HEADER TRANSFERASE 22-NOV-02 1N9A
TITLE FARNESYLTRANSFERASE COMPLEX WITH TETRAHYDROPYRIDINE INHIBITORS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: RESIDUE 55-369;
COMPND 5 SYNONYM: CAAX FARNESYLTRANSFERASE ALPHA SUBUNIT, RAS PROTEINS
COMPND 6 PRENYLTRANSFERASE ALPHA, FTASE-ALPHA;
COMPND 7 EC: 2.5.1.-;
COMPND 8 ENGINEERED: YES;
COMPND 9 MOL_ID: 2;
COMPND 10 MOLECULE: PROTEIN FARNESYLTRANSFERASE BETA SUBUNIT;
COMPND 11 CHAIN: B;
COMPND 12 FRAGMENT: RESIDUE 22-423;
COMPND 13 SYNONYM: CAAX FARNESYLTRANSFERASE BETA SUBUNIT, RAS PROTEINS
COMPND 14 PRENYLTRANSFERASE BETA, FTASE-BETA;
COMPND 15 EC: 2.5.1.-;
COMPND 16 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;
SOURCE 3 ORGANISM_COMMON: NORWAY RAT;
SOURCE 4 ORGANISM_TAXID: 10116;
SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SF9;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS;
SOURCE 10 MOL_ID: 2;
SOURCE 11 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS;
SOURCE 12 ORGANISM_COMMON: NORWAY RAT;
SOURCE 13 ORGANISM_TAXID: 10116;
SOURCE 14 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 15 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 17 EXPRESSION_SYSTEM_STRAIN: SF9
KEYWDS FARNESYLTRANSFERASE, TETRAHYDROPYRIDINE, PRENYLTRANSFERASE,
KEYWDS 2 TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR S.L.GWALTNEY II,S.J.O'CONNER,L.T.NELSON,G.M.SULLIVAN,H.IMADE,W.WANG,
AUTHOR 2 L.HASVOLD,Q.LI,J.COHEN,W.Z.GU
REVDAT 4 14-FEB-24 1N9A 1 REMARK SEQADV LINK
REVDAT 3 24-FEB-09 1N9A 1 VERSN
REVDAT 2 07-SEP-04 1N9A 1 JRNL
REVDAT 1 07-JAN-03 1N9A 0
JRNL AUTH S.L.GWALTNEY II,S.J.O'CONNOR,L.T.NELSON,G.M.SULLIVAN,
JRNL AUTH 2 H.IMADE,W.WANG,L.HASVOLD,Q.LI,J.COHEN,W.Z.GU,S.K.TAHIR,
JRNL AUTH 3 J.BAUCH,K.MARSH,S.C.NG,D.J.FROST,H.ZHANG,S.MUCHMORE,
JRNL AUTH 4 C.G.JAKOB,V.STOLL,C.HUTCHINS,S.H.ROSENBERG,H.L.SHAM
JRNL TITL ARYL TETRAHYDROPYRIDINE INHIBITORS OF FARNESYLTRANSFERASE:
JRNL TITL 2 BIOAVAILABLE ANALOGUES WITH IMPROVED CELLULAR POTENCY.
JRNL REF BIOORG.MED.CHEM.LETT. V. 13 1363 2003
JRNL REFN ISSN 0960-894X
JRNL PMID 12657283
JRNL DOI 10.1016/S0960-894X(03)00094-5
REMARK 2
REMARK 2 RESOLUTION. 3.20 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : X-PLOR 3.1
REMARK 3 AUTHORS : BRUNGER
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.12
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL
REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL
REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 NUMBER OF REFLECTIONS : 14561
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : NULL
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING SET) : 0.329
REMARK 3 FREE R VALUE : 0.375
REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 FREE R VALUE TEST SET COUNT : 1447
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : NULL
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL
REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL
REMARK 3 BIN R VALUE (WORKING SET) : NULL
REMARK 3 BIN FREE R VALUE : NULL
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5814
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 56
REMARK 3 SOLVENT ATOMS : 0
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.62
REMARK 3 ESD FROM SIGMAA (A) : 0.55
REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00
REMARK 3
REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL
REMARK 3 ESD FROM C-V SIGMAA (A) : NULL
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.014
REMARK 3 BOND ANGLES (DEGREES) : NULL
REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL
REMARK 3 IMPROPER ANGLES (DEGREES) : 0.990
REMARK 3
REMARK 3 ISOTROPIC THERMAL MODEL : NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA
REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL
REMARK 3
REMARK 3 NCS MODEL : NULL
REMARK 3
REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT
REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL
REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL
REMARK 3
REMARK 3 PARAMETER FILE 1 : NULL
REMARK 3 TOPOLOGY FILE 1 : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 1N9A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-NOV-02.
REMARK 100 THE DEPOSITION ID IS D_1000017678.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 01-JAN-01
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : NULL
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 17-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14561
REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200
REMARK 200 RESOLUTION RANGE LOW (A) : 40.120
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 75.8
REMARK 200 DATA REDUNDANCY : NULL
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.40
REMARK 200 COMPLETENESS FOR SHELL (%) : 53.6
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS
REMARK 200 SOFTWARE USED: X-PLOR
REMARK 200 STARTING MODEL: NULL
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 64.95
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.54
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: NULL
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+1/3
REMARK 290 3555 -X+Y,-X,Z+2/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+5/6
REMARK 290 6555 X-Y,X,Z+1/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.09067
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.18133
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.63600
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.72667
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.54533
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 8400 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 27220 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 HIS A 367
REMARK 465 SER A 368
REMARK 465 ARG A 369
REMARK 465 PRO B 22
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O ARG A 67 NZ LYS B 83 4665 1.91
REMARK 500 OG SER A 60 OE1 GLU A 257 6555 2.12
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION
REMARK 500 LYS A 366 CA LYS A 366 CB 0.137
REMARK 500 PHE B 423 C PHE B 423 O 0.133
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ASP A 74 CB - CG - OD1 ANGL. DEV. = -6.7 DEGREES
REMARK 500 ARG A 287 NE - CZ - NH1 ANGL. DEV. = -6.3 DEGREES
REMARK 500 LYS A 366 CA - C - O ANGL. DEV. = 30.8 DEGREES
REMARK 500 PRO B 117 C - N - CA ANGL. DEV. = 9.2 DEGREES
REMARK 500 PHE B 423 CA - C - O ANGL. DEV. = 49.3 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 VAL A 88 60.40 26.11
REMARK 500 ASN A 127 85.95 -157.92
REMARK 500 GLN A 145 71.81 49.80
REMARK 500 ALA A 197 1.68 -55.52
REMARK 500 LEU A 215 53.98 -102.32
REMARK 500 THR A 247 -68.12 -107.24
REMARK 500 LEU A 269 -45.02 -158.23
REMARK 500 GLN A 285 -9.22 -53.84
REMARK 500 ASP A 286 63.24 -105.57
REMARK 500 ARG A 287 -13.02 167.78
REMARK 500 LEU A 295 -70.61 -44.42
REMARK 500 HIS A 306 42.66 -149.98
REMARK 500 PRO A 309 0.28 -65.07
REMARK 500 GLN A 326 122.48 61.72
REMARK 500 ASP A 349 64.51 -161.98
REMARK 500 ARG A 352 66.80 -113.59
REMARK 500 SER B 60 0.02 -63.56
REMARK 500 GLN B 74 57.74 -57.86
REMARK 500 PRO B 119 128.65 -33.01
REMARK 500 GLN B 120 -6.47 -55.38
REMARK 500 PHE B 222 31.20 -95.23
REMARK 500 ARG B 266 -6.99 -59.77
REMARK 500 LYS B 294 -169.74 -112.23
REMARK 500 GLN B 318 33.90 -94.11
REMARK 500 ALA B 322 2.93 -62.65
REMARK 500 MET B 329 49.53 -77.33
REMARK 500 SER B 378 47.31 -175.40
REMARK 500 LEU B 382 66.57 -154.41
REMARK 500 PRO B 399 3.19 -62.13
REMARK 500 PRO B 421 81.69 -55.98
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: PLANAR GROUPS
REMARK 500
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS
REMARK 500 AN RMSD GREATER THAN THIS VALUE
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 M RES CSSEQI RMS TYPE
REMARK 500 TYR B 338 0.07 SIDE CHAIN
REMARK 500 TYR B 365 0.07 SIDE CHAIN
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN B 500 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 297 OD1
REMARK 620 2 ASP B 297 OD2 60.5
REMARK 620 3 CYS B 299 SG 97.6 100.3
REMARK 620 4 HIS B 362 NE2 85.8 132.5 117.6
REMARK 620 N 1 2 3
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 500
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HFP B 501
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FTI B 1
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 1N94 RELATED DB: PDB
REMARK 900 RELATED ID: 1N95 RELATED DB: PDB
DBREF 1N9A A 55 369 UNP Q04631 PFTA_RAT 55 369
DBREF 1N9A B 22 423 UNP Q02293 PFTB_RAT 22 423
SEQADV 1N9A THR A 156 UNP Q04631 ILE 156 CONFLICT
SEQRES 1 A 315 PHE LEU SER LEU ASP SER PRO THR TYR VAL LEU TYR ARG
SEQRES 2 A 315 ASP ARG ALA GLU TRP ALA ASP ILE ASP PRO VAL PRO GLN
SEQRES 3 A 315 ASN ASP GLY PRO SER PRO VAL VAL GLN ILE ILE TYR SER
SEQRES 4 A 315 GLU LYS PHE ARG ASP VAL TYR ASP TYR PHE ARG ALA VAL
SEQRES 5 A 315 LEU GLN ARG ASP GLU ARG SER GLU ARG ALA PHE LYS LEU
SEQRES 6 A 315 THR ARG ASP ALA ILE GLU LEU ASN ALA ALA ASN TYR THR
SEQRES 7 A 315 VAL TRP HIS PHE ARG ARG VAL LEU LEU ARG SER LEU GLN
SEQRES 8 A 315 LYS ASP LEU GLN GLU GLU MET ASN TYR ILE THR ALA ILE
SEQRES 9 A 315 ILE GLU GLU GLN PRO LYS ASN TYR GLN VAL TRP HIS HIS
SEQRES 10 A 315 ARG ARG VAL LEU VAL GLU TRP LEU LYS ASP PRO SER GLN
SEQRES 11 A 315 GLU LEU GLU PHE ILE ALA ASP ILE LEU ASN GLN ASP ALA
SEQRES 12 A 315 LYS ASN TYR HIS ALA TRP GLN HIS ARG GLN TRP VAL ILE
SEQRES 13 A 315 GLN GLU PHE ARG LEU TRP ASP ASN GLU LEU GLN TYR VAL
SEQRES 14 A 315 ASP GLN LEU LEU LYS GLU ASP VAL ARG ASN ASN SER VAL
SEQRES 15 A 315 TRP ASN GLN ARG HIS PHE VAL ILE SER ASN THR THR GLY
SEQRES 16 A 315 TYR SER ASP ARG ALA VAL LEU GLU ARG GLU VAL GLN TYR
SEQRES 17 A 315 THR LEU GLU MET ILE LYS LEU VAL PRO HIS ASN GLU SER
SEQRES 18 A 315 ALA TRP ASN TYR LEU LYS GLY ILE LEU GLN ASP ARG GLY
SEQRES 19 A 315 LEU SER ARG TYR PRO ASN LEU LEU ASN GLN LEU LEU ASP
SEQRES 20 A 315 LEU GLN PRO SER HIS SER SER PRO TYR LEU ILE ALA PHE
SEQRES 21 A 315 LEU VAL ASP ILE TYR GLU ASP MET LEU GLU ASN GLN CYS
SEQRES 22 A 315 ASP ASN LYS GLU ASP ILE LEU ASN LYS ALA LEU GLU LEU
SEQRES 23 A 315 CYS GLU ILE LEU ALA LYS GLU LYS ASP THR ILE ARG LYS
SEQRES 24 A 315 GLU TYR TRP ARG TYR ILE GLY ARG SER LEU GLN SER LYS
SEQRES 25 A 315 HIS SER ARG
SEQRES 1 B 402 PRO LEU TYR SER LEU ARG PRO GLU HIS ALA ARG GLU ARG
SEQRES 2 B 402 LEU GLN ASP ASP SER VAL GLU THR VAL THR SER ILE GLU
SEQRES 3 B 402 GLN ALA LYS VAL GLU GLU LYS ILE GLN GLU VAL PHE SER
SEQRES 4 B 402 SER TYR LYS PHE ASN HIS LEU VAL PRO ARG LEU VAL LEU
SEQRES 5 B 402 GLN ARG GLU LYS HIS PHE HIS TYR LEU LYS ARG GLY LEU
SEQRES 6 B 402 ARG GLN LEU THR ASP ALA TYR GLU CYS LEU ASP ALA SER
SEQRES 7 B 402 ARG PRO TRP LEU CYS TYR TRP ILE LEU HIS SER LEU GLU
SEQRES 8 B 402 LEU LEU ASP GLU PRO ILE PRO GLN ILE VAL ALA THR ASP
SEQRES 9 B 402 VAL CYS GLN PHE LEU GLU LEU CYS GLN SER PRO ASP GLY
SEQRES 10 B 402 GLY PHE GLY GLY GLY PRO GLY GLN TYR PRO HIS LEU ALA
SEQRES 11 B 402 PRO THR TYR ALA ALA VAL ASN ALA LEU CYS ILE ILE GLY
SEQRES 12 B 402 THR GLU GLU ALA TYR ASN VAL ILE ASN ARG GLU LYS LEU
SEQRES 13 B 402 LEU GLN TYR LEU TYR SER LEU LYS GLN PRO ASP GLY SER
SEQRES 14 B 402 PHE LEU MET HIS VAL GLY GLY GLU VAL ASP VAL ARG SER
SEQRES 15 B 402 ALA TYR CYS ALA ALA SER VAL ALA SER LEU THR ASN ILE
SEQRES 16 B 402 ILE THR PRO ASP LEU PHE GLU GLY THR ALA GLU TRP ILE
SEQRES 17 B 402 ALA ARG CYS GLN ASN TRP GLU GLY GLY ILE GLY GLY VAL
SEQRES 18 B 402 PRO GLY MET GLU ALA HIS GLY GLY TYR THR PHE CYS GLY
SEQRES 19 B 402 LEU ALA ALA LEU VAL ILE LEU LYS LYS GLU ARG SER LEU
SEQRES 20 B 402 ASN LEU LYS SER LEU LEU GLN TRP VAL THR SER ARG GLN
SEQRES 21 B 402 MET ARG PHE GLU GLY GLY PHE GLN GLY ARG CYS ASN LYS
SEQRES 22 B 402 LEU VAL ASP GLY CYS TYR SER PHE TRP GLN ALA GLY LEU
SEQRES 23 B 402 LEU PRO LEU LEU HIS ARG ALA LEU HIS ALA GLN GLY ASP
SEQRES 24 B 402 PRO ALA LEU SER MET SER HIS TRP MET PHE HIS GLN GLN
SEQRES 25 B 402 ALA LEU GLN GLU TYR ILE LEU MET CYS CYS GLN CYS PRO
SEQRES 26 B 402 ALA GLY GLY LEU LEU ASP LYS PRO GLY LYS SER ARG ASP
SEQRES 27 B 402 PHE TYR HIS THR CYS TYR CYS LEU SER GLY LEU SER ILE
SEQRES 28 B 402 ALA GLN HIS PHE GLY SER GLY ALA MET LEU HIS ASP VAL
SEQRES 29 B 402 VAL MET GLY VAL PRO GLU ASN VAL LEU GLN PRO THR HIS
SEQRES 30 B 402 PRO VAL TYR ASN ILE GLY PRO ASP LYS VAL ILE GLN ALA
SEQRES 31 B 402 THR THR HIS PHE LEU GLN LYS PRO VAL PRO GLY PHE
HET ZN B 500 1
HET HFP B 501 20
HET FTI B 1 35
HETNAM ZN ZINC ION
HETNAM HFP ALPHA-HYDROXYFARNESYLPHOSPHONIC ACID
HETNAM FTI 1-{2-[3-(4-CYANO-BENZYL)-3H-IMIDAZOL-4-YL]-ACETYL}-5-
HETNAM 2 FTI NAPHTHALEN-1-YL-1,2,3,6-TETRAHYDRO-PYRIDINE-4-
HETNAM 3 FTI CARBONITRILE
FORMUL 3 ZN ZN 2+
FORMUL 4 HFP C15 H33 O4 P
FORMUL 5 FTI C29 H23 N5 O
HELIX 1 1 SER A 93 ASP A 110 1 18
HELIX 2 2 SER A 113 ASN A 127 1 15
HELIX 3 3 ASN A 130 LEU A 144 1 15
HELIX 4 4 ASP A 147 GLN A 162 1 16
HELIX 5 5 ASN A 165 LYS A 180 1 16
HELIX 6 6 GLN A 184 ASP A 196 1 13
HELIX 7 7 ASN A 199 PHE A 213 1 15
HELIX 8 8 ASN A 218 ASP A 230 1 13
HELIX 9 9 ASN A 233 THR A 247 1 15
HELIX 10 10 ASP A 252 LYS A 268 1 17
HELIX 11 11 ASN A 273 GLN A 285 1 13
HELIX 12 12 GLY A 288 ARG A 291 5 4
HELIX 13 13 TYR A 292 HIS A 306 1 15
HELIX 14 14 SER A 308 ASN A 325 1 18
HELIX 15 15 ASN A 329 GLU A 347 1 19
HELIX 16 16 ASP A 349 ILE A 351 5 3
HELIX 17 17 ARG A 352 LYS A 366 1 15
HELIX 18 18 GLU B 29 ARG B 34 5 6
HELIX 19 19 THR B 42 HIS B 66 1 25
HELIX 20 20 GLN B 74 LEU B 86 1 13
HELIX 21 21 THR B 90 ASP B 97 5 8
HELIX 22 22 SER B 99 LEU B 114 1 16
HELIX 23 23 ILE B 121 GLN B 134 1 14
HELIX 24 24 HIS B 149 GLY B 164 1 16
HELIX 25 25 THR B 165 ILE B 172 1 8
HELIX 26 26 ASN B 173 LYS B 185 1 13
HELIX 27 27 ASP B 200 THR B 214 1 15
HELIX 28 28 GLY B 224 CYS B 232 1 9
HELIX 29 29 HIS B 248 LEU B 262 1 15
HELIX 30 30 LYS B 264 LEU B 268 5 5
HELIX 31 31 ASN B 269 ARG B 280 1 12
HELIX 32 32 CYS B 299 GLN B 304 1 6
HELIX 33 33 GLY B 306 GLN B 318 1 13
HELIX 34 34 HIS B 331 CYS B 343 1 13
HELIX 35 35 ASP B 359 HIS B 375 1 17
HELIX 36 36 VAL B 389 VAL B 393 5 5
HELIX 37 37 GLY B 404 GLN B 417 1 14
SHEET 1 A 2 GLN A 89 ILE A 90 0
SHEET 2 A 2 GLN B 88 LEU B 89 1 O LEU B 89 N GLN A 89
LINK OD1 ASP B 297 ZN ZN B 500 1555 1555 2.44
LINK OD2 ASP B 297 ZN ZN B 500 1555 1555 1.80
LINK SG CYS B 299 ZN ZN B 500 1555 1555 2.25
LINK NE2 HIS B 362 ZN ZN B 500 1555 1555 2.34
SITE 1 AC1 4 FTI B 1 ASP B 297 CYS B 299 HIS B 362
SITE 1 AC2 11 LYS A 164 TYR A 166 TYR A 200 FTI B 1
SITE 2 AC2 11 TYR B 205 HIS B 248 GLY B 250 TYR B 251
SITE 3 AC2 11 ARG B 291 TRP B 303 TYR B 361
SITE 1 AC3 7 TYR A 166 LEU B 96 TRP B 106 ASP B 359
SITE 2 AC3 7 TYR B 361 ZN B 500 HFP B 501
CRYST1 170.503 170.503 69.272 90.00 90.00 120.00 P 61 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.005865 0.003386 0.000000 0.00000
SCALE2 0.000000 0.006772 0.000000 0.00000
SCALE3 0.000000 0.000000 0.014436 0.00000