HEADER LYASE 30-MAY-03 1PIX TITLE CRYSTAL STRUCTURE OF THE CARBOXYLTRANSFERASE SUBUNIT OF THE BACTERIAL TITLE 2 ION PUMP GLUTACONYL-COENZYME A DECARBOXYLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTACONYL-COA DECARBOXYLASE A SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CARBOXYLTRANSFERASE; COMPND 5 EC: 4.1.1.70; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDAMINOCOCCUS FERMENTANS; SOURCE 3 ORGANISM_TAXID: 905; SOURCE 4 GENE: GCDA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: DH5ALPHA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PJF118HE KEYWDS DECARBOXYLASE, BIOTIN-DEPENDENT ION PUMP, CARBOXYLTRANSFERASE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR K.S.WENDT,I.SCHALL,R.HUBER,W.BUCKEL,U.JACOB REVDAT 3 14-FEB-24 1PIX 1 REMARK REVDAT 2 24-FEB-09 1PIX 1 VERSN REVDAT 1 05-AUG-03 1PIX 0 JRNL AUTH K.S.WENDT,I.SCHALL,R.HUBER,W.BUCKEL,U.JACOB JRNL TITL CRYSTAL STRUCTURE OF THE CARBOXYLTRANSFERASE SUBUNIT OF THE JRNL TITL 2 BACTERIAL SODIUM ION PUMP GLUTACONYL-COENZYME A JRNL TITL 3 DECARBOXYLASE JRNL REF EMBO J. V. 22 3493 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 12853465 JRNL DOI 10.1093/EMBOJ/CDG358 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 95460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4780 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9019 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 37 REMARK 3 SOLVENT ATOMS : 661 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000019344. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MPG/DESY, HAMBURG REMARK 200 BEAMLINE : BW6 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0500 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 95460 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.06900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 13.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ACETATE BUFFER, SODIUM FORMATE, PH REMARK 280 4.7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 81.50000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 75.93450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 75.93450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.75000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 75.93450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 75.93450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 122.25000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 75.93450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 75.93450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.75000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 75.93450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 75.93450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 122.25000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 81.50000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS GENERATED BY THE TWO MONOMERS IN REMARK 300 THE ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 43650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -136.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 73880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -305.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 151.86900 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 151.86900 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 81.50000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 221 CG SD CE REMARK 470 MET A 224 CG SD CE REMARK 470 ASN A 225 CG OD1 ND2 REMARK 470 PRO A 226 CG CD REMARK 470 LYS A 227 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 540 O HOH A 1167 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 5 66.33 36.58 REMARK 500 LYS A 20 -67.84 -93.95 REMARK 500 ASN A 83 60.87 -159.56 REMARK 500 ASN A 147 69.55 -164.24 REMARK 500 PHE A 153 -33.44 -38.91 REMARK 500 ASN A 162 161.98 73.92 REMARK 500 ALA A 193 -116.15 49.26 REMARK 500 ALA A 218 -29.41 78.04 REMARK 500 MET A 221 36.90 33.73 REMARK 500 PRO A 226 -178.35 61.87 REMARK 500 GLU A 237 -40.70 -157.46 REMARK 500 ARG A 244 25.35 -74.41 REMARK 500 THR A 245 -48.48 -147.39 REMARK 500 THR A 248 106.13 -169.73 REMARK 500 ILE A 256 -60.70 -100.08 REMARK 500 TYR A 258 -62.98 -108.77 REMARK 500 ASP A 316 2.25 -68.61 REMARK 500 ASN A 332 22.66 48.66 REMARK 500 TYR A 387 -166.57 -123.66 REMARK 500 ASP A 413 82.34 -168.79 REMARK 500 ARG A 452 -96.67 -132.28 REMARK 500 ALA A 456 -155.67 51.49 REMARK 500 PHE A 473 169.93 173.49 REMARK 500 ASN A 561 64.35 -158.39 REMARK 500 LYS A 585 98.60 -68.80 REMARK 500 MET B 5 64.93 36.15 REMARK 500 LYS B 20 -76.75 -67.93 REMARK 500 ARG B 57 49.60 -108.79 REMARK 500 ASN B 83 61.50 -161.20 REMARK 500 ASN B 147 69.35 -163.29 REMARK 500 PHE B 153 -37.06 -38.48 REMARK 500 GLU B 155 29.03 -142.76 REMARK 500 PRO B 161 -159.75 -93.65 REMARK 500 ASN B 162 162.58 76.05 REMARK 500 ALA B 193 -117.00 50.14 REMARK 500 MET B 221 30.91 -87.59 REMARK 500 ILE B 256 -63.49 -104.65 REMARK 500 GLU B 260 -71.50 -87.75 REMARK 500 ASP B 316 5.78 -68.04 REMARK 500 ASP B 331 128.44 -39.92 REMARK 500 ASN B 332 25.03 45.63 REMARK 500 TYR B 387 -167.54 -118.19 REMARK 500 ASP B 413 81.23 -168.18 REMARK 500 ARG B 452 -94.53 -135.42 REMARK 500 ALA B 456 -167.39 53.54 REMARK 500 PHE B 473 169.23 172.57 REMARK 500 ASN B 561 65.89 -153.34 REMARK 500 LYS B 585 95.94 -69.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 2008 DBREF 1PIX A 0 586 UNP Q06700 GCDA_ACIFE 1 587 DBREF 1PIX B 0 586 UNP Q06700 GCDA_ACIFE 1 587 SEQRES 1 A 587 MET GLY PHE TYR SER MET PRO ARG TYR PHE GLN ASN MET SEQRES 2 A 587 PRO GLN VAL GLY LYS PRO LEU LYS LYS ALA ASP ALA ALA SEQRES 3 A 587 ASN GLU GLU GLN LEU LYS LYS ILE GLU GLU GLU ILE HIS SEQRES 4 A 587 GLN LEU ILE LYS GLU ALA GLN GLU ALA GLY LYS ALA ASP SEQRES 5 A 587 ALA ASP VAL ASN LYS ARG GLY GLU LEU THR ALA LEU GLN SEQRES 6 A 587 ARG ILE GLU LYS LEU VAL GLU PRO GLY SER TRP ARG PRO SEQRES 7 A 587 LEU ASN THR LEU PHE ASN PRO GLN GLY ASN LYS ASN GLY SEQRES 8 A 587 SER VAL ALA ILE VAL LYS GLY LEU GLY ARG VAL ASN GLY SEQRES 9 A 587 LYS TRP CYS VAL VAL VAL ALA SER ASP ASN LYS LYS LEU SEQRES 10 A 587 ALA GLY ALA TRP VAL PRO GLY GLN ALA GLU CYS LEU LEU SEQRES 11 A 587 ARG ALA SER ASP THR ALA LYS THR LEU HIS VAL PRO LEU SEQRES 12 A 587 VAL TYR VAL LEU ASN CYS SER GLY VAL LYS PHE ASP GLU SEQRES 13 A 587 GLN GLU LYS VAL TYR PRO ASN ARG ARG GLY GLY GLY THR SEQRES 14 A 587 PRO PHE PHE ARG ASN ALA GLU LEU ASN GLN LEU GLY ILE SEQRES 15 A 587 PRO VAL ILE VAL GLY ILE TYR GLY THR ASN PRO ALA GLY SEQRES 16 A 587 GLY GLY TYR HIS SER ILE SER PRO THR VAL ILE ILE ALA SEQRES 17 A 587 HIS GLU LYS ALA ASN MET ALA VAL GLY GLY ALA GLY ILE SEQRES 18 A 587 MET GLY GLY MET ASN PRO LYS GLY HIS VAL ASP LEU GLU SEQRES 19 A 587 TYR ALA ASN GLU ILE ALA ASP MET VAL ASP ARG THR GLY SEQRES 20 A 587 LYS THR GLU PRO PRO GLY ALA VAL ASP ILE HIS TYR THR SEQRES 21 A 587 GLU THR GLY PHE MET ARG GLU VAL TYR ALA SER GLU GLU SEQRES 22 A 587 GLY VAL LEU GLU GLY ILE LYS LYS TYR VAL GLY MET LEU SEQRES 23 A 587 PRO LYS TYR ASP PRO GLU PHE PHE ARG VAL ASP ASP PRO SEQRES 24 A 587 LYS ALA PRO ALA PHE PRO ALA ASP ASP LEU TYR SER MET SEQRES 25 A 587 VAL PRO LEU ASN ASP LYS ARG ALA TYR ASP ILE TYR ASN SEQRES 26 A 587 VAL ILE ALA ARG LEU PHE ASP ASN SER GLU LEU HIS GLU SEQRES 27 A 587 TYR LYS LYS GLY TYR GLY PRO GLU MET VAL THR GLY LEU SEQRES 28 A 587 ALA LYS VAL ASN GLY LEU LEU VAL GLY VAL VAL ALA ASN SEQRES 29 A 587 VAL GLN GLY LEU LEU MET ASN TYR PRO GLU TYR LYS ALA SEQRES 30 A 587 ALA GLY SER VAL GLY ILE GLY GLY LYS LEU TYR ARG GLN SEQRES 31 A 587 GLY LEU VAL LYS MET ASN GLU PHE VAL THR LEU CYS ALA SEQRES 32 A 587 ARG ASP ARG LEU PRO ILE VAL TRP ILE GLN ASP THR THR SEQRES 33 A 587 GLY ILE ASP VAL GLY ASN ASP ALA GLU LYS ALA GLU LEU SEQRES 34 A 587 LEU GLY LEU GLY GLN SER LEU ILE TYR SER ILE GLN THR SEQRES 35 A 587 SER HIS ILE PRO GLN PHE GLU ILE THR LEU ARG LYS GLY SEQRES 36 A 587 THR ALA ALA ALA HIS TYR VAL LEU GLY GLY PRO GLN GLY SEQRES 37 A 587 ASN ASP THR ASN ALA PHE SER ILE GLY THR ALA ALA THR SEQRES 38 A 587 GLU ILE ALA VAL MET ASN GLY GLU THR ALA ALA THR ALA SEQRES 39 A 587 MET TYR SER ARG ARG LEU ALA LYS ASP ARG LYS ALA GLY SEQRES 40 A 587 LYS ASP LEU GLN PRO THR ILE ASP LYS MET ASN ASN LEU SEQRES 41 A 587 ILE GLN ALA PHE TYR THR LYS SER ARG PRO LYS VAL CYS SEQRES 42 A 587 ALA GLU LEU GLY LEU VAL ASP GLU ILE VAL ASP MET ASN SEQRES 43 A 587 LYS ILE ARG GLY TYR VAL GLU ALA PHE THR GLU ALA ALA SEQRES 44 A 587 TYR GLN ASN PRO GLU SER ILE CYS PRO PHE HIS GLN MET SEQRES 45 A 587 ILE LEU PRO ARG ALA ILE ARG GLU PHE GLU THR PHE VAL SEQRES 46 A 587 LYS LYS SEQRES 1 B 587 MET GLY PHE TYR SER MET PRO ARG TYR PHE GLN ASN MET SEQRES 2 B 587 PRO GLN VAL GLY LYS PRO LEU LYS LYS ALA ASP ALA ALA SEQRES 3 B 587 ASN GLU GLU GLN LEU LYS LYS ILE GLU GLU GLU ILE HIS SEQRES 4 B 587 GLN LEU ILE LYS GLU ALA GLN GLU ALA GLY LYS ALA ASP SEQRES 5 B 587 ALA ASP VAL ASN LYS ARG GLY GLU LEU THR ALA LEU GLN SEQRES 6 B 587 ARG ILE GLU LYS LEU VAL GLU PRO GLY SER TRP ARG PRO SEQRES 7 B 587 LEU ASN THR LEU PHE ASN PRO GLN GLY ASN LYS ASN GLY SEQRES 8 B 587 SER VAL ALA ILE VAL LYS GLY LEU GLY ARG VAL ASN GLY SEQRES 9 B 587 LYS TRP CYS VAL VAL VAL ALA SER ASP ASN LYS LYS LEU SEQRES 10 B 587 ALA GLY ALA TRP VAL PRO GLY GLN ALA GLU CYS LEU LEU SEQRES 11 B 587 ARG ALA SER ASP THR ALA LYS THR LEU HIS VAL PRO LEU SEQRES 12 B 587 VAL TYR VAL LEU ASN CYS SER GLY VAL LYS PHE ASP GLU SEQRES 13 B 587 GLN GLU LYS VAL TYR PRO ASN ARG ARG GLY GLY GLY THR SEQRES 14 B 587 PRO PHE PHE ARG ASN ALA GLU LEU ASN GLN LEU GLY ILE SEQRES 15 B 587 PRO VAL ILE VAL GLY ILE TYR GLY THR ASN PRO ALA GLY SEQRES 16 B 587 GLY GLY TYR HIS SER ILE SER PRO THR VAL ILE ILE ALA SEQRES 17 B 587 HIS GLU LYS ALA ASN MET ALA VAL GLY GLY ALA GLY ILE SEQRES 18 B 587 MET GLY GLY MET ASN PRO LYS GLY HIS VAL ASP LEU GLU SEQRES 19 B 587 TYR ALA ASN GLU ILE ALA ASP MET VAL ASP ARG THR GLY SEQRES 20 B 587 LYS THR GLU PRO PRO GLY ALA VAL ASP ILE HIS TYR THR SEQRES 21 B 587 GLU THR GLY PHE MET ARG GLU VAL TYR ALA SER GLU GLU SEQRES 22 B 587 GLY VAL LEU GLU GLY ILE LYS LYS TYR VAL GLY MET LEU SEQRES 23 B 587 PRO LYS TYR ASP PRO GLU PHE PHE ARG VAL ASP ASP PRO SEQRES 24 B 587 LYS ALA PRO ALA PHE PRO ALA ASP ASP LEU TYR SER MET SEQRES 25 B 587 VAL PRO LEU ASN ASP LYS ARG ALA TYR ASP ILE TYR ASN SEQRES 26 B 587 VAL ILE ALA ARG LEU PHE ASP ASN SER GLU LEU HIS GLU SEQRES 27 B 587 TYR LYS LYS GLY TYR GLY PRO GLU MET VAL THR GLY LEU SEQRES 28 B 587 ALA LYS VAL ASN GLY LEU LEU VAL GLY VAL VAL ALA ASN SEQRES 29 B 587 VAL GLN GLY LEU LEU MET ASN TYR PRO GLU TYR LYS ALA SEQRES 30 B 587 ALA GLY SER VAL GLY ILE GLY GLY LYS LEU TYR ARG GLN SEQRES 31 B 587 GLY LEU VAL LYS MET ASN GLU PHE VAL THR LEU CYS ALA SEQRES 32 B 587 ARG ASP ARG LEU PRO ILE VAL TRP ILE GLN ASP THR THR SEQRES 33 B 587 GLY ILE ASP VAL GLY ASN ASP ALA GLU LYS ALA GLU LEU SEQRES 34 B 587 LEU GLY LEU GLY GLN SER LEU ILE TYR SER ILE GLN THR SEQRES 35 B 587 SER HIS ILE PRO GLN PHE GLU ILE THR LEU ARG LYS GLY SEQRES 36 B 587 THR ALA ALA ALA HIS TYR VAL LEU GLY GLY PRO GLN GLY SEQRES 37 B 587 ASN ASP THR ASN ALA PHE SER ILE GLY THR ALA ALA THR SEQRES 38 B 587 GLU ILE ALA VAL MET ASN GLY GLU THR ALA ALA THR ALA SEQRES 39 B 587 MET TYR SER ARG ARG LEU ALA LYS ASP ARG LYS ALA GLY SEQRES 40 B 587 LYS ASP LEU GLN PRO THR ILE ASP LYS MET ASN ASN LEU SEQRES 41 B 587 ILE GLN ALA PHE TYR THR LYS SER ARG PRO LYS VAL CYS SEQRES 42 B 587 ALA GLU LEU GLY LEU VAL ASP GLU ILE VAL ASP MET ASN SEQRES 43 B 587 LYS ILE ARG GLY TYR VAL GLU ALA PHE THR GLU ALA ALA SEQRES 44 B 587 TYR GLN ASN PRO GLU SER ILE CYS PRO PHE HIS GLN MET SEQRES 45 B 587 ILE LEU PRO ARG ALA ILE ARG GLU PHE GLU THR PHE VAL SEQRES 46 B 587 LYS LYS HET SO4 A2001 5 HET SO4 A2002 5 HET FMT A2006 3 HET FMT A2007 3 HET FMT A2008 3 HET SO4 B2000 5 HET SO4 B2003 5 HET SO4 B2004 5 HET FMT B2005 3 HETNAM SO4 SULFATE ION HETNAM FMT FORMIC ACID FORMUL 3 SO4 5(O4 S 2-) FORMUL 5 FMT 4(C H2 O2) FORMUL 12 HOH *661(H2 O) HELIX 1 1 MET A 5 GLN A 10 1 6 HELIX 2 2 ASP A 23 ALA A 47 1 25 HELIX 3 3 ALA A 50 ARG A 57 1 8 HELIX 4 4 THR A 61 VAL A 70 1 10 HELIX 5 5 GLY A 123 HIS A 139 1 17 HELIX 6 6 GLU A 155 TYR A 160 1 6 HELIX 7 7 GLY A 167 LEU A 179 1 13 HELIX 8 8 ALA A 193 SER A 201 1 9 HELIX 9 9 ASP A 231 ARG A 244 1 14 HELIX 10 10 ALA A 253 TYR A 258 1 6 HELIX 11 11 SER A 270 MET A 284 1 15 HELIX 12 12 ASP A 289 ARG A 294 5 6 HELIX 13 13 PRO A 304 ASP A 306 5 3 HELIX 14 14 ASP A 307 VAL A 312 1 6 HELIX 15 15 ASP A 321 ARG A 328 1 8 HELIX 16 16 LEU A 329 LEU A 329 5 1 HELIX 17 17 PHE A 330 GLU A 334 5 5 HELIX 18 18 TYR A 387 ASP A 404 1 18 HELIX 19 19 GLY A 420 ALA A 426 1 7 HELIX 20 20 GLU A 427 THR A 441 1 15 HELIX 21 21 ALA A 457 LEU A 462 1 6 HELIX 22 22 ASN A 486 ALA A 505 1 20 HELIX 23 23 LEU A 509 LYS A 526 1 18 HELIX 24 24 ARG A 528 GLY A 536 1 9 HELIX 25 25 LYS A 546 TYR A 559 1 14 HELIX 26 26 PRO A 567 MET A 571 5 5 HELIX 27 27 ILE A 572 PHE A 583 1 12 HELIX 28 28 MET B 5 GLN B 10 1 6 HELIX 29 29 ASP B 23 ALA B 47 1 25 HELIX 30 30 ALA B 50 ARG B 57 1 8 HELIX 31 31 THR B 61 VAL B 70 1 10 HELIX 32 32 LYS B 115 ALA B 119 5 5 HELIX 33 33 GLY B 123 HIS B 139 1 17 HELIX 34 34 LYS B 152 ASP B 154 5 3 HELIX 35 35 GLU B 155 TYR B 160 1 6 HELIX 36 36 GLY B 167 LEU B 179 1 13 HELIX 37 37 ALA B 193 SER B 201 1 9 HELIX 38 38 ASP B 231 GLY B 246 1 16 HELIX 39 39 ALA B 253 TYR B 258 1 6 HELIX 40 40 SER B 270 LEU B 285 1 16 HELIX 41 41 ASP B 289 ARG B 294 5 6 HELIX 42 42 PRO B 304 ASP B 306 5 3 HELIX 43 43 ASP B 307 VAL B 312 1 6 HELIX 44 44 ASP B 321 ARG B 328 1 8 HELIX 45 45 LEU B 329 LEU B 329 5 1 HELIX 46 46 PHE B 330 GLU B 334 5 5 HELIX 47 47 TYR B 387 ASP B 404 1 18 HELIX 48 48 GLY B 420 ALA B 426 1 7 HELIX 49 49 GLU B 427 THR B 441 1 15 HELIX 50 50 ALA B 457 LEU B 462 1 6 HELIX 51 51 ASN B 486 ALA B 505 1 20 HELIX 52 52 LEU B 509 LYS B 526 1 18 HELIX 53 53 ARG B 528 LEU B 535 1 8 HELIX 54 54 ASP B 543 ASN B 545 5 3 HELIX 55 55 LYS B 546 TYR B 559 1 14 HELIX 56 56 PRO B 567 MET B 571 5 5 HELIX 57 57 ILE B 572 PHE B 583 1 12 SHEET 1 A 7 ARG A 76 LEU A 78 0 SHEET 2 A 7 ILE A 94 VAL A 101 -1 O LEU A 98 N ARG A 76 SHEET 3 A 7 LYS A 104 SER A 111 -1 O VAL A 108 N GLY A 97 SHEET 4 A 7 LEU A 142 LEU A 146 1 O VAL A 143 N VAL A 107 SHEET 5 A 7 VAL A 183 ILE A 187 1 O ILE A 184 N TYR A 144 SHEET 6 A 7 VAL A 204 HIS A 208 1 O ILE A 206 N VAL A 185 SHEET 7 A 7 GLU A 266 TYR A 268 1 O GLU A 266 N ALA A 207 SHEET 1 B 2 ALA A 119 TRP A 120 0 SHEET 2 B 2 GLY A 150 VAL A 151 1 O GLY A 150 N TRP A 120 SHEET 1 C 2 THR A 190 PRO A 192 0 SHEET 2 C 2 ASN A 212 ALA A 214 1 O ALA A 214 N ASN A 191 SHEET 1 D 7 HIS A 336 GLU A 337 0 SHEET 2 D 7 MET A 346 VAL A 353 -1 O LEU A 350 N HIS A 336 SHEET 3 D 7 LEU A 356 ASN A 363 -1 O ALA A 362 N VAL A 347 SHEET 4 D 7 ILE A 408 GLN A 412 1 O ILE A 411 N VAL A 361 SHEET 5 D 7 GLN A 446 THR A 450 1 O PHE A 447 N TRP A 410 SHEET 6 D 7 ASN A 471 GLY A 476 1 O ILE A 475 N THR A 450 SHEET 7 D 7 GLU A 540 ILE A 541 1 O GLU A 540 N GLY A 476 SHEET 1 E 2 LEU A 367 LEU A 368 0 SHEET 2 E 2 GLY A 381 ILE A 382 -1 O GLY A 381 N LEU A 368 SHEET 1 F 2 LYS A 385 LEU A 386 0 SHEET 2 F 2 GLY A 416 ILE A 417 1 O GLY A 416 N LEU A 386 SHEET 1 G 2 LYS A 453 THR A 455 0 SHEET 2 G 2 GLU A 481 ALA A 483 1 O GLU A 481 N GLY A 454 SHEET 1 H 7 ARG B 76 LEU B 78 0 SHEET 2 H 7 ILE B 94 VAL B 101 -1 O LEU B 98 N ARG B 76 SHEET 3 H 7 LYS B 104 SER B 111 -1 O LYS B 104 N VAL B 101 SHEET 4 H 7 LEU B 142 LEU B 146 1 O VAL B 143 N VAL B 107 SHEET 5 H 7 VAL B 183 ILE B 187 1 O ILE B 184 N TYR B 144 SHEET 6 H 7 VAL B 204 HIS B 208 1 O ILE B 206 N ILE B 187 SHEET 7 H 7 GLU B 266 TYR B 268 1 O GLU B 266 N ALA B 207 SHEET 1 I 2 THR B 190 PRO B 192 0 SHEET 2 I 2 ASN B 212 ALA B 214 1 O ALA B 214 N ASN B 191 SHEET 1 J 7 HIS B 336 GLU B 337 0 SHEET 2 J 7 MET B 346 VAL B 353 -1 O LEU B 350 N HIS B 336 SHEET 3 J 7 LEU B 356 ASN B 363 -1 O LEU B 356 N VAL B 353 SHEET 4 J 7 ILE B 408 GLN B 412 1 O ILE B 411 N VAL B 361 SHEET 5 J 7 GLN B 446 THR B 450 1 O ILE B 449 N TRP B 410 SHEET 6 J 7 ASN B 471 GLY B 476 1 O ALA B 472 N GLN B 446 SHEET 7 J 7 GLU B 540 ILE B 541 1 O GLU B 540 N GLY B 476 SHEET 1 K 2 LEU B 367 LEU B 368 0 SHEET 2 K 2 GLY B 381 ILE B 382 -1 O GLY B 381 N LEU B 368 SHEET 1 L 2 LYS B 385 LEU B 386 0 SHEET 2 L 2 GLY B 416 ILE B 417 1 O GLY B 416 N LEU B 386 SHEET 1 M 2 LYS B 453 THR B 455 0 SHEET 2 M 2 GLU B 481 ALA B 483 1 O GLU B 481 N GLY B 454 CISPEP 1 TYR A 371 PRO A 372 0 -0.14 CISPEP 2 TYR B 371 PRO B 372 0 -0.24 SITE 1 AC1 11 ARG A 164 ARG A 172 HOH A1009 HOH A1306 SITE 2 AC1 11 ARG B 164 ARG B 172 HOH B1110 HOH B1260 SITE 3 AC1 11 HOH B1305 HOH B1435 HOH B1573 SITE 1 AC2 4 TYR A 268 ALA A 269 SER A 270 GLY A 273 SITE 1 AC3 5 GLU A 46 ALA A 50 ASP A 51 LYS A 114 SITE 2 AC3 5 HOH A1643 SITE 1 AC4 5 GLU B 46 ALA B 50 ASP B 51 LYS B 114 SITE 2 AC4 5 HOH B1096 SITE 1 AC5 5 TYR B 268 ALA B 269 SER B 270 GLY B 273 SITE 2 AC5 5 HOH B1075 SITE 1 AC6 4 THR B 137 HIS B 443 ILE B 444 PRO B 445 SITE 1 AC7 4 THR A 137 ILE A 444 PRO A 445 ASP A 469 SITE 1 AC8 5 ARG A 7 TYR A 8 HIS A 336 ARG A 578 SITE 2 AC8 5 HOH A1480 SITE 1 AC9 4 ALA A 300 ASN A 354 ARG A 548 GLU A 552 CRYST1 151.869 151.869 163.000 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006585 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006585 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006135 0.00000