HEADER TRANSFERASE 04-APR-03 1OYG TITLE CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LEVANSUCRASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEVANSUCRASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-D-FRUCTOFURANOSYL TRANSFERASE, SUCROSE 6-FRUCTOSYL COMPND 5 TRANSFERASE; COMPND 6 EC: 2.4.1.10; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: SACB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11C-SACBBS KEYWDS GLYCOSIDE HYDROLASE, LEVANSUCRASE, BETA-PROPELLER, LEVAN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.MENG,K.FUTTERER REVDAT 5 14-FEB-24 1OYG 1 REMARK SEQADV LINK REVDAT 4 13-JUL-11 1OYG 1 VERSN REVDAT 3 24-FEB-09 1OYG 1 VERSN REVDAT 2 04-NOV-03 1OYG 1 JRNL REVDAT 1 14-OCT-03 1OYG 0 JRNL AUTH G.MENG,K.FUTTERER JRNL TITL STRUCTURAL FRAMEWORK OF FRUCTOSYL TRANSFER IN BACILLUS JRNL TITL 2 SUBTILIS LEVANSUCRASE JRNL REF NAT.STRUCT.BIOL. V. 10 935 2003 JRNL REFN ISSN 1072-8368 JRNL PMID 14517548 JRNL DOI 10.1038/NSB974 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.19 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 64231 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3386 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.58 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9237 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1580 REMARK 3 BIN FREE R VALUE SET COUNT : 497 REMARK 3 BIN FREE R VALUE : 0.1670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3442 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 366 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 9.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 4.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.34000 REMARK 3 B22 (A**2) : 0.07000 REMARK 3 B33 (A**2) : 0.27000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.066 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.038 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.960 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3538 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2981 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4778 ; 1.078 ; 1.936 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6986 ; 0.730 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 439 ; 6.285 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 516 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3982 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 705 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 597 ; 0.197 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 3520 ; 0.236 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1910 ; 0.080 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 18 ; 0.135 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 46 ; 0.252 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2178 ; 0.291 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3505 ; 0.567 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1360 ; 1.059 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1273 ; 1.656 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 34 A 473 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2858 29.8237 15.2957 REMARK 3 T TENSOR REMARK 3 T11: 0.0152 T22: 0.0105 REMARK 3 T33: 0.0274 T12: 0.0118 REMARK 3 T13: -0.0042 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.4757 L22: 0.3416 REMARK 3 L33: 0.5204 L12: 0.0205 REMARK 3 L13: 0.0125 L23: 0.0490 REMARK 3 S TENSOR REMARK 3 S11: -0.0171 S12: -0.0367 S13: 0.0325 REMARK 3 S21: 0.0294 S22: 0.0150 S23: 0.0067 REMARK 3 S31: -0.0391 S32: 0.0018 S33: 0.0021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE THERMAL DISPLACEMENT PARAMETERS OF CHAIN A REFLECT THE REMARK 3 RESIDUAL B FACTOR AND DOES NOT INCLUDE THE TLS CORRECTION. REMARK 4 REMARK 4 1OYG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-02 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67836 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.55500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.84050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.50700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.84050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.55500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.50700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 27 REMARK 465 SER A 28 REMARK 465 MET A 29 REMARK 465 LYS A 30 REMARK 465 GLU A 31 REMARK 465 THR A 32 REMARK 465 ASN A 33 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 34 CG CD OE1 NE2 REMARK 470 LYS A 35 CG CD CE NZ REMARK 470 GLU A 61 CG CD OE1 OE2 REMARK 470 LYS A 80 CE NZ REMARK 470 LYS A 114 CD CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 HIS A 186 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 223 CE NZ REMARK 470 GLU A 275 CD OE1 OE2 REMARK 470 ARG A 291 NH1 NH2 REMARK 470 LYS A 296 CE NZ REMARK 470 LYS A 439 CD CE NZ REMARK 470 LYS A 452 CG CD CE NZ REMARK 470 LYS A 454 CD CE NZ REMARK 470 ASN A 472 OD1 ND2 REMARK 470 LYS A 473 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 85 -121.83 -116.49 REMARK 500 HIS A 186 55.23 -119.45 REMARK 500 ASN A 236 -128.84 39.42 REMARK 500 LEU A 245 83.39 -161.46 REMARK 500 LYS A 285 -71.68 69.73 REMARK 500 ASN A 310 47.36 -149.82 REMARK 500 THR A 336 -23.74 72.10 REMARK 500 LYS A 393 -30.91 71.43 REMARK 500 VAL A 397 -50.99 -122.11 REMARK 500 THR A 431 124.28 80.36 REMARK 500 LEU A 464 -168.22 -110.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 500 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 241 OD1 REMARK 620 2 GLN A 272 OE1 84.3 REMARK 620 3 LEU A 308 O 100.9 92.3 REMARK 620 4 ASN A 310 OD1 159.7 77.4 88.7 REMARK 620 5 ASP A 339 OD1 126.9 148.6 80.4 72.0 REMARK 620 6 ASP A 339 OD2 76.4 158.4 81.9 123.0 51.0 REMARK 620 7 HOH A 532 O 84.6 99.2 167.7 89.7 87.5 88.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 507 DBREF 1OYG A 30 473 UNP P05655 SACB_BACSU 30 473 SEQADV 1OYG ALA A 27 UNP P05655 CLONING ARTIFACT SEQADV 1OYG SER A 28 UNP P05655 CLONING ARTIFACT SEQADV 1OYG MET A 29 UNP P05655 CLONING ARTIFACT SEQRES 1 A 447 ALA SER MET LYS GLU THR ASN GLN LYS PRO TYR LYS GLU SEQRES 2 A 447 THR TYR GLY ILE SER HIS ILE THR ARG HIS ASP MET LEU SEQRES 3 A 447 GLN ILE PRO GLU GLN GLN LYS ASN GLU LYS TYR GLN VAL SEQRES 4 A 447 PRO GLU PHE ASP SER SER THR ILE LYS ASN ILE SER SER SEQRES 5 A 447 ALA LYS GLY LEU ASP VAL TRP ASP SER TRP PRO LEU GLN SEQRES 6 A 447 ASN ALA ASP GLY THR VAL ALA ASN TYR HIS GLY TYR HIS SEQRES 7 A 447 ILE VAL PHE ALA LEU ALA GLY ASP PRO LYS ASN ALA ASP SEQRES 8 A 447 ASP THR SER ILE TYR MET PHE TYR GLN LYS VAL GLY GLU SEQRES 9 A 447 THR SER ILE ASP SER TRP LYS ASN ALA GLY ARG VAL PHE SEQRES 10 A 447 LYS ASP SER ASP LYS PHE ASP ALA ASN ASP SER ILE LEU SEQRES 11 A 447 LYS ASP GLN THR GLN GLU TRP SER GLY SER ALA THR PHE SEQRES 12 A 447 THR SER ASP GLY LYS ILE ARG LEU PHE TYR THR ASP PHE SEQRES 13 A 447 SER GLY LYS HIS TYR GLY LYS GLN THR LEU THR THR ALA SEQRES 14 A 447 GLN VAL ASN VAL SER ALA SER ASP SER SER LEU ASN ILE SEQRES 15 A 447 ASN GLY VAL GLU ASP TYR LYS SER ILE PHE ASP GLY ASP SEQRES 16 A 447 GLY LYS THR TYR GLN ASN VAL GLN GLN PHE ILE ASP GLU SEQRES 17 A 447 GLY ASN TYR SER SER GLY ASP ASN HIS THR LEU ARG ASP SEQRES 18 A 447 PRO HIS TYR VAL GLU ASP LYS GLY HIS LYS TYR LEU VAL SEQRES 19 A 447 PHE GLU ALA ASN THR GLY THR GLU ASP GLY TYR GLN GLY SEQRES 20 A 447 GLU GLU SER LEU PHE ASN LYS ALA TYR TYR GLY LYS SER SEQRES 21 A 447 THR SER PHE PHE ARG GLN GLU SER GLN LYS LEU LEU GLN SEQRES 22 A 447 SER ASP LYS LYS ARG THR ALA GLU LEU ALA ASN GLY ALA SEQRES 23 A 447 LEU GLY MET ILE GLU LEU ASN ASP ASP TYR THR LEU LYS SEQRES 24 A 447 LYS VAL MET LYS PRO LEU ILE ALA SER ASN THR VAL THR SEQRES 25 A 447 ASP GLU ILE GLU ARG ALA ASN VAL PHE LYS MET ASN GLY SEQRES 26 A 447 LYS TRP TYR LEU PHE THR ASP SER ARG GLY SER LYS MET SEQRES 27 A 447 THR ILE ASP GLY ILE THR SER ASN ASP ILE TYR MET LEU SEQRES 28 A 447 GLY TYR VAL SER ASN SER LEU THR GLY PRO TYR LYS PRO SEQRES 29 A 447 LEU ASN LYS THR GLY LEU VAL LEU LYS MET ASP LEU ASP SEQRES 30 A 447 PRO ASN ASP VAL THR PHE THR TYR SER HIS PHE ALA VAL SEQRES 31 A 447 PRO GLN ALA LYS GLY ASN ASN VAL VAL ILE THR SER TYR SEQRES 32 A 447 MET THR ASN ARG GLY PHE TYR ALA ASP LYS GLN SER THR SEQRES 33 A 447 PHE ALA PRO SER PHE LEU LEU ASN ILE LYS GLY LYS LYS SEQRES 34 A 447 THR SER VAL VAL LYS ASP SER ILE LEU GLU GLN GLY GLN SEQRES 35 A 447 LEU THR VAL ASN LYS HET CA A 500 1 HET EDO A 501 4 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HETNAM CA CALCIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CA CA 2+ FORMUL 3 EDO 7(C2 H6 O2) FORMUL 10 HOH *366(H2 O) HELIX 1 1 THR A 47 GLN A 53 1 7 HELIX 2 2 GLN A 53 GLN A 58 1 6 HELIX 3 3 LYS A 59 GLN A 64 5 6 HELIX 4 4 ASP A 69 ILE A 73 5 5 HELIX 5 5 ILE A 76 LYS A 80 5 5 HELIX 6 6 SER A 132 TRP A 136 5 5 HELIX 7 7 SER A 146 ALA A 151 1 6 HELIX 8 8 ILE A 155 GLN A 159 5 5 HELIX 9 9 ASN A 227 GLY A 235 1 9 HELIX 10 10 ASN A 236 GLY A 240 5 5 HELIX 11 11 GLY A 273 TYR A 283 5 11 HELIX 12 12 SER A 286 SER A 300 1 15 HELIX 13 13 LYS A 302 ALA A 309 1 8 HELIX 14 14 SER A 362 MET A 364 5 3 HELIX 15 15 ASN A 392 THR A 394 5 3 SHEET 1 A 5 SER A 44 HIS A 45 0 SHEET 2 A 5 LEU A 324 ALA A 333 1 O ALA A 333 N SER A 44 SHEET 3 A 5 GLY A 311 LEU A 318 -1 N GLU A 317 O LYS A 325 SHEET 4 A 5 HIS A 256 ASN A 264 -1 N LYS A 257 O LEU A 318 SHEET 5 A 5 ARG A 246 ASP A 253 -1 N HIS A 249 O VAL A 260 SHEET 1 B 8 LYS A 137 ARG A 141 0 SHEET 2 B 8 SER A 120 LYS A 127 -1 N TYR A 125 O LYS A 137 SHEET 3 B 8 TYR A 103 GLY A 111 -1 N VAL A 106 O PHE A 124 SHEET 4 B 8 ASP A 83 GLN A 91 -1 N TRP A 88 O PHE A 107 SHEET 5 B 8 GLN A 161 PHE A 169 1 O ALA A 167 N GLN A 91 SHEET 6 B 8 ILE A 175 SER A 183 -1 O THR A 180 N TRP A 163 SHEET 7 B 8 LYS A 189 ALA A 201 -1 O ALA A 195 N LEU A 177 SHEET 8 B 8 LEU A 206 PHE A 218 -1 O ILE A 217 N LEU A 192 SHEET 1 C 4 GLU A 342 MET A 349 0 SHEET 2 C 4 LYS A 352 ARG A 360 -1 O ASP A 358 N GLU A 342 SHEET 3 C 4 ILE A 374 SER A 381 -1 O SER A 381 N TRP A 353 SHEET 4 C 4 LYS A 389 PRO A 390 -1 O LYS A 389 N VAL A 380 SHEET 1 D 4 GLU A 342 MET A 349 0 SHEET 2 D 4 LYS A 352 ARG A 360 -1 O ASP A 358 N GLU A 342 SHEET 3 D 4 ILE A 374 SER A 381 -1 O SER A 381 N TRP A 353 SHEET 4 D 4 LEU A 396 MET A 400 -1 O MET A 400 N ILE A 374 SHEET 1 E 3 THR A 410 VAL A 416 0 SHEET 2 E 3 ASN A 423 MET A 430 -1 O VAL A 425 N VAL A 416 SHEET 3 E 3 THR A 442 PHE A 443 -1 O THR A 442 N MET A 430 SHEET 1 F 4 THR A 410 VAL A 416 0 SHEET 2 F 4 ASN A 423 MET A 430 -1 O VAL A 425 N VAL A 416 SHEET 3 F 4 PHE A 447 LYS A 452 -1 O PHE A 447 N ILE A 426 SHEET 4 F 4 LYS A 455 VAL A 458 -1 O SER A 457 N ASN A 450 LINK OD1 ASP A 241 CA CA A 500 1555 1555 2.35 LINK OE1 GLN A 272 CA CA A 500 1555 1555 2.31 LINK O LEU A 308 CA CA A 500 1555 1555 2.33 LINK OD1 ASN A 310 CA CA A 500 1555 1555 2.37 LINK OD1 ASP A 339 CA CA A 500 1555 1555 2.46 LINK OD2 ASP A 339 CA CA A 500 1555 1555 2.51 LINK CA CA A 500 O HOH A 532 1555 1555 2.36 CISPEP 1 GLY A 386 PRO A 387 0 2.39 SITE 1 AC1 6 ASP A 241 GLN A 272 LEU A 308 ASN A 310 SITE 2 AC1 6 ASP A 339 HOH A 532 SITE 1 AC2 5 ASP A 94 ALA A 151 ASN A 152 EDO A 502 SITE 2 AC2 5 HOH A 584 SITE 1 AC3 9 ASP A 94 ASN A 152 GLU A 252 ASP A 253 SITE 2 AC3 9 LYS A 348 EDO A 501 HOH A 525 HOH A 578 SITE 3 AC3 9 HOH A 850 SITE 1 AC4 7 HIS A 104 GLN A 126 GLY A 129 GLU A 130 SITE 2 AC4 7 THR A 470 ASN A 472 HOH A 572 SITE 1 AC5 4 ASN A 242 ARG A 246 GLU A 340 LYS A 363 SITE 1 AC6 5 ASN A 450 LYS A 452 LYS A 455 THR A 456 SITE 2 AC6 5 SER A 457 SITE 1 AC7 9 GLN A 229 ALA A 419 LYS A 420 VAL A 471 SITE 2 AC7 9 ASN A 472 HOH A 635 HOH A 659 HOH A 792 SITE 3 AC7 9 HOH A 835 SITE 1 AC8 6 PHE A 169 ILE A 217 THR A 323 LEU A 324 SITE 2 AC8 6 HOH A 681 HOH A 871 CRYST1 51.110 67.014 123.681 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019566 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014922 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008085 0.00000