HEADER TRANSPORT PROTEIN 28-MAR-03 1OW4 TITLE CRYSTAL STRUCTURE OF A PHEROMONE BINDING PROTEIN FROM THE COCKROACH TITLE 2 LEUCOPHAEA MADERAE IN COMPLEX WITH THE FLUORESCENT REPORTER ANS (1- TITLE 3 ANILINONAPHTALENE-8-SULFONIC ACID), COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHEROMONE BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEUCOPHAEA MADERAE; SOURCE 3 ORGANISM_COMMON: MADEIRA COCKROACH; SOURCE 4 ORGANISM_TAXID: 6988; SOURCE 5 GENE: PHEROMONE BINDING PROTEIN (PBP); SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B+ KEYWDS PHEROMONE BINDING PROTEIN, LIGAND 8-ANILINO-1-NAPHTALENESULFONIC KEYWDS 2 ACID, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.LARTIGUE,A.GRUEZ,S.SPINELLI,S.RIVIERE,R.BROSSUT,M.TEGONI, AUTHOR 2 C.CAMBILLAU REVDAT 5 03-APR-24 1OW4 1 REMARK SEQADV REVDAT 4 13-JUL-11 1OW4 1 VERSN REVDAT 3 24-FEB-09 1OW4 1 VERSN REVDAT 2 19-AUG-03 1OW4 1 JRNL REVDAT 1 05-AUG-03 1OW4 0 JRNL AUTH A.LARTIGUE,A.GRUEZ,S.SPINELLI,S.RIVIERE,R.BROSSUT,M.TEGONI, JRNL AUTH 2 C.CAMBILLAU JRNL TITL THE CRYSTAL STRUCTURE OF A COCKROACH PHEROMONE-BINDING JRNL TITL 2 PROTEIN SUGGESTS A NEW LIGAND BINDING AND RELEASE MECHANISM JRNL REF J.BIOL.CHEM. V. 278 30213 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12766173 JRNL DOI 10.1074/JBC.M304688200 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 3 NUMBER OF REFLECTIONS : 29762 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1565 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1355 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1830 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1821 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 243 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.34000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -0.03000 REMARK 3 B12 (A**2) : -0.02000 REMARK 3 B13 (A**2) : -0.89000 REMARK 3 B23 (A**2) : 0.21000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.057 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.633 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1931 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1683 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2611 ; 1.762 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3943 ; 2.853 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 237 ; 4.872 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 285 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2143 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 382 ; 0.016 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 509 ; 0.216 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2153 ; 0.248 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1139 ; 0.101 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 153 ; 0.161 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 11 ; 0.132 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 55 ; 0.360 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 18 ; 0.193 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1195 ; 0.899 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1927 ; 1.635 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 736 ; 2.564 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 684 ; 3.945 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): -14.5040 10.9230 -10.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.0314 T22: 0.0300 REMARK 3 T33: 0.0388 T12: -0.0059 REMARK 3 T13: 0.0247 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 1.6030 L22: 0.6511 REMARK 3 L33: 0.8433 L12: -0.0121 REMARK 3 L13: 0.5237 L23: -0.2730 REMARK 3 S TENSOR REMARK 3 S11: 0.0264 S12: -0.0568 S13: -0.0389 REMARK 3 S21: -0.0036 S22: -0.0419 S23: -0.0154 REMARK 3 S31: 0.0009 S32: -0.0545 S33: 0.0155 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): 4.8750 -10.8120 8.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0352 REMARK 3 T33: 0.0336 T12: 0.0008 REMARK 3 T13: 0.0276 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 1.4473 L22: 1.1453 REMARK 3 L33: 0.7601 L12: 0.0200 REMARK 3 L13: 0.5065 L23: -0.0849 REMARK 3 S TENSOR REMARK 3 S11: -0.0129 S12: 0.0779 S13: -0.0008 REMARK 3 S21: -0.0318 S22: -0.0014 S23: -0.0398 REMARK 3 S31: 0.0158 S32: 0.0748 S33: 0.0143 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1OW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018725. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97887 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31333 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 25.906 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.4 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.50 REMARK 200 R MERGE FOR SHELL (I) : 0.12200 REMARK 200 R SYM FOR SHELL (I) : 0.12200 REMARK 200 FOR SHELL : 4.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: LMA-PBP (NATIVE) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 10000, IMIDAZOLE/MALATE., PH 8.5, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 ASP A -9 REMARK 465 ILE A -8 REMARK 465 GLY A -7 REMARK 465 ILE A -6 REMARK 465 ASN A -5 REMARK 465 SER A -4 REMARK 465 ASP A -3 REMARK 465 PRO A -2 REMARK 465 MET B -10 REMARK 465 ASP B -9 REMARK 465 ILE B -8 REMARK 465 GLY B -7 REMARK 465 ILE B -6 REMARK 465 ASN B -5 REMARK 465 SER B -4 REMARK 465 ASP B -3 REMARK 465 PRO B -2 REMARK 465 ASN B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 0 OG REMARK 470 PHE B 77 CG CD1 CD2 CE1 CE2 CZ REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER A 0 OG REMARK 480 LYS A 28 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 28 CD LYS A 28 CE 0.218 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 102 CB - CG - OD2 ANGL. DEV. = 6.0 DEGREES REMARK 500 ASP A 105 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 ASP A 112 CB - CG - OD2 ANGL. DEV. = 7.4 DEGREES REMARK 500 ASP B 26 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG B 39 NE - CZ - NH1 ANGL. DEV. = 4.9 DEGREES REMARK 500 ARG B 39 NE - CZ - NH2 ANGL. DEV. = -5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2AN B 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2AN A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ORG RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF A PHEROMONE BINDING PROTEIN FROM THE REMARK 900 COCKROACH LEUCOPHAEA MADERAE REVEALS A NEW MECHANISM OF PHEROMONE REMARK 900 BINDING REMARK 900 RELATED ID: 1P28 RELATED DB: PDB REMARK 900 THE CRYSTAL STRUCTURE OF A PHEROMONE BINDING PROTEIN FROM THE REMARK 900 COCKROACH LEUCOPHAEA MADERAE IN COMPLEX WITH A COMPONENT OF THE REMARK 900 PHEROMONAL BLEND: 3-HYDROXY-BUTAN-2-ONE DBREF 1OW4 A -10 118 UNP Q8MTC1 Q8MTC1_LEUMA 9 137 DBREF 1OW4 B -10 118 UNP Q8MTC1 Q8MTC1_LEUMA 9 137 SEQADV 1OW4 MET A -10 UNP Q8MTC1 LEU 9 CLONING ARTIFACT SEQADV 1OW4 ASP A -9 UNP Q8MTC1 LEU 10 CLONING ARTIFACT SEQADV 1OW4 ILE A -8 UNP Q8MTC1 ALA 11 CLONING ARTIFACT SEQADV 1OW4 GLY A -7 UNP Q8MTC1 VAL 12 CLONING ARTIFACT SEQADV 1OW4 ILE A -6 UNP Q8MTC1 ALA 13 CLONING ARTIFACT SEQADV 1OW4 ASN A -5 UNP Q8MTC1 THR 14 CLONING ARTIFACT SEQADV 1OW4 SER A -4 UNP Q8MTC1 ALA 15 CLONING ARTIFACT SEQADV 1OW4 ASP A -3 UNP Q8MTC1 THR 16 CLONING ARTIFACT SEQADV 1OW4 PRO A -2 UNP Q8MTC1 LEU 17 CLONING ARTIFACT SEQADV 1OW4 ASN A -1 UNP Q8MTC1 ALA 18 CLONING ARTIFACT SEQADV 1OW4 SER A 0 UNP Q8MTC1 ASP 19 CLONING ARTIFACT SEQADV 1OW4 MET B -10 UNP Q8MTC1 LEU 9 CLONING ARTIFACT SEQADV 1OW4 ASP B -9 UNP Q8MTC1 LEU 10 CLONING ARTIFACT SEQADV 1OW4 ILE B -8 UNP Q8MTC1 ALA 11 CLONING ARTIFACT SEQADV 1OW4 GLY B -7 UNP Q8MTC1 VAL 12 CLONING ARTIFACT SEQADV 1OW4 ILE B -6 UNP Q8MTC1 ALA 13 CLONING ARTIFACT SEQADV 1OW4 ASN B -5 UNP Q8MTC1 THR 14 CLONING ARTIFACT SEQADV 1OW4 SER B -4 UNP Q8MTC1 ALA 15 CLONING ARTIFACT SEQADV 1OW4 ASP B -3 UNP Q8MTC1 THR 16 CLONING ARTIFACT SEQADV 1OW4 PRO B -2 UNP Q8MTC1 LEU 17 CLONING ARTIFACT SEQADV 1OW4 ASN B -1 UNP Q8MTC1 ALA 18 CLONING ARTIFACT SEQADV 1OW4 SER B 0 UNP Q8MTC1 ASP 19 CLONING ARTIFACT SEQRES 1 A 129 MET ASP ILE GLY ILE ASN SER ASP PRO ASN SER SER THR SEQRES 2 A 129 GLN SER TYR LYS ASP ALA MET GLY PRO LEU VAL ARG GLU SEQRES 3 A 129 CYS MET GLY SER VAL SER ALA THR GLU ASP ASP PHE LYS SEQRES 4 A 129 THR VAL LEU ASN ARG ASN PRO LEU GLU SER ARG THR ALA SEQRES 5 A 129 GLN CYS LEU LEU ALA CYS ALA LEU ASP LYS VAL GLY LEU SEQRES 6 A 129 ILE SER PRO GLU GLY ALA ILE TYR THR GLY ASP ASP LEU SEQRES 7 A 129 MET PRO VAL MET ASN ARG LEU TYR GLY PHE ASN ASP PHE SEQRES 8 A 129 LYS THR VAL MET LYS ALA LYS ALA VAL ASN ASP CYS ALA SEQRES 9 A 129 ASN GLN VAL ASN GLY ALA TYR PRO ASP ARG CYS ASP LEU SEQRES 10 A 129 ILE LYS ASN PHE THR ASP CYS VAL ARG ASN SER TYR SEQRES 1 B 129 MET ASP ILE GLY ILE ASN SER ASP PRO ASN SER SER THR SEQRES 2 B 129 GLN SER TYR LYS ASP ALA MET GLY PRO LEU VAL ARG GLU SEQRES 3 B 129 CYS MET GLY SER VAL SER ALA THR GLU ASP ASP PHE LYS SEQRES 4 B 129 THR VAL LEU ASN ARG ASN PRO LEU GLU SER ARG THR ALA SEQRES 5 B 129 GLN CYS LEU LEU ALA CYS ALA LEU ASP LYS VAL GLY LEU SEQRES 6 B 129 ILE SER PRO GLU GLY ALA ILE TYR THR GLY ASP ASP LEU SEQRES 7 B 129 MET PRO VAL MET ASN ARG LEU TYR GLY PHE ASN ASP PHE SEQRES 8 B 129 LYS THR VAL MET LYS ALA LYS ALA VAL ASN ASP CYS ALA SEQRES 9 B 129 ASN GLN VAL ASN GLY ALA TYR PRO ASP ARG CYS ASP LEU SEQRES 10 B 129 ILE LYS ASN PHE THR ASP CYS VAL ARG ASN SER TYR HET 2AN A1004 21 HET GOL A1002 6 HET 2AN B1003 21 HET GOL B1001 6 HETNAM 2AN 8-ANILINO-1-NAPHTHALENE SULFONATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 2AN 2(C16 H13 N O3 S) FORMUL 4 GOL 2(C3 H8 O3) FORMUL 7 HOH *243(H2 O) HELIX 1 1 THR A 2 MET A 17 1 16 HELIX 2 2 THR A 23 ASN A 32 1 10 HELIX 3 3 SER A 38 GLY A 53 1 16 HELIX 4 4 THR A 63 ASP A 66 5 4 HELIX 5 5 LEU A 67 GLY A 76 1 10 HELIX 6 6 ASP A 79 LYS A 85 1 7 HELIX 7 7 LYS A 85 ASN A 97 1 13 HELIX 8 8 ASP A 102 SER A 117 1 16 HELIX 9 9 THR B 2 MET B 17 1 16 HELIX 10 10 GLY B 18 SER B 21 5 4 HELIX 11 11 THR B 23 ASN B 32 1 10 HELIX 12 12 SER B 38 GLY B 53 1 16 HELIX 13 13 THR B 63 ASP B 66 5 4 HELIX 14 14 LEU B 67 GLY B 76 1 10 HELIX 15 15 ASP B 79 ASN B 97 1 19 HELIX 16 16 ASP B 102 SER B 117 1 16 SSBOND 1 CYS A 16 CYS A 47 1555 1555 2.12 SSBOND 2 CYS A 43 CYS A 104 1555 1555 2.08 SSBOND 3 CYS A 92 CYS A 113 1555 1555 2.08 SSBOND 4 CYS B 16 CYS B 47 1555 1555 2.10 SSBOND 5 CYS B 43 CYS B 104 1555 1555 2.06 SSBOND 6 CYS B 92 CYS B 113 1555 1555 2.12 SITE 1 AC1 9 TYR B 5 ARG B 33 TYR B 75 THR B 82 SITE 2 AC1 9 LYS B 85 VAL B 89 THR B 111 VAL B 114 SITE 3 AC1 9 GOL B1001 SITE 1 AC2 10 TYR A 5 ARG A 33 MET A 71 TYR A 75 SITE 2 AC2 10 THR A 82 VAL A 89 THR A 111 VAL A 114 SITE 3 AC2 10 GOL A1002 HOH A1076 SITE 1 AC3 6 TYR B 5 LEU B 74 TYR B 75 VAL B 89 SITE 2 AC3 6 VAL B 114 2AN B1003 SITE 1 AC4 6 LEU A 74 TYR A 75 VAL A 89 PHE A 110 SITE 2 AC4 6 VAL A 114 2AN A1004 CRYST1 43.422 45.070 45.379 118.55 92.63 107.17 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023030 0.007116 0.005508 0.00000 SCALE2 0.000000 0.023223 0.013948 0.00000 SCALE3 0.000000 0.000000 0.025733 0.00000