data_1P8T # _entry.id 1P8T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1P8T RCSB RCSB019151 WWPDB D_1000019151 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P8T _pdbx_database_status.recvd_initial_deposition_date 2003-05-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Barton, W.A.' 1 'Liu, B.P.' 2 'Tzvetkova, D.' 3 'Jeffrey, P.D.' 4 'Fournier, A.E.' 5 'Sah, D.' 6 'Cate, R.' 7 'Strittmatter, S.M.' 8 'Nikolov, D.B.' 9 # _citation.id primary _citation.title 'Structure and axon outgrowth inhibitor binding of the Nogo-66 receptor and related proteins' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 22 _citation.page_first 3291 _citation.page_last 3302 _citation.year 2003 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12839991 _citation.pdbx_database_id_DOI 10.1093/emboj/cdg325 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Barton, W.A.' 1 ? primary 'Liu, B.P.' 2 ? primary 'Tzvetkova, D.' 3 ? primary 'Jeffrey, P.D.' 4 ? primary 'Fournier, A.E.' 5 ? primary 'Sah, D.' 6 ? primary 'Cate, R.' 7 ? primary 'Strittmatter, S.M.' 8 ? primary 'Nikolov, D.B.' 9 ? # _cell.entry_id 1P8T _cell.length_a 123.958 _cell.length_b 123.958 _cell.length_c 120.173 _cell.angle_alpha 90.0 _cell.angle_beta 90.0 _cell.angle_gamma 120.0 _cell.pdbx_unique_axis ? _cell.Z_PDB 6 # _symmetry.entry_id 1P8T _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 152 _symmetry.cell_setting ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Reticulon 4 receptor' 31615.391 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 non-polymer man 2-acetamido-2-deoxy-alpha-D-glucopyranose 221.208 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Nogo receptor, NgR, Nogo-66 receptor' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC RARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGCAV ; _entity_poly.pdbx_seq_one_letter_code_can ;CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC RARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGCAV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CYS n 1 2 PRO n 1 3 GLY n 1 4 ALA n 1 5 CYS n 1 6 VAL n 1 7 CYS n 1 8 TYR n 1 9 ASN n 1 10 GLU n 1 11 PRO n 1 12 LYS n 1 13 VAL n 1 14 THR n 1 15 THR n 1 16 SER n 1 17 CYS n 1 18 PRO n 1 19 GLN n 1 20 GLN n 1 21 GLY n 1 22 LEU n 1 23 GLN n 1 24 ALA n 1 25 VAL n 1 26 PRO n 1 27 VAL n 1 28 GLY n 1 29 ILE n 1 30 PRO n 1 31 ALA n 1 32 ALA n 1 33 SER n 1 34 GLN n 1 35 ARG n 1 36 ILE n 1 37 PHE n 1 38 LEU n 1 39 HIS n 1 40 GLY n 1 41 ASN n 1 42 ARG n 1 43 ILE n 1 44 SER n 1 45 HIS n 1 46 VAL n 1 47 PRO n 1 48 ALA n 1 49 ALA n 1 50 SER n 1 51 PHE n 1 52 ARG n 1 53 ALA n 1 54 CYS n 1 55 ARG n 1 56 ASN n 1 57 LEU n 1 58 THR n 1 59 ILE n 1 60 LEU n 1 61 TRP n 1 62 LEU n 1 63 HIS n 1 64 SER n 1 65 ASN n 1 66 VAL n 1 67 LEU n 1 68 ALA n 1 69 ARG n 1 70 ILE n 1 71 ASP n 1 72 ALA n 1 73 ALA n 1 74 ALA n 1 75 PHE n 1 76 THR n 1 77 GLY n 1 78 LEU n 1 79 ALA n 1 80 LEU n 1 81 LEU n 1 82 GLU n 1 83 GLN n 1 84 LEU n 1 85 ASP n 1 86 LEU n 1 87 SER n 1 88 ASP n 1 89 ASN n 1 90 ALA n 1 91 GLN n 1 92 LEU n 1 93 ARG n 1 94 SER n 1 95 VAL n 1 96 ASP n 1 97 PRO n 1 98 ALA n 1 99 THR n 1 100 PHE n 1 101 HIS n 1 102 GLY n 1 103 LEU n 1 104 GLY n 1 105 ARG n 1 106 LEU n 1 107 HIS n 1 108 THR n 1 109 LEU n 1 110 HIS n 1 111 LEU n 1 112 ASP n 1 113 ARG n 1 114 CYS n 1 115 GLY n 1 116 LEU n 1 117 GLN n 1 118 GLU n 1 119 LEU n 1 120 GLY n 1 121 PRO n 1 122 GLY n 1 123 LEU n 1 124 PHE n 1 125 ARG n 1 126 GLY n 1 127 LEU n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 GLN n 1 132 TYR n 1 133 LEU n 1 134 TYR n 1 135 LEU n 1 136 GLN n 1 137 ASP n 1 138 ASN n 1 139 ALA n 1 140 LEU n 1 141 GLN n 1 142 ALA n 1 143 LEU n 1 144 PRO n 1 145 ASP n 1 146 ASP n 1 147 THR n 1 148 PHE n 1 149 ARG n 1 150 ASP n 1 151 LEU n 1 152 GLY n 1 153 ASN n 1 154 LEU n 1 155 THR n 1 156 HIS n 1 157 LEU n 1 158 PHE n 1 159 LEU n 1 160 HIS n 1 161 GLY n 1 162 ASN n 1 163 ARG n 1 164 ILE n 1 165 SER n 1 166 SER n 1 167 VAL n 1 168 PRO n 1 169 GLU n 1 170 ARG n 1 171 ALA n 1 172 PHE n 1 173 ARG n 1 174 GLY n 1 175 LEU n 1 176 HIS n 1 177 SER n 1 178 LEU n 1 179 ASP n 1 180 ARG n 1 181 LEU n 1 182 LEU n 1 183 LEU n 1 184 HIS n 1 185 GLN n 1 186 ASN n 1 187 ARG n 1 188 VAL n 1 189 ALA n 1 190 HIS n 1 191 VAL n 1 192 HIS n 1 193 PRO n 1 194 HIS n 1 195 ALA n 1 196 PHE n 1 197 ARG n 1 198 ASP n 1 199 LEU n 1 200 GLY n 1 201 ARG n 1 202 LEU n 1 203 MET n 1 204 THR n 1 205 LEU n 1 206 TYR n 1 207 LEU n 1 208 PHE n 1 209 ALA n 1 210 ASN n 1 211 ASN n 1 212 LEU n 1 213 SER n 1 214 ALA n 1 215 LEU n 1 216 PRO n 1 217 THR n 1 218 GLU n 1 219 ALA n 1 220 LEU n 1 221 ALA n 1 222 PRO n 1 223 LEU n 1 224 ARG n 1 225 ALA n 1 226 LEU n 1 227 GLN n 1 228 TYR n 1 229 LEU n 1 230 ARG n 1 231 LEU n 1 232 ASN n 1 233 ASP n 1 234 ASN n 1 235 PRO n 1 236 TRP n 1 237 VAL n 1 238 CYS n 1 239 ASP n 1 240 CYS n 1 241 ARG n 1 242 ALA n 1 243 ARG n 1 244 PRO n 1 245 LEU n 1 246 TRP n 1 247 ALA n 1 248 TRP n 1 249 LEU n 1 250 GLN n 1 251 LYS n 1 252 PHE n 1 253 ARG n 1 254 GLY n 1 255 SER n 1 256 SER n 1 257 SER n 1 258 GLU n 1 259 VAL n 1 260 PRO n 1 261 CYS n 1 262 SER n 1 263 LEU n 1 264 PRO n 1 265 GLN n 1 266 ARG n 1 267 LEU n 1 268 ALA n 1 269 GLY n 1 270 ARG n 1 271 ASP n 1 272 LEU n 1 273 LYS n 1 274 ARG n 1 275 LEU n 1 276 ALA n 1 277 ALA n 1 278 ASN n 1 279 ASP n 1 280 LEU n 1 281 GLN n 1 282 GLY n 1 283 CYS n 1 284 ALA n 1 285 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line '293 Cells' _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RTN4R_HUMAN _struct_ref.pdbx_db_accession Q9BZR6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;CPGACVCYNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLAL LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH GNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC RARPLWAWLQKFRGSSSEVPCSLPQRLAGRDLKRLAANDLQGCAV ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1P8T _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 285 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BZR6 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 311 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 27 _struct_ref_seq.pdbx_auth_seq_align_end 311 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1P8T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'NaCl, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.21 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 8-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 8-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.21 # _reflns.entry_id 1P8T _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 35.0 _reflns.number_all ? _reflns.number_obs 34022 _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1P8T _refine.ls_d_res_high 3.2 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 33928 _refine.ls_number_reflns_obs 32616 _refine.ls_number_reflns_R_free 3133 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.266 _refine.ls_R_factor_R_work 0.265 _refine.ls_R_factor_R_free 0.292 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2224 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2254 _refine_hist.d_res_high 3.2 _refine_hist.d_res_low 20.0 # _struct.entry_id 1P8T _struct.title 'Crystal structure of Nogo-66 Receptor' _struct.pdbx_descriptor 'Reticulon 4 receptor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P8T _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'NgR, Nogo-66, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 239 ? ARG A 241 ? ASP A 265 ARG A 267 5 ? 3 HELX_P HELX_P2 2 ALA A 242 ? PHE A 252 ? ALA A 268 PHE A 278 1 ? 11 HELX_P HELX_P3 3 ASP A 271 ? LEU A 275 ? ASP A 297 LEU A 301 5 ? 5 HELX_P HELX_P4 4 ALA A 276 ? LEU A 280 ? ALA A 302 LEU A 306 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 1 SG ? ? ? 1_555 A CYS 7 SG ? ? A CYS 27 A CYS 33 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 17 SG ? ? A CYS 31 A CYS 43 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf3 disulf ? ? A CYS 238 SG ? ? ? 1_555 A CYS 261 SG ? ? A CYS 264 A CYS 287 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 240 SG ? ? ? 1_555 A CYS 283 SG ? ? A CYS 266 A CYS 309 1_555 ? ? ? ? ? ? ? 2.050 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 263 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 289 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 264 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 290 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.67 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 9 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel B 1 2 ? parallel C 1 2 ? parallel D 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 35 ? PHE A 37 ? ARG A 61 PHE A 63 A 2 ILE A 59 ? TRP A 61 ? ILE A 85 TRP A 87 A 3 GLN A 83 ? ASP A 85 ? GLN A 109 ASP A 111 A 4 THR A 108 ? HIS A 110 ? THR A 134 HIS A 136 A 5 TYR A 132 ? TYR A 134 ? TYR A 158 TYR A 160 A 6 HIS A 156 ? PHE A 158 ? HIS A 182 PHE A 184 A 7 ARG A 180 ? LEU A 182 ? ARG A 206 LEU A 208 A 8 THR A 204 ? TYR A 206 ? THR A 230 TYR A 232 A 9 TYR A 228 ? ARG A 230 ? TYR A 254 ARG A 256 B 1 HIS A 45 ? VAL A 46 ? HIS A 71 VAL A 72 B 2 ARG A 69 ? ILE A 70 ? ARG A 95 ILE A 96 C 1 SER A 166 ? VAL A 167 ? SER A 192 VAL A 193 C 2 HIS A 190 ? VAL A 191 ? HIS A 216 VAL A 217 D 1 TRP A 236 ? VAL A 237 ? TRP A 262 VAL A 263 D 2 CYS A 261 ? LEU A 263 ? CYS A 287 LEU A 289 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 36 ? N ILE A 62 O ILE A 59 ? O ILE A 85 A 2 3 N LEU A 60 ? N LEU A 86 O ASP A 85 ? O ASP A 111 A 3 4 N LEU A 84 ? N LEU A 110 O THR A 108 ? O THR A 134 A 4 5 N LEU A 109 ? N LEU A 135 O TYR A 132 ? O TYR A 158 A 5 6 N LEU A 133 ? N LEU A 159 O HIS A 156 ? O HIS A 182 A 6 7 N LEU A 157 ? N LEU A 183 O LEU A 182 ? O LEU A 208 A 7 8 N LEU A 181 ? N LEU A 207 O TYR A 206 ? O TYR A 232 A 8 9 N LEU A 205 ? N LEU A 231 O TYR A 228 ? O TYR A 254 B 1 2 N VAL A 46 ? N VAL A 72 O ARG A 69 ? O ARG A 95 C 1 2 N VAL A 167 ? N VAL A 193 O HIS A 190 ? O HIS A 216 D 1 2 N TRP A 236 ? N TRP A 262 O SER A 262 ? O SER A 288 # _database_PDB_matrix.entry_id 1P8T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P8T _atom_sites.fract_transf_matrix[1][1] 0.008067 _atom_sites.fract_transf_matrix[1][2] 0.004658 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009315 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008321 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CYS 1 27 27 CYS CYS A . n A 1 2 PRO 2 28 28 PRO PRO A . n A 1 3 GLY 3 29 29 GLY GLY A . n A 1 4 ALA 4 30 30 ALA ALA A . n A 1 5 CYS 5 31 31 CYS CYS A . n A 1 6 VAL 6 32 32 VAL VAL A . n A 1 7 CYS 7 33 33 CYS CYS A . n A 1 8 TYR 8 34 34 TYR TYR A . n A 1 9 ASN 9 35 35 ASN ASN A . n A 1 10 GLU 10 36 36 GLU GLU A . n A 1 11 PRO 11 37 37 PRO PRO A . n A 1 12 LYS 12 38 38 LYS LYS A . n A 1 13 VAL 13 39 39 VAL VAL A . n A 1 14 THR 14 40 40 THR THR A . n A 1 15 THR 15 41 41 THR THR A . n A 1 16 SER 16 42 42 SER SER A . n A 1 17 CYS 17 43 43 CYS CYS A . n A 1 18 PRO 18 44 44 PRO PRO A . n A 1 19 GLN 19 45 45 GLN GLN A . n A 1 20 GLN 20 46 46 GLN GLN A . n A 1 21 GLY 21 47 47 GLY GLY A . n A 1 22 LEU 22 48 48 LEU LEU A . n A 1 23 GLN 23 49 49 GLN GLN A . n A 1 24 ALA 24 50 50 ALA ALA A . n A 1 25 VAL 25 51 51 VAL VAL A . n A 1 26 PRO 26 52 52 PRO PRO A . n A 1 27 VAL 27 53 53 VAL VAL A . n A 1 28 GLY 28 54 54 GLY GLY A . n A 1 29 ILE 29 55 55 ILE ILE A . n A 1 30 PRO 30 56 56 PRO PRO A . n A 1 31 ALA 31 57 57 ALA ALA A . n A 1 32 ALA 32 58 58 ALA ALA A . n A 1 33 SER 33 59 59 SER SER A . n A 1 34 GLN 34 60 60 GLN GLN A . n A 1 35 ARG 35 61 61 ARG ARG A . n A 1 36 ILE 36 62 62 ILE ILE A . n A 1 37 PHE 37 63 63 PHE PHE A . n A 1 38 LEU 38 64 64 LEU LEU A . n A 1 39 HIS 39 65 65 HIS HIS A . n A 1 40 GLY 40 66 66 GLY GLY A . n A 1 41 ASN 41 67 67 ASN ASN A . n A 1 42 ARG 42 68 68 ARG ARG A . n A 1 43 ILE 43 69 69 ILE ILE A . n A 1 44 SER 44 70 70 SER SER A . n A 1 45 HIS 45 71 71 HIS HIS A . n A 1 46 VAL 46 72 72 VAL VAL A . n A 1 47 PRO 47 73 73 PRO PRO A . n A 1 48 ALA 48 74 74 ALA ALA A . n A 1 49 ALA 49 75 75 ALA ALA A . n A 1 50 SER 50 76 76 SER SER A . n A 1 51 PHE 51 77 77 PHE PHE A . n A 1 52 ARG 52 78 78 ARG ARG A . n A 1 53 ALA 53 79 79 ALA ALA A . n A 1 54 CYS 54 80 80 CYS CYS A . n A 1 55 ARG 55 81 81 ARG ARG A . n A 1 56 ASN 56 82 82 ASN ASN A . n A 1 57 LEU 57 83 83 LEU LEU A . n A 1 58 THR 58 84 84 THR THR A . n A 1 59 ILE 59 85 85 ILE ILE A . n A 1 60 LEU 60 86 86 LEU LEU A . n A 1 61 TRP 61 87 87 TRP TRP A . n A 1 62 LEU 62 88 88 LEU LEU A . n A 1 63 HIS 63 89 89 HIS HIS A . n A 1 64 SER 64 90 90 SER SER A . n A 1 65 ASN 65 91 91 ASN ASN A . n A 1 66 VAL 66 92 92 VAL VAL A . n A 1 67 LEU 67 93 93 LEU LEU A . n A 1 68 ALA 68 94 94 ALA ALA A . n A 1 69 ARG 69 95 95 ARG ARG A . n A 1 70 ILE 70 96 96 ILE ILE A . n A 1 71 ASP 71 97 97 ASP ASP A . n A 1 72 ALA 72 98 98 ALA ALA A . n A 1 73 ALA 73 99 99 ALA ALA A . n A 1 74 ALA 74 100 100 ALA ALA A . n A 1 75 PHE 75 101 101 PHE PHE A . n A 1 76 THR 76 102 102 THR THR A . n A 1 77 GLY 77 103 103 GLY GLY A . n A 1 78 LEU 78 104 104 LEU LEU A . n A 1 79 ALA 79 105 105 ALA ALA A . n A 1 80 LEU 80 106 106 LEU LEU A . n A 1 81 LEU 81 107 107 LEU LEU A . n A 1 82 GLU 82 108 108 GLU GLU A . n A 1 83 GLN 83 109 109 GLN GLN A . n A 1 84 LEU 84 110 110 LEU LEU A . n A 1 85 ASP 85 111 111 ASP ASP A . n A 1 86 LEU 86 112 112 LEU LEU A . n A 1 87 SER 87 113 113 SER SER A . n A 1 88 ASP 88 114 114 ASP ASP A . n A 1 89 ASN 89 115 115 ASN ASN A . n A 1 90 ALA 90 116 116 ALA ALA A . n A 1 91 GLN 91 117 117 GLN GLN A . n A 1 92 LEU 92 118 118 LEU LEU A . n A 1 93 ARG 93 119 119 ARG ARG A . n A 1 94 SER 94 120 120 SER SER A . n A 1 95 VAL 95 121 121 VAL VAL A . n A 1 96 ASP 96 122 122 ASP ASP A . n A 1 97 PRO 97 123 123 PRO PRO A . n A 1 98 ALA 98 124 124 ALA ALA A . n A 1 99 THR 99 125 125 THR THR A . n A 1 100 PHE 100 126 126 PHE PHE A . n A 1 101 HIS 101 127 127 HIS HIS A . n A 1 102 GLY 102 128 128 GLY GLY A . n A 1 103 LEU 103 129 129 LEU LEU A . n A 1 104 GLY 104 130 130 GLY GLY A . n A 1 105 ARG 105 131 131 ARG ARG A . n A 1 106 LEU 106 132 132 LEU LEU A . n A 1 107 HIS 107 133 133 HIS HIS A . n A 1 108 THR 108 134 134 THR THR A . n A 1 109 LEU 109 135 135 LEU LEU A . n A 1 110 HIS 110 136 136 HIS HIS A . n A 1 111 LEU 111 137 137 LEU LEU A . n A 1 112 ASP 112 138 138 ASP ASP A . n A 1 113 ARG 113 139 139 ARG ARG A . n A 1 114 CYS 114 140 140 CYS CYS A . n A 1 115 GLY 115 141 141 GLY GLY A . n A 1 116 LEU 116 142 142 LEU LEU A . n A 1 117 GLN 117 143 143 GLN GLN A . n A 1 118 GLU 118 144 144 GLU GLU A . n A 1 119 LEU 119 145 145 LEU LEU A . n A 1 120 GLY 120 146 146 GLY GLY A . n A 1 121 PRO 121 147 147 PRO PRO A . n A 1 122 GLY 122 148 148 GLY GLY A . n A 1 123 LEU 123 149 149 LEU LEU A . n A 1 124 PHE 124 150 150 PHE PHE A . n A 1 125 ARG 125 151 151 ARG ARG A . n A 1 126 GLY 126 152 152 GLY GLY A . n A 1 127 LEU 127 153 153 LEU LEU A . n A 1 128 ALA 128 154 154 ALA ALA A . n A 1 129 ALA 129 155 155 ALA ALA A . n A 1 130 LEU 130 156 156 LEU LEU A . n A 1 131 GLN 131 157 157 GLN GLN A . n A 1 132 TYR 132 158 158 TYR TYR A . n A 1 133 LEU 133 159 159 LEU LEU A . n A 1 134 TYR 134 160 160 TYR TYR A . n A 1 135 LEU 135 161 161 LEU LEU A . n A 1 136 GLN 136 162 162 GLN GLN A . n A 1 137 ASP 137 163 163 ASP ASP A . n A 1 138 ASN 138 164 164 ASN ASN A . n A 1 139 ALA 139 165 165 ALA ALA A . n A 1 140 LEU 140 166 166 LEU LEU A . n A 1 141 GLN 141 167 167 GLN GLN A . n A 1 142 ALA 142 168 168 ALA ALA A . n A 1 143 LEU 143 169 169 LEU LEU A . n A 1 144 PRO 144 170 170 PRO PRO A . n A 1 145 ASP 145 171 171 ASP ASP A . n A 1 146 ASP 146 172 172 ASP ASP A . n A 1 147 THR 147 173 173 THR THR A . n A 1 148 PHE 148 174 174 PHE PHE A . n A 1 149 ARG 149 175 175 ARG ARG A . n A 1 150 ASP 150 176 176 ASP ASP A . n A 1 151 LEU 151 177 177 LEU LEU A . n A 1 152 GLY 152 178 178 GLY GLY A . n A 1 153 ASN 153 179 179 ASN ASN A . n A 1 154 LEU 154 180 180 LEU LEU A . n A 1 155 THR 155 181 181 THR THR A . n A 1 156 HIS 156 182 182 HIS HIS A . n A 1 157 LEU 157 183 183 LEU LEU A . n A 1 158 PHE 158 184 184 PHE PHE A . n A 1 159 LEU 159 185 185 LEU LEU A . n A 1 160 HIS 160 186 186 HIS HIS A . n A 1 161 GLY 161 187 187 GLY GLY A . n A 1 162 ASN 162 188 188 ASN ASN A . n A 1 163 ARG 163 189 189 ARG ARG A . n A 1 164 ILE 164 190 190 ILE ILE A . n A 1 165 SER 165 191 191 SER SER A . n A 1 166 SER 166 192 192 SER SER A . n A 1 167 VAL 167 193 193 VAL VAL A . n A 1 168 PRO 168 194 194 PRO PRO A . n A 1 169 GLU 169 195 195 GLU GLU A . n A 1 170 ARG 170 196 196 ARG ARG A . n A 1 171 ALA 171 197 197 ALA ALA A . n A 1 172 PHE 172 198 198 PHE PHE A . n A 1 173 ARG 173 199 199 ARG ARG A . n A 1 174 GLY 174 200 200 GLY GLY A . n A 1 175 LEU 175 201 201 LEU LEU A . n A 1 176 HIS 176 202 202 HIS HIS A . n A 1 177 SER 177 203 203 SER SER A . n A 1 178 LEU 178 204 204 LEU LEU A . n A 1 179 ASP 179 205 205 ASP ASP A . n A 1 180 ARG 180 206 206 ARG ARG A . n A 1 181 LEU 181 207 207 LEU LEU A . n A 1 182 LEU 182 208 208 LEU LEU A . n A 1 183 LEU 183 209 209 LEU LEU A . n A 1 184 HIS 184 210 210 HIS HIS A . n A 1 185 GLN 185 211 211 GLN GLN A . n A 1 186 ASN 186 212 212 ASN ASN A . n A 1 187 ARG 187 213 213 ARG ARG A . n A 1 188 VAL 188 214 214 VAL VAL A . n A 1 189 ALA 189 215 215 ALA ALA A . n A 1 190 HIS 190 216 216 HIS HIS A . n A 1 191 VAL 191 217 217 VAL VAL A . n A 1 192 HIS 192 218 218 HIS HIS A . n A 1 193 PRO 193 219 219 PRO PRO A . n A 1 194 HIS 194 220 220 HIS HIS A . n A 1 195 ALA 195 221 221 ALA ALA A . n A 1 196 PHE 196 222 222 PHE PHE A . n A 1 197 ARG 197 223 223 ARG ARG A . n A 1 198 ASP 198 224 224 ASP ASP A . n A 1 199 LEU 199 225 225 LEU LEU A . n A 1 200 GLY 200 226 226 GLY GLY A . n A 1 201 ARG 201 227 227 ARG ARG A . n A 1 202 LEU 202 228 228 LEU LEU A . n A 1 203 MET 203 229 229 MET MET A . n A 1 204 THR 204 230 230 THR THR A . n A 1 205 LEU 205 231 231 LEU LEU A . n A 1 206 TYR 206 232 232 TYR TYR A . n A 1 207 LEU 207 233 233 LEU LEU A . n A 1 208 PHE 208 234 234 PHE PHE A . n A 1 209 ALA 209 235 235 ALA ALA A . n A 1 210 ASN 210 236 236 ASN ASN A . n A 1 211 ASN 211 237 237 ASN ASN A . n A 1 212 LEU 212 238 238 LEU LEU A . n A 1 213 SER 213 239 239 SER SER A . n A 1 214 ALA 214 240 240 ALA ALA A . n A 1 215 LEU 215 241 241 LEU LEU A . n A 1 216 PRO 216 242 242 PRO PRO A . n A 1 217 THR 217 243 243 THR THR A . n A 1 218 GLU 218 244 244 GLU GLU A . n A 1 219 ALA 219 245 245 ALA ALA A . n A 1 220 LEU 220 246 246 LEU LEU A . n A 1 221 ALA 221 247 247 ALA ALA A . n A 1 222 PRO 222 248 248 PRO PRO A . n A 1 223 LEU 223 249 249 LEU LEU A . n A 1 224 ARG 224 250 250 ARG ARG A . n A 1 225 ALA 225 251 251 ALA ALA A . n A 1 226 LEU 226 252 252 LEU LEU A . n A 1 227 GLN 227 253 253 GLN GLN A . n A 1 228 TYR 228 254 254 TYR TYR A . n A 1 229 LEU 229 255 255 LEU LEU A . n A 1 230 ARG 230 256 256 ARG ARG A . n A 1 231 LEU 231 257 257 LEU LEU A . n A 1 232 ASN 232 258 258 ASN ASN A . n A 1 233 ASP 233 259 259 ASP ASP A . n A 1 234 ASN 234 260 260 ASN ASN A . n A 1 235 PRO 235 261 261 PRO PRO A . n A 1 236 TRP 236 262 262 TRP TRP A . n A 1 237 VAL 237 263 263 VAL VAL A . n A 1 238 CYS 238 264 264 CYS CYS A . n A 1 239 ASP 239 265 265 ASP ASP A . n A 1 240 CYS 240 266 266 CYS CYS A . n A 1 241 ARG 241 267 267 ARG ARG A . n A 1 242 ALA 242 268 268 ALA ALA A . n A 1 243 ARG 243 269 269 ARG ARG A . n A 1 244 PRO 244 270 270 PRO PRO A . n A 1 245 LEU 245 271 271 LEU LEU A . n A 1 246 TRP 246 272 272 TRP TRP A . n A 1 247 ALA 247 273 273 ALA ALA A . n A 1 248 TRP 248 274 274 TRP TRP A . n A 1 249 LEU 249 275 275 LEU LEU A . n A 1 250 GLN 250 276 276 GLN GLN A . n A 1 251 LYS 251 277 277 LYS LYS A . n A 1 252 PHE 252 278 278 PHE PHE A . n A 1 253 ARG 253 279 279 ARG ARG A . n A 1 254 GLY 254 280 280 GLY GLY A . n A 1 255 SER 255 281 281 SER SER A . n A 1 256 SER 256 282 282 SER SER A . n A 1 257 SER 257 283 283 SER SER A . n A 1 258 GLU 258 284 284 GLU GLU A . n A 1 259 VAL 259 285 285 VAL VAL A . n A 1 260 PRO 260 286 286 PRO PRO A . n A 1 261 CYS 261 287 287 CYS CYS A . n A 1 262 SER 262 288 288 SER SER A . n A 1 263 LEU 263 289 289 LEU LEU A . n A 1 264 PRO 264 290 290 PRO PRO A . n A 1 265 GLN 265 291 291 GLN GLN A . n A 1 266 ARG 266 292 292 ARG ARG A . n A 1 267 LEU 267 293 293 LEU LEU A . n A 1 268 ALA 268 294 294 ALA ALA A . n A 1 269 GLY 269 295 295 GLY GLY A . n A 1 270 ARG 270 296 296 ARG ARG A . n A 1 271 ASP 271 297 297 ASP ASP A . n A 1 272 LEU 272 298 298 LEU LEU A . n A 1 273 LYS 273 299 299 LYS LYS A . n A 1 274 ARG 274 300 300 ARG ARG A . n A 1 275 LEU 275 301 301 LEU LEU A . n A 1 276 ALA 276 302 302 ALA ALA A . n A 1 277 ALA 277 303 303 ALA ALA A . n A 1 278 ASN 278 304 304 ASN ASN A . n A 1 279 ASP 279 305 305 ASP ASP A . n A 1 280 LEU 280 306 306 LEU LEU A . n A 1 281 GLN 281 307 307 GLN GLN A . n A 1 282 GLY 282 308 308 GLY GLY A . n A 1 283 CYS 283 309 309 CYS CYS A . n A 1 284 ALA 284 310 310 ALA ALA A . n A 1 285 VAL 285 311 311 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 401 401 NAG NAG A . C 3 NDG 1 402 402 NDG NAG A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-05-20 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' Advisory 5 4 'Structure model' 'Atomic model' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Derived calculations' 8 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_entity_nonpoly 6 4 'Structure model' pdbx_unobs_or_zero_occ_atoms 7 4 'Structure model' struct_site 8 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_chem_comp.name' 4 4 'Structure model' '_chem_comp.type' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SHARP phasing . ? 3 CNS refinement . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 A ASP 171 ? ? CG A ARG 196 ? ? 1.29 2 1 CB A ALA 75 ? ? NE A ARG 78 ? ? 1.44 3 1 CE1 A HIS 220 ? ? OE1 A GLU 244 ? ? 1.83 4 1 OE2 A GLU 195 ? ? NE2 A HIS 218 ? ? 1.94 5 1 CG A GLU 195 ? ? CD2 A HIS 218 ? ? 1.95 6 1 CG A GLU 195 ? ? NE2 A HIS 218 ? ? 1.96 7 1 CB A SER 282 ? ? NZ A LYS 299 ? ? 2.04 8 1 OD1 A ASP 171 ? ? CD A ARG 196 ? ? 2.11 9 1 O A ARG 196 ? ? CG A ARG 199 ? ? 2.11 10 1 CD2 A LEU 275 ? ? NZ A LYS 299 ? ? 2.13 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NH2 A ARG 139 ? ? 1_555 CB A ALA 310 ? ? 3_654 1.79 2 1 OE1 A GLU 36 ? ? 1_555 O A GLN 276 ? ? 3_654 2.04 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 N _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 PHE _pdbx_validate_rmsd_bond.auth_seq_id_1 278 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CA _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 PHE _pdbx_validate_rmsd_bond.auth_seq_id_2 278 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.621 _pdbx_validate_rmsd_bond.bond_target_value 1.459 _pdbx_validate_rmsd_bond.bond_deviation 0.162 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.020 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 PHE _pdbx_validate_rmsd_angle.auth_seq_id_1 278 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 PHE _pdbx_validate_rmsd_angle.auth_seq_id_2 278 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 PHE _pdbx_validate_rmsd_angle.auth_seq_id_3 278 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 128.57 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation 17.57 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 36 ? ? -3.91 -99.79 2 1 SER A 42 ? ? 43.95 99.78 3 1 ALA A 58 ? ? -74.59 33.22 4 1 ASN A 67 ? ? -95.74 -152.43 5 1 ILE A 69 ? ? -58.44 107.34 6 1 ALA A 79 ? ? -64.71 1.45 7 1 CYS A 80 ? ? -97.82 45.64 8 1 SER A 90 ? ? 65.03 69.79 9 1 ASN A 91 ? ? -146.03 13.00 10 1 ALA A 94 ? ? -133.34 -35.93 11 1 ALA A 99 ? ? -74.72 -75.51 12 1 ALA A 100 ? ? 40.83 -104.98 13 1 ALA A 116 ? ? -63.08 9.27 14 1 ARG A 119 ? ? 56.91 -23.09 15 1 PRO A 123 ? ? -37.19 -34.36 16 1 LEU A 129 ? ? 19.03 53.65 17 1 PRO A 147 ? ? -28.99 -94.22 18 1 ALA A 154 ? ? 7.71 -69.74 19 1 ASN A 164 ? ? -125.80 -160.59 20 1 LEU A 177 ? ? -69.09 81.53 21 1 ASN A 188 ? ? -93.25 -146.25 22 1 ARG A 199 ? ? -93.89 -70.54 23 1 LEU A 201 ? ? -62.17 38.42 24 1 SER A 203 ? ? 55.00 4.74 25 1 ARG A 206 ? ? -162.26 115.43 26 1 HIS A 210 ? ? -56.35 170.70 27 1 HIS A 220 ? ? 72.21 -8.49 28 1 ARG A 223 ? ? -68.11 53.41 29 1 ASP A 224 ? ? 150.03 19.90 30 1 ARG A 227 ? ? 66.07 -18.03 31 1 ALA A 235 ? ? 55.16 78.52 32 1 ASN A 236 ? ? -155.90 6.09 33 1 PRO A 242 ? ? -59.89 -174.64 34 1 THR A 243 ? ? -78.20 -77.02 35 1 GLU A 244 ? ? -57.25 0.92 36 1 LEU A 249 ? ? -71.87 48.83 37 1 TRP A 262 ? ? -59.19 109.95 38 1 CYS A 264 ? ? -115.38 69.61 39 1 PHE A 278 ? ? -27.05 116.92 40 1 SER A 283 ? ? -112.35 -147.77 41 1 LEU A 289 ? ? -179.52 143.91 42 1 GLN A 291 ? ? -63.94 -170.39 43 1 ARG A 292 ? ? 66.30 -23.46 44 1 GLN A 307 ? ? -112.42 -154.45 45 1 CYS A 309 ? ? -75.04 -168.85 46 1 ALA A 310 ? ? -26.08 84.03 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 2-acetamido-2-deoxy-alpha-D-glucopyranose NDG #