HEADER CELL CYCLE 09-MAY-03 1P94 TITLE NMR STRUCTURE OF PARG SYMMETRIC DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMID PARTITION PROTEIN PARG; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA ENTERICA; SOURCE 3 ORGANISM_TAXID: 28901; SOURCE 4 GENE: PARG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22-B(+) KEYWDS RIBBON-HELIX-HELIX, DIMER, DNA BINDING, CELL CYCLE EXPDTA SOLUTION NMR NUMMDL 11 MDLTYP MINIMIZED AVERAGE AUTHOR A.P.GOLOVANOV,D.BARILLA,M.GOLOVANOVA,F.HAYES,L.Y.LIAN REVDAT 3 23-FEB-22 1P94 1 REMARK REVDAT 2 24-FEB-09 1P94 1 VERSN REVDAT 1 13-JAN-04 1P94 0 JRNL AUTH A.P.GOLOVANOV,D.BARILLA,M.GOLOVANOVA,F.HAYES,L.Y.LIAN JRNL TITL PARG, A PROTEIN REQUIRED FOR ACTIVE PARTITION OF BACTERIAL JRNL TITL 2 PLASMIDS, HAS A DIMERIC RIBBON-HELIX-HELIX STRUCTURE. JRNL REF MOL.MICROBIOL. V. 50 1141 2003 JRNL REFN ISSN 0950-382X JRNL PMID 14622405 JRNL DOI 10.1046/J.1365-2958.2003.03750.X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH F.HAYES REMARK 1 TITL THE PARTITION SYSTEM OF MULTIDRUG RESISTANCE PLASMID TP228 REMARK 1 TITL 2 INCLUDES A NOVEL PROTEIN THAT EPITOMIZES AN EVOLUTIONARILY REMARK 1 TITL 3 DISTINCT SUBGROUP OF THE PARA SUPERFAMILY REMARK 1 REF MOL.MICROBIOL. V. 37 528 2000 REMARK 1 REFN ISSN 0950-382X REMARK 1 DOI 10.1046/J.1365-2958.2000.02030.X REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, CNS 1.0 REMARK 3 AUTHORS : DELAGLIO ET AL. (NMRPIPE), BRUNGER ET AL. (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 THE PARG STRUCTURE IS BASED ON 2230 AMBIGUOUS NOE RESTRAINTS, 82 REMARK 3 HYDROGEN BOND RESTRAINTS, AND 144 CSI-BASED DIHEDRAL ANGLE REMARK 3 RESTRAINTS. REMARK 3 N-TERMINAL REGION OF PARG (1-32) IS UNSTRUCTURED. THE C-TERMINAL REMARK 3 REGION (33-76) IS STRUCTURED. REMARK 4 REMARK 4 1P94 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000019162. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 5.5 REMARK 210 IONIC STRENGTH : 150 MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM PARG U-15N,13C; 100 MM REMARK 210 NACL, 50 MM PHOSPHATE BUFFER, 1 REMARK 210 MM DTT; 90% H2O, 10% D2O; 1 MM REMARK 210 PARG U-15N; 100 MM NACL, 50 MM REMARK 210 PHOSPHATE BUFFER, 1 MM DTT; 100% REMARK 210 D2O; 1 MM PARG U-15N; 100 MM REMARK 210 NACL, 50 MM PHOSPHATE BUFFER, 1 REMARK 210 MM DTT; 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY; 2D NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.01, ARIA 1.1, CNS 1.0 REMARK 210 METHOD USED : ARIA PROTOCOL (NILGES, M. ET REMARK 210 AL., (1997) J. MOL. BIOL. 269, REMARK 210 408-422) WAS USED TO DEAL WITH REMARK 210 AMBIGUOUS DISTANCE RESTRAINTS REMARK 210 AND FOR SOME NOE ASSIGNMENTS. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 11 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY,TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: BEST REPRESENTATIVE CONFORMER (MODEL 1) IN THIS ENSEMBLE REMARK 210 WAS OBTAINED BY ENERGY MINIMIZATION OF THE AVERAGE REMARK 210 STRUCTURE, CALCULATED FOR MODELS 2-11 REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HD2 LYS A 11 H MET A 13 1.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 HIS A 7 45.26 -103.25 REMARK 500 1 VAL A 10 -74.36 -40.12 REMARK 500 1 LYS A 12 8.21 145.99 REMARK 500 1 MET A 13 15.63 54.66 REMARK 500 1 THR A 14 27.04 45.59 REMARK 500 1 GLU A 22 73.62 54.23 REMARK 500 1 THR A 26 78.92 -63.81 REMARK 500 1 ALA A 27 155.74 -47.39 REMARK 500 1 VAL A 29 -55.55 73.85 REMARK 500 1 VAL A 37 -37.47 -146.47 REMARK 500 1 ASN A 38 103.97 57.48 REMARK 500 1 LEU B 3 35.69 -85.21 REMARK 500 1 GLU B 4 -25.14 61.07 REMARK 500 1 LYS B 5 -13.86 65.63 REMARK 500 1 VAL B 10 57.54 76.98 REMARK 500 1 LYS B 11 88.33 52.31 REMARK 500 1 LYS B 12 35.80 38.73 REMARK 500 1 MET B 13 89.65 48.03 REMARK 500 1 GLU B 22 37.85 31.99 REMARK 500 1 ARG B 23 35.91 -77.06 REMARK 500 1 VAL B 25 55.64 26.89 REMARK 500 1 THR B 26 -32.83 -39.30 REMARK 500 1 ALA B 27 69.93 12.94 REMARK 500 1 PRO B 28 80.90 -29.01 REMARK 500 2 SER A 2 -75.41 70.06 REMARK 500 2 SER A 9 -147.16 56.17 REMARK 500 2 SER A 31 72.73 57.40 REMARK 500 2 LYS A 33 59.54 -115.57 REMARK 500 2 ALA B 6 -169.58 69.43 REMARK 500 2 HIS B 7 143.33 -170.38 REMARK 500 2 SER B 9 115.16 62.90 REMARK 500 2 PRO B 28 -168.17 -75.08 REMARK 500 2 SER B 31 -138.97 52.78 REMARK 500 3 HIS A 7 52.35 -141.26 REMARK 500 3 MET A 13 58.26 -100.86 REMARK 500 3 LEU A 21 36.10 -149.41 REMARK 500 3 MET B 13 38.03 -95.60 REMARK 500 3 ARG B 19 80.18 55.42 REMARK 500 4 SER A 2 48.09 -75.25 REMARK 500 4 LEU A 3 -84.19 -154.83 REMARK 500 4 LYS A 5 -156.35 -121.71 REMARK 500 4 LYS A 11 -163.83 -124.79 REMARK 500 4 LEU B 3 -70.98 -70.93 REMARK 500 4 HIS B 7 40.31 70.65 REMARK 500 5 SER A 2 36.14 -145.90 REMARK 500 5 LYS A 5 96.83 67.10 REMARK 500 5 LYS A 11 -74.80 73.28 REMARK 500 5 GLU A 17 72.33 55.32 REMARK 500 5 LEU A 21 28.85 -152.27 REMARK 500 5 LYS B 5 93.24 66.82 REMARK 500 REMARK 500 THIS ENTRY HAS 96 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5563 RELATED DB: BMRB REMARK 900 NMR SIGNAL ASSIGNMENTS, EXPERIMENTAL CONDITIONS DBREF 1P94 A 1 76 UNP Q9KJ82 Q9KJ82_SALNE 1 76 DBREF 1P94 B 1 76 UNP Q9KJ82 Q9KJ82_SALNE 1 76 SEQRES 1 A 76 MET SER LEU GLU LYS ALA HIS THR SER VAL LYS LYS MET SEQRES 2 A 76 THR PHE GLY GLU ASN ARG ASP LEU GLU ARG VAL VAL THR SEQRES 3 A 76 ALA PRO VAL SER SER GLY LYS ILE LYS ARG VAL ASN VAL SEQRES 4 A 76 ASN PHE ASP GLU GLU LYS HIS THR ARG PHE LYS ALA ALA SEQRES 5 A 76 CYS ALA ARG LYS GLY THR SER ILE THR ASP VAL VAL ASN SEQRES 6 A 76 GLN LEU VAL ASP ASN TRP LEU LYS GLU ASN GLU SEQRES 1 B 76 MET SER LEU GLU LYS ALA HIS THR SER VAL LYS LYS MET SEQRES 2 B 76 THR PHE GLY GLU ASN ARG ASP LEU GLU ARG VAL VAL THR SEQRES 3 B 76 ALA PRO VAL SER SER GLY LYS ILE LYS ARG VAL ASN VAL SEQRES 4 B 76 ASN PHE ASP GLU GLU LYS HIS THR ARG PHE LYS ALA ALA SEQRES 5 B 76 CYS ALA ARG LYS GLY THR SER ILE THR ASP VAL VAL ASN SEQRES 6 B 76 GLN LEU VAL ASP ASN TRP LEU LYS GLU ASN GLU HELIX 1 1 GLU A 43 GLY A 57 1 15 HELIX 2 2 SER A 59 ASN A 75 1 17 HELIX 3 3 GLU B 43 GLY B 57 1 15 HELIX 4 4 SER B 59 ASN B 75 1 17 SHEET 1 A 2 ILE A 34 ASP A 42 0 SHEET 2 A 2 ILE B 34 ASP B 42 -1 O PHE B 41 N LYS A 35 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1