HEADER HYDROLASE/DNA 16-JAN-03 1NOP TITLE CRYSTAL STRUCTURE OF HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1) IN TITLE 2 COMPLEX WITH VANADATE, DNA AND A HUMAN TOPOISOMERASE I-DERIVED TITLE 3 PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-D(*AP*GP*AP*GP*TP*T)-3'; COMPND 3 CHAIN: D, F; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TYROSYL-DNA PHOSPHODIESTERASE 1; COMPND 7 CHAIN: A, B; COMPND 8 FRAGMENT: RESIDUES 149-608; COMPND 9 SYNONYM: TDP1; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: TOPOISOMERASE I-DERIVED PEPTIDE; COMPND 14 CHAIN: C; COMPND 15 FRAGMENT: RESIDUES 720-727; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THIS SEQUENCE IS DERIVED FROM A SEQUENCE KNOWN TO BE SOURCE 4 A TARGET FOR TOPOISOMERASE I; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 11 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMAN TOPOISOMERASE SOURCE 17 I. THIS SEQUENCE INCLUDES THE CATALYTIC TYROSINE RESIDUE THAT SOURCE 18 BECOMES TRANSIENTLY COVALENTLY ATTATCHED TO THE 3' END OF DNA KEYWDS PROTEIN-DNA COMPLEX, VANADATE COMPLEX, TRANSITION STATE MIMIC, KEYWDS 2 HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.R.DAVIES,H.INTERTHAL,J.J.CHAMPOUX,W.G.J.HOL REVDAT 4 14-FEB-24 1NOP 1 REMARK REVDAT 3 27-OCT-21 1NOP 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1NOP 1 VERSN REVDAT 1 11-MAR-03 1NOP 0 JRNL AUTH D.R.DAVIES,H.INTERTHAL,J.J.CHAMPOUX,W.G.J.HOL JRNL TITL CRYSTAL STRUCTURE OF A TRANSITION STATE MIMIC FOR TDP1 JRNL TITL 2 ASSEMBLED FROM VANADATE, DNA, AND A TOPOISOMERASE I-DERIVED JRNL TITL 3 PEPTIDE JRNL REF CHEM.BIOL. V. 10 139 2003 JRNL REFN ISSN 1074-5521 JRNL PMID 12618186 JRNL DOI 10.1016/S1074-5521(03)00021-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.R.DAVIES,H.INTERTHAL,J.J.CHAMPOUX,W.G.J.HOL REMARK 1 TITL THE CRYSTAL STRUCTURE OF HUMAN TYROSYL-DNA REMARK 1 TITL 2 PHOSPHODIESTERASE, TDP1 REMARK 1 REF STRUCTURE V. 10 237 2002 REMARK 1 REFN ISSN 0969-2126 REMARK 1 DOI 10.1016/S0969-2126(02)00707-4 REMARK 1 REFERENCE 2 REMARK 1 AUTH D.R.DAVIES,H.INTERTHAL,J.J.CHAMPOUX,W.G.J.HOL REMARK 1 TITL INSIGHTS INTO SUBSTRATE BINDING AND CATALYTIC MECHANISM OF REMARK 1 TITL 2 HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1) FROM VANADATE- REMARK 1 TITL 3 AND TUNGSTATE-INHIBITED STRUCTURES REMARK 1 REF J.MOL.BIOL. V. 324 917 2002 REMARK 1 REFN ISSN 0022-2836 REMARK 1 DOI 10.1016/S0022-2836(02)01154-3 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 41018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2169 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2019 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 61.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 106 REMARK 3 BIN FREE R VALUE : 0.3180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6888 REMARK 3 NUCLEIC ACID ATOMS : 82 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.23000 REMARK 3 B22 (A**2) : 4.03000 REMARK 3 B33 (A**2) : -1.80000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.368 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.250 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.171 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.144 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7205 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9805 ; 1.387 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 855 ; 6.748 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1037 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5436 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3047 ; 0.204 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 302 ; 0.345 ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 38 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 1 ; 0.092 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4311 ; 1.205 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6949 ; 2.089 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2894 ; 1.177 ; 2.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2856 ; 1.819 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1NOP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-03. REMARK 100 THE DEPOSITION ID IS D_1000018064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : CUSTOM-MADE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41018 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 95.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08500 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 61.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.33900 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3000, SODIUM CHLORIDE, SPERMINE, REMARK 280 HEPES, PH 7.8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.90150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 96.96200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.35950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 96.96200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.90150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.35950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: ONE MONOMER OF TDP1 IS THE BIOLOGICALLY ACTIVE ASSEMBLY REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: F, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 THE STRUCTURE IS A MIMIC OF THE TRANSITION REMARK 400 STATE FOR HYDROLYSIS OF THE TDP1 SUBSTRATE, REMARK 400 A COVALENT TOPOISOMERASE I-DNA COMPLEX. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DA D 801 REMARK 465 DG D 802 REMARK 465 DA D 803 REMARK 465 DA F 801 REMARK 465 DG F 802 REMARK 465 DA F 803 REMARK 465 DG F 804 REMARK 465 DT F 805 REMARK 465 MET A 124 REMARK 465 GLY A 125 REMARK 465 SER A 126 REMARK 465 SER A 127 REMARK 465 HIS A 128 REMARK 465 HIS A 129 REMARK 465 HIS A 130 REMARK 465 HIS A 131 REMARK 465 HIS A 132 REMARK 465 HIS A 133 REMARK 465 SER A 134 REMARK 465 SER A 135 REMARK 465 GLY A 136 REMARK 465 LEU A 137 REMARK 465 VAL A 138 REMARK 465 PRO A 139 REMARK 465 ARG A 140 REMARK 465 GLY A 141 REMARK 465 SER A 142 REMARK 465 HIS A 143 REMARK 465 MET A 144 REMARK 465 LEU A 145 REMARK 465 GLU A 146 REMARK 465 ASP A 147 REMARK 465 PRO A 148 REMARK 465 GLY A 149 REMARK 465 GLU A 150 REMARK 465 GLY A 151 REMARK 465 GLN A 152 REMARK 465 ASP A 153 REMARK 465 ILE A 154 REMARK 465 TRP A 155 REMARK 465 ASP A 156 REMARK 465 MET A 157 REMARK 465 LEU A 158 REMARK 465 ASP A 159 REMARK 465 LYS A 160 REMARK 465 GLY A 161 REMARK 465 PRO A 387 REMARK 465 ASN A 388 REMARK 465 ALA A 389 REMARK 465 GLU A 390 REMARK 465 LYS A 425 REMARK 465 GLU A 426 REMARK 465 SER A 427 REMARK 465 LYS A 428 REMARK 465 THR A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 LYS A 432 REMARK 465 SER A 433 REMARK 465 SER A 434 REMARK 465 PHE A 560 REMARK 465 ALA A 561 REMARK 465 GLY A 562 REMARK 465 SER A 563 REMARK 465 GLN A 564 REMARK 465 GLU A 565 REMARK 465 PRO A 566 REMARK 465 MET A 567 REMARK 465 MET B 124 REMARK 465 GLY B 125 REMARK 465 SER B 126 REMARK 465 SER B 127 REMARK 465 HIS B 128 REMARK 465 HIS B 129 REMARK 465 HIS B 130 REMARK 465 HIS B 131 REMARK 465 HIS B 132 REMARK 465 HIS B 133 REMARK 465 SER B 134 REMARK 465 SER B 135 REMARK 465 GLY B 136 REMARK 465 LEU B 137 REMARK 465 VAL B 138 REMARK 465 PRO B 139 REMARK 465 ARG B 140 REMARK 465 GLY B 141 REMARK 465 SER B 142 REMARK 465 HIS B 143 REMARK 465 MET B 144 REMARK 465 LEU B 145 REMARK 465 GLU B 146 REMARK 465 ASP B 147 REMARK 465 PRO B 148 REMARK 465 GLY B 149 REMARK 465 GLU B 150 REMARK 465 GLY B 151 REMARK 465 GLN B 152 REMARK 465 ASP B 153 REMARK 465 ILE B 154 REMARK 465 TRP B 155 REMARK 465 ASP B 156 REMARK 465 MET B 157 REMARK 465 LEU B 158 REMARK 465 LYS B 425 REMARK 465 GLU B 426 REMARK 465 SER B 427 REMARK 465 LYS B 428 REMARK 465 THR B 429 REMARK 465 PRO B 430 REMARK 465 GLY B 431 REMARK 465 LYS B 432 REMARK 465 SER B 433 REMARK 465 PHE B 560 REMARK 465 ALA B 561 REMARK 465 GLY B 562 REMARK 465 SER B 563 REMARK 465 GLN B 564 REMARK 465 GLU B 565 REMARK 465 PRO B 566 REMARK 465 SER B 608 REMARK 465 ASP C 725 REMARK 465 PRO C 726 REMARK 465 ARG C 727 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 246 CG CD OE1 OE2 REMARK 470 ASP A 307 CG OD1 OD2 REMARK 470 LYS A 558 CG CD CE NZ REMARK 470 LYS A 596 CG CD CE NZ REMARK 470 ASP B 307 CG OD1 OD2 REMARK 470 THR B 309 OG1 CG2 REMARK 470 GLU B 337 CG CD OE1 OE2 REMARK 470 LYS B 344 CG CD CE NZ REMARK 470 GLN B 557 CG CD OE1 NE2 REMARK 470 LYS B 558 CG CD CE NZ REMARK 470 MET B 567 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 805 O4' - C1' - N1 ANGL. DEV. = -5.0 DEGREES REMARK 500 DT D 805 C4 - C5 - C7 ANGL. DEV. = 3.7 DEGREES REMARK 500 ASP A 209 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 340 CB - CG - OD2 ANGL. DEV. = 9.2 DEGREES REMARK 500 ASP A 407 CB - CG - OD2 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP A 599 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ASP B 209 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP B 407 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP B 599 CB - CG - OD2 ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 204 -63.90 -99.68 REMARK 500 ARG A 232 -118.71 51.71 REMARK 500 LEU A 255 76.71 -119.39 REMARK 500 HIS A 290 -69.38 -94.40 REMARK 500 TRP A 411 -51.14 -163.59 REMARK 500 SER A 414 -93.45 -75.21 REMARK 500 GLN A 470 43.76 -140.02 REMARK 500 ALA A 482 52.71 -147.85 REMARK 500 LYS A 527 62.86 35.69 REMARK 500 ASN A 528 121.21 -33.93 REMARK 500 THR A 600 -39.09 -38.44 REMARK 500 TYR B 204 -63.31 -98.61 REMARK 500 ARG B 232 -117.65 50.38 REMARK 500 HIS B 290 -68.39 -102.15 REMARK 500 ALA B 306 159.63 -48.85 REMARK 500 TRP B 411 -57.51 -160.07 REMARK 500 SER B 414 -72.04 -97.39 REMARK 500 GLN B 470 45.39 -149.52 REMARK 500 ALA B 482 43.51 -155.27 REMARK 500 ALA B 568 40.70 -90.74 REMARK 500 ASN C 722 -174.09 -170.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 527 ASN A 528 -139.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VO4 A 699 V REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT D 806 O3' REMARK 620 2 VO4 A 699 O1 121.6 REMARK 620 3 VO4 A 699 O3 111.3 126.7 REMARK 620 4 HIS A 263 NE2 84.6 104.5 85.7 REMARK 620 5 TYR C 723 OH 89.1 86.0 88.7 169.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VO4 B 699 V REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DT F 806 O3' REMARK 620 2 VO4 B 699 O1 127.5 REMARK 620 3 VO4 B 699 O3 104.6 127.9 REMARK 620 4 HIS B 263 NE2 81.8 101.4 83.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 A 699 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 B 699 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JY1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1) REMARK 900 RELATED ID: 1MU7 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1)- REMARK 900 TUNGSTATE COMPLEX REMARK 900 RELATED ID: 1MU9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A HUMAN TYROSYL-DNA PHOSPHODIESTERASE (TDP1)- REMARK 900 VANADATE COMPLEX DBREF 1NOP A 149 608 GB 20127586 NP_060789 149 608 DBREF 1NOP B 149 608 GB 20127586 NP_060789 149 608 DBREF 1NOP D 801 806 PDB 1NOP 1NOP 801 806 DBREF 1NOP F 801 806 PDB 1NOP 1NOP 801 806 DBREF 1NOP C 720 727 PDB 1NOP 1NOP 720 727 SEQADV 1NOP MET A 124 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY A 125 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER A 126 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER A 127 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 128 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 129 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 130 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 131 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 132 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 133 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER A 134 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER A 135 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY A 136 GB 20127586 CLONING ARTIFACT SEQADV 1NOP LEU A 137 GB 20127586 CLONING ARTIFACT SEQADV 1NOP VAL A 138 GB 20127586 CLONING ARTIFACT SEQADV 1NOP PRO A 139 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ARG A 140 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY A 141 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER A 142 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS A 143 GB 20127586 CLONING ARTIFACT SEQADV 1NOP MET A 144 GB 20127586 CLONING ARTIFACT SEQADV 1NOP LEU A 145 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLU A 146 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ASP A 147 GB 20127586 CLONING ARTIFACT SEQADV 1NOP PRO A 148 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ASN A 322 GB 20127586 ASP 322 ENGINEERED MUTATION SEQADV 1NOP THR A 328 GB 20127586 MET 328 ENGINEERED MUTATION SEQADV 1NOP LEU A 548 GB 20127586 PHE 548 ENGINEERED MUTATION SEQADV 1NOP MET B 124 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY B 125 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER B 126 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER B 127 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 128 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 129 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 130 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 131 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 132 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 133 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER B 134 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER B 135 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY B 136 GB 20127586 CLONING ARTIFACT SEQADV 1NOP LEU B 137 GB 20127586 CLONING ARTIFACT SEQADV 1NOP VAL B 138 GB 20127586 CLONING ARTIFACT SEQADV 1NOP PRO B 139 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ARG B 140 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLY B 141 GB 20127586 CLONING ARTIFACT SEQADV 1NOP SER B 142 GB 20127586 CLONING ARTIFACT SEQADV 1NOP HIS B 143 GB 20127586 CLONING ARTIFACT SEQADV 1NOP MET B 144 GB 20127586 CLONING ARTIFACT SEQADV 1NOP LEU B 145 GB 20127586 CLONING ARTIFACT SEQADV 1NOP GLU B 146 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ASP B 147 GB 20127586 CLONING ARTIFACT SEQADV 1NOP PRO B 148 GB 20127586 CLONING ARTIFACT SEQADV 1NOP ASN B 322 GB 20127586 ASP 322 ENGINEERED MUTATION SEQADV 1NOP THR B 328 GB 20127586 MET 328 ENGINEERED MUTATION SEQADV 1NOP LEU B 548 GB 20127586 PHE 548 ENGINEERED MUTATION SEQRES 1 D 6 DA DG DA DG DT DT SEQRES 1 F 6 DA DG DA DG DT DT SEQRES 1 A 485 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 485 LEU VAL PRO ARG GLY SER HIS MET LEU GLU ASP PRO GLY SEQRES 3 A 485 GLU GLY GLN ASP ILE TRP ASP MET LEU ASP LYS GLY ASN SEQRES 4 A 485 PRO PHE GLN PHE TYR LEU THR ARG VAL SER GLY VAL LYS SEQRES 5 A 485 PRO LYS TYR ASN SER GLY ALA LEU HIS ILE LYS ASP ILE SEQRES 6 A 485 LEU SER PRO LEU PHE GLY THR LEU VAL SER SER ALA GLN SEQRES 7 A 485 PHE ASN TYR CYS PHE ASP VAL ASP TRP LEU VAL LYS GLN SEQRES 8 A 485 TYR PRO PRO GLU PHE ARG LYS LYS PRO ILE LEU LEU VAL SEQRES 9 A 485 HIS GLY ASP LYS ARG GLU ALA LYS ALA HIS LEU HIS ALA SEQRES 10 A 485 GLN ALA LYS PRO TYR GLU ASN ILE SER LEU CYS GLN ALA SEQRES 11 A 485 LYS LEU ASP ILE ALA PHE GLY THR HIS HIS THR LYS MET SEQRES 12 A 485 MET LEU LEU LEU TYR GLU GLU GLY LEU ARG VAL VAL ILE SEQRES 13 A 485 HIS THR SER ASN LEU ILE HIS ALA ASP TRP HIS GLN LYS SEQRES 14 A 485 THR GLN GLY ILE TRP LEU SER PRO LEU TYR PRO ARG ILE SEQRES 15 A 485 ALA ASP GLY THR HIS LYS SER GLY GLU SER PRO THR HIS SEQRES 16 A 485 PHE LYS ALA ASN LEU ILE SER TYR LEU THR ALA TYR ASN SEQRES 17 A 485 ALA PRO SER LEU LYS GLU TRP ILE ASP VAL ILE HIS LYS SEQRES 18 A 485 HIS ASP LEU SER GLU THR ASN VAL TYR LEU ILE GLY SER SEQRES 19 A 485 THR PRO GLY ARG PHE GLN GLY SER GLN LYS ASP ASN TRP SEQRES 20 A 485 GLY HIS PHE ARG LEU LYS LYS LEU LEU LYS ASP HIS ALA SEQRES 21 A 485 SER SER MET PRO ASN ALA GLU SER TRP PRO VAL VAL GLY SEQRES 22 A 485 GLN PHE SER SER VAL GLY SER LEU GLY ALA ASP GLU SER SEQRES 23 A 485 LYS TRP LEU CYS SER GLU PHE LYS GLU SER MET LEU THR SEQRES 24 A 485 LEU GLY LYS GLU SER LYS THR PRO GLY LYS SER SER VAL SEQRES 25 A 485 PRO LEU TYR LEU ILE TYR PRO SER VAL GLU ASN VAL ARG SEQRES 26 A 485 THR SER LEU GLU GLY TYR PRO ALA GLY GLY SER LEU PRO SEQRES 27 A 485 TYR SER ILE GLN THR ALA GLU LYS GLN ASN TRP LEU HIS SEQRES 28 A 485 SER TYR PHE HIS LYS TRP SER ALA GLU THR SER GLY ARG SEQRES 29 A 485 SER ASN ALA MET PRO HIS ILE LYS THR TYR MET ARG PRO SEQRES 30 A 485 SER PRO ASP PHE SER LYS ILE ALA TRP PHE LEU VAL THR SEQRES 31 A 485 SER ALA ASN LEU SER LYS ALA ALA TRP GLY ALA LEU GLU SEQRES 32 A 485 LYS ASN GLY THR GLN LEU MET ILE ARG SER TYR GLU LEU SEQRES 33 A 485 GLY VAL LEU PHE LEU PRO SER ALA LEU GLY LEU ASP SER SEQRES 34 A 485 PHE LYS VAL LYS GLN LYS PHE PHE ALA GLY SER GLN GLU SEQRES 35 A 485 PRO MET ALA THR PHE PRO VAL PRO TYR ASP LEU PRO PRO SEQRES 36 A 485 GLU LEU TYR GLY SER LYS ASP ARG PRO TRP ILE TRP ASN SEQRES 37 A 485 ILE PRO TYR VAL LYS ALA PRO ASP THR HIS GLY ASN MET SEQRES 38 A 485 TRP VAL PRO SER SEQRES 1 B 485 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 485 LEU VAL PRO ARG GLY SER HIS MET LEU GLU ASP PRO GLY SEQRES 3 B 485 GLU GLY GLN ASP ILE TRP ASP MET LEU ASP LYS GLY ASN SEQRES 4 B 485 PRO PHE GLN PHE TYR LEU THR ARG VAL SER GLY VAL LYS SEQRES 5 B 485 PRO LYS TYR ASN SER GLY ALA LEU HIS ILE LYS ASP ILE SEQRES 6 B 485 LEU SER PRO LEU PHE GLY THR LEU VAL SER SER ALA GLN SEQRES 7 B 485 PHE ASN TYR CYS PHE ASP VAL ASP TRP LEU VAL LYS GLN SEQRES 8 B 485 TYR PRO PRO GLU PHE ARG LYS LYS PRO ILE LEU LEU VAL SEQRES 9 B 485 HIS GLY ASP LYS ARG GLU ALA LYS ALA HIS LEU HIS ALA SEQRES 10 B 485 GLN ALA LYS PRO TYR GLU ASN ILE SER LEU CYS GLN ALA SEQRES 11 B 485 LYS LEU ASP ILE ALA PHE GLY THR HIS HIS THR LYS MET SEQRES 12 B 485 MET LEU LEU LEU TYR GLU GLU GLY LEU ARG VAL VAL ILE SEQRES 13 B 485 HIS THR SER ASN LEU ILE HIS ALA ASP TRP HIS GLN LYS SEQRES 14 B 485 THR GLN GLY ILE TRP LEU SER PRO LEU TYR PRO ARG ILE SEQRES 15 B 485 ALA ASP GLY THR HIS LYS SER GLY GLU SER PRO THR HIS SEQRES 16 B 485 PHE LYS ALA ASN LEU ILE SER TYR LEU THR ALA TYR ASN SEQRES 17 B 485 ALA PRO SER LEU LYS GLU TRP ILE ASP VAL ILE HIS LYS SEQRES 18 B 485 HIS ASP LEU SER GLU THR ASN VAL TYR LEU ILE GLY SER SEQRES 19 B 485 THR PRO GLY ARG PHE GLN GLY SER GLN LYS ASP ASN TRP SEQRES 20 B 485 GLY HIS PHE ARG LEU LYS LYS LEU LEU LYS ASP HIS ALA SEQRES 21 B 485 SER SER MET PRO ASN ALA GLU SER TRP PRO VAL VAL GLY SEQRES 22 B 485 GLN PHE SER SER VAL GLY SER LEU GLY ALA ASP GLU SER SEQRES 23 B 485 LYS TRP LEU CYS SER GLU PHE LYS GLU SER MET LEU THR SEQRES 24 B 485 LEU GLY LYS GLU SER LYS THR PRO GLY LYS SER SER VAL SEQRES 25 B 485 PRO LEU TYR LEU ILE TYR PRO SER VAL GLU ASN VAL ARG SEQRES 26 B 485 THR SER LEU GLU GLY TYR PRO ALA GLY GLY SER LEU PRO SEQRES 27 B 485 TYR SER ILE GLN THR ALA GLU LYS GLN ASN TRP LEU HIS SEQRES 28 B 485 SER TYR PHE HIS LYS TRP SER ALA GLU THR SER GLY ARG SEQRES 29 B 485 SER ASN ALA MET PRO HIS ILE LYS THR TYR MET ARG PRO SEQRES 30 B 485 SER PRO ASP PHE SER LYS ILE ALA TRP PHE LEU VAL THR SEQRES 31 B 485 SER ALA ASN LEU SER LYS ALA ALA TRP GLY ALA LEU GLU SEQRES 32 B 485 LYS ASN GLY THR GLN LEU MET ILE ARG SER TYR GLU LEU SEQRES 33 B 485 GLY VAL LEU PHE LEU PRO SER ALA LEU GLY LEU ASP SER SEQRES 34 B 485 PHE LYS VAL LYS GLN LYS PHE PHE ALA GLY SER GLN GLU SEQRES 35 B 485 PRO MET ALA THR PHE PRO VAL PRO TYR ASP LEU PRO PRO SEQRES 36 B 485 GLU LEU TYR GLY SER LYS ASP ARG PRO TRP ILE TRP ASN SEQRES 37 B 485 ILE PRO TYR VAL LYS ALA PRO ASP THR HIS GLY ASN MET SEQRES 38 B 485 TRP VAL PRO SER SEQRES 1 C 8 LYS LEU ASN TYR LEU ASP PRO ARG HET VO4 A 699 3 HET VO4 B 699 3 HETNAM VO4 VANADATE ION FORMUL 6 VO4 2(O4 V 3-) FORMUL 8 HOH *96(H2 O) HELIX 1 1 LYS A 175 ASN A 179 5 5 HELIX 2 2 HIS A 184 SER A 190 1 7 HELIX 3 3 PRO A 191 GLY A 194 5 4 HELIX 4 4 ASP A 207 TYR A 215 1 9 HELIX 5 5 PRO A 216 ARG A 220 5 5 HELIX 6 6 LYS A 231 LYS A 243 1 13 HELIX 7 7 ILE A 285 HIS A 290 5 6 HELIX 8 8 HIS A 318 ALA A 329 1 12 HELIX 9 9 ALA A 332 HIS A 345 1 14 HELIX 10 10 GLN A 363 ASN A 369 5 7 HELIX 11 11 TRP A 370 ALA A 383 1 14 HELIX 12 12 SER A 414 THR A 422 1 9 HELIX 13 13 SER A 443 THR A 449 1 7 HELIX 14 14 GLY A 453 LEU A 460 5 8 HELIX 15 15 SER A 463 GLU A 468 1 6 HELIX 16 16 LYS A 469 SER A 475 5 7 HELIX 17 17 ALA A 482 GLY A 486 5 5 HELIX 18 18 SER A 518 GLY A 523 1 6 HELIX 19 19 LEU A 544 GLY A 549 5 6 HELIX 20 20 LYS B 175 ASN B 179 5 5 HELIX 21 21 HIS B 184 SER B 190 1 7 HELIX 22 22 PRO B 191 GLY B 194 5 4 HELIX 23 23 ASP B 207 TYR B 215 1 9 HELIX 24 24 PRO B 216 ARG B 220 5 5 HELIX 25 25 LYS B 231 LYS B 243 1 13 HELIX 26 26 HIS B 286 HIS B 290 5 5 HELIX 27 27 HIS B 318 ALA B 329 1 12 HELIX 28 28 ALA B 332 LYS B 344 1 13 HELIX 29 29 GLN B 363 ASN B 369 5 7 HELIX 30 30 TRP B 370 ALA B 383 1 14 HELIX 31 31 ASN B 388 TRP B 392 5 5 HELIX 32 32 GLU B 415 LEU B 421 1 7 HELIX 33 33 SER B 443 THR B 449 1 7 HELIX 34 34 GLY B 453 LEU B 460 5 8 HELIX 35 35 SER B 463 GLU B 468 1 6 HELIX 36 36 LYS B 469 SER B 475 5 7 HELIX 37 37 ALA B 482 GLY B 486 5 5 HELIX 38 38 SER B 518 GLY B 523 1 6 HELIX 39 39 LEU B 544 GLY B 549 5 6 SHEET 1 A 7 PHE A 166 LEU A 168 0 SHEET 2 A 7 GLY A 295 LEU A 298 -1 O ILE A 296 N TYR A 167 SHEET 3 A 7 LEU A 275 HIS A 280 -1 N ILE A 279 O TRP A 297 SHEET 4 A 7 MET A 266 TYR A 271 -1 N LEU A 269 O ARG A 276 SHEET 5 A 7 LEU A 196 PHE A 202 -1 N PHE A 202 O MET A 266 SHEET 6 A 7 ILE A 224 HIS A 228 1 O LEU A 225 N GLN A 201 SHEET 7 A 7 ILE A 248 GLN A 252 1 O CYS A 251 N LEU A 226 SHEET 1 B 7 TYR A 353 SER A 357 0 SHEET 2 B 7 GLU A 538 PHE A 543 -1 O GLU A 538 N SER A 357 SHEET 3 B 7 LYS A 506 THR A 513 -1 N PHE A 510 O PHE A 543 SHEET 4 B 7 THR A 496 PRO A 500 -1 N TYR A 497 O LEU A 511 SHEET 5 B 7 VAL A 394 GLN A 397 -1 N VAL A 395 O MET A 498 SHEET 6 B 7 LEU A 437 ILE A 440 1 O TYR A 438 N VAL A 394 SHEET 7 B 7 PHE A 477 HIS A 478 1 O HIS A 478 N LEU A 439 SHEET 1 C 5 TYR A 353 SER A 357 0 SHEET 2 C 5 GLU A 538 PHE A 543 -1 O GLU A 538 N SER A 357 SHEET 3 C 5 LYS A 506 THR A 513 -1 N PHE A 510 O PHE A 543 SHEET 4 C 5 PHE A 553 VAL A 555 -1 O PHE A 553 N ILE A 507 SHEET 5 C 5 THR A 569 PHE A 570 1 O PHE A 570 N LYS A 554 SHEET 1 D 3 GLY A 360 PHE A 362 0 SHEET 2 D 3 GLN A 531 ILE A 534 -1 O ILE A 534 N GLY A 360 SHEET 3 D 3 ALA A 524 GLU A 526 -1 N GLU A 526 O GLN A 531 SHEET 1 E 7 PHE B 166 LEU B 168 0 SHEET 2 E 7 GLY B 295 LEU B 298 -1 O ILE B 296 N TYR B 167 SHEET 3 E 7 LEU B 275 HIS B 280 -1 N ILE B 279 O TRP B 297 SHEET 4 E 7 MET B 266 TYR B 271 -1 N LEU B 269 O ARG B 276 SHEET 5 E 7 LEU B 196 PHE B 202 -1 N PHE B 202 O MET B 266 SHEET 6 E 7 ILE B 224 HIS B 228 1 O LEU B 225 N GLN B 201 SHEET 7 E 7 ILE B 248 GLN B 252 1 O SER B 249 N ILE B 224 SHEET 1 F 7 TYR B 353 SER B 357 0 SHEET 2 F 7 GLU B 538 PHE B 543 -1 O GLU B 538 N SER B 357 SHEET 3 F 7 LYS B 506 THR B 513 -1 N PHE B 510 O PHE B 543 SHEET 4 F 7 LYS B 495 PRO B 500 -1 N TYR B 497 O LEU B 511 SHEET 5 F 7 VAL B 394 GLN B 397 -1 N GLN B 397 O THR B 496 SHEET 6 F 7 LEU B 437 ILE B 440 1 O ILE B 440 N GLY B 396 SHEET 7 F 7 PHE B 477 HIS B 478 1 O HIS B 478 N LEU B 439 SHEET 1 G 5 TYR B 353 SER B 357 0 SHEET 2 G 5 GLU B 538 PHE B 543 -1 O GLU B 538 N SER B 357 SHEET 3 G 5 LYS B 506 THR B 513 -1 N PHE B 510 O PHE B 543 SHEET 4 G 5 PHE B 553 VAL B 555 -1 O PHE B 553 N ILE B 507 SHEET 5 G 5 THR B 569 PHE B 570 1 O PHE B 570 N LYS B 554 SHEET 1 H 3 GLY B 360 PHE B 362 0 SHEET 2 H 3 GLN B 531 ILE B 534 -1 O LEU B 532 N PHE B 362 SHEET 3 H 3 ALA B 524 GLU B 526 -1 N GLU B 526 O GLN B 531 LINK O3' DT D 806 V VO4 A 699 1555 1555 1.78 LINK O3' DT F 806 V VO4 B 699 1555 1555 1.75 LINK NE2 HIS A 263 V VO4 A 699 1555 1555 2.04 LINK V VO4 A 699 OH TYR C 723 1555 1555 1.99 LINK NE2 HIS B 263 V VO4 B 699 1555 1555 2.17 CISPEP 1 LEU A 576 PRO A 577 0 -7.35 CISPEP 2 LEU B 576 PRO B 577 0 -5.43 SITE 1 AC1 9 HIS A 263 LYS A 265 ASN A 283 HIS A 493 SITE 2 AC1 9 LYS A 495 ASN A 516 HOH A 728 TYR C 723 SITE 3 AC1 9 DT D 806 SITE 1 AC2 8 TYR B 204 HIS B 263 LYS B 265 ASN B 283 SITE 2 AC2 8 HIS B 493 LYS B 495 ASN B 516 DT F 806 CRYST1 49.803 104.719 193.924 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020079 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005157 0.00000