HEADER OXIDOREDUCTASE 14-APR-03 1P1V TITLE CRYSTAL STRUCTURE OF FALS-ASSOCIATED HUMAN COPPER-ZINC SUPEROXIDE TITLE 2 DISMUTASE (CUZNSOD) MUTANT D125H TO 1.4A COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUPEROXIDE DISMUTASE [CU-ZN]; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 1.15.1.1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SOD1; SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: EG118; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: YEP351 KEYWDS BETA-BARREL, BOUND ANION AT COPPER SITE, CUZNSOD PEROXIDATION KEYWDS 2 MECHANISM, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.S.ELAM,K.MALEK,J.A.RODRIGUEZ,P.A.DOUCETTE,A.B.TAYLOR,L.J.HAYWARD, AUTHOR 2 D.E.CABELLI,J.S.VALENTINE,P.J.HART REVDAT 3 27-OCT-21 1P1V 1 REMARK SEQADV LINK REVDAT 2 24-FEB-09 1P1V 1 VERSN REVDAT 1 26-AUG-03 1P1V 0 JRNL AUTH J.S.ELAM,K.MALEK,J.A.RODRIGUEZ,P.A.DOUCETTE,A.B.TAYLOR, JRNL AUTH 2 L.J.HAYWARD,D.E.CABELLI,J.S.VALENTINE,P.J.HART JRNL TITL AN ALTERNATIVE MECHANISM OF BICARBONATE-MEDIATED JRNL TITL 2 PEROXIDATION BY COPPER-ZINC SUPEROXIDE DISMUTASE: RATES JRNL TITL 3 ENHANCED VIA PROPOSED ENZYME-ASSOCIATED PEROXYCARBONATE JRNL TITL 4 INTERMEDIATE JRNL REF J.BIOL.CHEM. V. 278 21032 2003 JRNL REFN ISSN 0021-9258 JRNL PMID 12649272 JRNL DOI 10.1074/JBC.M300484200 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 10.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 3 CROSS-VALIDATION METHOD : FREE R REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.147 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.146 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 2899 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 94875 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.133 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE (F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : NULL REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : NULL REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 78424 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3180 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 736 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 3936.0 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 0.00 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 0 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 35428 REMARK 3 NUMBER OF RESTRAINTS : 41292 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 ANGLE DISTANCES (A) : 0.028 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.000 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.030 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.055 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.071 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.015 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.004 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.053 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.083 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: ANISOTROPIC REFINEMENT REDUCED FREE R REMARK 3 (NO CUTOFF) BY 4.1% REMARK 4 REMARK 4 1P1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-03. REMARK 100 THE DEPOSITION ID IS D_1000018909. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUN-01; 07-JUN-01 REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : NSLS; NSLS REMARK 200 BEAMLINE : X12B; X8C REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000; 1.2811 REMARK 200 MONOCHROMATOR : MIRRORS; MIRRORS REMARK 200 OPTICS : MIRRORS; MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4; ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95234 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 6.910 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 30.1600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.42600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.620 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ZINC SULFATE, PEG MME 550, MES, PH REMARK 280 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.54000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.54000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 71.54000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.57000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 71.54000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 35.22450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.57000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A HOMODIMER. IN THE ASYMMETRIC REMARK 300 UNIT WE HAVE ONE HOMODIMER AND ONE MONOMER. THE MONOMER'S DIMERIC REMARK 300 PARTNER IS GENERATED THROUGH A CRYSTALLOGRAPHIC TWO FOLD AXIS AT REMARK 300 THE DIMER INTERFACE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -129.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -70.44900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 71.54000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1057 LIES ON A SPECIAL POSITION. REMARK 375 HOH C1086 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 129 REMARK 465 GLY A 130 REMARK 465 ASN A 131 REMARK 465 GLU A 132 REMARK 465 GLU A 133 REMARK 465 SER A 134 REMARK 465 THR A 135 REMARK 465 LYS B 128 REMARK 465 GLY B 129 REMARK 465 GLY B 130 REMARK 465 ASN B 131 REMARK 465 GLU B 132 REMARK 465 GLU B 133 REMARK 465 SER B 134 REMARK 465 THR B 135 REMARK 465 LYS B 136 REMARK 465 GLY C 129 REMARK 465 GLY C 130 REMARK 465 ASN C 131 REMARK 465 GLU C 132 REMARK 465 GLU C 133 REMARK 465 SER C 134 REMARK 465 THR C 135 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 79 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 83 CB - CG - OD1 ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP B 96 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG B 115 NE - CZ - NH2 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG C 69 CD - NE - CZ ANGL. DEV. = 9.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 65 59.98 -147.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 46 ND1 REMARK 620 2 HIS A 48 NE2 119.8 REMARK 620 3 HIS A 120 NE2 101.3 125.2 REMARK 620 4 SO4 A 801 O1 102.9 100.4 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 63 ND1 REMARK 620 2 HIS A 71 ND1 102.2 REMARK 620 3 HIS A 80 ND1 107.9 123.2 REMARK 620 4 ASP A 83 OD1 105.2 98.1 118.0 REMARK 620 5 ASP A 83 OD2 157.1 79.8 89.1 52.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 46 ND1 REMARK 620 2 HIS B 48 NE2 113.9 REMARK 620 3 HIS B 120 NE2 98.9 125.9 REMARK 620 4 SO4 B 802 O2 98.8 105.6 110.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 204 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 63 ND1 REMARK 620 2 HIS B 71 ND1 104.1 REMARK 620 3 HIS B 80 ND1 99.3 122.8 REMARK 620 4 ASP B 83 OD1 109.8 97.5 122.2 REMARK 620 5 ASP B 83 OD2 163.2 78.6 92.8 53.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 205 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 46 ND1 REMARK 620 2 HIS C 48 NE2 119.3 REMARK 620 3 HIS C 120 NE2 100.4 125.6 REMARK 620 4 SO4 C 803 O1 102.3 102.0 104.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 63 ND1 REMARK 620 2 HIS C 71 ND1 105.7 REMARK 620 3 HIS C 80 ND1 107.7 122.3 REMARK 620 4 ASP C 83 OD1 104.2 99.4 115.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AZV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT G37R REMARK 900 RELATED ID: 1OZU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT S134N REMARK 900 RELATED ID: 1OZT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT APO-H46R REMARK 900 RELATED ID: 1OEZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FALS-ASSOCIATED COPPER-ZINC SUPEROXIDE REMARK 900 DISMUTASE (CUZNSOD) MUTANT ZN-LOADED H46R DBREF 1P1V A 1 153 UNP P00441 SODC_HUMAN 1 153 DBREF 1P1V B 1 153 UNP P00441 SODC_HUMAN 1 153 DBREF 1P1V C 1 153 UNP P00441 SODC_HUMAN 1 153 SEQADV 1P1V CSX A 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS A 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQADV 1P1V CSX B 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS B 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQADV 1P1V CSX C 111 UNP P00441 CYS 111 MODIFIED RESIDUE SEQADV 1P1V HIS C 125 UNP P00441 ASP 125 ENGINEERED MUTATION SEQRES 1 A 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 A 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 A 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 A 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 A 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 A 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 A 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 A 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 A 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 A 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 A 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 A 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 B 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 B 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 B 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 B 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 B 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 B 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 B 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 B 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 B 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 B 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 B 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 B 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN SEQRES 1 C 153 ALA THR LYS ALA VAL CYS VAL LEU LYS GLY ASP GLY PRO SEQRES 2 C 153 VAL GLN GLY ILE ILE ASN PHE GLU GLN LYS GLU SER ASN SEQRES 3 C 153 GLY PRO VAL LYS VAL TRP GLY SER ILE LYS GLY LEU THR SEQRES 4 C 153 GLU GLY LEU HIS GLY PHE HIS VAL HIS GLU PHE GLY ASP SEQRES 5 C 153 ASN THR ALA GLY CYS THR SER ALA GLY PRO HIS PHE ASN SEQRES 6 C 153 PRO LEU SER ARG LYS HIS GLY GLY PRO LYS ASP GLU GLU SEQRES 7 C 153 ARG HIS VAL GLY ASP LEU GLY ASN VAL THR ALA ASP LYS SEQRES 8 C 153 ASP GLY VAL ALA ASP VAL SER ILE GLU ASP SER VAL ILE SEQRES 9 C 153 SER LEU SER GLY ASP HIS CSX ILE ILE GLY ARG THR LEU SEQRES 10 C 153 VAL VAL HIS GLU LYS ALA ASP HIS LEU GLY LYS GLY GLY SEQRES 11 C 153 ASN GLU GLU SER THR LYS THR GLY ASN ALA GLY SER ARG SEQRES 12 C 153 LEU ALA CYS GLY VAL ILE GLY ILE ALA GLN MODRES 1P1V CSX A 111 CYS S-OXY CYSTEINE MODRES 1P1V CSX B 111 CYS S-OXY CYSTEINE MODRES 1P1V CSX C 111 CYS S-OXY CYSTEINE HET CSX A 111 7 HET CSX B 111 7 HET CSX C 111 7 HET SO4 A 801 5 HET ZN A 201 1 HET ZN A 202 1 HET SO4 B 802 5 HET ZN B 203 1 HET ZN B 204 1 HET SO4 C 803 5 HET ZN C 205 1 HET ZN C 206 1 HETNAM CSX S-OXY CYSTEINE HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION FORMUL 1 CSX 3(C3 H7 N O3 S) FORMUL 4 SO4 3(O4 S 2-) FORMUL 5 ZN 6(ZN 2+) FORMUL 13 HOH *736(H2 O) HELIX 1 1 CYS A 57 GLY A 61 5 5 HELIX 2 2 SER A 107 CSX A 111 5 5 HELIX 3 3 ALA B 55 GLY B 61 5 7 HELIX 4 4 CYS C 57 GLY C 61 5 5 HELIX 5 5 SER C 107 CSX C 111 5 5 SHEET 1 A 5 ALA A 95 ASP A 101 0 SHEET 2 A 5 VAL A 29 LYS A 36 -1 N ILE A 35 O ALA A 95 SHEET 3 A 5 GLN A 15 GLU A 21 -1 N ASN A 19 O TRP A 32 SHEET 4 A 5 LYS A 3 LEU A 8 -1 N ALA A 4 O PHE A 20 SHEET 5 A 5 GLY A 150 ILE A 151 -1 O GLY A 150 N VAL A 5 SHEET 1 B 4 ASP A 83 ALA A 89 0 SHEET 2 B 4 GLY A 41 HIS A 48 -1 N GLY A 41 O ALA A 89 SHEET 3 B 4 THR A 116 HIS A 120 -1 O THR A 116 N HIS A 48 SHEET 4 B 4 ARG A 143 VAL A 148 -1 O ALA A 145 N VAL A 119 SHEET 1 C 5 ALA B 95 ASP B 101 0 SHEET 2 C 5 VAL B 29 LYS B 36 -1 N ILE B 35 O ALA B 95 SHEET 3 C 5 GLN B 15 GLN B 22 -1 N ASN B 19 O TRP B 32 SHEET 4 C 5 THR B 2 LEU B 8 -1 N THR B 2 O GLN B 22 SHEET 5 C 5 GLY B 150 ALA B 152 -1 O GLY B 150 N VAL B 5 SHEET 1 D 4 ASP B 83 ALA B 89 0 SHEET 2 D 4 GLY B 41 HIS B 48 -1 N GLY B 41 O ALA B 89 SHEET 3 D 4 THR B 116 HIS B 120 -1 O THR B 116 N HIS B 48 SHEET 4 D 4 ARG B 143 VAL B 148 -1 O ALA B 145 N VAL B 119 SHEET 1 E 5 ALA C 95 ASP C 101 0 SHEET 2 E 5 VAL C 29 LYS C 36 -1 N ILE C 35 O ALA C 95 SHEET 3 E 5 GLN C 15 GLU C 21 -1 N GLU C 21 O LYS C 30 SHEET 4 E 5 LYS C 3 LEU C 8 -1 N LEU C 8 O GLY C 16 SHEET 5 E 5 GLY C 150 ILE C 151 -1 O GLY C 150 N VAL C 5 SHEET 1 F 4 ASP C 83 ALA C 89 0 SHEET 2 F 4 GLY C 41 HIS C 48 -1 N GLY C 41 O ALA C 89 SHEET 3 F 4 THR C 116 HIS C 120 -1 O THR C 116 N HIS C 48 SHEET 4 F 4 ARG C 143 VAL C 148 -1 O GLY C 147 N LEU C 117 SSBOND 1 CYS A 57 CYS A 146 1555 1555 2.10 SSBOND 2 CYS B 57 CYS B 146 1555 1555 2.06 SSBOND 3 CYS C 57 CYS C 146 1555 1555 2.12 LINK C HIS A 110 N CSX A 111 1555 1555 1.33 LINK C CSX A 111 N ILE A 112 1555 1555 1.33 LINK C HIS B 110 N CSX B 111 1555 1555 1.32 LINK C CSX B 111 N ILE B 112 1555 1555 1.35 LINK C HIS C 110 N CSX C 111 1555 1555 1.33 LINK C CSX C 111 N ILE C 112 1555 1555 1.35 LINK ND1 HIS A 46 ZN ZN A 201 1555 1555 2.01 LINK NE2 HIS A 48 ZN ZN A 201 1555 1555 2.02 LINK ND1 HIS A 63 ZN ZN A 202 1555 1555 2.02 LINK ND1 HIS A 71 ZN ZN A 202 1555 1555 2.04 LINK ND1 HIS A 80 ZN ZN A 202 1555 1555 2.03 LINK OD1 ASP A 83 ZN ZN A 202 1555 1555 1.95 LINK OD2 ASP A 83 ZN ZN A 202 1555 1555 2.75 LINK NE2 HIS A 120 ZN ZN A 201 1555 1555 2.03 LINK ZN ZN A 201 O1 SO4 A 801 1555 1555 1.95 LINK ND1 HIS B 46 ZN ZN B 203 1555 1555 2.04 LINK NE2 HIS B 48 ZN ZN B 203 1555 1555 2.02 LINK ND1 HIS B 63 ZN ZN B 204 1555 1555 2.05 LINK ND1 HIS B 71 ZN ZN B 204 1555 1555 2.07 LINK ND1 HIS B 80 ZN ZN B 204 1555 1555 2.01 LINK OD1 ASP B 83 ZN ZN B 204 1555 1555 1.76 LINK OD2 ASP B 83 ZN ZN B 204 1555 1555 2.65 LINK NE2 HIS B 120 ZN ZN B 203 1555 1555 1.92 LINK ZN ZN B 203 O2 SO4 B 802 1555 1555 1.92 LINK ND1 HIS C 46 ZN ZN C 205 1555 1555 2.02 LINK NE2 HIS C 48 ZN ZN C 205 1555 1555 2.02 LINK ND1 HIS C 63 ZN ZN C 206 1555 1555 2.03 LINK ND1 HIS C 71 ZN ZN C 206 1555 1555 2.02 LINK ND1 HIS C 80 ZN ZN C 206 1555 1555 1.98 LINK OD1 ASP C 83 ZN ZN C 206 1555 1555 1.96 LINK NE2 HIS C 120 ZN ZN C 205 1555 1555 2.03 LINK ZN ZN C 205 O1 SO4 C 803 1555 1555 1.95 SITE 1 AC1 12 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 2 AC1 12 THR A 137 ARG A 143 ZN A 201 HOH A 823 SITE 3 AC1 12 HOH A 852 HOH A 868 HOH A 877 ASN C 26 SITE 1 AC2 10 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 2 AC2 10 THR B 137 ARG B 143 ZN B 203 HOH B 881 SITE 3 AC2 10 HOH B 897 HOH B 899 SITE 1 AC3 12 ASN A 26 HIS C 46 HIS C 48 HIS C 63 SITE 2 AC3 12 HIS C 120 THR C 137 ARG C 143 ZN C 205 SITE 3 AC3 12 HOH C 819 HOH C 826 HOH C 838 HOH C 862 SITE 1 AC4 5 HIS A 46 HIS A 48 HIS A 63 HIS A 120 SITE 2 AC4 5 SO4 A 801 SITE 1 AC5 4 HIS A 63 HIS A 71 HIS A 80 ASP A 83 SITE 1 AC6 5 HIS B 46 HIS B 48 HIS B 63 HIS B 120 SITE 2 AC6 5 SO4 B 802 SITE 1 AC7 4 HIS B 63 HIS B 71 HIS B 80 ASP B 83 SITE 1 AC8 5 HIS C 46 HIS C 48 HIS C 63 HIS C 120 SITE 2 AC8 5 SO4 C 803 SITE 1 AC9 4 HIS C 63 HIS C 71 HIS C 80 ASP C 83 CRYST1 70.449 101.140 143.080 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014195 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009887 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006989 0.00000