HEADER TRANSPORT PROTEIN 18-MAY-03 1PCX TITLE CRYSTAL STRUCTURE OF THE COPII COAT SUBUNIT, SEC24, COMPLEXED WITH A TITLE 2 PEPTIDE FROM THE SNARE PROTEIN BET1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TRANSPORT PROTEIN SEC24; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ABNORMAL NUCLEAR MORPHOLOGY 1; COMPND 5 OTHER_DETAILS: SEC24 FRAGMENT LACKING N-TERMINAL RESIDUES 1-116; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: COPII-BINDING PEPTIDE OF THE PROTEIN TRANSPORT PROTEIN COMPND 8 BET1; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE SOURCE 8 OF THE PEPTIDE IS NATURALLY FOUND IN SACCHAROMYCES CEREVISIAE KEYWDS TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.MOSSESSOVA,L.C.BICKFORD,J.GOLDBERG REVDAT 4 14-FEB-24 1PCX 1 REMARK LINK REVDAT 3 24-FEB-09 1PCX 1 VERSN REVDAT 2 18-JAN-05 1PCX 1 JRNL REVDAT 1 19-AUG-03 1PCX 0 JRNL AUTH E.MOSSESSOVA,L.C.BICKFORD,J.GOLDBERG JRNL TITL SNARE SELECTIVITY OF THE COPII COAT. JRNL REF CELL(CAMBRIDGE,MASS.) V. 114 483 2003 JRNL REFN ISSN 0092-8674 JRNL PMID 12941276 JRNL DOI 10.1016/S0092-8674(03)00608-1 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 84.6 REMARK 3 NUMBER OF REFLECTIONS : 30945 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1560 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.30 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3844 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 175 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.029 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5951 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 15.87000 REMARK 3 B22 (A**2) : 15.87000 REMARK 3 B33 (A**2) : -31.74000 REMARK 3 B12 (A**2) : 12.56000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.51 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.53 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.90 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.930 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.420 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.450 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.870 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.820 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.29 REMARK 3 BSOL : 36.13 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : &_1_PARAMETER_INFILE_4 REMARK 3 PARAMETER FILE 5 : &_1_PARAMETER_INFILE_5 REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : &_1_TOPOLOGY_INFILE_4 REMARK 3 TOPOLOGY FILE 5 : &_1_TOPOLOGY_INFILE_5 REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PCX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000019239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34136 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : 0.09990 REMARK 200 FOR THE DATA SET : 47.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.30000 REMARK 200 R SYM FOR SHELL (I) : 0.09990 REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM ACETATE 1,6-HEXANEDIOL, COBALT REMARK 280 CHLORIDE, PH 5.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 132.38267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.19133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 66.19133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 132.38267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 117 REMARK 465 ALA A 118 REMARK 465 PRO A 119 REMARK 465 ALA A 120 REMARK 465 TYR A 121 REMARK 465 GLY A 122 REMARK 465 GLN A 123 REMARK 465 PRO A 124 REMARK 465 SER A 125 REMARK 465 ALA A 126 REMARK 465 ALA A 127 REMARK 465 MET A 128 REMARK 465 GLY A 129 REMARK 465 GLN A 130 REMARK 465 ASN A 131 REMARK 465 MET A 132 REMARK 465 SER A 269 REMARK 465 ASP A 270 REMARK 465 PRO A 271 REMARK 465 ASN A 272 REMARK 465 ASP A 273 REMARK 465 ASN A 366 REMARK 465 GLU A 367 REMARK 465 GLU A 368 REMARK 465 SER A 369 REMARK 465 ALA A 370 REMARK 465 ASP A 371 REMARK 465 GLN A 372 REMARK 465 PRO A 384 REMARK 465 PHE A 385 REMARK 465 LEU A 386 REMARK 465 PRO A 387 REMARK 465 ARG A 388 REMARK 465 ARG A 460 REMARK 465 ASN A 461 REMARK 465 GLU A 462 REMARK 465 SER A 463 REMARK 465 GLY A 464 REMARK 465 VAL A 465 REMARK 465 VAL A 466 REMARK 465 ASN A 467 REMARK 465 THR A 468 REMARK 465 SER A 469 REMARK 465 LYS A 470 REMARK 465 GLU A 471 REMARK 465 THR A 472 REMARK 465 ALA A 473 REMARK 465 GLN A 474 REMARK 465 LEU A 475 REMARK 465 LEU A 476 REMARK 465 SER A 477 REMARK 465 CYS A 478 REMARK 465 GLN A 479 REMARK 465 VAL A 692 REMARK 465 SER A 693 REMARK 465 ASN A 694 REMARK 465 THR A 695 REMARK 465 GLN A 771 REMARK 465 THR A 772 REMARK 465 GLU A 773 REMARK 465 ASP A 774 REMARK 465 GLY A 775 REMARK 465 GLU A 776 REMARK 465 ALA A 777 REMARK 465 THR A 778 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 882 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 134 38.20 -70.40 REMARK 500 ILE A 151 -5.45 -49.40 REMARK 500 VAL A 162 85.73 -65.72 REMARK 500 ALA A 188 80.80 -154.11 REMARK 500 ARG A 233 -71.92 -88.10 REMARK 500 PRO A 240 -7.37 -56.83 REMARK 500 GLU A 246 74.47 60.12 REMARK 500 ARG A 257 18.70 48.39 REMARK 500 ASP A 267 24.41 -141.33 REMARK 500 PRO A 301 133.75 -37.13 REMARK 500 ASN A 332 21.73 -144.13 REMARK 500 ASN A 338 46.87 -150.58 REMARK 500 ASP A 351 -110.65 -135.60 REMARK 500 GLU A 364 38.72 -96.18 REMARK 500 SER A 391 8.33 80.82 REMARK 500 ILE A 410 -62.57 -28.96 REMARK 500 SER A 481 -1.35 -142.70 REMARK 500 ALA A 520 7.03 81.13 REMARK 500 TYR A 526 79.30 -118.57 REMARK 500 SER A 530 114.99 -164.91 REMARK 500 PRO A 534 -19.49 -41.88 REMARK 500 PHE A 575 172.71 167.91 REMARK 500 ARG A 578 -75.12 -103.31 REMARK 500 PRO A 589 -174.57 -67.48 REMARK 500 ASP A 601 -82.87 -88.56 REMARK 500 ASN A 620 30.05 -81.48 REMARK 500 LEU A 664 -2.82 -52.60 REMARK 500 SER A 666 -75.04 -118.13 REMARK 500 ARG A 708 -7.62 -55.84 REMARK 500 ARG A 724 155.48 -44.73 REMARK 500 PRO A 769 178.83 -56.28 REMARK 500 ASP A 815 39.08 -96.89 REMARK 500 SER A 846 85.72 -156.51 REMARK 500 SER A 880 66.76 -117.71 REMARK 500 PRO A 882 -171.34 -63.11 REMARK 500 ASN A 884 57.35 -154.70 REMARK 500 VAL A 903 2.48 -51.27 REMARK 500 LEU A 908 -124.69 65.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 950 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 231 SG REMARK 620 2 CYS A 234 SG 98.9 REMARK 620 3 CYS A 253 SG 113.9 100.6 REMARK 620 4 CYS A 256 SG 108.4 119.5 114.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 950 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PD0 RELATED DB: PDB REMARK 900 RELATED ID: 1PD1 RELATED DB: PDB DBREF 1PCX A 117 926 UNP P40482 SEC24_YEAST 117 926 DBREF 1PCX B 483 490 UNP P22804 BET1_YEAST 51 58 SEQRES 1 A 810 ALA ALA PRO ALA TYR GLY GLN PRO SER ALA ALA MET GLY SEQRES 2 A 810 GLN ASN MET ARG PRO MET ASN GLN LEU TYR PRO ILE ASP SEQRES 3 A 810 LEU LEU THR GLU LEU PRO PRO PRO ILE THR ASP LEU THR SEQRES 4 A 810 LEU PRO PRO PRO PRO LEU VAL ILE PRO PRO GLU ARG MET SEQRES 5 A 810 LEU VAL PRO SER GLU LEU SER ASN ALA SER PRO ASP TYR SEQRES 6 A 810 ILE ARG SER THR LEU ASN ALA VAL PRO LYS ASN SER SER SEQRES 7 A 810 LEU LEU LYS LYS SER LYS LEU PRO PHE GLY LEU VAL ILE SEQRES 8 A 810 ARG PRO TYR GLN HIS LEU TYR ASP ASP ILE ASP PRO PRO SEQRES 9 A 810 PRO LEU ASN GLU ASP GLY LEU ILE VAL ARG CYS ARG ARG SEQRES 10 A 810 CYS ARG SER TYR MET ASN PRO PHE VAL THR PHE ILE GLU SEQRES 11 A 810 GLN GLY ARG ARG TRP ARG CYS ASN PHE CYS ARG LEU ALA SEQRES 12 A 810 ASN ASP VAL PRO MET GLN MET ASP GLN SER ASP PRO ASN SEQRES 13 A 810 ASP PRO LYS SER ARG TYR ASP ARG ASN GLU ILE LYS CYS SEQRES 14 A 810 ALA VAL MET GLU TYR MET ALA PRO LYS GLU TYR THR LEU SEQRES 15 A 810 ARG GLN PRO PRO PRO ALA THR TYR CYS PHE LEU ILE ASP SEQRES 16 A 810 VAL SER GLN SER SER ILE LYS SER GLY LEU LEU ALA THR SEQRES 17 A 810 THR ILE ASN THR LEU LEU GLN ASN LEU ASP SER ILE PRO SEQRES 18 A 810 ASN HIS ASP GLU ARG THR ARG ILE SER ILE LEU CYS VAL SEQRES 19 A 810 ASP ASN ALA ILE HIS TYR PHE LYS ILE PRO LEU ASP SER SEQRES 20 A 810 GLU ASN ASN GLU GLU SER ALA ASP GLN ILE ASN MET MET SEQRES 21 A 810 ASP ILE ALA ASP LEU GLU GLU PRO PHE LEU PRO ARG PRO SEQRES 22 A 810 ASN SER MET VAL VAL SER LEU LYS ALA CYS ARG GLN ASN SEQRES 23 A 810 ILE GLU THR LEU LEU THR LYS ILE PRO GLN ILE PHE GLN SEQRES 24 A 810 SER ASN LEU ILE THR ASN PHE ALA LEU GLY PRO ALA LEU SEQRES 25 A 810 LYS SER ALA TYR HIS LEU ILE GLY GLY VAL GLY GLY LYS SEQRES 26 A 810 ILE ILE VAL VAL SER GLY THR LEU PRO ASN LEU GLY ILE SEQRES 27 A 810 GLY LYS LEU GLN ARG ARG ASN GLU SER GLY VAL VAL ASN SEQRES 28 A 810 THR SER LYS GLU THR ALA GLN LEU LEU SER CYS GLN ASP SEQRES 29 A 810 SER PHE TYR LYS ASN PHE THR ILE ASP CYS SER LYS VAL SEQRES 30 A 810 GLN ILE THR VAL ASP LEU PHE LEU ALA SER GLU ASP TYR SEQRES 31 A 810 MET ASP VAL ALA SER LEU SER ASN LEU SER ARG PHE THR SEQRES 32 A 810 ALA GLY GLN THR HIS PHE TYR PRO GLY PHE SER GLY LYS SEQRES 33 A 810 ASN PRO ASN ASP ILE VAL LYS PHE SER THR GLU PHE ALA SEQRES 34 A 810 LYS HIS ILE SER MET ASP PHE CYS MET GLU THR VAL MET SEQRES 35 A 810 ARG ALA ARG GLY SER THR GLY LEU ARG MET SER ARG PHE SEQRES 36 A 810 TYR GLY HIS PHE PHE ASN ARG SER SER ASP LEU CYS ALA SEQRES 37 A 810 PHE SER THR MET PRO ARG ASP GLN SER TYR LEU PHE GLU SEQRES 38 A 810 VAL ASN VAL ASP GLU SER ILE MET ALA ASP TYR CYS TYR SEQRES 39 A 810 VAL GLN VAL ALA VAL LEU LEU SER LEU ASN ASN SER GLN SEQRES 40 A 810 ARG ARG ILE ARG ILE ILE THR LEU ALA MET PRO THR THR SEQRES 41 A 810 GLU SER LEU ALA GLU VAL TYR ALA SER ALA ASP GLN LEU SEQRES 42 A 810 ALA ILE ALA SER PHE TYR ASN SER LYS ALA VAL GLU LYS SEQRES 43 A 810 ALA LEU ASN SER SER LEU ASP ASP ALA ARG VAL LEU ILE SEQRES 44 A 810 ASN LYS SER VAL GLN ASP ILE LEU ALA THR TYR LYS LYS SEQRES 45 A 810 GLU ILE VAL VAL SER ASN THR ALA GLY GLY ALA PRO LEU SEQRES 46 A 810 ARG LEU CYS ALA ASN LEU ARG MET PHE PRO LEU LEU MET SEQRES 47 A 810 HIS SER LEU THR LYS HIS MET ALA PHE ARG SER GLY ILE SEQRES 48 A 810 VAL PRO SER ASP HIS ARG ALA SER ALA LEU ASN ASN LEU SEQRES 49 A 810 GLU SER LEU PRO LEU LYS TYR LEU ILE LYS ASN ILE TYR SEQRES 50 A 810 PRO ASP VAL TYR SER LEU HIS ASP MET ALA ASP GLU ALA SEQRES 51 A 810 GLY LEU PRO VAL GLN THR GLU ASP GLY GLU ALA THR GLY SEQRES 52 A 810 THR ILE VAL LEU PRO GLN PRO ILE ASN ALA THR SER SER SEQRES 53 A 810 LEU PHE GLU ARG TYR GLY LEU TYR LEU ILE ASP ASN GLY SEQRES 54 A 810 ASN GLU LEU PHE LEU TRP MET GLY GLY ASP ALA VAL PRO SEQRES 55 A 810 ALA LEU VAL PHE ASP VAL PHE GLY THR GLN ASP ILE PHE SEQRES 56 A 810 ASP ILE PRO ILE GLY LYS GLN GLU ILE PRO VAL VAL GLU SEQRES 57 A 810 ASN SER GLU PHE ASN GLN ARG VAL ARG ASN ILE ILE ASN SEQRES 58 A 810 GLN LEU ARG ASN HIS ASP ASP VAL ILE THR TYR GLN SER SEQRES 59 A 810 LEU TYR ILE VAL ARG GLY ALA SER LEU SER GLU PRO VAL SEQRES 60 A 810 ASN HIS ALA SER ALA ARG GLU VAL ALA THR LEU ARG LEU SEQRES 61 A 810 TRP ALA SER SER THR LEU VAL GLU ASP LYS ILE LEU ASN SEQRES 62 A 810 ASN GLU SER TYR ARG GLU PHE LEU GLN ILE MET LYS ALA SEQRES 63 A 810 ARG ILE SER LYS SEQRES 1 B 8 LEU ALA SER LEU GLU SER GLN SER HET ZN A 950 1 HETNAM ZN ZINC ION FORMUL 3 ZN ZN 2+ FORMUL 4 HOH *164(H2 O) HELIX 1 1 LEU A 144 GLU A 146 5 3 HELIX 2 2 PRO A 150 LEU A 156 5 7 HELIX 3 3 PRO A 164 MET A 168 5 5 HELIX 4 4 SER A 172 ASN A 176 5 5 HELIX 5 5 ASN A 192 LYS A 200 1 9 HELIX 6 6 PRO A 263 GLN A 268 5 6 HELIX 7 7 SER A 276 ASP A 279 5 4 HELIX 8 8 ARG A 280 CYS A 285 1 6 HELIX 9 9 PRO A 293 THR A 297 5 5 HELIX 10 10 SER A 313 GLY A 320 1 8 HELIX 11 11 GLY A 320 LEU A 333 1 14 HELIX 12 12 LEU A 361 ASN A 365 5 5 HELIX 13 13 CYS A 399 PHE A 414 1 16 HELIX 14 14 ALA A 423 GLY A 436 1 14 HELIX 15 15 SER A 481 VAL A 493 1 13 HELIX 16 16 ASP A 508 PHE A 518 1 11 HELIX 17 17 ASN A 533 MET A 550 1 18 HELIX 18 18 SER A 638 SER A 645 1 8 HELIX 19 19 ASP A 647 SER A 666 1 20 HELIX 20 20 SER A 667 ILE A 690 1 24 HELIX 21 21 ASN A 706 ARG A 708 5 3 HELIX 22 22 MET A 709 LYS A 719 1 11 HELIX 23 23 PRO A 729 LEU A 743 1 15 HELIX 24 24 PRO A 744 TYR A 753 1 10 HELIX 25 25 VAL A 817 GLY A 826 1 10 HELIX 26 26 ASP A 829 ILE A 833 5 5 HELIX 27 27 SER A 846 ASN A 861 1 16 HELIX 28 28 ASN A 884 SER A 900 1 17 HELIX 29 29 SER A 912 ILE A 924 1 13 HELIX 30 30 LEU B 483 GLN B 489 1 7 SHEET 1 A 2 PRO A 140 ASP A 142 0 SHEET 2 A 2 ARG A 702 CYS A 704 -1 O LEU A 703 N ILE A 141 SHEET 1 B 4 ILE A 182 SER A 184 0 SHEET 2 B 4 GLY A 204 ILE A 207 -1 O VAL A 206 N ARG A 183 SHEET 3 B 4 TYR A 594 VAL A 600 -1 O PHE A 596 N LEU A 205 SHEET 4 B 4 LEU A 566 TYR A 572 -1 N ARG A 567 O ASN A 599 SHEET 1 C 4 VAL A 189 PRO A 190 0 SHEET 2 C 4 ARG A 624 THR A 636 1 O PRO A 634 N VAL A 189 SHEET 3 C 4 VAL A 287 MET A 291 -1 N MET A 288 O ILE A 628 SHEET 4 C 4 LEU A 222 ASN A 223 1 N ASN A 223 O GLU A 289 SHEET 1 D 5 VAL A 189 PRO A 190 0 SHEET 2 D 5 ARG A 624 THR A 636 1 O PRO A 634 N VAL A 189 SHEET 3 D 5 TYR A 608 SER A 618 -1 N VAL A 613 O ILE A 629 SHEET 4 D 5 MET A 554 GLY A 562 -1 N ARG A 561 O GLN A 612 SHEET 5 D 5 LEU A 582 PHE A 585 -1 O PHE A 585 N THR A 556 SHEET 1 E 3 THR A 243 ILE A 245 0 SHEET 2 E 3 ARG A 250 ARG A 252 -1 O ARG A 252 N THR A 243 SHEET 3 E 3 ALA A 259 ASP A 261 -1 O ASN A 260 N TRP A 251 SHEET 1 F 4 ASN A 374 MET A 376 0 SHEET 2 F 4 ILE A 354 LYS A 358 -1 N TYR A 356 O MET A 376 SHEET 3 F 4 ARG A 344 VAL A 350 -1 N CYS A 349 O HIS A 355 SHEET 4 F 4 VAL A 394 SER A 395 -1 O VAL A 394 N ILE A 345 SHEET 1 G 7 ASN A 374 MET A 376 0 SHEET 2 G 7 ILE A 354 LYS A 358 -1 N TYR A 356 O MET A 376 SHEET 3 G 7 ARG A 344 VAL A 350 -1 N CYS A 349 O HIS A 355 SHEET 4 G 7 THR A 305 ASP A 311 1 N ILE A 310 O LEU A 348 SHEET 5 G 7 GLY A 440 SER A 446 1 O ILE A 443 N CYS A 307 SHEET 6 G 7 ILE A 495 SER A 503 1 O ASP A 498 N VAL A 444 SHEET 7 G 7 THR A 523 PRO A 527 1 O TYR A 526 N LEU A 501 SHEET 1 H 5 ASP A 755 SER A 758 0 SHEET 2 H 5 LEU A 799 ASP A 803 -1 O LEU A 801 N TYR A 757 SHEET 3 H 5 GLU A 807 MET A 812 -1 O TRP A 811 N TYR A 800 SHEET 4 H 5 SER A 870 ARG A 875 1 O TYR A 872 N LEU A 810 SHEET 5 H 5 GLY A 836 LYS A 837 -1 N GLY A 836 O ILE A 873 LINK SG CYS A 231 ZN ZN A 950 1555 1555 2.43 LINK SG CYS A 234 ZN ZN A 950 1555 1555 2.40 LINK SG CYS A 253 ZN ZN A 950 1555 1555 2.39 LINK SG CYS A 256 ZN ZN A 950 1555 1555 2.23 CISPEP 1 LEU A 147 PRO A 148 0 -0.21 SITE 1 AC1 4 CYS A 231 CYS A 234 CYS A 253 CYS A 256 CRYST1 94.930 94.930 198.574 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010534 0.006082 0.000000 0.00000 SCALE2 0.000000 0.012164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005036 0.00000