data_1P9H # _entry.id 1P9H # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1P9H pdb_00001p9h 10.2210/pdb1p9h/pdb RCSB RCSB019175 ? ? WWPDB D_1000019175 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-23 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' diffrn_source 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P9H _pdbx_database_status.recvd_initial_deposition_date 2003-05-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Nummelin, H.' 1 'Merckel, M.C.' 2 'Skurnik, M.' 3 'Goldman, A.' 4 # _citation.id primary _citation.title 'The Yersinia adhesin YadA collagen-binding domain structure is a novel left-handed parallel beta-roll.' _citation.journal_abbrev 'Embo J.' _citation.journal_volume 23 _citation.page_first 701 _citation.page_last 711 _citation.year 2004 _citation.journal_id_ASTM EMJODG _citation.country UK _citation.journal_id_ISSN 0261-4189 _citation.journal_id_CSD 0897 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14765110 _citation.pdbx_database_id_DOI 10.1038/sj.emboj.7600100 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Nummelin, H.' 1 ? primary 'Merckel, M.C.' 2 ? primary 'Leo, J.C.' 3 ? primary 'Lankinen, H.' 4 ? primary 'Skurnik, M.' 5 ? primary 'Goldman, A.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Invasin 22806.059 1 ? ? 'COLLAGEN-BINDING DOMAIN' ? 2 water nat water 18.015 105 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Outer membrane adhesin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHDDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIA TGVNSVAIGPLSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGD RSKTDRENSVSIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHDDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIA TGVNSVAIGPLSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGD RSKTDRENSVSIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 ASP n 1 12 ASP n 1 13 TYR n 1 14 ASP n 1 15 GLY n 1 16 ILE n 1 17 PRO n 1 18 ASN n 1 19 LEU n 1 20 THR n 1 21 ALA n 1 22 VAL n 1 23 GLN n 1 24 ILE n 1 25 SER n 1 26 PRO n 1 27 ASN n 1 28 ALA n 1 29 ASP n 1 30 PRO n 1 31 ALA n 1 32 LEU n 1 33 GLY n 1 34 LEU n 1 35 GLU n 1 36 TYR n 1 37 PRO n 1 38 VAL n 1 39 ARG n 1 40 PRO n 1 41 PRO n 1 42 VAL n 1 43 PRO n 1 44 GLY n 1 45 ALA n 1 46 GLY n 1 47 GLY n 1 48 LEU n 1 49 ASN n 1 50 ALA n 1 51 SER n 1 52 ALA n 1 53 LYS n 1 54 GLY n 1 55 ILE n 1 56 HIS n 1 57 SER n 1 58 ILE n 1 59 ALA n 1 60 ILE n 1 61 GLY n 1 62 ALA n 1 63 THR n 1 64 ALA n 1 65 GLU n 1 66 ALA n 1 67 ALA n 1 68 LYS n 1 69 GLY n 1 70 ALA n 1 71 ALA n 1 72 VAL n 1 73 ALA n 1 74 VAL n 1 75 GLY n 1 76 ALA n 1 77 GLY n 1 78 SER n 1 79 ILE n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 VAL n 1 84 ASN n 1 85 SER n 1 86 VAL n 1 87 ALA n 1 88 ILE n 1 89 GLY n 1 90 PRO n 1 91 LEU n 1 92 SER n 1 93 LYS n 1 94 ALA n 1 95 LEU n 1 96 GLY n 1 97 ASP n 1 98 SER n 1 99 ALA n 1 100 VAL n 1 101 THR n 1 102 TYR n 1 103 GLY n 1 104 ALA n 1 105 ALA n 1 106 SER n 1 107 THR n 1 108 ALA n 1 109 GLN n 1 110 LYS n 1 111 ASP n 1 112 GLY n 1 113 VAL n 1 114 ALA n 1 115 ILE n 1 116 GLY n 1 117 ALA n 1 118 ARG n 1 119 ALA n 1 120 SER n 1 121 THR n 1 122 SER n 1 123 ASP n 1 124 THR n 1 125 GLY n 1 126 VAL n 1 127 ALA n 1 128 VAL n 1 129 GLY n 1 130 PHE n 1 131 ASN n 1 132 SER n 1 133 LYS n 1 134 ALA n 1 135 ASP n 1 136 ALA n 1 137 LYS n 1 138 ASN n 1 139 SER n 1 140 VAL n 1 141 ALA n 1 142 ILE n 1 143 GLY n 1 144 HIS n 1 145 SER n 1 146 SER n 1 147 HIS n 1 148 VAL n 1 149 ALA n 1 150 ALA n 1 151 ASN n 1 152 HIS n 1 153 GLY n 1 154 TYR n 1 155 SER n 1 156 ILE n 1 157 ALA n 1 158 ILE n 1 159 GLY n 1 160 ASP n 1 161 ARG n 1 162 SER n 1 163 LYS n 1 164 THR n 1 165 ASP n 1 166 ARG n 1 167 GLU n 1 168 ASN n 1 169 SER n 1 170 VAL n 1 171 SER n 1 172 ILE n 1 173 GLY n 1 174 HIS n 1 175 GLU n 1 176 SER n 1 177 LEU n 1 178 ASN n 1 179 ARG n 1 180 GLN n 1 181 LEU n 1 182 THR n 1 183 HIS n 1 184 LEU n 1 185 ALA n 1 186 ALA n 1 187 GLY n 1 188 THR n 1 189 LYS n 1 190 ASP n 1 191 THR n 1 192 ASP n 1 193 ALA n 1 194 VAL n 1 195 ASN n 1 196 VAL n 1 197 ALA n 1 198 GLN n 1 199 LEU n 1 200 LYS n 1 201 LYS n 1 202 GLU n 1 203 ILE n 1 204 GLU n 1 205 LYS n 1 206 THR n 1 207 GLN n 1 208 GLU n 1 209 ASN n 1 210 THR n 1 211 ASN n 1 212 LYS n 1 213 ARG n 1 214 SER n 1 215 ALA n 1 216 GLU n 1 217 LEU n 1 218 LEU n 1 219 ALA n 1 220 ASN n 1 221 ALA n 1 222 ASN n 1 223 ALA n 1 224 TYR n 1 225 ALA n 1 226 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Yersinia _entity_src_gen.pdbx_gene_src_gene 'YADA OR YOPA OR INVA OR YOP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Yersinia enterocolitica' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'M15(pREP4)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector pQE-30 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHN-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 16 ? ? ? A . n A 1 2 ARG 2 17 ? ? ? A . n A 1 3 GLY 3 18 ? ? ? A . n A 1 4 SER 4 19 ? ? ? A . n A 1 5 HIS 5 20 ? ? ? A . n A 1 6 HIS 6 21 ? ? ? A . n A 1 7 HIS 7 22 ? ? ? A . n A 1 8 HIS 8 23 ? ? ? A . n A 1 9 HIS 9 24 ? ? ? A . n A 1 10 HIS 10 25 ? ? ? A . n A 1 11 ASP 11 26 ? ? ? A . n A 1 12 ASP 12 27 ? ? ? A . n A 1 13 TYR 13 28 ? ? ? A . n A 1 14 ASP 14 29 ? ? ? A . n A 1 15 GLY 15 30 ? ? ? A . n A 1 16 ILE 16 31 ? ? ? A . n A 1 17 PRO 17 32 32 PRO PRO A . n A 1 18 ASN 18 33 33 ASN ASN A . n A 1 19 LEU 19 34 34 LEU LEU A . n A 1 20 THR 20 35 35 THR THR A . n A 1 21 ALA 21 36 36 ALA ALA A . n A 1 22 VAL 22 37 37 VAL VAL A . n A 1 23 GLN 23 38 38 GLN GLN A . n A 1 24 ILE 24 39 39 ILE ILE A . n A 1 25 SER 25 40 40 SER SER A . n A 1 26 PRO 26 41 41 PRO PRO A . n A 1 27 ASN 27 42 42 ASN ASN A . n A 1 28 ALA 28 43 43 ALA ALA A . n A 1 29 ASP 29 44 44 ASP ASP A . n A 1 30 PRO 30 45 45 PRO PRO A . n A 1 31 ALA 31 46 46 ALA ALA A . n A 1 32 LEU 32 47 47 LEU LEU A . n A 1 33 GLY 33 48 48 GLY GLY A . n A 1 34 LEU 34 49 49 LEU LEU A . n A 1 35 GLU 35 50 50 GLU GLU A . n A 1 36 TYR 36 51 51 TYR TYR A . n A 1 37 PRO 37 52 ? ? ? A . n A 1 38 VAL 38 53 ? ? ? A . n A 1 39 ARG 39 54 ? ? ? A . n A 1 40 PRO 40 55 ? ? ? A . n A 1 41 PRO 41 56 ? ? ? A . n A 1 42 VAL 42 57 ? ? ? A . n A 1 43 PRO 43 58 ? ? ? A . n A 1 44 GLY 44 59 ? ? ? A . n A 1 45 ALA 45 60 ? ? ? A . n A 1 46 GLY 46 61 ? ? ? A . n A 1 47 GLY 47 62 62 GLY GLY A . n A 1 48 LEU 48 63 63 LEU LEU A . n A 1 49 ASN 49 64 64 ASN ASN A . n A 1 50 ALA 50 65 65 ALA ALA A . n A 1 51 SER 51 66 66 SER SER A . n A 1 52 ALA 52 67 67 ALA ALA A . n A 1 53 LYS 53 68 68 LYS LYS A . n A 1 54 GLY 54 69 69 GLY GLY A . n A 1 55 ILE 55 70 70 ILE ILE A . n A 1 56 HIS 56 71 71 HIS HIS A . n A 1 57 SER 57 72 72 SER SER A . n A 1 58 ILE 58 73 73 ILE ILE A . n A 1 59 ALA 59 74 74 ALA ALA A . n A 1 60 ILE 60 75 75 ILE ILE A . n A 1 61 GLY 61 76 76 GLY GLY A . n A 1 62 ALA 62 77 77 ALA ALA A . n A 1 63 THR 63 78 78 THR THR A . n A 1 64 ALA 64 79 79 ALA ALA A . n A 1 65 GLU 65 80 80 GLU GLU A . n A 1 66 ALA 66 81 81 ALA ALA A . n A 1 67 ALA 67 82 82 ALA ALA A . n A 1 68 LYS 68 83 83 LYS LYS A . n A 1 69 GLY 69 84 84 GLY GLY A . n A 1 70 ALA 70 85 85 ALA ALA A . n A 1 71 ALA 71 86 86 ALA ALA A . n A 1 72 VAL 72 87 87 VAL VAL A . n A 1 73 ALA 73 88 88 ALA ALA A . n A 1 74 VAL 74 89 89 VAL VAL A . n A 1 75 GLY 75 90 90 GLY GLY A . n A 1 76 ALA 76 91 91 ALA ALA A . n A 1 77 GLY 77 92 92 GLY GLY A . n A 1 78 SER 78 93 93 SER SER A . n A 1 79 ILE 79 94 94 ILE ILE A . n A 1 80 ALA 80 95 95 ALA ALA A . n A 1 81 THR 81 96 96 THR THR A . n A 1 82 GLY 82 97 97 GLY GLY A . n A 1 83 VAL 83 98 98 VAL VAL A . n A 1 84 ASN 84 99 99 ASN ASN A . n A 1 85 SER 85 100 100 SER SER A . n A 1 86 VAL 86 101 101 VAL VAL A . n A 1 87 ALA 87 102 102 ALA ALA A . n A 1 88 ILE 88 103 103 ILE ILE A . n A 1 89 GLY 89 104 104 GLY GLY A . n A 1 90 PRO 90 105 105 PRO PRO A . n A 1 91 LEU 91 106 106 LEU LEU A . n A 1 92 SER 92 107 107 SER SER A . n A 1 93 LYS 93 108 108 LYS LYS A . n A 1 94 ALA 94 109 109 ALA ALA A . n A 1 95 LEU 95 110 110 LEU LEU A . n A 1 96 GLY 96 111 111 GLY GLY A . n A 1 97 ASP 97 112 112 ASP ASP A . n A 1 98 SER 98 113 113 SER SER A . n A 1 99 ALA 99 114 114 ALA ALA A . n A 1 100 VAL 100 115 115 VAL VAL A . n A 1 101 THR 101 116 116 THR THR A . n A 1 102 TYR 102 117 117 TYR TYR A . n A 1 103 GLY 103 118 118 GLY GLY A . n A 1 104 ALA 104 119 119 ALA ALA A . n A 1 105 ALA 105 120 120 ALA ALA A . n A 1 106 SER 106 121 121 SER SER A . n A 1 107 THR 107 122 122 THR THR A . n A 1 108 ALA 108 123 123 ALA ALA A . n A 1 109 GLN 109 124 124 GLN GLN A . n A 1 110 LYS 110 125 125 LYS LYS A . n A 1 111 ASP 111 126 126 ASP ASP A . n A 1 112 GLY 112 127 127 GLY GLY A . n A 1 113 VAL 113 128 128 VAL VAL A . n A 1 114 ALA 114 129 129 ALA ALA A . n A 1 115 ILE 115 130 130 ILE ILE A . n A 1 116 GLY 116 131 131 GLY GLY A . n A 1 117 ALA 117 132 132 ALA ALA A . n A 1 118 ARG 118 133 133 ARG ARG A . n A 1 119 ALA 119 134 134 ALA ALA A . n A 1 120 SER 120 135 135 SER SER A . n A 1 121 THR 121 136 136 THR THR A . n A 1 122 SER 122 137 137 SER SER A . n A 1 123 ASP 123 138 138 ASP ASP A . n A 1 124 THR 124 139 139 THR THR A . n A 1 125 GLY 125 140 140 GLY GLY A . n A 1 126 VAL 126 141 141 VAL VAL A . n A 1 127 ALA 127 142 142 ALA ALA A . n A 1 128 VAL 128 143 143 VAL VAL A . n A 1 129 GLY 129 144 144 GLY GLY A . n A 1 130 PHE 130 145 145 PHE PHE A . n A 1 131 ASN 131 146 146 ASN ASN A . n A 1 132 SER 132 147 147 SER SER A . n A 1 133 LYS 133 148 148 LYS LYS A . n A 1 134 ALA 134 149 149 ALA ALA A . n A 1 135 ASP 135 150 150 ASP ASP A . n A 1 136 ALA 136 151 151 ALA ALA A . n A 1 137 LYS 137 152 152 LYS LYS A . n A 1 138 ASN 138 153 153 ASN ASN A . n A 1 139 SER 139 154 154 SER SER A . n A 1 140 VAL 140 155 155 VAL VAL A . n A 1 141 ALA 141 156 156 ALA ALA A . n A 1 142 ILE 142 157 157 ILE ILE A . n A 1 143 GLY 143 158 158 GLY GLY A . n A 1 144 HIS 144 159 159 HIS HIS A . n A 1 145 SER 145 160 160 SER SER A . n A 1 146 SER 146 161 161 SER SER A . n A 1 147 HIS 147 162 162 HIS HIS A . n A 1 148 VAL 148 163 163 VAL VAL A . n A 1 149 ALA 149 164 164 ALA ALA A . n A 1 150 ALA 150 165 165 ALA ALA A . n A 1 151 ASN 151 166 166 ASN ASN A . n A 1 152 HIS 152 167 167 HIS HIS A . n A 1 153 GLY 153 168 168 GLY GLY A . n A 1 154 TYR 154 169 169 TYR TYR A . n A 1 155 SER 155 170 170 SER SER A . n A 1 156 ILE 156 171 171 ILE ILE A . n A 1 157 ALA 157 172 172 ALA ALA A . n A 1 158 ILE 158 173 173 ILE ILE A . n A 1 159 GLY 159 174 174 GLY GLY A . n A 1 160 ASP 160 175 175 ASP ASP A . n A 1 161 ARG 161 176 176 ARG ARG A . n A 1 162 SER 162 177 177 SER SER A . n A 1 163 LYS 163 178 178 LYS ALA A . n A 1 164 THR 164 179 179 THR THR A . n A 1 165 ASP 165 180 180 ASP ASP A . n A 1 166 ARG 166 181 181 ARG ARG A . n A 1 167 GLU 167 182 182 GLU GLU A . n A 1 168 ASN 168 183 183 ASN ASN A . n A 1 169 SER 169 184 184 SER SER A . n A 1 170 VAL 170 185 185 VAL VAL A . n A 1 171 SER 171 186 186 SER SER A . n A 1 172 ILE 172 187 187 ILE ILE A . n A 1 173 GLY 173 188 188 GLY GLY A . n A 1 174 HIS 174 189 189 HIS HIS A . n A 1 175 GLU 175 190 190 GLU GLU A . n A 1 176 SER 176 191 191 SER SER A . n A 1 177 LEU 177 192 192 LEU LEU A . n A 1 178 ASN 178 193 193 ASN ASN A . n A 1 179 ARG 179 194 194 ARG ARG A . n A 1 180 GLN 180 195 195 GLN GLN A . n A 1 181 LEU 181 196 196 LEU LEU A . n A 1 182 THR 182 197 197 THR THR A . n A 1 183 HIS 183 198 198 HIS HIS A . n A 1 184 LEU 184 199 199 LEU LEU A . n A 1 185 ALA 185 200 200 ALA ALA A . n A 1 186 ALA 186 201 201 ALA ALA A . n A 1 187 GLY 187 202 202 GLY GLY A . n A 1 188 THR 188 203 203 THR THR A . n A 1 189 LYS 189 204 204 LYS LYS A . n A 1 190 ASP 190 205 205 ASP ASP A . n A 1 191 THR 191 206 206 THR THR A . n A 1 192 ASP 192 207 207 ASP ASP A . n A 1 193 ALA 193 208 208 ALA ALA A . n A 1 194 VAL 194 209 209 VAL VAL A . n A 1 195 ASN 195 210 210 ASN ASN A . n A 1 196 VAL 196 211 211 VAL VAL A . n A 1 197 ALA 197 212 212 ALA ALA A . n A 1 198 GLN 198 213 213 GLN GLN A . n A 1 199 LEU 199 214 214 LEU LEU A . n A 1 200 LYS 200 215 215 LYS LYS A . n A 1 201 LYS 201 216 216 LYS ALA A . n A 1 202 GLU 202 217 217 GLU GLU A . n A 1 203 ILE 203 218 218 ILE ILE A . n A 1 204 GLU 204 219 219 GLU ALA A . n A 1 205 LYS 205 220 220 LYS LYS A . n A 1 206 THR 206 221 ? ? ? A . n A 1 207 GLN 207 222 ? ? ? A . n A 1 208 GLU 208 223 ? ? ? A . n A 1 209 ASN 209 224 ? ? ? A . n A 1 210 THR 210 225 ? ? ? A . n A 1 211 ASN 211 226 ? ? ? A . n A 1 212 LYS 212 227 ? ? ? A . n A 1 213 ARG 213 228 ? ? ? A . n A 1 214 SER 214 229 ? ? ? A . n A 1 215 ALA 215 230 ? ? ? A . n A 1 216 GLU 216 231 ? ? ? A . n A 1 217 LEU 217 232 ? ? ? A . n A 1 218 LEU 218 233 ? ? ? A . n A 1 219 ALA 219 234 ? ? ? A . n A 1 220 ASN 220 235 ? ? ? A . n A 1 221 ALA 221 236 ? ? ? A . n A 1 222 ASN 222 237 ? ? ? A . n A 1 223 ALA 223 238 ? ? ? A . n A 1 224 TYR 224 239 ? ? ? A . n A 1 225 ALA 225 240 ? ? ? A . n A 1 226 ASP 226 241 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 242 221 HOH WAT A . B 2 HOH 2 243 222 HOH WAT A . B 2 HOH 3 244 223 HOH WAT A . B 2 HOH 4 245 224 HOH WAT A . B 2 HOH 5 246 225 HOH WAT A . B 2 HOH 6 247 226 HOH WAT A . B 2 HOH 7 248 227 HOH WAT A . B 2 HOH 8 249 228 HOH WAT A . B 2 HOH 9 250 229 HOH WAT A . B 2 HOH 10 251 230 HOH WAT A . B 2 HOH 11 252 231 HOH WAT A . B 2 HOH 12 253 232 HOH WAT A . B 2 HOH 13 254 233 HOH WAT A . B 2 HOH 14 255 234 HOH WAT A . B 2 HOH 15 256 235 HOH WAT A . B 2 HOH 16 257 236 HOH WAT A . B 2 HOH 17 258 237 HOH WAT A . B 2 HOH 18 259 238 HOH WAT A . B 2 HOH 19 260 239 HOH WAT A . B 2 HOH 20 261 240 HOH WAT A . B 2 HOH 21 262 241 HOH WAT A . B 2 HOH 22 263 242 HOH WAT A . B 2 HOH 23 264 243 HOH WAT A . B 2 HOH 24 265 244 HOH WAT A . B 2 HOH 25 266 245 HOH WAT A . B 2 HOH 26 267 246 HOH WAT A . B 2 HOH 27 268 247 HOH WAT A . B 2 HOH 28 269 248 HOH WAT A . B 2 HOH 29 270 249 HOH WAT A . B 2 HOH 30 271 250 HOH WAT A . B 2 HOH 31 272 251 HOH WAT A . B 2 HOH 32 273 252 HOH WAT A . B 2 HOH 33 274 253 HOH WAT A . B 2 HOH 34 275 254 HOH WAT A . B 2 HOH 35 276 255 HOH WAT A . B 2 HOH 36 277 256 HOH WAT A . B 2 HOH 37 278 257 HOH WAT A . B 2 HOH 38 279 258 HOH WAT A . B 2 HOH 39 280 259 HOH WAT A . B 2 HOH 40 281 260 HOH WAT A . B 2 HOH 41 282 261 HOH WAT A . B 2 HOH 42 283 262 HOH WAT A . B 2 HOH 43 284 263 HOH WAT A . B 2 HOH 44 285 264 HOH WAT A . B 2 HOH 45 286 265 HOH WAT A . B 2 HOH 46 287 266 HOH WAT A . B 2 HOH 47 288 267 HOH WAT A . B 2 HOH 48 289 268 HOH WAT A . B 2 HOH 49 290 269 HOH WAT A . B 2 HOH 50 291 270 HOH WAT A . B 2 HOH 51 292 271 HOH WAT A . B 2 HOH 52 293 272 HOH WAT A . B 2 HOH 53 294 273 HOH WAT A . B 2 HOH 54 295 274 HOH WAT A . B 2 HOH 55 296 275 HOH WAT A . B 2 HOH 56 297 276 HOH WAT A . B 2 HOH 57 298 277 HOH WAT A . B 2 HOH 58 299 278 HOH WAT A . B 2 HOH 59 300 279 HOH WAT A . B 2 HOH 60 301 280 HOH WAT A . B 2 HOH 61 302 281 HOH WAT A . B 2 HOH 62 303 282 HOH WAT A . B 2 HOH 63 304 283 HOH WAT A . B 2 HOH 64 305 284 HOH WAT A . B 2 HOH 65 306 285 HOH WAT A . B 2 HOH 66 307 286 HOH WAT A . B 2 HOH 67 308 287 HOH WAT A . B 2 HOH 68 309 288 HOH WAT A . B 2 HOH 69 310 289 HOH WAT A . B 2 HOH 70 311 290 HOH WAT A . B 2 HOH 71 312 291 HOH WAT A . B 2 HOH 72 313 292 HOH WAT A . B 2 HOH 73 314 293 HOH WAT A . B 2 HOH 74 315 294 HOH WAT A . B 2 HOH 75 316 295 HOH WAT A . B 2 HOH 76 317 296 HOH WAT A . B 2 HOH 77 318 297 HOH WAT A . B 2 HOH 78 319 298 HOH WAT A . B 2 HOH 79 320 299 HOH WAT A . B 2 HOH 80 321 300 HOH WAT A . B 2 HOH 81 322 301 HOH WAT A . B 2 HOH 82 323 302 HOH WAT A . B 2 HOH 83 324 303 HOH WAT A . B 2 HOH 84 325 304 HOH WAT A . B 2 HOH 85 326 305 HOH WAT A . B 2 HOH 86 327 306 HOH WAT A . B 2 HOH 87 328 307 HOH WAT A . B 2 HOH 88 329 308 HOH WAT A . B 2 HOH 89 330 309 HOH WAT A . B 2 HOH 90 331 310 HOH WAT A . B 2 HOH 91 332 311 HOH WAT A . B 2 HOH 92 333 312 HOH WAT A . B 2 HOH 93 334 313 HOH WAT A . B 2 HOH 94 335 314 HOH WAT A . B 2 HOH 95 336 315 HOH WAT A . B 2 HOH 96 337 316 HOH WAT A . B 2 HOH 97 338 317 HOH WAT A . B 2 HOH 98 339 318 HOH WAT A . B 2 HOH 99 340 319 HOH WAT A . B 2 HOH 100 341 320 HOH WAT A . B 2 HOH 101 342 321 HOH WAT A . B 2 HOH 102 343 322 HOH WAT A . B 2 HOH 103 344 323 HOH WAT A . B 2 HOH 104 345 324 HOH WAT A . B 2 HOH 105 346 325 HOH WAT A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 178 ? CG ? A LYS 163 CG 2 1 Y 1 A LYS 178 ? CD ? A LYS 163 CD 3 1 Y 1 A LYS 178 ? CE ? A LYS 163 CE 4 1 Y 1 A LYS 178 ? NZ ? A LYS 163 NZ 5 1 Y 1 A LYS 216 ? CG ? A LYS 201 CG 6 1 Y 1 A LYS 216 ? CD ? A LYS 201 CD 7 1 Y 1 A LYS 216 ? CE ? A LYS 201 CE 8 1 Y 1 A LYS 216 ? NZ ? A LYS 201 NZ 9 1 Y 1 A GLU 219 ? CG ? A GLU 204 CG 10 1 Y 1 A GLU 219 ? CD ? A GLU 204 CD 11 1 Y 1 A GLU 219 ? OE1 ? A GLU 204 OE1 12 1 Y 1 A GLU 219 ? OE2 ? A GLU 204 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _cell.entry_id 1P9H _cell.length_a 67.050 _cell.length_b 67.050 _cell.length_c 221.953 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P9H _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 1P9H _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 48.92 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG 8000, sodium acetate, sodium-cacotylate, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2000-06-19 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91020 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X11' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X11 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.91020 # _reflns.entry_id 1P9H _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.55 _reflns.number_obs 28240 _reflns.number_all 28431 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.058 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.0 _reflns.B_iso_Wilson_estimate 18.6 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.61 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.429 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.5 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2763 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1P9H _refine.ls_number_reflns_obs 27177 _refine.ls_number_reflns_all 28429 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 263358.66 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF 263358.66 _refine.ls_d_res_low 19.87 _refine.ls_d_res_high 1.55 _refine.ls_percent_reflns_obs 95.9 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1956 _refine.ls_R_factor_R_free 0.2038 _refine.ls_R_factor_R_free_error 0.004 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2694 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 17.0 _refine.aniso_B[1][1] 0.31 _refine.aniso_B[2][2] 0.31 _refine.aniso_B[3][3] -0.63 _refine.aniso_B[1][2] 0.62 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.704203 _refine.solvent_model_param_bsol 124.626 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1P9H _refine_analyze.Luzzati_coordinate_error_obs 0.16 _refine_analyze.Luzzati_sigma_a_obs 0.09 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.18 _refine_analyze.Luzzati_sigma_a_free 0.12 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1228 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 1333 _refine_hist.d_res_high 1.55 _refine_hist.d_res_low 19.87 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.004 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 26.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.66 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.55 _refine_ls_shell.d_res_low 1.65 _refine_ls_shell.number_reflns_R_work 3665 _refine_ls_shell.R_factor_R_work 0.233 _refine_ls_shell.percent_reflns_obs 87.9 _refine_ls_shell.R_factor_R_free 0.275 _refine_ls_shell.R_factor_R_free_error 0.013 _refine_ls_shell.percent_reflns_R_free 10.2 _refine_ls_shell.number_reflns_R_free 417 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1P9H _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1P9H _struct.title 'CRYSTAL STRUCTURE OF THE COLLAGEN-BINDING DOMAIN OF YERSINIA ADHESIN YadA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P9H _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'collagen-binding, left-handed beta-roll, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YADA1_YEREN _struct_ref.pdbx_db_accession P31489 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DDYDGIPNLTAVQISPNADPALGLEYPVRPPVPGAGGLNASAKGIHSIAIGATAEAAKGAAVAVGAGSIATGVNSVAIGP LSKALGDSAVTYGAASTAQKDGVAIGARASTSDTGVAVGFNSKADAKNSVAIGHSSHVAANHGYSIAIGDRSKTDRENSV SIGHESLNRQLTHLAAGTKDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYAD ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1P9H _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 11 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 226 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P31489 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 241 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 26 _struct_ref_seq.pdbx_auth_seq_align_end 241 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1P9H MET A 1 ? UNP P31489 ? ? 'expression tag' 16 1 1 1P9H ARG A 2 ? UNP P31489 ? ? 'expression tag' 17 2 1 1P9H GLY A 3 ? UNP P31489 ? ? 'expression tag' 18 3 1 1P9H SER A 4 ? UNP P31489 ? ? 'expression tag' 19 4 1 1P9H HIS A 5 ? UNP P31489 ? ? 'expression tag' 20 5 1 1P9H HIS A 6 ? UNP P31489 ? ? 'expression tag' 21 6 1 1P9H HIS A 7 ? UNP P31489 ? ? 'expression tag' 22 7 1 1P9H HIS A 8 ? UNP P31489 ? ? 'expression tag' 23 8 1 1P9H HIS A 9 ? UNP P31489 ? ? 'expression tag' 24 9 1 1P9H HIS A 10 ? UNP P31489 ? ? 'expression tag' 25 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 15080 ? 1 MORE -95 ? 1 'SSA (A^2)' 16840 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5000000000 -0.8660254038 0.0000000000 -33.5250000000 0.8660254038 -0.5000000000 0.0000000000 58.0670033237 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5000000000 0.8660254038 0.0000000000 -67.0500000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 195 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 205 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 210 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 220 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 8 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel A 8 9 ? parallel A 9 10 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel B 6 7 ? parallel B 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 22 ? ILE A 24 ? VAL A 37 ILE A 39 A 2 ILE A 58 ? ILE A 60 ? ILE A 73 ILE A 75 A 3 VAL A 72 ? VAL A 74 ? VAL A 87 VAL A 89 A 4 VAL A 86 ? ILE A 88 ? VAL A 101 ILE A 103 A 5 VAL A 100 ? TYR A 102 ? VAL A 115 TYR A 117 A 6 VAL A 113 ? ILE A 115 ? VAL A 128 ILE A 130 A 7 VAL A 126 ? VAL A 128 ? VAL A 141 VAL A 143 A 8 VAL A 140 ? ILE A 142 ? VAL A 155 ILE A 157 A 9 ILE A 156 ? ILE A 158 ? ILE A 171 ILE A 173 A 10 VAL A 170 ? SER A 171 ? VAL A 185 SER A 186 B 1 SER A 51 ? ALA A 52 ? SER A 66 ALA A 67 B 2 GLU A 65 ? ALA A 66 ? GLU A 80 ALA A 81 B 3 ILE A 79 ? ALA A 80 ? ILE A 94 ALA A 95 B 4 LYS A 93 ? ALA A 94 ? LYS A 108 ALA A 109 B 5 THR A 107 ? ALA A 108 ? THR A 122 ALA A 123 B 6 SER A 120 ? THR A 121 ? SER A 135 THR A 136 B 7 LYS A 133 ? ALA A 134 ? LYS A 148 ALA A 149 B 8 HIS A 147 ? VAL A 148 ? HIS A 162 VAL A 163 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 24 ? N ILE A 39 O ALA A 59 ? O ALA A 74 A 2 3 N ILE A 58 ? N ILE A 73 O ALA A 73 ? O ALA A 88 A 3 4 N VAL A 72 ? N VAL A 87 O ALA A 87 ? O ALA A 102 A 4 5 N VAL A 86 ? N VAL A 101 O THR A 101 ? O THR A 116 A 5 6 N TYR A 102 ? N TYR A 117 O ALA A 114 ? O ALA A 129 A 6 7 N ILE A 115 ? N ILE A 130 O ALA A 127 ? O ALA A 142 A 7 8 N VAL A 126 ? N VAL A 141 O ALA A 141 ? O ALA A 156 A 8 9 N ILE A 142 ? N ILE A 157 O ALA A 157 ? O ALA A 172 A 9 10 N ILE A 156 ? N ILE A 171 O SER A 171 ? O SER A 186 B 1 2 N SER A 51 ? N SER A 66 O ALA A 66 ? O ALA A 81 B 2 3 N GLU A 65 ? N GLU A 80 O ALA A 80 ? O ALA A 95 B 3 4 N ILE A 79 ? N ILE A 94 O ALA A 94 ? O ALA A 109 B 4 5 N LYS A 93 ? N LYS A 108 O ALA A 108 ? O ALA A 123 B 5 6 N THR A 107 ? N THR A 122 O THR A 121 ? O THR A 136 B 6 7 N SER A 120 ? N SER A 135 O ALA A 134 ? O ALA A 149 B 7 8 N LYS A 133 ? N LYS A 148 O VAL A 148 ? O VAL A 163 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 78 ? A 54.97 15.33 2 1 ALA A 85 ? ? 56.80 9.64 3 1 ASN A 99 ? ? 59.59 17.13 4 1 SER A 113 ? ? 62.38 -0.10 5 1 ASP A 126 ? ? 57.26 17.97 6 1 THR A 139 ? ? 49.53 24.94 7 1 ALA A 149 ? ? -103.46 76.71 8 1 HIS A 167 ? ? -101.82 71.70 9 1 TYR A 169 ? ? 49.70 28.97 10 1 ARG A 176 ? ? 58.41 11.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 16 ? A MET 1 2 1 Y 1 A ARG 17 ? A ARG 2 3 1 Y 1 A GLY 18 ? A GLY 3 4 1 Y 1 A SER 19 ? A SER 4 5 1 Y 1 A HIS 20 ? A HIS 5 6 1 Y 1 A HIS 21 ? A HIS 6 7 1 Y 1 A HIS 22 ? A HIS 7 8 1 Y 1 A HIS 23 ? A HIS 8 9 1 Y 1 A HIS 24 ? A HIS 9 10 1 Y 1 A HIS 25 ? A HIS 10 11 1 Y 1 A ASP 26 ? A ASP 11 12 1 Y 1 A ASP 27 ? A ASP 12 13 1 Y 1 A TYR 28 ? A TYR 13 14 1 Y 1 A ASP 29 ? A ASP 14 15 1 Y 1 A GLY 30 ? A GLY 15 16 1 Y 1 A ILE 31 ? A ILE 16 17 1 Y 1 A PRO 52 ? A PRO 37 18 1 Y 1 A VAL 53 ? A VAL 38 19 1 Y 1 A ARG 54 ? A ARG 39 20 1 Y 1 A PRO 55 ? A PRO 40 21 1 Y 1 A PRO 56 ? A PRO 41 22 1 Y 1 A VAL 57 ? A VAL 42 23 1 Y 1 A PRO 58 ? A PRO 43 24 1 Y 1 A GLY 59 ? A GLY 44 25 1 Y 1 A ALA 60 ? A ALA 45 26 1 Y 1 A GLY 61 ? A GLY 46 27 1 Y 1 A THR 221 ? A THR 206 28 1 Y 1 A GLN 222 ? A GLN 207 29 1 Y 1 A GLU 223 ? A GLU 208 30 1 Y 1 A ASN 224 ? A ASN 209 31 1 Y 1 A THR 225 ? A THR 210 32 1 Y 1 A ASN 226 ? A ASN 211 33 1 Y 1 A LYS 227 ? A LYS 212 34 1 Y 1 A ARG 228 ? A ARG 213 35 1 Y 1 A SER 229 ? A SER 214 36 1 Y 1 A ALA 230 ? A ALA 215 37 1 Y 1 A GLU 231 ? A GLU 216 38 1 Y 1 A LEU 232 ? A LEU 217 39 1 Y 1 A LEU 233 ? A LEU 218 40 1 Y 1 A ALA 234 ? A ALA 219 41 1 Y 1 A ASN 235 ? A ASN 220 42 1 Y 1 A ALA 236 ? A ALA 221 43 1 Y 1 A ASN 237 ? A ASN 222 44 1 Y 1 A ALA 238 ? A ALA 223 45 1 Y 1 A TYR 239 ? A TYR 224 46 1 Y 1 A ALA 240 ? A ALA 225 47 1 Y 1 A ASP 241 ? A ASP 226 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TYR N N N N 307 TYR CA C N S 308 TYR C C N N 309 TYR O O N N 310 TYR CB C N N 311 TYR CG C Y N 312 TYR CD1 C Y N 313 TYR CD2 C Y N 314 TYR CE1 C Y N 315 TYR CE2 C Y N 316 TYR CZ C Y N 317 TYR OH O N N 318 TYR OXT O N N 319 TYR H H N N 320 TYR H2 H N N 321 TYR HA H N N 322 TYR HB2 H N N 323 TYR HB3 H N N 324 TYR HD1 H N N 325 TYR HD2 H N N 326 TYR HE1 H N N 327 TYR HE2 H N N 328 TYR HH H N N 329 TYR HXT H N N 330 VAL N N N N 331 VAL CA C N S 332 VAL C C N N 333 VAL O O N N 334 VAL CB C N N 335 VAL CG1 C N N 336 VAL CG2 C N N 337 VAL OXT O N N 338 VAL H H N N 339 VAL H2 H N N 340 VAL HA H N N 341 VAL HB H N N 342 VAL HG11 H N N 343 VAL HG12 H N N 344 VAL HG13 H N N 345 VAL HG21 H N N 346 VAL HG22 H N N 347 VAL HG23 H N N 348 VAL HXT H N N 349 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 THR N CA sing N N 277 THR N H sing N N 278 THR N H2 sing N N 279 THR CA C sing N N 280 THR CA CB sing N N 281 THR CA HA sing N N 282 THR C O doub N N 283 THR C OXT sing N N 284 THR CB OG1 sing N N 285 THR CB CG2 sing N N 286 THR CB HB sing N N 287 THR OG1 HG1 sing N N 288 THR CG2 HG21 sing N N 289 THR CG2 HG22 sing N N 290 THR CG2 HG23 sing N N 291 THR OXT HXT sing N N 292 TYR N CA sing N N 293 TYR N H sing N N 294 TYR N H2 sing N N 295 TYR CA C sing N N 296 TYR CA CB sing N N 297 TYR CA HA sing N N 298 TYR C O doub N N 299 TYR C OXT sing N N 300 TYR CB CG sing N N 301 TYR CB HB2 sing N N 302 TYR CB HB3 sing N N 303 TYR CG CD1 doub Y N 304 TYR CG CD2 sing Y N 305 TYR CD1 CE1 sing Y N 306 TYR CD1 HD1 sing N N 307 TYR CD2 CE2 doub Y N 308 TYR CD2 HD2 sing N N 309 TYR CE1 CZ doub Y N 310 TYR CE1 HE1 sing N N 311 TYR CE2 CZ sing Y N 312 TYR CE2 HE2 sing N N 313 TYR CZ OH sing N N 314 TYR OH HH sing N N 315 TYR OXT HXT sing N N 316 VAL N CA sing N N 317 VAL N H sing N N 318 VAL N H2 sing N N 319 VAL CA C sing N N 320 VAL CA CB sing N N 321 VAL CA HA sing N N 322 VAL C O doub N N 323 VAL C OXT sing N N 324 VAL CB CG1 sing N N 325 VAL CB CG2 sing N N 326 VAL CB HB sing N N 327 VAL CG1 HG11 sing N N 328 VAL CG1 HG12 sing N N 329 VAL CG1 HG13 sing N N 330 VAL CG2 HG21 sing N N 331 VAL CG2 HG22 sing N N 332 VAL CG2 HG23 sing N N 333 VAL OXT HXT sing N N 334 # _atom_sites.entry_id 1P9H _atom_sites.fract_transf_matrix[1][1] 0.014914 _atom_sites.fract_transf_matrix[1][2] 0.008611 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017221 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004505 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_