HEADER LYASE 17-SEP-03 1O5H TITLE CRYSTAL STRUCTURE OF FORMIMINOTETRAHYDROFOLATE CYCLODEAMINASE (TM1560) TITLE 2 FROM THERMOTOGA MARITIMA AT 2.80 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: FORMIMINOTETRAHYDROFOLATE CYCLODEAMINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 4.3.1.4; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: TM1560; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM1560, FORMIMINOTETRAHYDROFOLATE CYCLODEAMINASE, STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PSI, PROTEIN STRUCTURE INITIATIVE, JOINT CENTER FOR KEYWDS 3 STRUCTURAL GENOMICS, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 10 25-JAN-23 1O5H 1 SEQADV LINK REVDAT 9 18-JUL-18 1O5H 1 REMARK REVDAT 8 13-JUL-11 1O5H 1 VERSN REVDAT 7 24-FEB-09 1O5H 1 VERSN REVDAT 6 20-SEP-05 1O5H 1 JRNL REVDAT 5 05-APR-05 1O5H 1 JRNL REMARK REVDAT 4 28-JAN-05 1O5H 1 JRNL REVDAT 3 18-JAN-05 1O5H 1 AUTHOR KEYWDS REMARK REVDAT 2 10-AUG-04 1O5H 1 TITLE JRNL HEADER KEYWDS REVDAT 2 2 1 COMPND REVDAT 1 30-SEP-03 1O5H 0 JRNL AUTH Q.XU,R.SCHWARZENBACHER,D.MCMULLAN,P.ABDUBEK,E.AMBING, JRNL AUTH 2 T.BIORAC,J.M.CANAVES,H.J.CHIU,X.DAI,A.M.DEACON,M.DIDONATO, JRNL AUTH 3 M.A.ELSLIGER,A.GODZIK,C.GRITTINI,S.K.GRZECHNIK,E.HAMPTON, JRNL AUTH 4 M.HORNSBY,L.JAROSZEWSKI,H.E.KLOCK,E.KOESEMA,A.KREUSCH, JRNL AUTH 5 P.KUHN,S.A.LESLEY,I.LEVIN,M.D.MILLER,A.MORSE,K.MOY,J.OUYANG, JRNL AUTH 6 R.PAGE,K.QUIJANO,R.REYES,A.ROBB,E.SIMS,G.SPRAGGON, JRNL AUTH 7 R.C.STEVENS,H.VAN DEN BEDEM,J.VELASQUEZ,J.VINCENT, JRNL AUTH 8 F.VON DELFT,X.WANG,B.WEST,A.WHITE,G.WOLF,O.ZAGNITKO, JRNL AUTH 9 K.O.HODGSON,J.WOOLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF A FORMIMINOTETRAHYDROFOLATE JRNL TITL 2 CYCLODEAMINASE (TM1560) FROM THERMOTOGA MARITIMA AT 2.80 A JRNL TITL 3 RESOLUTION REVEALS A NEW FOLD JRNL REF PROTEINS V. 58 976 2005 JRNL REFN ISSN 0887-3585 JRNL PMID 15651027 JRNL DOI 10.1002/PROT.20364 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 11576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 597 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 644 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.5110 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3045 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 64.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.68000 REMARK 3 B22 (A**2) : 5.01000 REMARK 3 B33 (A**2) : -6.69000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.411 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.273 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 30.538 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.891 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3086 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4148 ; 1.458 ; 1.972 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 396 ; 4.377 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 141 ;40.805 ;26.170 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;19.746 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.572 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 473 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2282 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1659 ; 0.253 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 117 ; 0.107 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 27 ; 0.187 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 3 ; 0.155 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2024 ; 2.763 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3147 ; 3.619 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1161 ; 7.717 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1001 ;11.859 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 5 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 2 A 87 1 REMARK 3 1 B 2 B 87 1 REMARK 3 2 A 88 A 88 3 REMARK 3 2 B 88 B 88 3 REMARK 3 3 A 89 A 176 1 REMARK 3 3 B 89 B 176 1 REMARK 3 4 A 177 A 177 3 REMARK 3 4 B 177 B 177 3 REMARK 3 5 A 178 A 201 1 REMARK 3 5 B 178 B 199 1 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1489 ; 0.07 ; 0.05 REMARK 3 LOOSE POSITIONAL 1 A (A): 9 ; 1.38 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 1489 ; 5.57 ; 10.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 9 ; 11.05 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): 26.3960 44.0960 52.6910 REMARK 3 T TENSOR REMARK 3 T11: -0.0023 T22: 0.3851 REMARK 3 T33: -0.0537 T12: -0.0889 REMARK 3 T13: 0.0468 T23: -0.0340 REMARK 3 L TENSOR REMARK 3 L11: 2.5198 L22: 2.4528 REMARK 3 L33: 2.1519 L12: -0.5971 REMARK 3 L13: 1.2279 L23: -0.1777 REMARK 3 S TENSOR REMARK 3 S11: 0.1312 S12: -0.4080 S13: -0.1461 REMARK 3 S21: -0.1644 S22: -0.1810 S23: 0.2903 REMARK 3 S31: 0.2768 S32: -1.0419 S33: 0.0498 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 199 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2160 36.3750 54.4130 REMARK 3 T TENSOR REMARK 3 T11: 0.1621 T22: 0.0049 REMARK 3 T33: 0.0106 T12: -0.0024 REMARK 3 T13: -0.0320 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 1.4464 L22: 0.9109 REMARK 3 L33: 5.3573 L12: -0.3076 REMARK 3 L13: 0.0329 L23: 0.1594 REMARK 3 S TENSOR REMARK 3 S11: 0.0788 S12: -0.0276 S13: -0.1665 REMARK 3 S21: 0.0054 S22: 0.0378 S23: -0.0453 REMARK 3 S31: 0.4903 S32: 0.1366 S33: -0.1167 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. THE CONFORMATION OF RESIDUES 20-22 REMARK 3 (P-T-P) IS SUSPECT, BEING POORLY DEFINED IN EXPERIMENTAL MAPS REMARK 3 AND WITH RESIDUAL DIFFERENCE DENSITY IN THE REFINED STRUCTURE, REMARK 3 AS WELL AS UNUSUAL PRO PUCKERING PHASES AFTER 2. RESIDUES 88-98 REMARK 3 IN SUBUNIT ARE POORLY ORDERED IN SUBUNIT A AND DEVIATE REMARK 3 CONSIDERABLY FROM SUBUNIT B; NCS RESTRAINTS WERE KEPT TIGHT HERE, REMARK 3 HOWEVER, SINCE LOOSE RESTRAINTS DID NOT IMPROVE RFREE OR THE REMARK 3 GEOMETRY. 3. THE TWO C-TERMINAL RESIDUES OF SUBUNIT B WERE REMARK 3 DISORDERED OMITTED IN THE MODEL. REMARK 4 REMARK 4 1O5H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-03. REMARK 100 THE DEPOSITION ID IS D_1000001827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978998 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 5.0), CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13727 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10800 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 38.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59100 REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5% PEG-6000, 0.1M CITRIC ACID PH 5.0, REMARK 280 VAPOR DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.35200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.62250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.93750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.62250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.35200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.93750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 LYS A 202 REMARK 465 MSE B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MSE B 1 REMARK 465 SER B 200 REMARK 465 SER B 201 REMARK 465 LYS B 202 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 5 NE CZ NH1 NH2 REMARK 470 LYS A 19 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 LYS A 89 CG CD CE NZ REMARK 470 TYR A 91 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 92 CG CD CE NZ REMARK 470 LYS A 170 CD CE NZ REMARK 470 LYS A 192 CD CE NZ REMARK 470 ARG B 5 NE CZ NH1 NH2 REMARK 470 LYS B 19 CG CD CE NZ REMARK 470 LYS B 48 CG CD CE NZ REMARK 470 LYS B 50 CG CD CE NZ REMARK 470 GLU B 64 CD OE1 OE2 REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 LYS B 192 CD CE NZ REMARK 470 GLU B 195 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 111 CB - CG - OD2 ANGL. DEV. = 6.6 DEGREES REMARK 500 ASP A 143 CB - CG - OD2 ANGL. DEV. = 6.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 18 41.36 -79.93 REMARK 500 LYS A 89 35.88 -79.10 REMARK 500 ALA A 90 -11.43 -152.91 REMARK 500 ASP A 165 99.70 -60.70 REMARK 500 ARG B 18 37.77 -76.48 REMARK 500 LYS B 89 32.78 -73.46 REMARK 500 ALA B 90 -8.76 -152.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 283417 RELATED DB: TARGETDB DBREF 1O5H A 1 202 UNP Q9X1P6 Q9X1P6_THEMA 1 202 DBREF 1O5H B 1 202 UNP Q9X1P6 Q9X1P6_THEMA 1 202 SEQADV 1O5H MSE A -11 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H GLY A -10 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H SER A -9 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H ASP A -8 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H LYS A -7 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H ILE A -6 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A -5 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A -4 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A -3 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A -2 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A -1 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS A 0 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H MSE A 1 UNP Q9X1P6 MET 1 MODIFIED RESIDUE SEQADV 1O5H MSE A 14 UNP Q9X1P6 MET 14 MODIFIED RESIDUE SEQADV 1O5H MSE A 34 UNP Q9X1P6 MET 34 MODIFIED RESIDUE SEQADV 1O5H MSE A 41 UNP Q9X1P6 MET 41 MODIFIED RESIDUE SEQADV 1O5H MSE A 59 UNP Q9X1P6 MET 59 MODIFIED RESIDUE SEQADV 1O5H MSE A 66 UNP Q9X1P6 MET 66 MODIFIED RESIDUE SEQADV 1O5H MSE A 81 UNP Q9X1P6 MET 81 MODIFIED RESIDUE SEQADV 1O5H MSE A 88 UNP Q9X1P6 MET 88 MODIFIED RESIDUE SEQADV 1O5H MSE A 110 UNP Q9X1P6 MET 110 MODIFIED RESIDUE SEQADV 1O5H MSE A 116 UNP Q9X1P6 MET 116 MODIFIED RESIDUE SEQADV 1O5H MSE A 172 UNP Q9X1P6 MET 172 MODIFIED RESIDUE SEQADV 1O5H MSE A 193 UNP Q9X1P6 MET 193 MODIFIED RESIDUE SEQADV 1O5H MSE B -11 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H GLY B -10 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H SER B -9 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H ASP B -8 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H LYS B -7 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H ILE B -6 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B -5 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B -4 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B -3 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B -2 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B -1 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H HIS B 0 UNP Q9X1P6 EXPRESSION TAG SEQADV 1O5H MSE B 1 UNP Q9X1P6 MET 1 MODIFIED RESIDUE SEQADV 1O5H MSE B 14 UNP Q9X1P6 MET 14 MODIFIED RESIDUE SEQADV 1O5H MSE B 34 UNP Q9X1P6 MET 34 MODIFIED RESIDUE SEQADV 1O5H MSE B 41 UNP Q9X1P6 MET 41 MODIFIED RESIDUE SEQADV 1O5H MSE B 59 UNP Q9X1P6 MET 59 MODIFIED RESIDUE SEQADV 1O5H MSE B 66 UNP Q9X1P6 MET 66 MODIFIED RESIDUE SEQADV 1O5H MSE B 81 UNP Q9X1P6 MET 81 MODIFIED RESIDUE SEQADV 1O5H MSE B 88 UNP Q9X1P6 MET 88 MODIFIED RESIDUE SEQADV 1O5H MSE B 110 UNP Q9X1P6 MET 110 MODIFIED RESIDUE SEQADV 1O5H MSE B 116 UNP Q9X1P6 MET 116 MODIFIED RESIDUE SEQADV 1O5H MSE B 172 UNP Q9X1P6 MET 172 MODIFIED RESIDUE SEQADV 1O5H MSE B 193 UNP Q9X1P6 MET 193 MODIFIED RESIDUE SEQRES 1 A 214 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 214 GLU VAL GLU ARG LEU SER LEU LYS GLU PHE CYS ASP MSE SEQRES 3 A 214 VAL ALA GLU ARG LYS PRO THR PRO GLY GLY GLY ALA VAL SEQRES 4 A 214 GLY SER VAL VAL GLY ALA MSE ALA CYS ALA LEU ALA GLU SEQRES 5 A 214 MSE VAL ALA ASN PHE THR ARG LYS LYS LYS GLY TYR GLU SEQRES 6 A 214 ASP VAL GLU PRO GLU MSE GLU ARG ILE VAL GLU ALA MSE SEQRES 7 A 214 GLU GLU ALA ARG LEU LYS LEU PHE ASP LEU ALA LYS LYS SEQRES 8 A 214 ASP MSE GLU ALA PHE GLU LYS VAL MSE LYS ALA TYR LYS SEQRES 9 A 214 SER SER GLU GLY GLU LEU GLN ASN ALA LEU LYS GLU ALA SEQRES 10 A 214 ALA SER VAL PRO MSE ASP VAL ILE ARG VAL MSE LYS ASP SEQRES 11 A 214 LEU ALA HIS GLU LEU GLU LYS LEU ALA GLU PHE GLY ASN SEQRES 12 A 214 LYS ASN LEU ALA SER ASP THR LEU ASN ALA ALA ASP LEU SEQRES 13 A 214 CYS HIS ALA VAL PHE GLN VAL GLU LYS VAL ASN VAL LEU SEQRES 14 A 214 ILE ASN LEU LYS GLU ILE SER ASP GLU THR PHE ARG LYS SEQRES 15 A 214 ASN MSE LEU GLU GLU LEU GLU GLU GLN GLU ALA GLN ILE SEQRES 16 A 214 GLU GLY CYS TYR GLN ARG VAL LYS LYS MSE LEU GLU GLY SEQRES 17 A 214 ILE VAL TRP SER SER LYS SEQRES 1 B 214 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 B 214 GLU VAL GLU ARG LEU SER LEU LYS GLU PHE CYS ASP MSE SEQRES 3 B 214 VAL ALA GLU ARG LYS PRO THR PRO GLY GLY GLY ALA VAL SEQRES 4 B 214 GLY SER VAL VAL GLY ALA MSE ALA CYS ALA LEU ALA GLU SEQRES 5 B 214 MSE VAL ALA ASN PHE THR ARG LYS LYS LYS GLY TYR GLU SEQRES 6 B 214 ASP VAL GLU PRO GLU MSE GLU ARG ILE VAL GLU ALA MSE SEQRES 7 B 214 GLU GLU ALA ARG LEU LYS LEU PHE ASP LEU ALA LYS LYS SEQRES 8 B 214 ASP MSE GLU ALA PHE GLU LYS VAL MSE LYS ALA TYR LYS SEQRES 9 B 214 SER SER GLU GLY GLU LEU GLN ASN ALA LEU LYS GLU ALA SEQRES 10 B 214 ALA SER VAL PRO MSE ASP VAL ILE ARG VAL MSE LYS ASP SEQRES 11 B 214 LEU ALA HIS GLU LEU GLU LYS LEU ALA GLU PHE GLY ASN SEQRES 12 B 214 LYS ASN LEU ALA SER ASP THR LEU ASN ALA ALA ASP LEU SEQRES 13 B 214 CYS HIS ALA VAL PHE GLN VAL GLU LYS VAL ASN VAL LEU SEQRES 14 B 214 ILE ASN LEU LYS GLU ILE SER ASP GLU THR PHE ARG LYS SEQRES 15 B 214 ASN MSE LEU GLU GLU LEU GLU GLU GLN GLU ALA GLN ILE SEQRES 16 B 214 GLU GLY CYS TYR GLN ARG VAL LYS LYS MSE LEU GLU GLY SEQRES 17 B 214 ILE VAL TRP SER SER LYS MODRES 1O5H MSE A 14 MET SELENOMETHIONINE MODRES 1O5H MSE A 34 MET SELENOMETHIONINE MODRES 1O5H MSE A 41 MET SELENOMETHIONINE MODRES 1O5H MSE A 59 MET SELENOMETHIONINE MODRES 1O5H MSE A 66 MET SELENOMETHIONINE MODRES 1O5H MSE A 81 MET SELENOMETHIONINE MODRES 1O5H MSE A 88 MET SELENOMETHIONINE MODRES 1O5H MSE A 110 MET SELENOMETHIONINE MODRES 1O5H MSE A 116 MET SELENOMETHIONINE MODRES 1O5H MSE A 172 MET SELENOMETHIONINE MODRES 1O5H MSE A 193 MET SELENOMETHIONINE MODRES 1O5H MSE B 14 MET SELENOMETHIONINE MODRES 1O5H MSE B 34 MET SELENOMETHIONINE MODRES 1O5H MSE B 41 MET SELENOMETHIONINE MODRES 1O5H MSE B 59 MET SELENOMETHIONINE MODRES 1O5H MSE B 66 MET SELENOMETHIONINE MODRES 1O5H MSE B 81 MET SELENOMETHIONINE MODRES 1O5H MSE B 88 MET SELENOMETHIONINE MODRES 1O5H MSE B 110 MET SELENOMETHIONINE MODRES 1O5H MSE B 116 MET SELENOMETHIONINE MODRES 1O5H MSE B 172 MET SELENOMETHIONINE MODRES 1O5H MSE B 193 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 34 8 HET MSE A 41 8 HET MSE A 59 8 HET MSE A 66 8 HET MSE A 81 8 HET MSE A 88 8 HET MSE A 110 8 HET MSE A 116 8 HET MSE A 172 8 HET MSE A 193 8 HET MSE B 14 8 HET MSE B 34 8 HET MSE B 41 8 HET MSE B 59 8 HET MSE B 66 8 HET MSE B 81 8 HET MSE B 88 8 HET MSE B 110 8 HET MSE B 116 8 HET MSE B 172 8 HET MSE B 193 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 22(C5 H11 N O2 SE) HELIX 1 1 SER A 7 GLU A 17 1 11 HELIX 2 2 GLY A 23 PHE A 45 1 23 HELIX 3 3 TYR A 52 ASP A 54 5 3 HELIX 4 4 VAL A 55 LYS A 89 1 35 HELIX 5 5 SER A 94 GLY A 130 1 37 HELIX 6 6 ASN A 131 ASN A 133 5 3 HELIX 7 7 LEU A 134 LYS A 161 1 28 HELIX 8 8 ASP A 165 GLU A 195 1 31 HELIX 9 9 GLY A 196 TRP A 199 5 4 HELIX 10 10 GLU B 2 LEU B 6 5 5 HELIX 11 11 SER B 7 GLU B 17 1 11 HELIX 12 12 GLY B 23 PHE B 45 1 23 HELIX 13 13 TYR B 52 ASP B 54 5 3 HELIX 14 14 VAL B 55 LYS B 89 1 35 HELIX 15 15 SER B 94 GLY B 130 1 37 HELIX 16 16 ASN B 131 ASN B 133 5 3 HELIX 17 17 LEU B 134 LYS B 161 1 28 HELIX 18 18 ASP B 165 GLU B 195 1 31 HELIX 19 19 GLY B 196 TRP B 199 5 4 LINK C ASP A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N VAL A 15 1555 1555 1.33 LINK C ALA A 33 N MSE A 34 1555 1555 1.32 LINK C MSE A 34 N ALA A 35 1555 1555 1.33 LINK C GLU A 40 N MSE A 41 1555 1555 1.34 LINK C MSE A 41 N VAL A 42 1555 1555 1.32 LINK C GLU A 58 N MSE A 59 1555 1555 1.33 LINK C MSE A 59 N GLU A 60 1555 1555 1.32 LINK C ALA A 65 N MSE A 66 1555 1555 1.33 LINK C MSE A 66 N GLU A 67 1555 1555 1.32 LINK C ASP A 80 N MSE A 81 1555 1555 1.33 LINK C MSE A 81 N GLU A 82 1555 1555 1.32 LINK C VAL A 87 N MSE A 88 1555 1555 1.34 LINK C MSE A 88 N LYS A 89 1555 1555 1.34 LINK C PRO A 109 N MSE A 110 1555 1555 1.33 LINK C MSE A 110 N ASP A 111 1555 1555 1.33 LINK C VAL A 115 N MSE A 116 1555 1555 1.32 LINK C MSE A 116 N LYS A 117 1555 1555 1.33 LINK C ASN A 171 N MSE A 172 1555 1555 1.32 LINK C MSE A 172 N LEU A 173 1555 1555 1.34 LINK C LYS A 192 N MSE A 193 1555 1555 1.33 LINK C MSE A 193 N LEU A 194 1555 1555 1.32 LINK C ASP B 13 N MSE B 14 1555 1555 1.33 LINK C MSE B 14 N VAL B 15 1555 1555 1.32 LINK C ALA B 33 N MSE B 34 1555 1555 1.34 LINK C MSE B 34 N ALA B 35 1555 1555 1.33 LINK C GLU B 40 N MSE B 41 1555 1555 1.33 LINK C MSE B 41 N VAL B 42 1555 1555 1.33 LINK C GLU B 58 N MSE B 59 1555 1555 1.32 LINK C MSE B 59 N GLU B 60 1555 1555 1.33 LINK C ALA B 65 N MSE B 66 1555 1555 1.33 LINK C MSE B 66 N GLU B 67 1555 1555 1.34 LINK C ASP B 80 N MSE B 81 1555 1555 1.33 LINK C MSE B 81 N GLU B 82 1555 1555 1.32 LINK C VAL B 87 N MSE B 88 1555 1555 1.33 LINK C MSE B 88 N LYS B 89 1555 1555 1.33 LINK C PRO B 109 N MSE B 110 1555 1555 1.33 LINK C MSE B 110 N ASP B 111 1555 1555 1.32 LINK C VAL B 115 N MSE B 116 1555 1555 1.33 LINK C MSE B 116 N LYS B 117 1555 1555 1.35 LINK C ASN B 171 N MSE B 172 1555 1555 1.33 LINK C MSE B 172 N LEU B 173 1555 1555 1.33 LINK C LYS B 192 N MSE B 193 1555 1555 1.32 LINK C MSE B 193 N LEU B 194 1555 1555 1.32 CRYST1 56.704 71.875 119.245 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017635 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013913 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008386 0.00000