HEADER STRUCTURAL PROTEIN 31-MAR-03 1OWW TITLE SOLUTION STRUCTURE OF THE FIRST TYPE III MODULE OF HUMAN FIBRONECTIN TITLE 2 DETERMINED BY 1H, 15N NMR SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN FIRST TYPE III MODULE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 608-701 OF SWS P02751; COMPND 5 SYNONYM: FN; COLD-INSOLUBLE GLOBULIN; CIG; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-2 KEYWDS FIBRONECTIN TYPE III MODULE, STRUCTURAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 24 AUTHOR M.GAO,D.CRAIG,O.LEQUIN,I.D.CAMPBELL,V.VOGEL,K.SCHULTEN REVDAT 5 01-MAY-24 1OWW 1 REMARK REVDAT 4 07-JUL-21 1OWW 1 REMARK SEQADV REVDAT 3 24-FEB-09 1OWW 1 VERSN REVDAT 2 30-DEC-03 1OWW 1 JRNL REVDAT 1 07-OCT-03 1OWW 0 JRNL AUTH M.GAO,D.CRAIG,O.LEQUIN,I.D.CAMPBELL,V.VOGEL,K.SCHULTEN JRNL TITL STRUCTURE AND FUNCTIONAL SIGNIFICANCE OF MECHANICALLY JRNL TITL 2 UNFOLDED FIBRONECTIN TYPE III1 INTERMEDIATES JRNL REF PROC.NATL.ACAD.SCI.USA V. 100 14784 2003 JRNL REFN ISSN 0027-8424 JRNL PMID 14657397 JRNL DOI 10.1073/PNAS.2334390100 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH O.LEQUIN,D.SACHCHIDANAND,D.STAUNTON,J.POTTS,J.M.WERNER, REMARK 1 AUTH 2 I.D.CAMPBELL REMARK 1 TITL SOLUTION STRUCTURE OF THE FIRST TYPE III MODULE OF HUMAN REMARK 1 TITL 2 FIBRONECTIN DETERMINED BY 1H, 15N NMR SPECTROSCOPY REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.8 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES REFINED BY MOLECULAR REMARK 3 DYNAMICS USING RESIDUAL DIPOLAR COUPLINGS. STRUCTURES BASED ON A REMARK 3 TOTAL OF 1113 DISTANCE RESTRAINTS, 81 DIHEDRAL ANGLE RESTRAINTS REMARK 3 AND 57 RESIDUAL DIPOLAR COUPLINGS. REMARK 4 REMARK 4 1OWW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018753. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : UNBUFFERED REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1-2 MM [U-15N] PROTEIN, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_TOCSY; HNHA; 2D NOESY; REMARK 210 2D TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : OMEGA; DMX REMARK 210 SPECTROMETER MANUFACTURER : OXFORD; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2.3, XWINNMR 2.6, XEASY REMARK 210 1.3, DYANA 1.5 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 24 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 24 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-24 REMARK 465 RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 10 82.66 -169.15 REMARK 500 1 SER A 28 58.52 -98.99 REMARK 500 1 SER A 31 -84.24 -104.01 REMARK 500 1 LYS A 40 85.02 -69.86 REMARK 500 1 ASN A 41 -67.78 -147.52 REMARK 500 1 VAL A 43 53.42 -119.82 REMARK 500 2 THR A 9 -152.43 -132.58 REMARK 500 2 GLU A 10 -18.89 79.51 REMARK 500 2 SER A 13 119.47 -169.02 REMARK 500 2 HIS A 29 -49.89 -162.37 REMARK 500 2 SER A 31 -87.50 -110.53 REMARK 500 2 LYS A 40 83.07 -69.75 REMARK 500 2 ASN A 41 -89.81 -145.90 REMARK 500 3 GLU A 10 40.73 -107.08 REMARK 500 3 SER A 28 64.66 71.89 REMARK 500 3 SER A 31 -83.90 -99.35 REMARK 500 3 ASN A 41 -58.55 -154.32 REMARK 500 3 SER A 42 -167.53 -107.32 REMARK 500 3 LEU A 63 -160.83 -117.08 REMARK 500 3 THR A 92 -37.37 -157.57 REMARK 500 4 SER A 13 32.29 -157.54 REMARK 500 4 ASN A 16 -39.22 -165.80 REMARK 500 4 HIS A 29 -50.78 -160.85 REMARK 500 4 SER A 31 -87.55 -106.06 REMARK 500 4 LYS A 40 88.02 -63.66 REMARK 500 4 ASN A 41 -132.09 -130.39 REMARK 500 4 VAL A 43 41.63 -100.60 REMARK 500 4 GLN A 78 34.00 -76.29 REMARK 500 4 TYR A 79 14.13 -148.67 REMARK 500 5 GLU A 10 -64.91 149.21 REMARK 500 5 THR A 11 87.45 -155.08 REMARK 500 5 PRO A 12 34.87 -86.32 REMARK 500 5 SER A 28 78.73 64.95 REMARK 500 5 SER A 31 -87.49 -103.95 REMARK 500 5 ASN A 41 -56.93 -154.57 REMARK 500 5 THR A 92 21.47 -157.71 REMARK 500 6 THR A 9 10.92 -143.63 REMARK 500 6 SER A 28 78.08 71.33 REMARK 500 6 SER A 31 -87.77 -102.69 REMARK 500 6 ASN A 41 -81.62 -152.01 REMARK 500 7 PRO A 25 -179.29 -67.23 REMARK 500 7 SER A 28 58.59 -99.00 REMARK 500 7 SER A 31 -84.65 -110.52 REMARK 500 7 ASN A 41 -69.18 -150.58 REMARK 500 7 VAL A 43 51.36 -115.69 REMARK 500 8 GLU A 10 50.28 -117.93 REMARK 500 8 HIS A 29 -44.84 -169.73 REMARK 500 8 SER A 31 -87.29 -113.06 REMARK 500 8 ASN A 41 -50.06 -164.65 REMARK 500 9 SER A 13 82.11 -159.73 REMARK 500 REMARK 500 THIS ENTRY HAS 143 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 6 PHE A 7 10 -148.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 9 TYR A 69 0.07 SIDE CHAIN REMARK 500 10 TYR A 33 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 1OWW A 0 93 UNP P02751 FINC_HUMAN 608 701 SEQADV 1OWW GLY A -4 UNP P02751 CLONING ARTIFACT SEQADV 1OWW PRO A -3 UNP P02751 CLONING ARTIFACT SEQADV 1OWW LEU A -2 UNP P02751 CLONING ARTIFACT SEQADV 1OWW GLY A -1 UNP P02751 CLONING ARTIFACT SEQRES 1 A 98 GLY PRO LEU GLY SER SER GLY PRO VAL GLU VAL PHE ILE SEQRES 2 A 98 THR GLU THR PRO SER GLN PRO ASN SER HIS PRO ILE GLN SEQRES 3 A 98 TRP ASN ALA PRO GLN PRO SER HIS ILE SER LYS TYR ILE SEQRES 4 A 98 LEU ARG TRP ARG PRO LYS ASN SER VAL GLY ARG TRP LYS SEQRES 5 A 98 GLU ALA THR ILE PRO GLY HIS LEU ASN SER TYR THR ILE SEQRES 6 A 98 LYS GLY LEU LYS PRO GLY VAL VAL TYR GLU GLY GLN LEU SEQRES 7 A 98 ILE SER ILE GLN GLN TYR GLY HIS GLN GLU VAL THR ARG SEQRES 8 A 98 PHE ASP PHE THR THR THR SER SHEET 1 A 3 GLU A 5 PHE A 7 0 SHEET 2 A 3 HIS A 18 ASN A 23 -1 O ASN A 23 N GLU A 5 SHEET 3 A 3 SER A 57 ILE A 60 -1 O ILE A 60 N HIS A 18 SHEET 1 B 4 LYS A 47 ILE A 51 0 SHEET 2 B 4 ILE A 30 PRO A 39 -1 N LEU A 35 O ALA A 49 SHEET 3 B 4 VAL A 67 GLN A 77 -1 O ILE A 74 N ILE A 34 SHEET 4 B 4 GLN A 82 THR A 91 -1 O GLU A 83 N SER A 75 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1