HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 14-JAN-03 1NNW TITLE HYPOTHETICAL PROTEIN FROM PYROCOCCUS FURIOSUS PFU-1218608 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PYROCOCCUS FURIOSUS; SOURCE 3 ORGANISM_TAXID: 2261; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYPOTHETICAL PROTEIN, PYROCOCCUS FURIOSUS, STRUCTURAL GENOMICS, PSI, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY FOR STRUCTURAL KEYWDS 3 GENOMICS, SECSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS (SECSG) REVDAT 5 14-FEB-24 1NNW 1 REMARK LINK REVDAT 4 11-OCT-17 1NNW 1 REMARK REVDAT 3 24-FEB-09 1NNW 1 VERSN REVDAT 2 01-FEB-05 1NNW 1 AUTHOR KEYWDS REMARK REVDAT 1 11-FEB-03 1NNW 0 JRNL AUTH SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS JRNL TITL SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS: JRNL TITL 2 HYPOTHETICAL PROTEIN FROM PYROCOCCUS FURIOSUS PFU-1218608 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKLIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 NUMBER OF REFLECTIONS : 43513 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2343 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2330 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2830 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3815 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 106 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.12 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.52000 REMARK 3 B22 (A**2) : 1.47000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : -1.20000 REMARK 3 B13 (A**2) : 1.81000 REMARK 3 B23 (A**2) : -0.51000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.139 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.115 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.071 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3912 ; 0.010 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 3678 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5322 ; 1.136 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8502 ; 0.795 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 500 ; 5.911 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 598 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4328 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 757 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 933 ; 0.200 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3956 ; 0.220 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 2651 ; 0.110 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 89 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 1 ; 0.009 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 9 ; 0.209 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.134 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2501 ; 0.531 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4041 ; 0.980 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1411 ; 1.309 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1281 ; 2.213 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1NNW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JAN-03. REMARK 100 THE DEPOSITION ID IS D_1000018046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-OCT-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.06 REMARK 200 MONOCHROMATOR : SI CHANNEL 220 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46373 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.890 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.89 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.19300 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, ISOPROPANOL, SODIUM CITRATE, REMARK 280 PH 5.6, MODIFIED MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 2 CHAINS. THE BIOLOGICAL UNIT IS UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 50.14000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 2 CG1 CG2 REMARK 470 GLU A 25 CD OE1 OE2 REMARK 470 GLU A 26 CD OE1 OE2 REMARK 470 GLU A 29 CB CG CD OE1 OE2 REMARK 470 LYS A 51 CD CE NZ REMARK 470 ASP A 59 CG OD1 OD2 REMARK 470 LYS A 62 CE NZ REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 LYS A 67 CE NZ REMARK 470 LYS A 92 CB CG CD CE NZ REMARK 470 LYS A 104 NZ REMARK 470 GLU A 113 CG CD OE1 OE2 REMARK 470 ARG A 115 NE CZ NH1 NH2 REMARK 470 LYS A 128 CD CE NZ REMARK 470 GLU A 148 CD OE1 OE2 REMARK 470 GLU A 152 OE1 OE2 REMARK 470 ARG A 188 NE CZ NH1 NH2 REMARK 470 LYS A 201 CD CE NZ REMARK 470 GLU A 202 CD OE1 OE2 REMARK 470 LYS A 204 CE NZ REMARK 470 ASP A 213 CG OD1 OD2 REMARK 470 LYS A 218 CE NZ REMARK 470 GLU A 231 CG CD OE1 OE2 REMARK 470 ARG A 234 NH1 NH2 REMARK 470 GLU A 241 CG CD OE1 OE2 REMARK 470 LYS A 244 CE NZ REMARK 470 ARG A 251 CD NE CZ NH1 NH2 REMARK 470 MET B 1 N CA O CB CG SD CE REMARK 470 VAL B 2 CG1 CG2 REMARK 470 GLU B 26 CD OE1 OE2 REMARK 470 GLU B 29 OE1 OE2 REMARK 470 GLU B 30 CD OE1 OE2 REMARK 470 GLU B 35 OE1 OE2 REMARK 470 LYS B 51 CD CE NZ REMARK 470 GLU B 55 CD OE1 OE2 REMARK 470 ASP B 59 CG OD1 OD2 REMARK 470 LYS B 62 CE NZ REMARK 470 LYS B 67 NZ REMARK 470 LYS B 92 CB CG CD CE NZ REMARK 470 GLU B 94 CG CD OE1 OE2 REMARK 470 LYS B 101 CE NZ REMARK 470 GLU B 108 CG CD OE1 OE2 REMARK 470 GLU B 113 CD OE1 OE2 REMARK 470 ARG B 115 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 128 CD CE NZ REMARK 470 GLU B 133 CD OE1 OE2 REMARK 470 GLU B 148 CD OE1 OE2 REMARK 470 GLU B 152 OE1 OE2 REMARK 470 GLU B 169 CD OE1 OE2 REMARK 470 LYS B 201 CE NZ REMARK 470 GLU B 202 CD OE1 OE2 REMARK 470 LYS B 204 CE NZ REMARK 470 LYS B 216 CE NZ REMARK 470 LYS B 218 CE NZ REMARK 470 GLU B 223 CD OE1 OE2 REMARK 470 LYS B 227 CB CG CD CE NZ REMARK 470 GLU B 231 CG CD OE1 OE2 REMARK 470 ARG B 234 NH1 NH2 REMARK 470 GLU B 240 CB CG CD OE1 OE2 REMARK 470 GLU B 241 CG CD OE1 OE2 REMARK 470 HIS B 248 CB CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 251 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 213 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 48 30.64 -85.37 REMARK 500 PRO A 87 35.78 -87.50 REMARK 500 MET A 177 -8.69 71.15 REMARK 500 PRO B 48 34.65 -86.87 REMARK 500 PRO B 87 36.62 -87.97 REMARK 500 MET B 177 -5.84 68.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 166 O REMARK 620 2 TYR A 168 O 88.8 REMARK 620 3 TYR A 186 O 108.4 93.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 PT B 302 PT REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 183 SD REMARK 620 2 MET B 183 SD 156.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS B 166 O REMARK 620 2 TYR B 168 O 87.1 REMARK 620 3 TYR B 186 O 109.6 98.7 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PT B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: PFU-1218608-001 RELATED DB: TARGETDB DBREF 1NNW A 1 252 UNP Q8U1C6 Q8U1C6_PYRFU 1 252 DBREF 1NNW B 1 252 UNP Q8U1C6 Q8U1C6_PYRFU 1 252 SEQRES 1 A 252 MET VAL TYR VAL ALA VAL LEU ALA ASN ILE ALA GLY ASN SEQRES 2 A 252 LEU PRO ALA LEU THR ALA ALA LEU SER ARG ILE GLU GLU SEQRES 3 A 252 MET ARG GLU GLU GLY TYR GLU ILE GLU LYS TYR TYR ILE SEQRES 4 A 252 LEU GLY ASN ILE VAL GLY LEU PHE PRO TYR PRO LYS GLU SEQRES 5 A 252 VAL ILE GLU VAL ILE LYS ASP LEU THR LYS LYS GLU ASN SEQRES 6 A 252 VAL LYS ILE ILE ARG GLY LYS TYR ASP GLN ILE ILE ALA SEQRES 7 A 252 MET SER ASP PRO HIS ALA THR ASP PRO GLY TYR ILE ASP SEQRES 8 A 252 LYS LEU GLU LEU PRO GLY HIS VAL LYS LYS ALA LEU LYS SEQRES 9 A 252 PHE THR TRP GLU LYS LEU GLY HIS GLU GLY ARG GLU TYR SEQRES 10 A 252 LEU ARG ASP LEU PRO ILE TYR LEU VAL ASP LYS ILE GLY SEQRES 11 A 252 GLY ASN GLU VAL PHE GLY VAL TYR GLY SER PRO ILE ASN SEQRES 12 A 252 PRO PHE ASP GLY GLU VAL LEU ALA GLU GLN PRO THR SER SEQRES 13 A 252 TYR TYR GLU ALA ILE MET ARG PRO VAL LYS ASP TYR GLU SEQRES 14 A 252 MET LEU ILE VAL ALA SER PRO MET TYR PRO VAL ASP ALA SEQRES 15 A 252 MET THR ARG TYR GLY ARG VAL VAL CYS PRO GLY SER VAL SEQRES 16 A 252 GLY PHE PRO PRO GLY LYS GLU HIS LYS ALA THR PHE ALA SEQRES 17 A 252 LEU VAL ASP VAL ASP THR LEU LYS PRO LYS PHE ILE GLU SEQRES 18 A 252 VAL GLU TYR ASP LYS LYS ILE ILE GLU GLU ARG ILE ARG SEQRES 19 A 252 ALA GLU GLY LEU PRO GLU GLU ILE ILE LYS ILE LEU TYR SEQRES 20 A 252 HIS GLY GLY ARG PRO SEQRES 1 B 252 MET VAL TYR VAL ALA VAL LEU ALA ASN ILE ALA GLY ASN SEQRES 2 B 252 LEU PRO ALA LEU THR ALA ALA LEU SER ARG ILE GLU GLU SEQRES 3 B 252 MET ARG GLU GLU GLY TYR GLU ILE GLU LYS TYR TYR ILE SEQRES 4 B 252 LEU GLY ASN ILE VAL GLY LEU PHE PRO TYR PRO LYS GLU SEQRES 5 B 252 VAL ILE GLU VAL ILE LYS ASP LEU THR LYS LYS GLU ASN SEQRES 6 B 252 VAL LYS ILE ILE ARG GLY LYS TYR ASP GLN ILE ILE ALA SEQRES 7 B 252 MET SER ASP PRO HIS ALA THR ASP PRO GLY TYR ILE ASP SEQRES 8 B 252 LYS LEU GLU LEU PRO GLY HIS VAL LYS LYS ALA LEU LYS SEQRES 9 B 252 PHE THR TRP GLU LYS LEU GLY HIS GLU GLY ARG GLU TYR SEQRES 10 B 252 LEU ARG ASP LEU PRO ILE TYR LEU VAL ASP LYS ILE GLY SEQRES 11 B 252 GLY ASN GLU VAL PHE GLY VAL TYR GLY SER PRO ILE ASN SEQRES 12 B 252 PRO PHE ASP GLY GLU VAL LEU ALA GLU GLN PRO THR SER SEQRES 13 B 252 TYR TYR GLU ALA ILE MET ARG PRO VAL LYS ASP TYR GLU SEQRES 14 B 252 MET LEU ILE VAL ALA SER PRO MET TYR PRO VAL ASP ALA SEQRES 15 B 252 MET THR ARG TYR GLY ARG VAL VAL CYS PRO GLY SER VAL SEQRES 16 B 252 GLY PHE PRO PRO GLY LYS GLU HIS LYS ALA THR PHE ALA SEQRES 17 B 252 LEU VAL ASP VAL ASP THR LEU LYS PRO LYS PHE ILE GLU SEQRES 18 B 252 VAL GLU TYR ASP LYS LYS ILE ILE GLU GLU ARG ILE ARG SEQRES 19 B 252 ALA GLU GLY LEU PRO GLU GLU ILE ILE LYS ILE LEU TYR SEQRES 20 B 252 HIS GLY GLY ARG PRO HET PT A 301 1 HET PT A 302 1 HET NA A 303 1 HET PT B 301 1 HET PT B 302 1 HET NA B 303 1 HETNAM PT PLATINUM (II) ION HETNAM NA SODIUM ION FORMUL 3 PT 4(PT 2+) FORMUL 5 NA 2(NA 1+) FORMUL 9 HOH *106(H2 O) HELIX 1 1 ASN A 13 GLU A 30 1 18 HELIX 2 2 TYR A 49 GLU A 64 1 16 HELIX 3 3 GLY A 71 SER A 80 1 10 HELIX 4 4 PRO A 87 LEU A 93 5 7 HELIX 5 5 PRO A 96 ASP A 120 1 25 HELIX 6 6 PRO A 154 ARG A 163 1 10 HELIX 7 7 PRO A 164 LYS A 166 5 3 HELIX 8 8 LYS A 226 GLY A 237 1 12 HELIX 9 9 PRO A 239 GLY A 249 1 11 HELIX 10 10 ASN B 13 GLU B 30 1 18 HELIX 11 11 TYR B 49 GLU B 64 1 16 HELIX 12 12 GLY B 71 MET B 79 1 9 HELIX 13 13 PRO B 87 LEU B 93 5 7 HELIX 14 14 PRO B 96 LEU B 121 1 26 HELIX 15 15 PRO B 154 ARG B 163 1 10 HELIX 16 16 PRO B 164 LYS B 166 5 3 HELIX 17 17 ASP B 225 GLU B 236 1 12 HELIX 18 18 PRO B 239 GLY B 249 1 11 SHEET 1 A 5 VAL A 66 ILE A 69 0 SHEET 2 A 5 ILE A 34 LEU A 40 1 N ILE A 39 O LYS A 67 SHEET 3 A 5 TYR A 3 ALA A 8 1 N LEU A 7 O LEU A 40 SHEET 4 A 5 ALA A 205 ASP A 211 -1 O ALA A 208 N VAL A 6 SHEET 5 A 5 PRO A 217 VAL A 222 -1 O ILE A 220 N PHE A 207 SHEET 1 B 5 LEU A 125 ILE A 129 0 SHEET 2 B 5 ASN A 132 VAL A 137 -1 O VAL A 134 N ASP A 127 SHEET 3 B 5 MET A 170 VAL A 173 1 O MET A 170 N PHE A 135 SHEET 4 B 5 GLY A 187 PRO A 192 1 O VAL A 190 N LEU A 171 SHEET 5 B 5 PRO A 179 THR A 184 -1 N ALA A 182 O VAL A 189 SHEET 1 C 5 VAL B 66 ILE B 68 0 SHEET 2 C 5 ILE B 34 LEU B 40 1 N ILE B 39 O LYS B 67 SHEET 3 C 5 TYR B 3 ALA B 8 1 N LEU B 7 O LEU B 40 SHEET 4 C 5 ALA B 205 ASP B 211 -1 O ALA B 208 N VAL B 6 SHEET 5 C 5 PRO B 217 VAL B 222 -1 O ILE B 220 N PHE B 207 SHEET 1 D 5 LEU B 125 ILE B 129 0 SHEET 2 D 5 ASN B 132 VAL B 137 -1 O VAL B 134 N ASP B 127 SHEET 3 D 5 MET B 170 VAL B 173 1 O MET B 170 N PHE B 135 SHEET 4 D 5 GLY B 187 PRO B 192 1 O VAL B 190 N LEU B 171 SHEET 5 D 5 PRO B 179 THR B 184 -1 N ALA B 182 O VAL B 189 LINK SD MET A 79 PT PT A 301 1555 1555 2.42 LINK O LYS A 166 NA NA A 303 1555 1555 2.38 LINK O TYR A 168 NA NA A 303 1555 1555 2.37 LINK SD MET A 183 PT PT A 302 1555 1555 2.19 LINK SD MET A 183 PT PT B 302 1455 1555 3.00 LINK O TYR A 186 NA NA A 303 1555 1555 2.25 LINK SD MET B 79 PT PT B 301 1555 1555 2.76 LINK O LYS B 166 NA NA B 303 1555 1555 2.54 LINK O TYR B 168 NA NA B 303 1555 1555 2.37 LINK SD MET B 183 PT PT B 302 1555 1555 3.15 LINK O TYR B 186 NA NA B 303 1555 1555 2.10 CISPEP 1 GLY A 41 ASN A 42 0 -2.60 CISPEP 2 GLY B 41 ASN B 42 0 -2.59 SITE 1 AC1 1 MET A 79 SITE 1 AC2 1 MET A 183 SITE 1 AC3 3 LYS A 166 TYR A 168 TYR A 186 SITE 1 AC4 1 MET B 79 SITE 1 AC5 2 MET A 183 MET B 183 SITE 1 AC6 3 LYS B 166 TYR B 168 TYR B 186 CRYST1 50.140 50.842 64.403 83.70 81.64 81.77 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019944 -0.002885 -0.002680 0.00000 SCALE2 0.000000 0.019873 -0.001812 0.00000 SCALE3 0.000000 0.000000 0.015759 0.00000