HEADER HYDROLASE(O-GLYCOSYL) 08-MAR-93 1NNB TITLE THREE-DIMENSIONAL STRUCTURE OF INFLUENZA A N9 NEURAMINIDASE AND ITS TITLE 2 COMPLEX WITH THE INHIBITOR 2-DEOXY 2,3-DEHYDRO-N-ACETYL NEURAMINIC TITLE 3 ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.18; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/TERN/AUSTRALIA/G70C/75 H11N9; SOURCE 5 CELL_LINE: S2 KEYWDS HYDROLASE(O-GLYCOSYL) EXPDTA X-RAY DIFFRACTION AUTHOR P.BOSSART-WHITAKER,M.CARSON,Y.S.BABU,C.D.SMITH,W.G.LAVER,G.M.AIR REVDAT 7 23-OCT-24 1NNB 1 HETSYN REVDAT 6 29-JUL-20 1NNB 1 REMARK LINK SITE REVDAT 5 22-APR-20 1NNB 1 COMPND REVDAT 4 29-NOV-17 1NNB 1 HELIX REVDAT 3 13-JUL-11 1NNB 1 VERSN REVDAT 2 24-FEB-09 1NNB 1 VERSN REVDAT 1 30-APR-94 1NNB 0 JRNL AUTH P.BOSSART-WHITAKER,M.CARSON,Y.S.BABU,C.D.SMITH,W.G.LAVER, JRNL AUTH 2 G.M.AIR JRNL TITL THREE-DIMENSIONAL STRUCTURE OF INFLUENZA A N9 NEURAMINIDASE JRNL TITL 2 AND ITS COMPLEX WITH THE INHIBITOR 2-DEOXY JRNL TITL 3 2,3-DEHYDRO-N-ACETYL NEURAMINIC ACID. JRNL REF J.MOL.BIOL. V. 232 1069 1993 JRNL REFN ISSN 0022-2836 JRNL PMID 8371267 JRNL DOI 10.1006/JMBI.1993.1461 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.J.BOSSART-WHITAKER REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF INFLUENZA REMARK 1 TITL 2 A(SLASH)TERN(SLASH)AUSTRALIA(SLASH)G70C(SLASH)75 N9 REMARK 1 TITL 3 NEURAMINIDASE AND ITS COMPLEX WITH THE INHIBITOR REMARK 1 TITL 4 2-DEOXY-2,3-DEHYDRO N-ACETYL NEURAMINIC ACID REMARK 1 REF THESIS 1992 REMARK 1 REFN ISSN 0049-3848 REMARK 1 REFERENCE 2 REMARK 1 AUTH J.M.NUSS,G.M.AIR REMARK 1 TITL TRANSFER OF THE HEMAGGLUTININ ACTIVITY OF INFLUENZA VIRUS REMARK 1 TITL 2 NEURAMINIDASE SUBTYPE N9 INTO AN N2 BACKGROUND REMARK 1 REF VIROLOGY V. 183 496 1991 REMARK 1 REFN ISSN 0042-6822 REMARK 1 REFERENCE 3 REMARK 1 AUTH W.R.TULIP,J.N.VARGHESE,A.T.BAKER,A.VAN DONKELAAR,W.G.LAVER, REMARK 1 AUTH 2 R.G.WEBSTER,P.M.COLMAN REMARK 1 TITL REFINED ATOMIC STRUCTURES OF N9 SUBTYPE INFLUENZA VIRUS REMARK 1 TITL 2 NEURAMINIDASE AND ESCAPE MUTANTS REMARK 1 REF J.MOL.BIOL. V. 221 487 1991 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 4 REMARK 1 AUTH A.T.BAKER,J.N.VARGHESE,W.G.LAVER,G.M.AIR,P.M.COLMAN REMARK 1 TITL THREE-DIMENSIONAL STRUCTURE OF NEURAMINIDASE OF SUBTYPE N9 REMARK 1 TITL 2 FROM AN AVIAN INFLUENZA VIRUS REMARK 1 REF PROTEINS V. 2 111 1987 REMARK 1 REFN ISSN 0887-3585 REMARK 1 REFERENCE 5 REMARK 1 AUTH G.M.AIR,L.R.RITCHIE,W.G.LAVER,P.M.COLMAN REMARK 1 TITL GENE AND PROTEIN SEQUENCE OF AN INFLUENZA NEURAMINIDASE WITH REMARK 1 TITL 2 HEMAGGLUTININ ACTIVITY REMARK 1 REF VIROLOGY V. 145 117 1985 REMARK 1 REFN ISSN 0042-6822 REMARK 1 REFERENCE 6 REMARK 1 AUTH W.G.LAVER,P.M.COLMAN,R.G.WEBSTER,V.S.HINSHAW REMARK 1 TITL INFLUENZA VIRUS NEURAMINIDASE WITH HEMAGGLUTININ ACTIVITY REMARK 1 REF VIROLOGY V. 137 314 1984 REMARK 1 REFN ISSN 0042-6822 REMARK 1 REFERENCE 7 REMARK 1 TITL MEMORANDUM: A REVISION OF THE SYSTEM OF NOMENCLATURE FOR REMARK 1 TITL 2 INFLUENZA VIRUSES REMARK 1 REF BULL.WHO. V. 58 585 1980 REMARK 1 REFN ISSN 0366-4996 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 10389 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3056 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.013 REMARK 3 BOND ANGLES (DEGREES) : 1.600 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 RESIDUE 336 IS GLY. IT WAS REFINED AS ASN AND THE AUTHORS REMARK 3 NOTED THAT THE SIDE CHAIN OF THIS RESIDUE NEVER DISPLAYED REMARK 3 DENSITY (SEE FIGURE 3A OF THE PAPER CITED ON *JRNL* RECORDS REMARK 3 ABOVE). THE AUTHORS BELIEVE THAT CHANGING IT TO GLY WILL REMARK 3 HAVE A NEGLIGIBLE EFFECT ON THE REST OF THE STRUCTURE. REMARK 4 REMARK 4 1NNB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175339. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: X-PLOR REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 25555 X+1/2,Y+1/2,Z+1/2 REMARK 290 26555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 27555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 28555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 29555 Z+1/2,X+1/2,Y+1/2 REMARK 290 30555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 31555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 32555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 33555 Y+1/2,Z+1/2,X+1/2 REMARK 290 34555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 35555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 36555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 37555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 38555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 39555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 40555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 41555 X+1/2,Z+1/2,-Y+1/2 REMARK 290 42555 -X+1/2,Z+1/2,Y+1/2 REMARK 290 43555 -X+1/2,-Z+1/2,-Y+1/2 REMARK 290 44555 X+1/2,-Z+1/2,Y+1/2 REMARK 290 45555 Z+1/2,Y+1/2,-X+1/2 REMARK 290 46555 Z+1/2,-Y+1/2,X+1/2 REMARK 290 47555 -Z+1/2,Y+1/2,X+1/2 REMARK 290 48555 -Z+1/2,-Y+1/2,-X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 25 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 25 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY3 25 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY1 26 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 26 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY3 26 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY1 27 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 27 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY3 27 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY1 28 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 28 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY3 28 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY1 29 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY2 29 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 29 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY1 30 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY2 30 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 30 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY1 31 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY2 31 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 31 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY1 32 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY2 32 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 32 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY1 33 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY2 33 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY3 33 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 34 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY2 34 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY3 34 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 35 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY2 35 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY3 35 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 36 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY2 36 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY3 36 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 37 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY2 37 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 37 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY1 38 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY2 38 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 38 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY1 39 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY2 39 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 39 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY1 40 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY2 40 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY3 40 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY1 41 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 41 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY3 41 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY1 42 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 42 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY3 42 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY1 43 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 43 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY3 43 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY1 44 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY2 44 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY3 44 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY1 45 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY2 45 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY3 45 -1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 46 0.000000 0.000000 1.000000 91.89000 REMARK 290 SMTRY2 46 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY3 46 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 47 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY2 47 0.000000 1.000000 0.000000 91.89000 REMARK 290 SMTRY3 47 1.000000 0.000000 0.000000 91.89000 REMARK 290 SMTRY1 48 0.000000 0.000000 -1.000000 91.89000 REMARK 290 SMTRY2 48 0.000000 -1.000000 0.000000 91.89000 REMARK 290 SMTRY3 48 -1.000000 0.000000 0.000000 91.89000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 15680 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 97 -173.44 -172.77 REMARK 500 LYS A 103 134.16 -178.12 REMARK 500 ASP A 112 25.81 -143.48 REMARK 500 THR A 149 15.45 -69.59 REMARK 500 ASN A 202 36.59 -163.10 REMARK 500 ARG A 211 16.98 49.37 REMARK 500 ILE A 224 71.06 34.80 REMARK 500 THR A 227 -156.68 -119.79 REMARK 500 LYS A 266 153.55 177.40 REMARK 500 CYS A 293 -154.54 -114.77 REMARK 500 GLN A 298 -43.79 -139.24 REMARK 500 THR A 325 22.21 -141.56 REMARK 500 ASP A 326 -166.61 -100.99 REMARK 500 ASN A 327 118.98 -173.54 REMARK 500 ASP A 357 44.87 -143.16 REMARK 500 ASN A 360 51.87 -100.06 REMARK 500 GLN A 393 158.56 178.93 REMARK 500 SER A 404 -140.10 -121.33 REMARK 500 SER A 442 -163.39 -126.30 REMARK 500 PHE A 454 69.65 -109.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 142 0.07 SIDE CHAIN REMARK 500 ARG A 153 0.12 SIDE CHAIN REMARK 500 ARG A 212 0.07 SIDE CHAIN REMARK 500 TYR A 257 0.06 SIDE CHAIN REMARK 500 TYR A 258 0.07 SIDE CHAIN REMARK 500 ARG A 302 0.10 SIDE CHAIN REMARK 500 ARG A 365 0.07 SIDE CHAIN REMARK 500 ARG A 421 0.09 SIDE CHAIN REMARK 500 TYR A 425 0.12 SIDE CHAIN REMARK 500 TYR A 468 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL A 323 10.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 471 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 295 O REMARK 620 2 GLY A 299 O 82.8 REMARK 620 3 ASP A 326 OD2 90.3 94.6 REMARK 620 4 ASN A 348 O 106.8 162.1 100.3 REMARK 620 N 1 2 3 REMARK 700 REMARK 700 SHEET REMARK 700 STRAND 1 OF SHEET S3 (LEU 225 - HIS 235) IS NOT REALLY PART REMARK 700 OF THE SHEET BY H-BONDING CRITERIA BECAUSE IT IS IN AN REMARK 700 EXTENDED CONFORMATION. OTHERS HAVE BEEN INCLUDED IN THE REMARK 700 SHEET MOSTLY FOR THE SAKE OF SYMMETRY; I.E., THE STRUCTURE REMARK 700 THEN CONSISTS OF SIX SHEETS OF FOUR ANTIPARALLEL STRANDS REMARK 700 EACH. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: SUB REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL REMARK 800 REMARK 800 SITE_IDENTIFIER: CAL REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: NULL DBREF 1NNB A 84 470 UNP P03472 NRAM_IATRA 84 470 SEQRES 1 A 387 ASP PHE ASN ASN LEU THR LYS GLY LEU CYS THR ILE ASN SEQRES 2 A 387 SER TRP HIS ILE TYR GLY LYS ASP ASN ALA VAL ARG ILE SEQRES 3 A 387 GLY GLU ASP SER ASP VAL LEU VAL THR ARG GLU PRO TYR SEQRES 4 A 387 VAL SER CYS ASP PRO ASP GLU CYS ARG PHE TYR ALA LEU SEQRES 5 A 387 SER GLN GLY THR THR ILE ARG GLY LYS HIS SER ASN GLY SEQRES 6 A 387 THR ILE HIS ASP ARG SER GLN TYR ARG ALA LEU ILE SER SEQRES 7 A 387 TRP PRO LEU SER SER PRO PRO THR VAL TYR ASN SER ARG SEQRES 8 A 387 VAL GLU CYS ILE GLY TRP SER SER THR SER CYS HIS ASP SEQRES 9 A 387 GLY LYS THR ARG MET SER ILE CYS ILE SER GLY PRO ASN SEQRES 10 A 387 ASN ASN ALA SER ALA VAL ILE TRP TYR ASN ARG ARG PRO SEQRES 11 A 387 VAL THR GLU ILE ASN THR TRP ALA ARG ASN ILE LEU ARG SEQRES 12 A 387 THR GLN GLU SER GLU CYS VAL CYS HIS ASN GLY VAL CYS SEQRES 13 A 387 PRO VAL VAL PHE THR ASP GLY SER ALA THR GLY PRO ALA SEQRES 14 A 387 GLU THR ARG ILE TYR TYR PHE LYS GLU GLY LYS ILE LEU SEQRES 15 A 387 LYS TRP GLU PRO LEU ALA GLY THR ALA LYS HIS ILE GLU SEQRES 16 A 387 GLU CYS SER CYS TYR GLY GLU ARG ALA GLU ILE THR CYS SEQRES 17 A 387 THR CYS ARG ASP ASN TRP GLN GLY SER ASN ARG PRO VAL SEQRES 18 A 387 ILE ARG ILE ASP PRO VAL ALA MET THR HIS THR SER GLN SEQRES 19 A 387 TYR ILE CYS SER PRO VAL LEU THR ASP ASN PRO ARG PRO SEQRES 20 A 387 ASN ASP PRO THR VAL GLY LYS CYS ASN ASP PRO TYR PRO SEQRES 21 A 387 GLY ASN ASN ASN ASN GLY VAL LYS GLY PHE SER TYR LEU SEQRES 22 A 387 ASP GLY VAL ASN THR TRP LEU GLY ARG THR ILE SER ILE SEQRES 23 A 387 ALA SER ARG SER GLY TYR GLU MET LEU LYS VAL PRO ASN SEQRES 24 A 387 ALA LEU THR ASP ASP LYS SER LYS PRO THR GLN GLY GLN SEQRES 25 A 387 THR ILE VAL LEU ASN THR ASP TRP SER GLY TYR SER GLY SEQRES 26 A 387 SER PHE MET ASP TYR TRP ALA GLU GLY GLU CYS TYR ARG SEQRES 27 A 387 ALA CYS PHE TYR VAL GLU LEU ILE ARG GLY ARG PRO LYS SEQRES 28 A 387 GLU ASP LYS VAL TRP TRP THR SER ASN SER ILE VAL SER SEQRES 29 A 387 MET CYS SER SER THR GLU PHE LEU GLY GLN TRP ASP TRP SEQRES 30 A 387 PRO ASP GLY ALA LYS ILE GLU TYR PHE LEU HET CA A 471 1 HET DAN A 500 33 HETNAM CA CALCIUM ION HETNAM DAN 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID HETSYN DAN NEU5AC2EN FORMUL 2 CA CA 2+ FORMUL 3 DAN C11 H17 N O8 HELIX 1 1 ALA A 106 GLY A 110 1 5 SHEET 1 S1 4 VAL A 115 CYS A 125 0 SHEET 2 S1 4 CYS A 130 THR A 139 -1 SHEET 3 S1 4 ALA A 158 PRO A 163 -1 SHEET 4 S1 4 ARG A 174 ILE A 178 -1 SHEET 1 S2 4 SER A 181 HIS A 186 0 SHEET 2 S2 4 ARG A 191 SER A 197 -1 SHEET 3 S2 4 SER A 204 TYR A 209 -1 SHEET 4 S2 4 ARG A 212 ASN A 218 -1 SHEET 1 S3 4 LEU A 225 HIS A 235 0 SHEET 2 S3 4 VAL A 238 GLY A 246 -1 SHEET 3 S3 4 ALA A 252 LYS A 260 -1 SHEET 4 S3 4 LYS A 263 PRO A 269 -1 SHEET 1 S4 4 GLU A 278 GLU A 285 0 SHEET 2 S4 4 GLU A 288 CYS A 293 -1 SHEET 3 S4 4 PRO A 303 ASP A 308 -1 SHEET 4 S4 4 THR A 313 TYR A 318 -1 SHEET 1 S5 4 SER A 354 TYR A 355 0 SHEET 2 S5 4 TRP A 362 ARG A 365 -1 SHEET 3 S5 4 SER A 373 LYS A 379 -1 SHEET 4 S5 4 GLN A 393 ASP A 402 -1 SHEET 1 S6 4 SER A 407 PHE A 410 0 SHEET 2 S6 4 CYS A 423 GLY A 431 -1 SHEET 3 S6 4 THR A 441 SER A 451 -1 SHEET 4 S6 4 SER A 97 LYS A 103 -1 SSBOND 1 CYS A 93 CYS A 419 1555 1555 2.01 SSBOND 2 CYS A 125 CYS A 130 1555 1555 2.03 SSBOND 3 CYS A 177 CYS A 195 1555 1555 2.04 SSBOND 4 CYS A 185 CYS A 232 1555 1555 2.03 SSBOND 5 CYS A 234 CYS A 239 1555 1555 2.02 SSBOND 6 CYS A 280 CYS A 293 1555 1555 2.03 SSBOND 7 CYS A 282 CYS A 291 1555 1555 2.02 SSBOND 8 CYS A 320 CYS A 338 1555 1555 2.03 SSBOND 9 CYS A 423 CYS A 449 1555 1555 2.03 LINK O ASP A 295 CA CA A 471 1555 1555 2.65 LINK O GLY A 299 CA CA A 471 1555 1555 2.67 LINK OD2 ASP A 326 CA CA A 471 1555 1555 2.79 LINK O ASN A 348 CA CA A 471 1555 1555 2.30 CISPEP 1 ASN A 327 PRO A 328 0 6.26 CISPEP 2 ARG A 432 PRO A 433 0 -0.06 SITE 1 SUB 18 ARG A 119 GLU A 120 ASP A 152 ARG A 153 SITE 2 SUB 18 TRP A 180 SER A 181 ILE A 224 ARG A 226 SITE 3 SUB 18 GLU A 229 HIS A 276 GLU A 278 GLU A 279 SITE 4 SUB 18 ARG A 294 ASN A 296 GLY A 349 ARG A 372 SITE 5 SUB 18 TYR A 406 GLU A 427 SITE 1 CAL 4 ASP A 295 GLY A 299 ASP A 326 GLY A 349 CRYST1 183.780 183.780 183.780 90.00 90.00 90.00 I 4 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005441 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005441 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005441 0.00000