D TOCSY' 4 1 1 3D_15N-separated_NOESY 5 1 1 3D_15N-HSQC-TOCSY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 295.2 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 3.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2.8 mmol 15N-LTP with 1.5 eq PGM' _pdbx_nmr_sample_details.solvent_system '70 mmol Phosphate' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AMX _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1N89 _pdbx_nmr_refine.method 'annealing protocol' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1N89 _pdbx_nmr_ensemble.conformers_calculated_total_number 250 _pdbx_nmr_ensemble.conformers_submitted_total_number 9 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1N89 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal UXNMR ? collection ? 1 Gifa V4 'data analysis' ? 2 CNS ? refinement 'Brunger et al.' 3 # _exptl.entry_id 1N89 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1N89 _struct.title 'Solution structure of a liganded type 2 wheat non-specific Lipid Transfer Protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 1N89 _struct_keywords.pdbx_keywords 'LIPID TRANSPORT' _struct_keywords.text 'lipid transfer protein, LIPID TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 7 ? LEU A 15 ? LEU A 7 LEU A 15 1 ? 9 HELX_P HELX_P2 2 GLY A 22 ? GLN A 31 ? GLY A 22 GLN A 31 1 ? 10 HELX_P HELX_P3 3 CYS A 34 ? LYS A 40 ? CYS A 34 LYS A 40 1 ? 7 HELX_P HELX_P4 5 TYR A 44 ? ARG A 49 ? TYR A 44 ARG A 49 1 ? 6 HELX_P HELX_P5 4 PRO A 51 ? CYS A 60 ? PRO A 51 CYS A 60 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 34 SG ? ? A CYS 2 A CYS 34 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? A CYS 10 SG ? ? ? 1_555 A CYS 24 SG ? ? A CYS 10 A CYS 24 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf3 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 60 SG ? ? A CYS 25 A CYS 60 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 67 SG ? ? A CYS 36 A CYS 67 1_555 ? ? ? ? ? ? ? 2.030 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id PGM _struct_site.pdbx_auth_seq_id 68 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 10 _struct_site.details 'BINDING SITE FOR RESIDUE PGM A 68' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 LEU A 7 ? LEU A 7 . ? 1_555 ? 2 AC1 10 PHE A 35 ? PHE A 35 . ? 1_555 ? 3 AC1 10 TYR A 44 ? TYR A 44 . ? 1_555 ? 4 AC1 10 TYR A 47 ? TYR A 47 . ? 1_555 ? 5 AC1 10 ILE A 48 ? ILE A 48 . ? 1_555 ? 6 AC1 10 ARG A 54 ? ARG A 54 . ? 1_555 ? 7 AC1 10 LEU A 57 ? LEU A 57 . ? 1_555 ? 8 AC1 10 VAL A 64 ? VAL A 64 . ? 1_555 ? 9 AC1 10 PRO A 65 ? PRO A 65 . ? 1_555 ? 10 AC1 10 HIS A 66 ? HIS A 66 . ? 1_555 ? # _database_PDB_matrix.entry_id 1N89 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1N89 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _database_PDB_caveat.text 'PGM A 68 HAS WRONG CHIRALITY AT ATOM C8' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 CYS 34 34 34 CYS CYS A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 TYR 38 38 38 TYR TYR A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 TYR 47 47 47 TYR TYR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 HIS 52 52 52 HIS HIS A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 CYS 60 60 60 CYS CYS A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 CYS 67 67 67 CYS CYS A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id PGM _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 68 _pdbx_nonpoly_scheme.auth_seq_num 68 _pdbx_nonpoly_scheme.pdb_mon_id PGM _pdbx_nonpoly_scheme.auth_mon_id PGM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 860 ? 1 MORE -12 ? 1 'SSA (A^2)' 4460 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-03-18 2 'Structure model' 1 1 2008-04-28 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-02-05 5 'Structure model' 1 4 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 5 'Structure model' Advisory 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' database_PDB_caveat 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' pdbx_struct_assembly 6 4 'Structure model' pdbx_struct_assembly_prop 7 4 'Structure model' pdbx_struct_oper_list 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_database_remark 10 5 'Structure model' pdbx_database_status 11 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_database_status.status_code_cs' 2 4 'Structure model' '_pdbx_nmr_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_database_remark.text' 6 5 'Structure model' '_pdbx_database_status.status_code_nmr_data' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX Author determined the secondary structure. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 2 ? ? 59.94 93.88 2 1 SER A 5 ? ? -149.17 -36.00 3 1 LEU A 15 ? ? -73.70 -80.83 4 1 SER A 16 ? ? -60.22 -75.32 5 1 ALA A 18 ? ? -58.22 -76.94 6 1 PRO A 20 ? ? -53.71 -171.99 7 1 SER A 21 ? ? -174.39 140.99 8 1 GLN A 31 ? ? -81.93 -74.17 9 1 GLN A 32 ? ? 49.01 19.62 10 1 LEU A 62 ? ? -109.78 -60.03 11 1 PRO A 65 ? ? -57.19 -160.42 12 2 LEU A 15 ? ? -74.06 -79.50 13 2 ALA A 18 ? ? -57.63 -79.10 14 2 PRO A 20 ? ? -69.08 -174.69 15 2 SER A 21 ? ? -173.41 138.57 16 2 GLN A 31 ? ? -81.36 -72.66 17 2 GLN A 32 ? ? 47.30 20.68 18 2 PRO A 42 ? ? -82.09 38.16 19 2 ARG A 49 ? ? -80.45 31.06 20 2 PRO A 65 ? ? -77.74 31.71 21 3 GLN A 3 ? ? -156.64 -56.45 22 3 LEU A 15 ? ? -68.11 -77.85 23 3 SER A 16 ? ? -54.01 -70.20 24 3 ALA A 18 ? ? -58.60 -77.83 25 3 LYS A 19 ? ? -171.29 143.52 26 3 SER A 21 ? ? -166.32 -162.61 27 3 GLN A 31 ? ? -81.07 -71.86 28 3 GLN A 32 ? ? 48.28 20.03 29 3 TYR A 44 ? ? -89.71 -75.93 30 3 ARG A 49 ? ? -80.67 31.00 31 3 LEU A 62 ? ? -134.13 -92.32 32 3 PRO A 65 ? ? -81.83 32.28 33 4 CYS A 2 ? ? 59.99 99.35 34 4 GLN A 6 ? ? -86.86 48.45 35 4 LEU A 7 ? ? -151.99 -39.94 36 4 LEU A 15 ? ? -65.16 -74.38 37 4 ALA A 18 ? ? -61.75 -77.06 38 4 PRO A 20 ? ? -63.50 -167.03 39 4 SER A 21 ? ? -174.71 144.63 40 4 GLN A 31 ? ? -81.41 -71.60 41 4 GLN A 32 ? ? 48.76 19.25 42 4 ASP A 41 ? ? -57.44 109.10 43 4 LEU A 62 ? ? -123.48 -81.00 44 4 PRO A 65 ? ? -57.73 -160.57 45 5 LEU A 15 ? ? -74.61 -74.31 46 5 ALA A 18 ? ? -67.89 -77.62 47 5 PRO A 20 ? ? -55.44 -164.28 48 5 SER A 21 ? ? -172.41 136.92 49 5 GLN A 31 ? ? -81.09 -71.60 50 5 GLN A 32 ? ? 46.39 21.72 51 5 CYS A 34 ? ? -135.10 -37.08 52 5 LEU A 62 ? ? -113.87 -83.57 53 5 PRO A 65 ? ? -56.42 -160.21 54 6 CYS A 2 ? ? -106.26 -67.40 55 6 GLN A 3 ? ? -161.71 108.04 56 6 ALA A 13 ? ? -140.58 21.27 57 6 LYS A 19 ? ? -178.97 94.92 58 6 PRO A 20 ? ? -67.00 -167.26 59 6 SER A 21 ? ? -172.45 144.38 60 6 GLN A 31 ? ? -80.89 -71.56 61 6 GLN A 32 ? ? 48.66 19.80 62 6 CYS A 34 ? ? -135.27 -38.08 63 6 THR A 43 ? ? -170.75 -45.27 64 6 GLN A 46 ? ? -164.16 -40.72 65 6 LEU A 62 ? ? -116.99 -76.49 66 6 PRO A 65 ? ? -58.02 -160.66 67 7 CYS A 2 ? ? 61.37 104.44 68 7 LEU A 15 ? ? -68.11 -77.26 69 7 ALA A 18 ? ? -59.36 -78.70 70 7 PRO A 20 ? ? -53.62 -177.92 71 7 SER A 21 ? ? -174.76 135.64 72 7 GLN A 31 ? ? -81.41 -71.31 73 7 GLN A 32 ? ? 51.66 17.97 74 7 CYS A 34 ? ? -137.53 -34.81 75 7 LEU A 62 ? ? -119.04 -80.85 76 7 PRO A 65 ? ? -62.92 -163.26 77 8 CYS A 2 ? ? -157.42 -60.59 78 8 GLN A 3 ? ? -161.25 -42.88 79 8 LEU A 15 ? ? -69.85 -75.02 80 8 LYS A 19 ? ? 178.52 157.85 81 8 PRO A 20 ? ? -69.28 -179.20 82 8 GLN A 31 ? ? -81.08 -71.73 83 8 GLN A 32 ? ? 49.86 19.06 84 8 CYS A 34 ? ? -137.40 -34.58 85 8 ASP A 41 ? ? -57.94 109.27 86 8 THR A 43 ? ? -159.96 -45.39 87 8 TYR A 44 ? ? -90.10 -62.62 88 8 ARG A 49 ? ? -80.64 30.55 89 8 LEU A 62 ? ? -112.25 -78.84 90 8 PRO A 65 ? ? -56.69 -160.10 91 9 LEU A 15 ? ? -53.68 -81.54 92 9 SER A 16 ? ? -70.69 -79.64 93 9 ALA A 18 ? ? -59.95 -78.45 94 9 LYS A 19 ? ? -174.75 141.79 95 9 PRO A 20 ? ? -52.01 -179.86 96 9 SER A 21 ? ? -174.22 139.64 97 9 GLN A 31 ? ? -81.75 -71.90 98 9 GLN A 32 ? ? 47.01 20.66 99 9 TYR A 44 ? ? -105.75 -62.20 100 9 ARG A 49 ? ? -80.64 30.56 101 9 PRO A 65 ? ? -75.90 33.05 # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 3 C8 ? A PGM 68 ? 'WRONG HAND' . 2 4 C8 ? A PGM 68 ? 'WRONG HAND' . 3 5 C8 ? A PGM 68 ? 'WRONG HAND' . 4 6 C8 ? A PGM 68 ? 'WRONG HAND' . 5 9 C8 ? A PGM 68 ? 'WRONG HAND' . # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '1-MYRISTOYL-2-HYDROXY-SN-GLYCERO-3-[PHOSPHO-RAC-(1-GLYCEROL)]' _pdbx_entity_nonpoly.comp_id PGM #