data_1NNI # _entry.id 1NNI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1NNI RCSB RCSB018034 WWPDB D_1000018034 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC1167 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1NNI _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2003-01-13 _pdbx_database_status.status_code REL _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cuff, M.E.' 1 'Kim, Y.' 2 'Maj, L.' 3 'Collart, F.' 4 'Joachimiak, A.' 5 'Midwest Center for Structural Genomics (MCSG)' 6 # _citation.id primary _citation.title 'Azobenzene Reductase from Bacillus subtilis' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2003 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Cuff, M.E.' 1 primary 'Kim, Y.' 2 primary 'Maj, L.' 3 primary 'Collart, F.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 1NNI _cell.length_a 112.720 _cell.length_b 112.720 _cell.length_c 90.011 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1NNI _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.cell_setting hexagonal _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 180 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein yhda' 19207.242 1 1.7.1.6 ? ? apc1167 2 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 3 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'azobenzene reductase, Azoreductase' # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.1.7.1.6 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)N(MSE)LVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSP EYHSG(MSE)SGALKNALDFLSSEQFKYKPVALLAVAGGGKGGINALNN(MSE)RTV(MSE)RGVYANVIPKQLVLDPVH IDVENATVAENIKESIKELVEELS(MSE)FAKAGNPGV ; _entity_poly.pdbx_seq_one_letter_code_can ;MNMLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPEYHSGMSG ALKNALDFLSSEQFKYKPVALLAVAGGGKGGINALNNMRTVMRGVYANVIPKQLVLDPVHIDVENATVAENIKESIKELV EELSMFAKAGNPGV ; _entity_poly.pdbx_strand_id 1 _entity_poly.pdbx_target_identifier APC1167 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ASN n 1 3 MSE n 1 4 LEU n 1 5 VAL n 1 6 ILE n 1 7 ASN n 1 8 GLY n 1 9 THR n 1 10 PRO n 1 11 ARG n 1 12 LYS n 1 13 HIS n 1 14 GLY n 1 15 ARG n 1 16 THR n 1 17 ARG n 1 18 ILE n 1 19 ALA n 1 20 ALA n 1 21 SER n 1 22 TYR n 1 23 ILE n 1 24 ALA n 1 25 ALA n 1 26 LEU n 1 27 TYR n 1 28 HIS n 1 29 THR n 1 30 ASP n 1 31 LEU n 1 32 ILE n 1 33 ASP n 1 34 LEU n 1 35 SER n 1 36 GLU n 1 37 PHE n 1 38 VAL n 1 39 LEU n 1 40 PRO n 1 41 VAL n 1 42 PHE n 1 43 ASN n 1 44 GLY n 1 45 GLU n 1 46 ALA n 1 47 GLU n 1 48 GLN n 1 49 SER n 1 50 GLU n 1 51 LEU n 1 52 LEU n 1 53 LYS n 1 54 VAL n 1 55 GLN n 1 56 GLU n 1 57 LEU n 1 58 LYS n 1 59 GLN n 1 60 ARG n 1 61 VAL n 1 62 THR n 1 63 LYS n 1 64 ALA n 1 65 ASP n 1 66 ALA n 1 67 ILE n 1 68 VAL n 1 69 LEU n 1 70 LEU n 1 71 SER n 1 72 PRO n 1 73 GLU n 1 74 TYR n 1 75 HIS n 1 76 SER n 1 77 GLY n 1 78 MSE n 1 79 SER n 1 80 GLY n 1 81 ALA n 1 82 LEU n 1 83 LYS n 1 84 ASN n 1 85 ALA n 1 86 LEU n 1 87 ASP n 1 88 PHE n 1 89 LEU n 1 90 SER n 1 91 SER n 1 92 GLU n 1 93 GLN n 1 94 PHE n 1 95 LYS n 1 96 TYR n 1 97 LYS n 1 98 PRO n 1 99 VAL n 1 100 ALA n 1 101 LEU n 1 102 LEU n 1 103 ALA n 1 104 VAL n 1 105 ALA n 1 106 GLY n 1 107 GLY n 1 108 GLY n 1 109 LYS n 1 110 GLY n 1 111 GLY n 1 112 ILE n 1 113 ASN n 1 114 ALA n 1 115 LEU n 1 116 ASN n 1 117 ASN n 1 118 MSE n 1 119 ARG n 1 120 THR n 1 121 VAL n 1 122 MSE n 1 123 ARG n 1 124 GLY n 1 125 VAL n 1 126 TYR n 1 127 ALA n 1 128 ASN n 1 129 VAL n 1 130 ILE n 1 131 PRO n 1 132 LYS n 1 133 GLN n 1 134 LEU n 1 135 VAL n 1 136 LEU n 1 137 ASP n 1 138 PRO n 1 139 VAL n 1 140 HIS n 1 141 ILE n 1 142 ASP n 1 143 VAL n 1 144 GLU n 1 145 ASN n 1 146 ALA n 1 147 THR n 1 148 VAL n 1 149 ALA n 1 150 GLU n 1 151 ASN n 1 152 ILE n 1 153 LYS n 1 154 GLU n 1 155 SER n 1 156 ILE n 1 157 LYS n 1 158 GLU n 1 159 LEU n 1 160 VAL n 1 161 GLU n 1 162 GLU n 1 163 LEU n 1 164 SER n 1 165 MSE n 1 166 PHE n 1 167 ALA n 1 168 LYS n 1 169 ALA n 1 170 GLY n 1 171 ASN n 1 172 PRO n 1 173 GLY n 1 174 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Bacillus _entity_src_gen.pdbx_gene_src_gene yhda _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1423 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code O07529_BACSU _struct_ref.pdbx_db_accession O07529 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MNMLVINGTPRKHGRTRIAASYIAALYHTDLIDLSEFVLPVFNGEAEQSELLKVQELKQRVTKADAIVLLSPEYHSGMSG ALKNALDFLSSEQFKYKPVALLAVAGGGKGGINALNNMRTVMRGVYANVIPKQLVLDPVHIDVENATVAENIKESIKELV EELSMFAKAGNPGV ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1NNI _struct_ref_seq.pdbx_strand_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 174 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O07529 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1NNI MSE 1 1 ? UNP O07529 MET 1 'CLONING ARTIFACT' 1 1 1 1NNI MSE 1 3 ? UNP O07529 MET 3 'CLONING ARTIFACT' 3 2 1 1NNI MSE 1 78 ? UNP O07529 MET 78 'CLONING ARTIFACT' 78 3 1 1NNI MSE 1 118 ? UNP O07529 MET 118 'CLONING ARTIFACT' 118 4 1 1NNI MSE 1 122 ? UNP O07529 MET 122 'CLONING ARTIFACT' 122 5 1 1NNI MSE 1 165 ? UNP O07529 MET 165 'CLONING ARTIFACT' 165 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1NNI _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 68.9 _exptl_crystal.density_Matthews 3.99 _exptl_crystal.density_meas ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'trisodium citrate, sodium HEPES, sucrose, pH 7.5-8.5, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 150 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type SBC-2 _diffrn_detector.pdbx_collection_date 2002-08-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'sagitally focused Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97940 1.0 2 0.97926 1.0 3 0.95372 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list '0.97940, 0.97926, 0.95372' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? # _reflns.entry_id 1NNI _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 50.0 _reflns.limit_h_max 40 _reflns.limit_h_min 0 _reflns.limit_k_max 23 _reflns.limit_k_min 0 _reflns.limit_l_max 36 _reflns.limit_l_min -36 _reflns.number_all 22141 _reflns.observed_criterion_sigma_F 1.5 _reflns.observed_criterion_F_max 2577691.04 _reflns.observed_criterion_F_min 3.489000 _reflns.B_iso_Wilson_estimate 38.1 _reflns.observed_criterion_sigma_I 0 _reflns.number_obs 19743 _reflns.percent_possible_obs 89.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1NNI _refine.ls_number_reflns_all 22142 _refine.ls_number_reflns_obs 17370 _refine.ls_percent_reflns_obs 78.4 _refine.ls_d_res_high 2.50 _refine.ls_d_res_low 48.81 _refine.B_iso_min 29.36 _refine.B_iso_max 100.88 _refine.B_iso_mean 52.95 _refine.occupancy_min 1.00 _refine.occupancy_max 1.00 _refine.aniso_B[1][1] -10.64 _refine.aniso_B[2][2] -10.64 _refine.aniso_B[3][3] 21.27 _refine.aniso_B[1][2] -0.89 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_param_bsol 50.1134 _refine.solvent_model_param_ksol 0.330555 _refine.solvent_model_details 'CNS bulk solvent model used' _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.238 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_number_reflns_R_free 1593 _refine.ls_percent_reflns_R_free 9.2 _refine.details ? _refine.pdbx_ls_sigma_F 1.5 _refine.pdbx_ls_sigma_I ? _refine.ls_R_factor_all 0.238 _refine.ls_R_factor_obs 0.223 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_isotropic_thermal_model restrained _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1NNI _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs 2.50 _refine_analyze.Luzzati_coordinate_error_obs 0.33 _refine_analyze.Luzzati_sigma_a_obs 0.47 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.51 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1309 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 31 _refine_hist.number_atoms_solvent 138 _refine_hist.number_atoms_total 1478 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 48.81 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 . ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.6 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_deg 22.0 . ? ? 'X-RAY DIFFRACTION' ? x_torsion_impr_deg 0.88 . ? ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.R_factor_all 2.50 2.61 2753 1165 1060 42.3 0.329 0.356 0.035 105 9.0 . . 'X-RAY DIFFRACTION' . 2.61 2.75 2766 1567 1448 56.6 0.299 0.328 0.030 119 7.6 . . 'X-RAY DIFFRACTION' . 2.75 2.92 2774 1998 1819 72.0 0.289 0.327 0.024 179 9.0 . . 'X-RAY DIFFRACTION' . 2.92 3.15 2772 2332 2102 84.1 0.271 0.284 0.019 230 9.9 . . 'X-RAY DIFFRACTION' . 3.15 3.47 2780 2506 2227 90.1 0.236 0.238 0.014 279 11.1 . . 'X-RAY DIFFRACTION' . 3.47 3.97 2765 2594 2387 93.8 0.195 0.243 0.017 207 8.0 . . 'X-RAY DIFFRACTION' . 3.97 5.00 2774 2651 2386 95.6 0.171 0.177 0.011 265 10.0 . . 'X-RAY DIFFRACTION' . 5.00 48.81 2779 2557 2348 92.0 0.226 0.247 0.017 209 8.2 . . 'X-RAY DIFFRACTION' . # _struct.entry_id 1NNI _struct.title 'Azobenzene Reductase from Bacillus subtilis' _struct.pdbx_descriptor 'hypothetical protein yhda (E.C.1.7.1.6)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1NNI _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text ;azobenzene reductase, azoreductase, structural genomics, flavoproteins, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, OXIDOREDUCTASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ;likely a dimer related by the crystallographic two fold axis: 1-y, 1-x, 3/2-z ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? HIS A 28 ? GLY 1 14 HIS 1 28 1 ? 15 HELX_P HELX_P2 2 GLU A 45 ? GLU A 50 ? GLU 1 45 GLU 1 50 1 ? 6 HELX_P HELX_P3 3 LEU A 51 ? ALA A 64 ? LEU 1 51 ALA 1 64 1 ? 14 HELX_P HELX_P4 4 SER A 79 ? LEU A 89 ? SER 1 79 LEU 1 89 1 ? 11 HELX_P HELX_P5 5 SER A 90 ? LYS A 95 ? SER 1 90 LYS 1 95 1 ? 6 HELX_P HELX_P6 6 GLY A 111 ? VAL A 125 ? GLY 1 111 VAL 1 125 1 ? 15 HELX_P HELX_P7 7 ASP A 137 ? VAL A 139 ? ASP 1 137 VAL 1 139 5 ? 3 HELX_P HELX_P8 8 VAL A 143 ? ALA A 146 ? VAL 1 143 ALA 1 146 5 ? 4 HELX_P HELX_P9 9 ALA A 149 ? GLY A 170 ? ALA 1 149 GLY 1 170 1 ? 22 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A ASN 2 N ? ? 1 MSE 1 1 ASN 2 1_555 ? ? ? ? ? ? ? 1.328 ? covale2 covale ? ? A ASN 2 C ? ? ? 1_555 A MSE 3 N ? ? 1 ASN 2 1 MSE 3 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A MSE 3 C ? ? ? 1_555 A LEU 4 N ? ? 1 MSE 3 1 LEU 4 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A GLY 77 C ? ? ? 1_555 A MSE 78 N ? ? 1 GLY 77 1 MSE 78 1_555 ? ? ? ? ? ? ? 1.324 ? covale5 covale ? ? A MSE 78 C ? ? ? 1_555 A SER 79 N ? ? 1 MSE 78 1 SER 79 1_555 ? ? ? ? ? ? ? 1.324 ? covale6 covale ? ? A ASN 117 C ? ? ? 1_555 A MSE 118 N ? ? 1 ASN 117 1 MSE 118 1_555 ? ? ? ? ? ? ? 1.321 ? covale7 covale ? ? A MSE 118 C ? ? ? 1_555 A ARG 119 N ? ? 1 MSE 118 1 ARG 119 1_555 ? ? ? ? ? ? ? 1.316 ? covale8 covale ? ? A VAL 121 C ? ? ? 1_555 A MSE 122 N ? ? 1 VAL 121 1 MSE 122 1_555 ? ? ? ? ? ? ? 1.321 ? covale9 covale ? ? A MSE 122 C ? ? ? 1_555 A ARG 123 N ? ? 1 MSE 122 1 ARG 123 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? A SER 164 C ? ? ? 1_555 A MSE 165 N ? ? 1 SER 164 1 MSE 165 1_555 ? ? ? ? ? ? ? 1.323 ? covale11 covale ? ? A MSE 165 C ? ? ? 1_555 A PHE 166 N ? ? 1 MSE 165 1 PHE 166 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 30 ? ASP A 33 ? ASP 1 30 ASP 1 33 A 2 MSE A 3 ? ASN A 7 ? MSE 1 3 ASN 1 7 A 3 ALA A 66 ? PRO A 72 ? ALA 1 66 PRO 1 72 A 4 PRO A 98 ? VAL A 104 ? PRO 1 98 VAL 1 104 A 5 ASN A 128 ? VAL A 129 ? ASN 1 128 VAL 1 129 B 1 ASP A 30 ? ASP A 33 ? ASP 1 30 ASP 1 33 B 2 MSE A 3 ? ASN A 7 ? MSE 1 3 ASN 1 7 B 3 ALA A 66 ? PRO A 72 ? ALA 1 66 PRO 1 72 B 4 PRO A 98 ? VAL A 104 ? PRO 1 98 VAL 1 104 B 5 LEU A 134 ? LEU A 136 ? LEU 1 134 LEU 1 136 C 1 ILE A 141 ? ASP A 142 ? ILE 1 141 ASP 1 142 C 2 THR A 147 ? VAL A 148 ? THR 1 147 VAL 1 148 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 32 ? O ILE 1 32 N VAL A 5 ? N VAL 1 5 A 2 3 N LEU A 4 ? N LEU 1 4 O VAL A 68 ? O VAL 1 68 A 3 4 N LEU A 69 ? N LEU 1 69 O ALA A 100 ? O ALA 1 100 A 4 5 N VAL A 99 ? N VAL 1 99 O ASN A 128 ? O ASN 1 128 B 1 2 O ILE A 32 ? O ILE 1 32 N VAL A 5 ? N VAL 1 5 B 2 3 N LEU A 4 ? N LEU 1 4 O VAL A 68 ? O VAL 1 68 B 3 4 N LEU A 69 ? N LEU 1 69 O ALA A 100 ? O ALA 1 100 B 4 5 N ALA A 103 ? N ALA 1 103 O LEU A 136 ? O LEU 1 136 C 1 2 N ASP A 142 ? N ASP 1 142 O THR A 147 ? O THR 1 147 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 16 _struct_site.details 'BINDING SITE FOR RESIDUE FMN 1 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 THR A 9 ? THR 1 9 . ? 1_555 ? 2 AC1 16 ARG A 11 ? ARG 1 11 . ? 1_555 ? 3 AC1 16 GLY A 14 ? GLY 1 14 . ? 1_555 ? 4 AC1 16 ARG A 15 ? ARG 1 15 . ? 1_555 ? 5 AC1 16 THR A 16 ? THR 1 16 . ? 1_555 ? 6 AC1 16 PRO A 72 ? PRO 1 72 . ? 1_555 ? 7 AC1 16 GLU A 73 ? GLU 1 73 . ? 1_555 ? 8 AC1 16 TYR A 74 ? TYR 1 74 . ? 1_555 ? 9 AC1 16 HIS A 75 ? HIS 1 75 . ? 1_555 ? 10 AC1 16 SER A 76 ? SER 1 76 . ? 1_555 ? 11 AC1 16 ASP A 87 ? ASP 1 87 . ? 10_664 ? 12 AC1 16 VAL A 104 ? VAL 1 104 . ? 1_555 ? 13 AC1 16 ALA A 105 ? ALA 1 105 . ? 1_555 ? 14 AC1 16 GLY A 106 ? GLY 1 106 . ? 1_555 ? 15 AC1 16 GLY A 110 ? GLY 1 110 . ? 1_555 ? 16 AC1 16 HOH C . ? HOH 1 219 . ? 1_555 ? # _atom_sites.entry_id 1NNI _atom_sites.fract_transf_matrix[1][1] 0.008872 _atom_sites.fract_transf_matrix[1][2] 0.005122 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010244 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011110 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE 1 . n A 1 2 ASN 2 2 2 ASN ASN 1 . n A 1 3 MSE 3 3 3 MSE MSE 1 . n A 1 4 LEU 4 4 4 LEU LEU 1 . n A 1 5 VAL 5 5 5 VAL VAL 1 . n A 1 6 ILE 6 6 6 ILE ILE 1 . n A 1 7 ASN 7 7 7 ASN ASN 1 . n A 1 8 GLY 8 8 8 GLY GLY 1 . n A 1 9 THR 9 9 9 THR THR 1 . n A 1 10 PRO 10 10 10 PRO PRO 1 . n A 1 11 ARG 11 11 11 ARG ARG 1 . n A 1 12 LYS 12 12 12 LYS LYS 1 . n A 1 13 HIS 13 13 13 HIS HIS 1 . n A 1 14 GLY 14 14 14 GLY GLY 1 . n A 1 15 ARG 15 15 15 ARG ARG 1 . n A 1 16 THR 16 16 16 THR THR 1 . n A 1 17 ARG 17 17 17 ARG ARG 1 . n A 1 18 ILE 18 18 18 ILE ILE 1 . n A 1 19 ALA 19 19 19 ALA ALA 1 . n A 1 20 ALA 20 20 20 ALA ALA 1 . n A 1 21 SER 21 21 21 SER SER 1 . n A 1 22 TYR 22 22 22 TYR TYR 1 . n A 1 23 ILE 23 23 23 ILE ILE 1 . n A 1 24 ALA 24 24 24 ALA ALA 1 . n A 1 25 ALA 25 25 25 ALA ALA 1 . n A 1 26 LEU 26 26 26 LEU LEU 1 . n A 1 27 TYR 27 27 27 TYR TYR 1 . n A 1 28 HIS 28 28 28 HIS HIS 1 . n A 1 29 THR 29 29 29 THR THR 1 . n A 1 30 ASP 30 30 30 ASP ASP 1 . n A 1 31 LEU 31 31 31 LEU LEU 1 . n A 1 32 ILE 32 32 32 ILE ILE 1 . n A 1 33 ASP 33 33 33 ASP ASP 1 . n A 1 34 LEU 34 34 34 LEU LEU 1 . n A 1 35 SER 35 35 35 SER SER 1 . n A 1 36 GLU 36 36 36 GLU GLU 1 . n A 1 37 PHE 37 37 37 PHE PHE 1 . n A 1 38 VAL 38 38 38 VAL VAL 1 . n A 1 39 LEU 39 39 39 LEU LEU 1 . n A 1 40 PRO 40 40 40 PRO PRO 1 . n A 1 41 VAL 41 41 41 VAL VAL 1 . n A 1 42 PHE 42 42 42 PHE PHE 1 . n A 1 43 ASN 43 43 43 ASN ASN 1 . n A 1 44 GLY 44 44 44 GLY GLY 1 . n A 1 45 GLU 45 45 45 GLU GLU 1 . n A 1 46 ALA 46 46 46 ALA ALA 1 . n A 1 47 GLU 47 47 47 GLU GLU 1 . n A 1 48 GLN 48 48 48 GLN GLN 1 . n A 1 49 SER 49 49 49 SER SER 1 . n A 1 50 GLU 50 50 50 GLU GLU 1 . n A 1 51 LEU 51 51 51 LEU LEU 1 . n A 1 52 LEU 52 52 52 LEU LEU 1 . n A 1 53 LYS 53 53 53 LYS LYS 1 . n A 1 54 VAL 54 54 54 VAL VAL 1 . n A 1 55 GLN 55 55 55 GLN GLN 1 . n A 1 56 GLU 56 56 56 GLU GLU 1 . n A 1 57 LEU 57 57 57 LEU LEU 1 . n A 1 58 LYS 58 58 58 LYS LYS 1 . n A 1 59 GLN 59 59 59 GLN GLN 1 . n A 1 60 ARG 60 60 60 ARG ARG 1 . n A 1 61 VAL 61 61 61 VAL VAL 1 . n A 1 62 THR 62 62 62 THR THR 1 . n A 1 63 LYS 63 63 63 LYS LYS 1 . n A 1 64 ALA 64 64 64 ALA ALA 1 . n A 1 65 ASP 65 65 65 ASP ASP 1 . n A 1 66 ALA 66 66 66 ALA ALA 1 . n A 1 67 ILE 67 67 67 ILE ILE 1 . n A 1 68 VAL 68 68 68 VAL VAL 1 . n A 1 69 LEU 69 69 69 LEU LEU 1 . n A 1 70 LEU 70 70 70 LEU LEU 1 . n A 1 71 SER 71 71 71 SER SER 1 . n A 1 72 PRO 72 72 72 PRO PRO 1 . n A 1 73 GLU 73 73 73 GLU GLU 1 . n A 1 74 TYR 74 74 74 TYR TYR 1 . n A 1 75 HIS 75 75 75 HIS HIS 1 . n A 1 76 SER 76 76 76 SER SER 1 . n A 1 77 GLY 77 77 77 GLY GLY 1 . n A 1 78 MSE 78 78 78 MSE MSE 1 . n A 1 79 SER 79 79 79 SER SER 1 . n A 1 80 GLY 80 80 80 GLY GLY 1 . n A 1 81 ALA 81 81 81 ALA ALA 1 . n A 1 82 LEU 82 82 82 LEU LEU 1 . n A 1 83 LYS 83 83 83 LYS LYS 1 . n A 1 84 ASN 84 84 84 ASN ASN 1 . n A 1 85 ALA 85 85 85 ALA ALA 1 . n A 1 86 LEU 86 86 86 LEU LEU 1 . n A 1 87 ASP 87 87 87 ASP ASP 1 . n A 1 88 PHE 88 88 88 PHE PHE 1 . n A 1 89 LEU 89 89 89 LEU LEU 1 . n A 1 90 SER 90 90 90 SER SER 1 . n A 1 91 SER 91 91 91 SER SER 1 . n A 1 92 GLU 92 92 92 GLU GLU 1 . n A 1 93 GLN 93 93 93 GLN GLN 1 . n A 1 94 PHE 94 94 94 PHE PHE 1 . n A 1 95 LYS 95 95 95 LYS LYS 1 . n A 1 96 TYR 96 96 96 TYR TYR 1 . n A 1 97 LYS 97 97 97 LYS LYS 1 . n A 1 98 PRO 98 98 98 PRO PRO 1 . n A 1 99 VAL 99 99 99 VAL VAL 1 . n A 1 100 ALA 100 100 100 ALA ALA 1 . n A 1 101 LEU 101 101 101 LEU LEU 1 . n A 1 102 LEU 102 102 102 LEU LEU 1 . n A 1 103 ALA 103 103 103 ALA ALA 1 . n A 1 104 VAL 104 104 104 VAL VAL 1 . n A 1 105 ALA 105 105 105 ALA ALA 1 . n A 1 106 GLY 106 106 106 GLY GLY 1 . n A 1 107 GLY 107 107 107 GLY GLY 1 . n A 1 108 GLY 108 108 108 GLY GLY 1 . n A 1 109 LYS 109 109 109 LYS LYS 1 . n A 1 110 GLY 110 110 110 GLY GLY 1 . n A 1 111 GLY 111 111 111 GLY GLY 1 . n A 1 112 ILE 112 112 112 ILE ILE 1 . n A 1 113 ASN 113 113 113 ASN ASN 1 . n A 1 114 ALA 114 114 114 ALA ALA 1 . n A 1 115 LEU 115 115 115 LEU LEU 1 . n A 1 116 ASN 116 116 116 ASN ASN 1 . n A 1 117 ASN 117 117 117 ASN ASN 1 . n A 1 118 MSE 118 118 118 MSE MSE 1 . n A 1 119 ARG 119 119 119 ARG ARG 1 . n A 1 120 THR 120 120 120 THR THR 1 . n A 1 121 VAL 121 121 121 VAL VAL 1 . n A 1 122 MSE 122 122 122 MSE MSE 1 . n A 1 123 ARG 123 123 123 ARG ARG 1 . n A 1 124 GLY 124 124 124 GLY GLY 1 . n A 1 125 VAL 125 125 125 VAL VAL 1 . n A 1 126 TYR 126 126 126 TYR TYR 1 . n A 1 127 ALA 127 127 127 ALA ALA 1 . n A 1 128 ASN 128 128 128 ASN ASN 1 . n A 1 129 VAL 129 129 129 VAL VAL 1 . n A 1 130 ILE 130 130 130 ILE ILE 1 . n A 1 131 PRO 131 131 131 PRO PRO 1 . n A 1 132 LYS 132 132 132 LYS LYS 1 . n A 1 133 GLN 133 133 133 GLN GLN 1 . n A 1 134 LEU 134 134 134 LEU LEU 1 . n A 1 135 VAL 135 135 135 VAL VAL 1 . n A 1 136 LEU 136 136 136 LEU LEU 1 . n A 1 137 ASP 137 137 137 ASP ASP 1 . n A 1 138 PRO 138 138 138 PRO PRO 1 . n A 1 139 VAL 139 139 139 VAL VAL 1 . n A 1 140 HIS 140 140 140 HIS HIS 1 . n A 1 141 ILE 141 141 141 ILE ILE 1 . n A 1 142 ASP 142 142 142 ASP ASP 1 . n A 1 143 VAL 143 143 143 VAL VAL 1 . n A 1 144 GLU 144 144 144 GLU GLU 1 . n A 1 145 ASN 145 145 145 ASN ASN 1 . n A 1 146 ALA 146 146 146 ALA ALA 1 . n A 1 147 THR 147 147 147 THR THR 1 . n A 1 148 VAL 148 148 148 VAL VAL 1 . n A 1 149 ALA 149 149 149 ALA ALA 1 . n A 1 150 GLU 150 150 150 GLU GLU 1 . n A 1 151 ASN 151 151 151 ASN ASN 1 . n A 1 152 ILE 152 152 152 ILE ILE 1 . n A 1 153 LYS 153 153 153 LYS LYS 1 . n A 1 154 GLU 154 154 154 GLU GLU 1 . n A 1 155 SER 155 155 155 SER SER 1 . n A 1 156 ILE 156 156 156 ILE ILE 1 . n A 1 157 LYS 157 157 157 LYS LYS 1 . n A 1 158 GLU 158 158 158 GLU GLU 1 . n A 1 159 LEU 159 159 159 LEU LEU 1 . n A 1 160 VAL 160 160 160 VAL VAL 1 . n A 1 161 GLU 161 161 161 GLU GLU 1 . n A 1 162 GLU 162 162 162 GLU GLU 1 . n A 1 163 LEU 163 163 163 LEU LEU 1 . n A 1 164 SER 164 164 164 SER SER 1 . n A 1 165 MSE 165 165 165 MSE MSE 1 . n A 1 166 PHE 166 166 166 PHE PHE 1 . n A 1 167 ALA 167 167 167 ALA ALA 1 . n A 1 168 LYS 168 168 168 LYS LYS 1 . n A 1 169 ALA 169 169 169 ALA ALA 1 . n A 1 170 GLY 170 170 170 GLY GLY 1 . n A 1 171 ASN 171 171 171 ASN ASN 1 . n A 1 172 PRO 172 172 ? ? ? 1 . n A 1 173 GLY 173 173 ? ? ? 1 . n A 1 174 VAL 174 174 ? ? ? 1 . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 1 MSE 1 ? MET SELENOMETHIONINE 2 A MSE 3 1 MSE 3 ? MET SELENOMETHIONINE 3 A MSE 78 1 MSE 78 ? MET SELENOMETHIONINE 4 A MSE 118 1 MSE 118 ? MET SELENOMETHIONINE 5 A MSE 122 1 MSE 122 ? MET SELENOMETHIONINE 6 A MSE 165 1 MSE 165 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 10_664 -y+1,-x+1,-z-1/3 0.5000000000 -0.8660254038 0.0000000000 56.3600000000 -0.8660254038 -0.5000000000 0.0000000000 97.6183835146 0.0000000000 0.0000000000 -1.0000000000 -30.0036666667 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id 1 _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 279 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id C _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-29 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.location _software.classification _software.language _software.citation_id _software.pdbx_ordinal CNS 1.1 1998 package 'Axel T. Brunger' axel.brunger@yale.edu . refinement Fortran ? 1 d*TREK . ? ? ? ? ? 'data reduction' ? ? 2 HKL-2000 . ? ? ? ? ? 'data reduction' ? ? 3 SCALEPACK . ? ? ? ? ? 'data scaling' ? ? 4 CNS . ? ? ? ? ? phasing ? ? 5 SOLVE . ? ? ? ? ? phasing ? ? 6 RESOLVE . ? ? ? ? ? phasing ? ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 1 _pdbx_validate_close_contact.auth_comp_id_1 LEU _pdbx_validate_close_contact.auth_seq_id_1 51 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 NE2 _pdbx_validate_close_contact.auth_asym_id_2 1 _pdbx_validate_close_contact.auth_comp_id_2 GLN _pdbx_validate_close_contact.auth_seq_id_2 55 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O 1 HOH 247 ? ? 1_555 O 1 HOH 247 ? ? 4_665 2.02 2 1 O 1 HOH 248 ? ? 1_555 O 1 HOH 248 ? ? 11_555 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU 1 34 ? ? -66.69 9.62 2 1 PHE 1 42 ? ? -46.36 151.00 3 1 ASN 1 43 ? ? -151.19 10.58 4 1 LEU 1 52 ? ? -12.56 -71.28 5 1 LYS 1 53 ? ? -42.65 -75.96 6 1 ALA 1 64 ? ? -49.72 150.30 7 1 ASN 1 128 ? ? -118.91 79.08 8 1 ALA 1 146 ? ? 37.40 53.92 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 1 PRO 172 ? A PRO 172 2 1 Y 1 1 GLY 173 ? A GLY 173 3 1 Y 1 1 VAL 174 ? A VAL 174 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN MONONUCLEOTIDE' FMN 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN 1 200 200 FMN FMN 1 . C 3 HOH 1 201 1 HOH HOH 1 . C 3 HOH 2 202 2 HOH HOH 1 . C 3 HOH 3 203 3 HOH HOH 1 . C 3 HOH 4 204 4 HOH HOH 1 . C 3 HOH 5 205 5 HOH HOH 1 . C 3 HOH 6 206 6 HOH HOH 1 . C 3 HOH 7 207 7 HOH HOH 1 . C 3 HOH 8 208 8 HOH HOH 1 . C 3 HOH 9 209 9 HOH HOH 1 . C 3 HOH 10 210 10 HOH HOH 1 . C 3 HOH 11 211 11 HOH HOH 1 . C 3 HOH 12 212 12 HOH HOH 1 . C 3 HOH 13 213 13 HOH HOH 1 . C 3 HOH 14 214 14 HOH HOH 1 . C 3 HOH 15 215 15 HOH HOH 1 . C 3 HOH 16 216 16 HOH HOH 1 . C 3 HOH 17 217 17 HOH HOH 1 . C 3 HOH 18 218 18 HOH HOH 1 . C 3 HOH 19 219 19 HOH HOH 1 . C 3 HOH 20 220 20 HOH HOH 1 . C 3 HOH 21 221 21 HOH HOH 1 . C 3 HOH 22 222 22 HOH HOH 1 . C 3 HOH 23 223 23 HOH HOH 1 . C 3 HOH 24 224 24 HOH HOH 1 . C 3 HOH 25 225 25 HOH HOH 1 . C 3 HOH 26 226 26 HOH HOH 1 . C 3 HOH 27 227 27 HOH HOH 1 . C 3 HOH 28 228 28 HOH HOH 1 . C 3 HOH 29 229 29 HOH HOH 1 . C 3 HOH 30 230 30 HOH HOH 1 . C 3 HOH 31 231 31 HOH HOH 1 . C 3 HOH 32 232 32 HOH HOH 1 . C 3 HOH 33 233 33 HOH HOH 1 . C 3 HOH 34 234 34 HOH HOH 1 . C 3 HOH 35 235 35 HOH HOH 1 . C 3 HOH 36 236 36 HOH HOH 1 . C 3 HOH 37 237 37 HOH HOH 1 . C 3 HOH 38 238 38 HOH HOH 1 . C 3 HOH 39 239 39 HOH HOH 1 . C 3 HOH 40 240 40 HOH HOH 1 . C 3 HOH 41 241 41 HOH HOH 1 . C 3 HOH 42 242 42 HOH HOH 1 . C 3 HOH 43 243 43 HOH HOH 1 . C 3 HOH 44 244 44 HOH HOH 1 . C 3 HOH 45 245 45 HOH HOH 1 . C 3 HOH 46 246 46 HOH HOH 1 . C 3 HOH 47 247 47 HOH HOH 1 . C 3 HOH 48 248 48 HOH HOH 1 . C 3 HOH 49 249 49 HOH HOH 1 . C 3 HOH 50 250 50 HOH HOH 1 . C 3 HOH 51 251 51 HOH HOH 1 . C 3 HOH 52 252 52 HOH HOH 1 . C 3 HOH 53 253 53 HOH HOH 1 . C 3 HOH 54 254 54 HOH HOH 1 . C 3 HOH 55 255 55 HOH HOH 1 . C 3 HOH 56 256 56 HOH HOH 1 . C 3 HOH 57 257 57 HOH HOH 1 . C 3 HOH 58 258 58 HOH HOH 1 . C 3 HOH 59 259 59 HOH HOH 1 . C 3 HOH 60 260 60 HOH HOH 1 . C 3 HOH 61 261 61 HOH HOH 1 . C 3 HOH 62 262 62 HOH HOH 1 . C 3 HOH 63 263 63 HOH HOH 1 . C 3 HOH 64 264 64 HOH HOH 1 . C 3 HOH 65 265 65 HOH HOH 1 . C 3 HOH 66 266 66 HOH HOH 1 . C 3 HOH 67 267 67 HOH HOH 1 . C 3 HOH 68 268 68 HOH HOH 1 . C 3 HOH 69 269 69 HOH HOH 1 . C 3 HOH 70 270 70 HOH HOH 1 . C 3 HOH 71 271 71 HOH HOH 1 . C 3 HOH 72 272 72 HOH HOH 1 . C 3 HOH 73 273 73 HOH HOH 1 . C 3 HOH 74 274 74 HOH HOH 1 . C 3 HOH 75 275 75 HOH HOH 1 . C 3 HOH 76 276 76 HOH HOH 1 . C 3 HOH 77 277 77 HOH HOH 1 . C 3 HOH 78 278 78 HOH HOH 1 . C 3 HOH 79 279 79 HOH HOH 1 . C 3 HOH 80 280 80 HOH HOH 1 . C 3 HOH 81 281 81 HOH HOH 1 . C 3 HOH 82 282 82 HOH HOH 1 . C 3 HOH 83 283 83 HOH HOH 1 . C 3 HOH 84 284 84 HOH HOH 1 . C 3 HOH 85 285 85 HOH HOH 1 . C 3 HOH 86 286 86 HOH HOH 1 . C 3 HOH 87 287 87 HOH HOH 1 . C 3 HOH 88 288 88 HOH HOH 1 . C 3 HOH 89 289 89 HOH HOH 1 . C 3 HOH 90 290 90 HOH HOH 1 . C 3 HOH 91 291 91 HOH HOH 1 . C 3 HOH 92 292 92 HOH HOH 1 . C 3 HOH 93 293 93 HOH HOH 1 . C 3 HOH 94 294 94 HOH HOH 1 . C 3 HOH 95 295 95 HOH HOH 1 . C 3 HOH 96 296 96 HOH HOH 1 . C 3 HOH 97 297 97 HOH HOH 1 . C 3 HOH 98 298 98 HOH HOH 1 . C 3 HOH 99 299 99 HOH HOH 1 . C 3 HOH 100 300 100 HOH HOH 1 . C 3 HOH 101 301 101 HOH HOH 1 . C 3 HOH 102 302 102 HOH HOH 1 . C 3 HOH 103 303 103 HOH HOH 1 . C 3 HOH 104 304 104 HOH HOH 1 . C 3 HOH 105 305 105 HOH HOH 1 . C 3 HOH 106 306 106 HOH HOH 1 . C 3 HOH 107 307 107 HOH HOH 1 . C 3 HOH 108 308 108 HOH HOH 1 . C 3 HOH 109 309 109 HOH HOH 1 . C 3 HOH 110 310 110 HOH HOH 1 . C 3 HOH 111 311 111 HOH HOH 1 . C 3 HOH 112 312 112 HOH HOH 1 . C 3 HOH 113 313 113 HOH HOH 1 . C 3 HOH 114 314 114 HOH HOH 1 . C 3 HOH 115 315 115 HOH HOH 1 . C 3 HOH 116 316 116 HOH HOH 1 . C 3 HOH 117 317 117 HOH HOH 1 . C 3 HOH 118 318 118 HOH HOH 1 . C 3 HOH 119 319 119 HOH HOH 1 . C 3 HOH 120 320 120 HOH HOH 1 . C 3 HOH 121 321 121 HOH HOH 1 . C 3 HOH 122 322 122 HOH HOH 1 . C 3 HOH 123 323 123 HOH HOH 1 . C 3 HOH 124 324 124 HOH HOH 1 . C 3 HOH 125 325 125 HOH HOH 1 . C 3 HOH 126 326 126 HOH HOH 1 . C 3 HOH 127 327 127 HOH HOH 1 . C 3 HOH 128 328 128 HOH HOH 1 . C 3 HOH 129 329 129 HOH HOH 1 . C 3 HOH 130 330 130 HOH HOH 1 . C 3 HOH 131 331 131 HOH HOH 1 . C 3 HOH 132 332 132 HOH HOH 1 . C 3 HOH 133 333 133 HOH HOH 1 . C 3 HOH 134 334 134 HOH HOH 1 . C 3 HOH 135 335 135 HOH HOH 1 . C 3 HOH 136 336 136 HOH HOH 1 . C 3 HOH 137 337 137 HOH HOH 1 . C 3 HOH 138 338 138 HOH HOH 1 . #