HEADER TRANSCRIPTION REGULATION 15-JUL-94 1PAA TITLE STRUCTURE OF A HISTIDINE-X4-HISTIDINE ZINC FINGER DOMAIN: INSIGHTS TITLE 2 INTO ADR1-UAS1 PROTEIN-DNA RECOGNITION COMPND MOL_ID: 1; COMPND 2 MOLECULE: YEAST TRANSCRIPTION FACTOR ADR1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932 KEYWDS TRANSCRIPTION REGULATION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR B.E.BERNSTEIN,R.C.HOFFMAN,S.J.HORVATH,J.R.HERRIOTT,R.E.KLEVIT REVDAT 5 01-MAY-24 1PAA 1 REMARK SEQADV LINK REVDAT 4 29-NOV-17 1PAA 1 REMARK HELIX REVDAT 3 24-FEB-09 1PAA 1 VERSN REVDAT 2 01-APR-03 1PAA 1 JRNL REVDAT 1 15-OCT-94 1PAA 0 JRNL AUTH B.E.BERNSTEIN,R.C.HOFFMAN,S.HORVATH,J.R.HERRIOTT,R.E.KLEVIT JRNL TITL STRUCTURE OF A HISTIDINE-X4-HISTIDINE ZINC FINGER DOMAIN: JRNL TITL 2 INSIGHTS INTO ADR1-UAS1 PROTEIN-DNA RECOGNITION. JRNL REF BIOCHEMISTRY V. 33 4460 1994 JRNL REFN ISSN 0006-2960 JRNL PMID 8161501 JRNL DOI 10.1021/BI00181A005 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH R.C.HOFFMAN,R.X.XU,R.E.KLEVIT,J.R.HERRIOTT REMARK 1 TITL A SIMPLE METHOD FOR THE REFINEMENT OF MODELS DERIVED FROM REMARK 1 TITL 2 NMR DATA DEMONSTRATED ON A ZINC-FINGER DOMAIN FROM YEAST REMARK 1 TITL 3 ADR1 REMARK 1 REF J.MAGN.RESON.,SER.B V. 102 61 1993 REMARK 1 REFN ISSN 1064-1866 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DIANA, REPENT REMARK 3 AUTHORS : GUNTERT,BRAUN,WUTHRICH (DIANA), REMARK 3 HOFFMAN,XU,KLEVIT,HERRIOTT (REPENT) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PAA COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000175559. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : NULL REMARK 210 PH : NULL REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : NULL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : NULL REMARK 210 SPECTROMETER FIELD STRENGTH : NULL REMARK 210 SPECTROMETER MODEL : NULL REMARK 210 SPECTROMETER MANUFACTURER : NULL REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : NULL REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TYR A 132 90.88 -38.26 REMARK 500 1 LEU A 136 -61.54 -91.90 REMARK 500 1 ASN A 138 -11.55 87.42 REMARK 500 1 ILE A 148 -70.14 -66.12 REMARK 500 1 ILE A 154 -72.05 -71.98 REMARK 500 1 SER A 156 82.39 -11.69 REMARK 500 2 LEU A 136 -63.87 -94.02 REMARK 500 2 ASN A 138 -18.45 91.54 REMARK 500 2 ILE A 148 -71.14 -68.05 REMARK 500 2 ARG A 149 -36.32 -38.07 REMARK 500 2 LYS A 153 -67.16 -104.67 REMARK 500 2 ILE A 154 -71.31 -68.77 REMARK 500 2 SER A 156 80.07 -9.32 REMARK 500 3 ALA A 131 165.89 -44.86 REMARK 500 3 LEU A 136 -63.90 -92.31 REMARK 500 3 ASN A 138 -17.51 91.23 REMARK 500 3 LYS A 153 -66.30 -99.93 REMARK 500 3 ILE A 154 -71.22 -70.34 REMARK 500 3 SER A 156 71.36 -9.32 REMARK 500 4 TYR A 132 88.66 -36.03 REMARK 500 4 LEU A 136 -63.47 -92.01 REMARK 500 4 ASN A 138 -13.16 87.06 REMARK 500 4 ILE A 148 -73.10 -72.66 REMARK 500 4 ARG A 149 -36.51 -38.08 REMARK 500 4 LYS A 153 -71.99 -107.37 REMARK 500 4 SER A 156 -174.77 -47.46 REMARK 500 5 TYR A 132 87.77 -44.93 REMARK 500 5 LEU A 136 -63.64 -93.86 REMARK 500 5 ASN A 138 -14.12 90.61 REMARK 500 5 LYS A 153 -68.61 -103.46 REMARK 500 5 SER A 156 88.58 -20.61 REMARK 500 6 TYR A 132 87.41 -37.49 REMARK 500 6 LEU A 136 -63.48 -94.44 REMARK 500 6 ASN A 138 -17.15 89.20 REMARK 500 6 LYS A 153 -66.69 -101.03 REMARK 500 6 ILE A 154 -73.52 -69.47 REMARK 500 6 SER A 156 80.41 -8.66 REMARK 500 7 TYR A 132 87.29 -50.18 REMARK 500 7 LEU A 136 -63.21 -93.72 REMARK 500 7 ASN A 138 -10.25 87.12 REMARK 500 7 ILE A 148 -71.68 -67.50 REMARK 500 7 LYS A 153 -66.87 -107.94 REMARK 500 7 ILE A 154 -73.47 -65.11 REMARK 500 7 SER A 156 82.30 -8.04 REMARK 500 7 ASN A 158 105.70 -39.45 REMARK 500 8 ALA A 131 154.46 -47.45 REMARK 500 8 TYR A 132 86.27 -66.77 REMARK 500 8 LEU A 136 -62.01 -92.31 REMARK 500 8 ASN A 138 -9.30 85.17 REMARK 500 8 ILE A 148 -70.30 -66.24 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 139 0.15 SIDE CHAIN REMARK 500 1 ARG A 143 0.26 SIDE CHAIN REMARK 500 1 ARG A 144 0.30 SIDE CHAIN REMARK 500 1 ARG A 149 0.28 SIDE CHAIN REMARK 500 2 ARG A 139 0.16 SIDE CHAIN REMARK 500 2 ARG A 143 0.25 SIDE CHAIN REMARK 500 2 ARG A 144 0.28 SIDE CHAIN REMARK 500 2 ARG A 149 0.30 SIDE CHAIN REMARK 500 3 ARG A 139 0.16 SIDE CHAIN REMARK 500 3 ARG A 143 0.08 SIDE CHAIN REMARK 500 3 ARG A 144 0.28 SIDE CHAIN REMARK 500 3 ARG A 149 0.30 SIDE CHAIN REMARK 500 4 ARG A 139 0.18 SIDE CHAIN REMARK 500 4 ARG A 144 0.19 SIDE CHAIN REMARK 500 4 ARG A 149 0.30 SIDE CHAIN REMARK 500 5 ARG A 139 0.30 SIDE CHAIN REMARK 500 5 ARG A 143 0.30 SIDE CHAIN REMARK 500 5 ARG A 144 0.15 SIDE CHAIN REMARK 500 5 ARG A 149 0.10 SIDE CHAIN REMARK 500 6 ARG A 139 0.27 SIDE CHAIN REMARK 500 6 ARG A 143 0.29 SIDE CHAIN REMARK 500 6 ARG A 144 0.20 SIDE CHAIN REMARK 500 6 ARG A 149 0.10 SIDE CHAIN REMARK 500 7 ARG A 139 0.12 SIDE CHAIN REMARK 500 7 ARG A 143 0.29 SIDE CHAIN REMARK 500 7 ARG A 144 0.24 SIDE CHAIN REMARK 500 7 ARG A 149 0.20 SIDE CHAIN REMARK 500 8 ARG A 143 0.29 SIDE CHAIN REMARK 500 8 ARG A 144 0.29 SIDE CHAIN REMARK 500 8 ARG A 149 0.29 SIDE CHAIN REMARK 500 9 ARG A 139 0.11 SIDE CHAIN REMARK 500 9 ARG A 143 0.30 SIDE CHAIN REMARK 500 9 ARG A 144 0.30 SIDE CHAIN REMARK 500 9 ARG A 149 0.30 SIDE CHAIN REMARK 500 10 ARG A 143 0.28 SIDE CHAIN REMARK 500 10 ARG A 144 0.30 SIDE CHAIN REMARK 500 10 ARG A 149 0.21 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 160 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 134 SG REMARK 620 2 CYS A 137 SG 116.3 REMARK 620 3 HIS A 150 NE2 98.8 81.2 REMARK 620 4 HIS A 155 NE2 111.4 131.9 96.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 160 DBREF 1PAA A 130 159 UNP P07248 ADR1_YEAST 130 159 SEQADV 1PAA ALA A 131 UNP P07248 PRO 131 CONFLICT SEQADV 1PAA ALA A 133 UNP P07248 PRO 133 CONFLICT SEQADV 1PAA ALA A 140 UNP P07248 CYS 140 CONFLICT SEQRES 1 A 30 LYS ALA TYR ALA CYS GLY LEU CYS ASN ARG ALA PHE THR SEQRES 2 A 30 ARG ARG ASP LEU LEU ILE ARG HIS ALA GLN LYS ILE HIS SEQRES 3 A 30 SER GLY ASN LEU HET ZN A 160 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 AAA ARG A 144 ALA A 151 1ALPHA & 3/10 HELICAL H-BONDS 8 SHEET 1 BBB 2 ALA A 131 CYS A 134 0 SHEET 2 BBB 2 ARG A 139 PHE A 141 -1 LINK SG CYS A 134 ZN ZN A 160 1555 1555 2.27 LINK SG CYS A 137 ZN ZN A 160 1555 1555 2.27 LINK NE2 HIS A 150 ZN ZN A 160 1555 1555 1.92 LINK NE2 HIS A 155 ZN ZN A 160 1555 1555 2.04 SITE 1 AC1 5 CYS A 134 LEU A 136 CYS A 137 HIS A 150 SITE 2 AC1 5 HIS A 155 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1