data_1ONL # _entry.id 1ONL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ONL pdb_00001onl 10.2210/pdb1onl/pdb RCSB RCSB018475 ? ? WWPDB D_1000018475 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id ttk003000357.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ONL _pdbx_database_status.recvd_initial_deposition_date 2003-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nakai, T.' 1 'Ishijima, J.' 2 'Masui, R.' 3 'Kuramitsu, S.' 4 'Kamiya, N.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title ;Structure of Thermus thermophilus HB8 H-protein of the glycine-cleavage system, resolved by a six-dimensional molecular-replacement method. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 59 _citation.page_first 1610 _citation.page_last 1618 _citation.year 2003 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12925792 _citation.pdbx_database_id_DOI 10.1107/S0907444903014975 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nakai, T.' 1 ? primary 'Ishijima, J.' 2 ? primary 'Masui, R.' 3 ? primary 'Kuramitsu, S.' 4 ? primary 'Kamiya, N.' 5 ? # _cell.entry_id 1ONL _cell.length_a 55.775 _cell.length_b 55.775 _cell.length_c 191.190 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ONL _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'glycine cleavage system H protein' 14093.672 3 ? ? ? ? 2 water nat water 18.015 115 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MDIPKDRFYTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVN LALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESEA ; _entity_poly.pdbx_seq_one_letter_code_can ;MDIPKDRFYTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVN LALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESEA ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ttk003000357.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 ILE n 1 4 PRO n 1 5 LYS n 1 6 ASP n 1 7 ARG n 1 8 PHE n 1 9 TYR n 1 10 THR n 1 11 LYS n 1 12 THR n 1 13 HIS n 1 14 GLU n 1 15 TRP n 1 16 ALA n 1 17 LEU n 1 18 PRO n 1 19 GLU n 1 20 GLY n 1 21 ASP n 1 22 THR n 1 23 VAL n 1 24 LEU n 1 25 VAL n 1 26 GLY n 1 27 ILE n 1 28 THR n 1 29 ASP n 1 30 TYR n 1 31 ALA n 1 32 GLN n 1 33 ASP n 1 34 ALA n 1 35 LEU n 1 36 GLY n 1 37 ASP n 1 38 VAL n 1 39 VAL n 1 40 TYR n 1 41 VAL n 1 42 GLU n 1 43 LEU n 1 44 PRO n 1 45 GLU n 1 46 VAL n 1 47 GLY n 1 48 ARG n 1 49 VAL n 1 50 VAL n 1 51 GLU n 1 52 LYS n 1 53 GLY n 1 54 GLU n 1 55 ALA n 1 56 VAL n 1 57 ALA n 1 58 VAL n 1 59 VAL n 1 60 GLU n 1 61 SER n 1 62 VAL n 1 63 LYS n 1 64 THR n 1 65 ALA n 1 66 SER n 1 67 ASP n 1 68 ILE n 1 69 TYR n 1 70 ALA n 1 71 PRO n 1 72 VAL n 1 73 ALA n 1 74 GLY n 1 75 GLU n 1 76 ILE n 1 77 VAL n 1 78 GLU n 1 79 VAL n 1 80 ASN n 1 81 LEU n 1 82 ALA n 1 83 LEU n 1 84 GLU n 1 85 LYS n 1 86 THR n 1 87 PRO n 1 88 GLU n 1 89 LEU n 1 90 VAL n 1 91 ASN n 1 92 GLN n 1 93 ASP n 1 94 PRO n 1 95 TYR n 1 96 GLY n 1 97 GLU n 1 98 GLY n 1 99 TRP n 1 100 ILE n 1 101 PHE n 1 102 ARG n 1 103 LEU n 1 104 LYS n 1 105 PRO n 1 106 ARG n 1 107 ASP n 1 108 MET n 1 109 GLY n 1 110 ASP n 1 111 LEU n 1 112 ASP n 1 113 GLU n 1 114 LEU n 1 115 LEU n 1 116 ASP n 1 117 ALA n 1 118 GLY n 1 119 GLY n 1 120 TYR n 1 121 GLN n 1 122 GLU n 1 123 VAL n 1 124 LEU n 1 125 GLU n 1 126 SER n 1 127 GLU n 1 128 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermus _entity_src_gen.pdbx_gene_src_gene GcvH _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermus thermophilus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 274 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET11a-gcvH _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code P83697_THETH _struct_ref.pdbx_db_accession P83697 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ONL A 1 ? 128 ? P83697 1 ? 128 ? 1 128 2 1 1ONL B 1 ? 128 ? P83697 1 ? 128 ? 1 128 3 1 1ONL C 1 ? 128 ? P83697 1 ? 128 ? 1 128 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ONL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_percent_sol 37.94 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.3 _exptl_crystal_grow.pdbx_details 'ammonium phosphate, glycerol, pH 4.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2001-06-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator Si111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL44B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL44B2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00 # _reflns.entry_id 1ONL _reflns.observed_criterion_sigma_I 1.01 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.5 _reflns.number_obs 11730 _reflns.number_all 11773 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.109 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.7 _reflns.B_iso_Wilson_estimate 23.3 _reflns.pdbx_redundancy 11.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.58 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.355 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1ONL _refine.ls_number_reflns_obs 11137 _refine.ls_number_reflns_all 11689 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 220770.62 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.ls_d_res_low 48.30 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 95.8 _refine.ls_R_factor_obs 0.186 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.186 _refine.ls_R_factor_R_free 0.253 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 1155 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 27.1 _refine.aniso_B[1][1] 2.70 _refine.aniso_B[2][2] 2.70 _refine.aniso_B[3][3] -5.40 _refine.aniso_B[1][2] 5.83 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.357413 _refine.solvent_model_param_bsol 36.8901 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1HPC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ONL _refine_analyze.Luzzati_coordinate_error_obs 0.25 _refine_analyze.Luzzati_sigma_a_obs 0.27 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.40 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2955 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 115 _refine_hist.number_atoms_total 3070 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 48.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 24.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.74 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.25 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.04 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 1.94 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 2.86 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 1609 _refine_ls_shell.R_factor_R_work 0.243 _refine_ls_shell.percent_reflns_obs 92.5 _refine_ls_shell.R_factor_R_free 0.316 _refine_ls_shell.R_factor_R_free_error 0.023 _refine_ls_shell.percent_reflns_R_free 10.1 _refine_ls_shell.number_reflns_R_free 181 _refine_ls_shell.number_reflns_obs 1609 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM ? 'X-RAY DIFFRACTION' # _struct.entry_id 1ONL _struct.title 'Crystal structure of Thermus thermophilus HB8 H-protein of the glycine cleavage system' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ONL _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.text 'hybrid barrel-sandwich structure, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, oxidoreductase' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? 3 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 28 ? GLY A 36 ? THR A 28 GLY A 36 1 ? 9 HELX_P HELX_P2 2 LEU A 81 ? THR A 86 ? LEU A 81 THR A 86 1 ? 6 HELX_P HELX_P3 3 GLU A 88 ? ASP A 93 ? GLU A 88 ASP A 93 1 ? 6 HELX_P HELX_P4 4 ASP A 107 ? LEU A 114 ? ASP A 107 LEU A 114 5 ? 8 HELX_P HELX_P5 5 ASP A 116 ? GLU A 127 ? ASP A 116 GLU A 127 1 ? 12 HELX_P HELX_P6 6 THR B 28 ? GLY B 36 ? THR B 28 GLY B 36 1 ? 9 HELX_P HELX_P7 7 LEU B 81 ? THR B 86 ? LEU B 81 THR B 86 1 ? 6 HELX_P HELX_P8 8 GLU B 88 ? ASP B 93 ? GLU B 88 ASP B 93 1 ? 6 HELX_P HELX_P9 9 ASP B 107 ? LEU B 114 ? ASP B 107 LEU B 114 5 ? 8 HELX_P HELX_P10 10 ASP B 116 ? SER B 126 ? ASP B 116 SER B 126 1 ? 11 HELX_P HELX_P11 11 THR C 28 ? GLY C 36 ? THR C 28 GLY C 36 1 ? 9 HELX_P HELX_P12 12 LEU C 81 ? THR C 86 ? LEU C 81 THR C 86 1 ? 6 HELX_P HELX_P13 13 GLU C 88 ? ASP C 93 ? GLU C 88 ASP C 93 1 ? 6 HELX_P HELX_P14 14 ASP C 107 ? LEU C 114 ? ASP C 107 LEU C 114 5 ? 8 HELX_P HELX_P15 15 ASP C 116 ? GLU C 127 ? ASP C 116 GLU C 127 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 6 ? D ? 3 ? E ? 6 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 8 ? TYR A 9 ? PHE A 8 TYR A 9 A 2 GLU A 14 ? GLU A 19 ? GLU A 14 GLU A 19 A 3 THR A 22 ? ILE A 27 ? THR A 22 ILE A 27 A 4 PHE A 101 ? PRO A 105 ? PHE A 101 PRO A 105 A 5 GLY A 74 ? VAL A 79 ? GLY A 74 VAL A 79 A 6 VAL A 49 ? VAL A 50 ? VAL A 49 VAL A 50 B 1 VAL A 38 ? GLU A 42 ? VAL A 38 GLU A 42 B 2 ALA A 55 ? SER A 61 ? ALA A 55 SER A 61 B 3 ALA A 65 ? TYR A 69 ? ALA A 65 TYR A 69 C 1 PHE B 8 ? TYR B 9 ? PHE B 8 TYR B 9 C 2 GLU B 14 ? GLU B 19 ? GLU B 14 GLU B 19 C 3 THR B 22 ? ILE B 27 ? THR B 22 ILE B 27 C 4 PHE B 101 ? PRO B 105 ? PHE B 101 PRO B 105 C 5 GLY B 74 ? VAL B 79 ? GLY B 74 VAL B 79 C 6 VAL B 49 ? VAL B 50 ? VAL B 49 VAL B 50 D 1 VAL B 38 ? GLU B 42 ? VAL B 38 GLU B 42 D 2 ALA B 55 ? SER B 61 ? ALA B 55 SER B 61 D 3 ALA B 65 ? TYR B 69 ? ALA B 65 TYR B 69 E 1 PHE C 8 ? TYR C 9 ? PHE C 8 TYR C 9 E 2 GLU C 14 ? GLU C 19 ? GLU C 14 GLU C 19 E 3 THR C 22 ? ILE C 27 ? THR C 22 ILE C 27 E 4 PHE C 101 ? PRO C 105 ? PHE C 101 PRO C 105 E 5 GLY C 74 ? VAL C 79 ? GLY C 74 VAL C 79 E 6 VAL C 49 ? VAL C 50 ? VAL C 49 VAL C 50 F 1 VAL C 38 ? GLU C 42 ? VAL C 38 GLU C 42 F 2 ALA C 55 ? SER C 61 ? ALA C 55 SER C 61 F 3 ALA C 65 ? TYR C 69 ? ALA C 65 TYR C 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 8 ? N PHE A 8 O ALA A 16 ? O ALA A 16 A 2 3 N GLU A 19 ? N GLU A 19 O THR A 22 ? O THR A 22 A 3 4 N VAL A 23 ? N VAL A 23 O LEU A 103 ? O LEU A 103 A 4 5 O LYS A 104 ? O LYS A 104 N GLU A 75 ? N GLU A 75 A 5 6 O GLY A 74 ? O GLY A 74 N VAL A 50 ? N VAL A 50 B 1 2 N GLU A 42 ? N GLU A 42 O VAL A 58 ? O VAL A 58 B 2 3 N ALA A 57 ? N ALA A 57 O ILE A 68 ? O ILE A 68 C 1 2 N PHE B 8 ? N PHE B 8 O ALA B 16 ? O ALA B 16 C 2 3 N LEU B 17 ? N LEU B 17 O LEU B 24 ? O LEU B 24 C 3 4 N VAL B 23 ? N VAL B 23 O LEU B 103 ? O LEU B 103 C 4 5 O LYS B 104 ? O LYS B 104 N GLU B 75 ? N GLU B 75 C 5 6 O GLY B 74 ? O GLY B 74 N VAL B 50 ? N VAL B 50 D 1 2 N GLU B 42 ? N GLU B 42 O VAL B 58 ? O VAL B 58 D 2 3 N ALA B 57 ? N ALA B 57 O ILE B 68 ? O ILE B 68 E 1 2 N PHE C 8 ? N PHE C 8 O ALA C 16 ? O ALA C 16 E 2 3 N TRP C 15 ? N TRP C 15 O GLY C 26 ? O GLY C 26 E 3 4 N VAL C 25 ? N VAL C 25 O PHE C 101 ? O PHE C 101 E 4 5 O ARG C 102 ? O ARG C 102 N GLU C 78 ? N GLU C 78 E 5 6 O GLY C 74 ? O GLY C 74 N VAL C 50 ? N VAL C 50 F 1 2 N TYR C 40 ? N TYR C 40 O GLU C 60 ? O GLU C 60 F 2 3 N ALA C 57 ? N ALA C 57 O ILE C 68 ? O ILE C 68 # _database_PDB_matrix.entry_id 1ONL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ONL _atom_sites.fract_transf_matrix[1][1] 0.017929 _atom_sites.fract_transf_matrix[1][2] 0.010351 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020703 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005230 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 TRP 15 15 15 TRP TRP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 PRO 18 18 18 PRO PRO A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ILE 27 27 27 ILE ILE A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 GLN 32 32 32 GLN GLN A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 PRO 44 44 44 PRO PRO A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 GLU 84 84 84 GLU GLU A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 PRO 87 87 87 PRO PRO A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLU 97 97 97 GLU GLU A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 TRP 99 99 99 TRP TRP A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 PHE 101 101 101 PHE PHE A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 ARG 106 106 106 ARG ARG A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 MET 108 108 108 MET MET A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 LEU 115 115 115 LEU LEU A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 GLU 125 125 125 GLU GLU A . n A 1 126 SER 126 126 126 SER SER A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ALA 128 128 128 ALA ALA A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ASP 2 2 2 ASP ASP B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 LYS 5 5 5 LYS LYS B . n B 1 6 ASP 6 6 6 ASP ASP B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 TYR 9 9 9 TYR TYR B . n B 1 10 THR 10 10 10 THR THR B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 HIS 13 13 13 HIS HIS B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 TRP 15 15 15 TRP TRP B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 PRO 18 18 18 PRO PRO B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 ILE 27 27 27 ILE ILE B . n B 1 28 THR 28 28 28 THR THR B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 GLN 32 32 32 GLN GLN B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 ASP 37 37 37 ASP ASP B . n B 1 38 VAL 38 38 38 VAL VAL B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 TYR 40 40 40 TYR TYR B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 PRO 44 44 44 PRO PRO B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 ARG 48 48 48 ARG ARG B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 GLU 60 60 60 GLU GLU B . n B 1 61 SER 61 61 61 SER SER B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 THR 64 64 64 THR THR B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 SER 66 66 66 SER SER B . n B 1 67 ASP 67 67 67 ASP ASP B . n B 1 68 ILE 68 68 68 ILE ILE B . n B 1 69 TYR 69 69 69 TYR TYR B . n B 1 70 ALA 70 70 70 ALA ALA B . n B 1 71 PRO 71 71 71 PRO PRO B . n B 1 72 VAL 72 72 72 VAL VAL B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 ILE 76 76 76 ILE ILE B . n B 1 77 VAL 77 77 77 VAL VAL B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 LEU 81 81 81 LEU LEU B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 GLU 84 84 84 GLU GLU B . n B 1 85 LYS 85 85 85 LYS LYS B . n B 1 86 THR 86 86 86 THR THR B . n B 1 87 PRO 87 87 87 PRO PRO B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 ASN 91 91 91 ASN ASN B . n B 1 92 GLN 92 92 92 GLN GLN B . n B 1 93 ASP 93 93 93 ASP ASP B . n B 1 94 PRO 94 94 94 PRO PRO B . n B 1 95 TYR 95 95 95 TYR TYR B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 GLU 97 97 97 GLU GLU B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 TRP 99 99 99 TRP TRP B . n B 1 100 ILE 100 100 100 ILE ILE B . n B 1 101 PHE 101 101 101 PHE PHE B . n B 1 102 ARG 102 102 102 ARG ARG B . n B 1 103 LEU 103 103 103 LEU LEU B . n B 1 104 LYS 104 104 104 LYS LYS B . n B 1 105 PRO 105 105 105 PRO PRO B . n B 1 106 ARG 106 106 106 ARG ARG B . n B 1 107 ASP 107 107 107 ASP ASP B . n B 1 108 MET 108 108 108 MET MET B . n B 1 109 GLY 109 109 109 GLY GLY B . n B 1 110 ASP 110 110 110 ASP ASP B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 ASP 112 112 112 ASP ASP B . n B 1 113 GLU 113 113 113 GLU GLU B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 LEU 115 115 115 LEU LEU B . n B 1 116 ASP 116 116 116 ASP ASP B . n B 1 117 ALA 117 117 117 ALA ALA B . n B 1 118 GLY 118 118 118 GLY GLY B . n B 1 119 GLY 119 119 119 GLY GLY B . n B 1 120 TYR 120 120 120 TYR TYR B . n B 1 121 GLN 121 121 121 GLN GLN B . n B 1 122 GLU 122 122 122 GLU GLU B . n B 1 123 VAL 123 123 123 VAL VAL B . n B 1 124 LEU 124 124 124 LEU LEU B . n B 1 125 GLU 125 125 125 GLU GLU B . n B 1 126 SER 126 126 126 SER SER B . n B 1 127 GLU 127 127 127 GLU GLU B . n B 1 128 ALA 128 128 128 ALA ALA B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 ASP 2 2 2 ASP ASP C . n C 1 3 ILE 3 3 3 ILE ILE C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 LYS 5 5 5 LYS LYS C . n C 1 6 ASP 6 6 6 ASP ASP C . n C 1 7 ARG 7 7 7 ARG ARG C . n C 1 8 PHE 8 8 8 PHE PHE C . n C 1 9 TYR 9 9 9 TYR TYR C . n C 1 10 THR 10 10 10 THR THR C . n C 1 11 LYS 11 11 11 LYS LYS C . n C 1 12 THR 12 12 12 THR THR C . n C 1 13 HIS 13 13 13 HIS HIS C . n C 1 14 GLU 14 14 14 GLU GLU C . n C 1 15 TRP 15 15 15 TRP TRP C . n C 1 16 ALA 16 16 16 ALA ALA C . n C 1 17 LEU 17 17 17 LEU LEU C . n C 1 18 PRO 18 18 18 PRO PRO C . n C 1 19 GLU 19 19 19 GLU GLU C . n C 1 20 GLY 20 20 20 GLY GLY C . n C 1 21 ASP 21 21 21 ASP ASP C . n C 1 22 THR 22 22 22 THR THR C . n C 1 23 VAL 23 23 23 VAL VAL C . n C 1 24 LEU 24 24 24 LEU LEU C . n C 1 25 VAL 25 25 25 VAL VAL C . n C 1 26 GLY 26 26 26 GLY GLY C . n C 1 27 ILE 27 27 27 ILE ILE C . n C 1 28 THR 28 28 28 THR THR C . n C 1 29 ASP 29 29 29 ASP ASP C . n C 1 30 TYR 30 30 30 TYR TYR C . n C 1 31 ALA 31 31 31 ALA ALA C . n C 1 32 GLN 32 32 32 GLN GLN C . n C 1 33 ASP 33 33 33 ASP ASP C . n C 1 34 ALA 34 34 34 ALA ALA C . n C 1 35 LEU 35 35 35 LEU LEU C . n C 1 36 GLY 36 36 36 GLY GLY C . n C 1 37 ASP 37 37 37 ASP ASP C . n C 1 38 VAL 38 38 38 VAL VAL C . n C 1 39 VAL 39 39 39 VAL VAL C . n C 1 40 TYR 40 40 40 TYR TYR C . n C 1 41 VAL 41 41 41 VAL VAL C . n C 1 42 GLU 42 42 42 GLU GLU C . n C 1 43 LEU 43 43 43 LEU LEU C . n C 1 44 PRO 44 44 44 PRO PRO C . n C 1 45 GLU 45 45 45 GLU GLU C . n C 1 46 VAL 46 46 46 VAL VAL C . n C 1 47 GLY 47 47 47 GLY GLY C . n C 1 48 ARG 48 48 48 ARG ARG C . n C 1 49 VAL 49 49 49 VAL VAL C . n C 1 50 VAL 50 50 50 VAL VAL C . n C 1 51 GLU 51 51 51 GLU GLU C . n C 1 52 LYS 52 52 52 LYS LYS C . n C 1 53 GLY 53 53 53 GLY GLY C . n C 1 54 GLU 54 54 54 GLU GLU C . n C 1 55 ALA 55 55 55 ALA ALA C . n C 1 56 VAL 56 56 56 VAL VAL C . n C 1 57 ALA 57 57 57 ALA ALA C . n C 1 58 VAL 58 58 58 VAL VAL C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 GLU 60 60 60 GLU GLU C . n C 1 61 SER 61 61 61 SER SER C . n C 1 62 VAL 62 62 62 VAL VAL C . n C 1 63 LYS 63 63 63 LYS LYS C . n C 1 64 THR 64 64 64 THR THR C . n C 1 65 ALA 65 65 65 ALA ALA C . n C 1 66 SER 66 66 66 SER SER C . n C 1 67 ASP 67 67 67 ASP ASP C . n C 1 68 ILE 68 68 68 ILE ILE C . n C 1 69 TYR 69 69 69 TYR TYR C . n C 1 70 ALA 70 70 70 ALA ALA C . n C 1 71 PRO 71 71 71 PRO PRO C . n C 1 72 VAL 72 72 72 VAL VAL C . n C 1 73 ALA 73 73 73 ALA ALA C . n C 1 74 GLY 74 74 74 GLY GLY C . n C 1 75 GLU 75 75 75 GLU GLU C . n C 1 76 ILE 76 76 76 ILE ILE C . n C 1 77 VAL 77 77 77 VAL VAL C . n C 1 78 GLU 78 78 78 GLU GLU C . n C 1 79 VAL 79 79 79 VAL VAL C . n C 1 80 ASN 80 80 80 ASN ASN C . n C 1 81 LEU 81 81 81 LEU LEU C . n C 1 82 ALA 82 82 82 ALA ALA C . n C 1 83 LEU 83 83 83 LEU LEU C . n C 1 84 GLU 84 84 84 GLU GLU C . n C 1 85 LYS 85 85 85 LYS LYS C . n C 1 86 THR 86 86 86 THR THR C . n C 1 87 PRO 87 87 87 PRO PRO C . n C 1 88 GLU 88 88 88 GLU GLU C . n C 1 89 LEU 89 89 89 LEU LEU C . n C 1 90 VAL 90 90 90 VAL VAL C . n C 1 91 ASN 91 91 91 ASN ASN C . n C 1 92 GLN 92 92 92 GLN GLN C . n C 1 93 ASP 93 93 93 ASP ASP C . n C 1 94 PRO 94 94 94 PRO PRO C . n C 1 95 TYR 95 95 95 TYR TYR C . n C 1 96 GLY 96 96 96 GLY GLY C . n C 1 97 GLU 97 97 97 GLU GLU C . n C 1 98 GLY 98 98 98 GLY GLY C . n C 1 99 TRP 99 99 99 TRP TRP C . n C 1 100 ILE 100 100 100 ILE ILE C . n C 1 101 PHE 101 101 101 PHE PHE C . n C 1 102 ARG 102 102 102 ARG ARG C . n C 1 103 LEU 103 103 103 LEU LEU C . n C 1 104 LYS 104 104 104 LYS LYS C . n C 1 105 PRO 105 105 105 PRO PRO C . n C 1 106 ARG 106 106 106 ARG ARG C . n C 1 107 ASP 107 107 107 ASP ASP C . n C 1 108 MET 108 108 108 MET MET C . n C 1 109 GLY 109 109 109 GLY GLY C . n C 1 110 ASP 110 110 110 ASP ASP C . n C 1 111 LEU 111 111 111 LEU LEU C . n C 1 112 ASP 112 112 112 ASP ASP C . n C 1 113 GLU 113 113 113 GLU GLU C . n C 1 114 LEU 114 114 114 LEU LEU C . n C 1 115 LEU 115 115 115 LEU LEU C . n C 1 116 ASP 116 116 116 ASP ASP C . n C 1 117 ALA 117 117 117 ALA ALA C . n C 1 118 GLY 118 118 118 GLY GLY C . n C 1 119 GLY 119 119 119 GLY GLY C . n C 1 120 TYR 120 120 120 TYR TYR C . n C 1 121 GLN 121 121 121 GLN GLN C . n C 1 122 GLU 122 122 122 GLU GLU C . n C 1 123 VAL 123 123 123 VAL VAL C . n C 1 124 LEU 124 124 124 LEU LEU C . n C 1 125 GLU 125 125 125 GLU GLU C . n C 1 126 SER 126 126 126 SER SER C . n C 1 127 GLU 127 127 127 GLU GLU C . n C 1 128 ALA 128 128 128 ALA ALA C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 129 1 HOH WAT A . D 2 HOH 2 130 2 HOH WAT A . D 2 HOH 3 131 3 HOH WAT A . D 2 HOH 4 132 4 HOH WAT A . D 2 HOH 5 133 5 HOH WAT A . D 2 HOH 6 134 6 HOH WAT A . D 2 HOH 7 135 7 HOH WAT A . D 2 HOH 8 136 8 HOH WAT A . D 2 HOH 9 137 9 HOH WAT A . D 2 HOH 10 138 10 HOH WAT A . D 2 HOH 11 139 11 HOH WAT A . D 2 HOH 12 140 12 HOH WAT A . D 2 HOH 13 141 13 HOH WAT A . D 2 HOH 14 142 14 HOH WAT A . D 2 HOH 15 143 15 HOH WAT A . D 2 HOH 16 144 16 HOH WAT A . D 2 HOH 17 145 17 HOH WAT A . D 2 HOH 18 146 18 HOH WAT A . D 2 HOH 19 147 19 HOH WAT A . D 2 HOH 20 148 20 HOH WAT A . D 2 HOH 21 149 21 HOH WAT A . D 2 HOH 22 150 22 HOH WAT A . D 2 HOH 23 151 23 HOH WAT A . D 2 HOH 24 152 24 HOH WAT A . D 2 HOH 25 153 25 HOH WAT A . D 2 HOH 26 154 26 HOH WAT A . D 2 HOH 27 155 27 HOH WAT A . D 2 HOH 28 156 28 HOH WAT A . D 2 HOH 29 157 29 HOH WAT A . D 2 HOH 30 158 30 HOH WAT A . D 2 HOH 31 159 31 HOH WAT A . D 2 HOH 32 160 32 HOH WAT A . D 2 HOH 33 161 33 HOH WAT A . D 2 HOH 34 162 34 HOH WAT A . D 2 HOH 35 163 35 HOH WAT A . D 2 HOH 36 164 36 HOH WAT A . D 2 HOH 37 165 37 HOH WAT A . D 2 HOH 38 166 38 HOH WAT A . D 2 HOH 39 167 39 HOH WAT A . D 2 HOH 40 168 40 HOH WAT A . D 2 HOH 41 169 41 HOH WAT A . D 2 HOH 42 170 42 HOH WAT A . D 2 HOH 43 171 43 HOH WAT A . D 2 HOH 44 172 102 HOH WAT A . E 2 HOH 1 129 44 HOH WAT B . E 2 HOH 2 130 45 HOH WAT B . E 2 HOH 3 131 46 HOH WAT B . E 2 HOH 4 132 47 HOH WAT B . E 2 HOH 5 133 48 HOH WAT B . E 2 HOH 6 134 49 HOH WAT B . E 2 HOH 7 135 50 HOH WAT B . E 2 HOH 8 136 51 HOH WAT B . E 2 HOH 9 137 52 HOH WAT B . E 2 HOH 10 138 53 HOH WAT B . E 2 HOH 11 139 54 HOH WAT B . E 2 HOH 12 140 55 HOH WAT B . E 2 HOH 13 141 56 HOH WAT B . E 2 HOH 14 142 57 HOH WAT B . E 2 HOH 15 143 58 HOH WAT B . E 2 HOH 16 144 59 HOH WAT B . E 2 HOH 17 145 60 HOH WAT B . E 2 HOH 18 146 61 HOH WAT B . E 2 HOH 19 147 62 HOH WAT B . E 2 HOH 20 148 63 HOH WAT B . E 2 HOH 21 149 64 HOH WAT B . E 2 HOH 22 150 65 HOH WAT B . E 2 HOH 23 151 66 HOH WAT B . E 2 HOH 24 152 67 HOH WAT B . E 2 HOH 25 153 68 HOH WAT B . E 2 HOH 26 154 69 HOH WAT B . E 2 HOH 27 155 70 HOH WAT B . E 2 HOH 28 156 71 HOH WAT B . E 2 HOH 29 157 72 HOH WAT B . E 2 HOH 30 158 73 HOH WAT B . E 2 HOH 31 159 74 HOH WAT B . E 2 HOH 32 160 75 HOH WAT B . E 2 HOH 33 161 76 HOH WAT B . E 2 HOH 34 162 77 HOH WAT B . E 2 HOH 35 163 78 HOH WAT B . E 2 HOH 36 164 79 HOH WAT B . F 2 HOH 1 129 80 HOH WAT C . F 2 HOH 2 130 81 HOH WAT C . F 2 HOH 3 131 82 HOH WAT C . F 2 HOH 4 132 83 HOH WAT C . F 2 HOH 5 133 84 HOH WAT C . F 2 HOH 6 134 85 HOH WAT C . F 2 HOH 7 135 86 HOH WAT C . F 2 HOH 8 136 87 HOH WAT C . F 2 HOH 9 137 88 HOH WAT C . F 2 HOH 10 138 89 HOH WAT C . F 2 HOH 11 139 90 HOH WAT C . F 2 HOH 12 140 91 HOH WAT C . F 2 HOH 13 141 92 HOH WAT C . F 2 HOH 14 142 93 HOH WAT C . F 2 HOH 15 143 94 HOH WAT C . F 2 HOH 16 144 95 HOH WAT C . F 2 HOH 17 145 96 HOH WAT C . F 2 HOH 18 146 97 HOH WAT C . F 2 HOH 19 147 98 HOH WAT C . F 2 HOH 20 148 99 HOH WAT C . F 2 HOH 21 149 100 HOH WAT C . F 2 HOH 22 150 101 HOH WAT C . F 2 HOH 23 151 103 HOH WAT C . F 2 HOH 24 152 104 HOH WAT C . F 2 HOH 25 153 105 HOH WAT C . F 2 HOH 26 154 106 HOH WAT C . F 2 HOH 27 155 107 HOH WAT C . F 2 HOH 28 156 108 HOH WAT C . F 2 HOH 29 157 109 HOH WAT C . F 2 HOH 30 158 110 HOH WAT C . F 2 HOH 31 159 111 HOH WAT C . F 2 HOH 32 160 112 HOH WAT C . F 2 HOH 33 161 113 HOH WAT C . F 2 HOH 34 162 114 HOH WAT C . F 2 HOH 35 163 115 HOH WAT C . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 3 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D 2 1 B,E 3 1 C,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-08-26 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 EPMR phasing . ? 3 CNS refinement 1.0 ? 4 HKL-2000 'data reduction' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 61 ? ? -109.99 -158.38 2 1 THR A 64 ? ? -170.42 -179.91 3 1 PRO A 71 ? ? -38.25 -35.38 4 1 ASP A 93 ? ? -155.00 69.98 5 1 ASP A 112 ? ? -63.83 4.47 6 1 GLU B 19 ? ? -154.11 86.43 7 1 ASP B 37 ? ? -53.12 103.15 8 1 ASP B 93 ? ? -159.40 62.68 9 1 THR C 64 ? ? -146.08 -144.29 10 1 ASP C 93 ? ? -158.56 70.60 11 1 TRP C 99 ? ? -49.60 151.80 12 1 ASP C 107 ? ? -161.91 107.03 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 B MET 1 ? B MET 1 3 1 Y 1 C MET 1 ? C MET 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TRP N CA sing N N 293 TRP N H sing N N 294 TRP N H2 sing N N 295 TRP CA C sing N N 296 TRP CA CB sing N N 297 TRP CA HA sing N N 298 TRP C O doub N N 299 TRP C OXT sing N N 300 TRP CB CG sing N N 301 TRP CB HB2 sing N N 302 TRP CB HB3 sing N N 303 TRP CG CD1 doub Y N 304 TRP CG CD2 sing Y N 305 TRP CD1 NE1 sing Y N 306 TRP CD1 HD1 sing N N 307 TRP CD2 CE2 doub Y N 308 TRP CD2 CE3 sing Y N 309 TRP NE1 CE2 sing Y N 310 TRP NE1 HE1 sing N N 311 TRP CE2 CZ2 sing Y N 312 TRP CE3 CZ3 doub Y N 313 TRP CE3 HE3 sing N N 314 TRP CZ2 CH2 doub Y N 315 TRP CZ2 HZ2 sing N N 316 TRP CZ3 CH2 sing Y N 317 TRP CZ3 HZ3 sing N N 318 TRP CH2 HH2 sing N N 319 TRP OXT HXT sing N N 320 TYR N CA sing N N 321 TYR N H sing N N 322 TYR N H2 sing N N 323 TYR CA C sing N N 324 TYR CA CB sing N N 325 TYR CA HA sing N N 326 TYR C O doub N N 327 TYR C OXT sing N N 328 TYR CB CG sing N N 329 TYR CB HB2 sing N N 330 TYR CB HB3 sing N N 331 TYR CG CD1 doub Y N 332 TYR CG CD2 sing Y N 333 TYR CD1 CE1 sing Y N 334 TYR CD1 HD1 sing N N 335 TYR CD2 CE2 doub Y N 336 TYR CD2 HD2 sing N N 337 TYR CE1 CZ doub Y N 338 TYR CE1 HE1 sing N N 339 TYR CE2 CZ sing Y N 340 TYR CE2 HE2 sing N N 341 TYR CZ OH sing N N 342 TYR OH HH sing N N 343 TYR OXT HXT sing N N 344 VAL N CA sing N N 345 VAL N H sing N N 346 VAL N H2 sing N N 347 VAL CA C sing N N 348 VAL CA CB sing N N 349 VAL CA HA sing N N 350 VAL C O doub N N 351 VAL C OXT sing N N 352 VAL CB CG1 sing N N 353 VAL CB CG2 sing N N 354 VAL CB HB sing N N 355 VAL CG1 HG11 sing N N 356 VAL CG1 HG12 sing N N 357 VAL CG1 HG13 sing N N 358 VAL CG2 HG21 sing N N 359 VAL CG2 HG22 sing N N 360 VAL CG2 HG23 sing N N 361 VAL OXT HXT sing N N 362 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1HPC _pdbx_initial_refinement_model.details 'PDB ENTRY 1HPC' #