HEADER IMMUNOGLOBULIN 28-APR-95 1OPG TITLE OPG2 FAB FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: OPG2 FAB (LIGHT CHAIN); COMPND 3 CHAIN: L; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: OPG2 FAB (HEAVY CHAIN); COMPND 6 CHAIN: H SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 TISSUE: PLATELET; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_COMMON: HUMAN; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 TISSUE: PLATELET KEYWDS CELL ADHESION MOLECULE, IMMUNOGLOBULIN EXPDTA X-RAY DIFFRACTION AUTHOR R.KODANDAPANI,B.VEERAPANDIAN,K.R.ELY REVDAT 3 24-FEB-09 1OPG 1 VERSN REVDAT 2 01-APR-03 1OPG 1 JRNL REVDAT 1 31-JUL-95 1OPG 0 JRNL AUTH R.KODANDAPANI,B.VEERAPANDIAN,T.J.KUNICKI,K.R.ELY JRNL TITL CRYSTAL STRUCTURE OF THE OPG2 FAB. AN ANTIRECEPTOR JRNL TITL 2 ANTIBODY THAT MIMICS AN RGD CELL ADHESION SITE. JRNL REF J.BIOL.CHEM. V. 270 2268 1995 JRNL REFN ISSN 0021-9258 JRNL PMID 7836460 JRNL DOI 10.1074/JBC.270.5.2268 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.CELIKEL,M.M.WILLIAMSON,T.J.KUNICKI,K.R.ELY REMARK 1 TITL CRYSTALLIZATION OF OPG2 FAB FRAGMENT: A FIBRINOGEN REMARK 1 TITL 2 MIMIC WITH SPECIFICITY FOR THE PLATELET REMARK 1 TITL 3 GLYCOPROTEIN REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 49 421 1992 REMARK 1 REFN ISSN 0907-4449 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PROLSQ REMARK 3 AUTHORS : KONNERT,HENDRICKSON REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 22609 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : NULL REMARK 3 FREE R VALUE : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL WITH ALL DATA. REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : NULL REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : NULL REMARK 3 FREE R VALUE (NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3478 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 488 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : 0.017 ; 0.020 REMARK 3 ANGLE DISTANCE (A) : 0.063 ; 0.045 REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : 0.044 ; 0.035 REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : 0.016 ; 0.020 REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : 0.220 ; 0.300 REMARK 3 MULTIPLE TORSION (A) : 0.268 ; 0.300 REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : 0.256 ; 0.300 REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : 2.900 ; 5.000 REMARK 3 STAGGERED (DEGREES) : 24.300; 20.000 REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1OPG COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-92 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : NULL REMARK 200 RADIATION SOURCE : NULL REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : NULL REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XENGEN (HOWARD, NIELSEN, REMARK 200 XUONG) REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28703 REMARK 200 RESOLUTION RANGE HIGH (A) : NULL REMARK 200 RESOLUTION RANGE LOW (A) : NULL REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 46.55000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.90000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.55000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.90000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CA GLY H 107 O HOH H 404 2.14 REMARK 500 O MET H 147 O HOH H 396 2.16 REMARK 500 ND2 ASN L 210 O HOH L 376 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH L 333 O HOH L 333 2975 1.54 REMARK 500 CB ASN H 77 O HOH H 273 2985 1.72 REMARK 500 CB ARG H 87 O HOH L 436 4476 1.74 REMARK 500 NH1 ARG H 16 O HOH L 374 4476 1.75 REMARK 500 OD1 ASN L 161 CA GLY H 106 3845 1.81 REMARK 500 OD1 ASN L 190 O HOH L 333 2975 1.82 REMARK 500 N TYR H 57 O HOH L 303 3855 2.03 REMARK 500 ND2 ASN L 190 O HOH L 333 2975 2.10 REMARK 500 OD1 ASN L 161 C GLY H 106 3845 2.10 REMARK 500 CG ARG H 87 O HOH L 318 4476 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP L 1 OD1 - CG - OD2 ANGL. DEV. = 14.0 DEGREES REMARK 500 ASP L 1 CB - CG - OD1 ANGL. DEV. = -7.2 DEGREES REMARK 500 ASP L 1 CB - CG - OD2 ANGL. DEV. = -6.8 DEGREES REMARK 500 LEU L 3 N - CA - CB ANGL. DEV. = 16.1 DEGREES REMARK 500 LEU L 3 O - C - N ANGL. DEV. = 14.6 DEGREES REMARK 500 LEU L 4 O - C - N ANGL. DEV. = 9.9 DEGREES REMARK 500 ASP L 17 OD1 - CG - OD2 ANGL. DEV. = 15.0 DEGREES REMARK 500 ASP L 17 CB - CG - OD2 ANGL. DEV. = -13.6 DEGREES REMARK 500 CYS L 23 CA - CB - SG ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG L 24 CD - NE - CZ ANGL. DEV. = 33.5 DEGREES REMARK 500 ARG L 24 NH1 - CZ - NH2 ANGL. DEV. = -9.0 DEGREES REMARK 500 ARG L 24 NE - CZ - NH2 ANGL. DEV. = 11.3 DEGREES REMARK 500 ALA L 25 CB - CA - C ANGL. DEV. = -9.3 DEGREES REMARK 500 TYR L 36 CB - CG - CD2 ANGL. DEV. = -8.4 DEGREES REMARK 500 TYR L 36 CB - CG - CD1 ANGL. DEV. = 8.1 DEGREES REMARK 500 ARG L 45 CD - NE - CZ ANGL. DEV. = 26.4 DEGREES REMARK 500 ARG L 45 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 SER L 56 CB - CA - C ANGL. DEV. = -15.1 DEGREES REMARK 500 ILE L 58 CA - CB - CG2 ANGL. DEV. = 12.9 DEGREES REMARK 500 SER L 60 N - CA - CB ANGL. DEV. = -14.1 DEGREES REMARK 500 ARG L 61 NE - CZ - NH1 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG L 61 NE - CZ - NH2 ANGL. DEV. = 7.5 DEGREES REMARK 500 ASP L 70 CB - CG - OD2 ANGL. DEV. = -7.7 DEGREES REMARK 500 ASN L 76 CB - CA - C ANGL. DEV. = 13.1 DEGREES REMARK 500 SER L 77 N - CA - CB ANGL. DEV. = 9.3 DEGREES REMARK 500 GLU L 79 OE1 - CD - OE2 ANGL. DEV. = 8.6 DEGREES REMARK 500 GLU L 79 CG - CD - OE2 ANGL. DEV. = -12.1 DEGREES REMARK 500 THR L 80 CB - CA - C ANGL. DEV. = 19.9 DEGREES REMARK 500 GLU L 81 CA - CB - CG ANGL. DEV. = 25.3 DEGREES REMARK 500 GLU L 81 OE1 - CD - OE2 ANGL. DEV. = -7.8 DEGREES REMARK 500 ASP L 82 CB - CG - OD1 ANGL. DEV. = 10.2 DEGREES REMARK 500 CYS L 88 CA - CB - SG ANGL. DEV. = 8.3 DEGREES REMARK 500 GLN L 90 CB - CG - CD ANGL. DEV. = 20.0 DEGREES REMARK 500 LYS L 103 CA - C - O ANGL. DEV. = -17.0 DEGREES REMARK 500 LYS L 103 O - C - N ANGL. DEV. = 11.5 DEGREES REMARK 500 ARG L 108 NE - CZ - NH2 ANGL. DEV. = 5.3 DEGREES REMARK 500 ALA L 109 N - CA - CB ANGL. DEV. = 8.7 DEGREES REMARK 500 ASP L 110 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ALA L 111 CB - CA - C ANGL. DEV. = -9.9 DEGREES REMARK 500 THR L 114 N - CA - C ANGL. DEV. = -17.8 DEGREES REMARK 500 VAL L 115 CA - CB - CG2 ANGL. DEV. = 10.5 DEGREES REMARK 500 SER L 121 N - CA - CB ANGL. DEV. = 9.0 DEGREES REMARK 500 GLU L 123 CA - CB - CG ANGL. DEV. = 20.5 DEGREES REMARK 500 GLN L 124 N - CA - CB ANGL. DEV. = 11.2 DEGREES REMARK 500 SER L 127 C - N - CA ANGL. DEV. = 15.7 DEGREES REMARK 500 ASP L 151 CB - CG - OD1 ANGL. DEV. = -8.7 DEGREES REMARK 500 ASP L 151 CB - CG - OD2 ANGL. DEV. = 7.7 DEGREES REMARK 500 GLU L 154 CA - CB - CG ANGL. DEV. = 19.7 DEGREES REMARK 500 ARG L 155 CA - CB - CG ANGL. DEV. = -19.9 DEGREES REMARK 500 ARG L 155 NE - CZ - NH1 ANGL. DEV. = 8.1 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 163 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU L 11 129.59 176.97 REMARK 500 SER L 28 -95.46 -39.26 REMARK 500 SER L 30 -92.91 4.88 REMARK 500 ASN L 32 36.74 -70.75 REMARK 500 HIS L 41 16.17 44.13 REMARK 500 LEU L 47 -63.91 -108.61 REMARK 500 TYR L 50 66.45 39.12 REMARK 500 ALA L 51 28.60 20.92 REMARK 500 SER L 52 -42.09 -159.61 REMARK 500 ILE L 55 -72.67 -94.31 REMARK 500 SER L 56 127.96 154.05 REMARK 500 ASN L 138 71.65 45.99 REMARK 500 ASN L 212 -82.59 176.38 REMARK 500 GLU L 213 -147.75 77.60 REMARK 500 VAL H 2 89.30 73.66 REMARK 500 ARG H 16 -162.16 -78.23 REMARK 500 ALA H 49 139.39 -179.58 REMARK 500 TYR H 57 64.46 83.58 REMARK 500 ALA H 92 178.89 167.03 REMARK 500 PHE H 101 115.65 -19.65 REMARK 500 ALA H 141 -60.41 -124.95 REMARK 500 ALA H 142 71.26 -178.32 REMARK 500 LEU H 171 98.18 -69.11 REMARK 500 SER H 184 51.80 32.66 REMARK 500 SER H 198 -61.80 -145.86 REMARK 500 ARG H 200 -116.07 -129.34 REMARK 500 VAL H 223 108.43 30.34 REMARK 500 PRO H 224 69.50 -51.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG H 72 0.12 SIDE_CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH L 235 DISTANCE = 5.60 ANGSTROMS REMARK 525 HOH L 244 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH H 260 DISTANCE = 5.14 ANGSTROMS REMARK 525 HOH H 284 DISTANCE = 5.29 ANGSTROMS REMARK 525 HOH L 291 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH L 301 DISTANCE = 5.58 ANGSTROMS REMARK 525 HOH H 363 DISTANCE = 5.12 ANGSTROMS REMARK 525 HOH H 376 DISTANCE = 5.99 ANGSTROMS REMARK 525 HOH H 377 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH L 364 DISTANCE = 6.98 ANGSTROMS REMARK 525 HOH L 370 DISTANCE = 5.31 ANGSTROMS REMARK 525 HOH L 403 DISTANCE = 5.77 ANGSTROMS REMARK 525 HOH H 429 DISTANCE = 5.50 ANGSTROMS REMARK 525 HOH L 421 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH H 447 DISTANCE = 5.19 ANGSTROMS REMARK 525 HOH H 453 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH L 442 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH L 454 DISTANCE = 7.21 ANGSTROMS DBREF 1OPG H 126 227 UNP P01868 GC1_MOUSE 1 102 DBREF 1OPG L 1 214 PDB 1OPG 1OPG 1 214 SEQRES 1 L 214 ASP GLU LEU LEU THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 214 THR PRO GLY ASP SER VAL SER LEU SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER ILE SER ASN ASN LEU HIS TRP TYR GLN GLN LYS SEQRES 4 L 214 SER HIS GLU SER PRO ARG LEU LEU ILE LYS TYR ALA SER SEQRES 5 L 214 GLN SER ILE SER GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU SER ILE ASN SER VAL SEQRES 7 L 214 GLU THR GLU ASP PHE GLY MET TYR PHE CYS GLN GLN SER SEQRES 8 L 214 ASN SER TRP PRO LEU THR PHE GLY GLY GLY SER LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE SEQRES 10 L 214 PHE PRO PRO SER SER GLU GLN LEU THR SER GLY GLY ALA SEQRES 11 L 214 SER VAL VAL CYS PHE LEU ASN ASN PHE TYR PRO LYS ASP SEQRES 12 L 214 ILE ASN VAL LYS TRP LYS ILE ASP GLY SER GLU ARG GLN SEQRES 13 L 214 ASN GLY VAL LEU ASN SER TRP THR ASP GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER MET SER SER THR LEU THR LEU THR SEQRES 15 L 214 LYS ASP GLU TYR GLU ARG HIS ASN SER TYR THR CYS GLU SEQRES 16 L 214 ALA THR HIS LYS THR SER THR SER PRO ILE VAL LYS SER SEQRES 17 L 214 PHE ASN ARG ASN GLU CYS SEQRES 1 H 227 GLU VAL GLN LEU VAL GLN SER GLY GLY GLY LEU VAL ASN SEQRES 2 H 227 PRO GLY ARG SER LEU LYS LEU SER CYS ALA ALA SER GLY SEQRES 3 H 227 PHE THR PHE SER SER TYR GLY MET SER TRP VAL ARG GLN SEQRES 4 H 227 THR PRO GLU LYS ARG LEU GLU TRP VAL ALA ALA ILE SER SEQRES 5 H 227 GLY GLY GLY THR TYR ILE HIS TYR PRO ASP SER VAL LYS SEQRES 6 H 227 GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN ASN SEQRES 7 H 227 LEU TYR LEU GLN MET SER SER LEU ARG SER GLU ASP THR SEQRES 8 H 227 ALA LEU TYR TYR CYS THR ARG HIS PRO PHE TYR ARG TYR SEQRES 9 H 227 ASP GLY GLY ASN TYR TYR ALA MET ASP HIS TRP GLY GLN SEQRES 10 H 227 GLY THR SER VAL THR VAL SER ALA ALA LYS THR THR PRO SEQRES 11 H 227 PRO SER VAL TYR PRO LEU ALA PRO GLY SER ALA ALA GLN SEQRES 12 H 227 THR ASN SER MET VAL THR LEU GLY CYS LEU VAL LYS GLY SEQRES 13 H 227 TYR PHE PRO GLU PRO VAL THR VAL THR TRP ASN SER GLY SEQRES 14 H 227 SER LEU SER SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 227 GLN SER ASP LEU TYR THR LEU SER SER SER VAL THR VAL SEQRES 16 H 227 PRO SER SER PRO ARG PRO SER GLU THR VAL THR CYS ASN SEQRES 17 H 227 VAL ALA HIS PRO ALA SER SER THR LYS VAL ASP LYS LYS SEQRES 18 H 227 ILE VAL PRO ARG ASP CYS FORMUL 3 HOH *488(H2 O) HELIX 1 1 TYR L 50 SER L 52 5 3 HELIX 2 2 THR L 80 ASP L 82 5 3 HELIX 3 3 LEU L 125 SER L 127 5 3 HELIX 4 4 LYS L 183 ARG L 188 1 6 HELIX 5 5 PHE H 29 SER H 31 5 3 HELIX 6 6 SER H 88 ASP H 90 5 3 HELIX 7 7 ASN H 167 GLY H 169 5 3 HELIX 8 8 PRO H 212 SER H 214 5 3 SHEET 1 A 4 LEU L 4 SER L 7 0 SHEET 2 A 4 VAL L 19 ALA L 25 -1 N ARG L 24 O THR L 5 SHEET 3 A 4 ASP L 70 ILE L 75 -1 N ILE L 75 O VAL L 19 SHEET 4 A 4 PHE L 62 SER L 67 -1 N SER L 67 O ASP L 70 SHEET 1 B 3 MET L 85 GLN L 90 0 SHEET 2 B 3 LEU L 33 GLN L 38 -1 N GLN L 38 O MET L 85 SHEET 3 B 3 ARG L 45 ILE L 48 -1 N ILE L 48 O TRP L 35 SHEET 1 C 4 THR L 114 PHE L 118 0 SHEET 2 C 4 GLY L 129 ASN L 137 -1 N ASN L 137 O THR L 114 SHEET 3 C 4 MET L 175 THR L 182 -1 N LEU L 181 O ALA L 130 SHEET 4 C 4 VAL L 159 TRP L 163 -1 N SER L 162 O SER L 176 SHEET 1 D 4 SER L 153 ARG L 155 0 SHEET 2 D 4 ILE L 144 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 D 4 SER L 191 HIS L 198 -1 N THR L 197 O ASN L 145 SHEET 4 D 4 ILE L 205 ASN L 210 -1 N PHE L 209 O TYR L 192 SHEET 1 E 4 GLN H 3 SER H 7 0 SHEET 2 E 4 LEU H 18 SER H 25 -1 N SER H 25 O GLN H 3 SHEET 3 E 4 ASN H 78 MET H 83 -1 N MET H 83 O LEU H 18 SHEET 4 E 4 PHE H 68 ASP H 73 -1 N ASP H 73 O ASN H 78 SHEET 1 F 4 THR H 119 VAL H 121 0 SHEET 2 F 4 ALA H 92 ARG H 98 -1 N TYR H 94 O THR H 119 SHEET 3 F 4 MET H 34 GLN H 39 -1 N GLN H 39 O LEU H 93 SHEET 4 F 4 LEU H 45 ILE H 51 -1 N ILE H 51 O MET H 34 SHEET 1 G 4 SER H 132 LEU H 136 0 SHEET 2 G 4 MET H 147 TYR H 157 -1 N LYS H 155 O SER H 132 SHEET 3 G 4 TYR H 187 PRO H 196 -1 N VAL H 195 O VAL H 148 SHEET 4 G 4 VAL H 175 PHE H 178 -1 N PHE H 178 O SER H 190 SHEET 1 H 3 THR H 163 TRP H 166 0 SHEET 2 H 3 THR H 206 HIS H 211 -1 N ALA H 210 O THR H 163 SHEET 3 H 3 THR H 216 LYS H 221 -1 N LYS H 220 O CYS H 207 SHEET 1 I 2 VAL H 181 GLN H 183 0 SHEET 2 I 2 LEU H 186 THR H 188 -1 N THR H 188 O VAL H 181 SHEET 1 J 2 THR H 97 HIS H 99 0 SHEET 2 J 2 MET H 112 TRP H 115 -1 N HIS H 114 O ARG H 98 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 2 CYS L 134 CYS L 194 1555 1555 1.97 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.25 SSBOND 4 CYS H 152 CYS H 207 1555 1555 2.42 CISPEP 1 SER L 7 PRO L 8 0 -4.02 CISPEP 2 TRP L 94 PRO L 95 0 2.05 CISPEP 3 TYR L 140 PRO L 141 0 0.85 CISPEP 4 PHE H 158 PRO H 159 0 -0.26 CISPEP 5 GLU H 160 PRO H 161 0 3.36 CRYST1 93.100 83.800 53.700 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010741 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011933 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018622 0.00000