HEADER    VIRAL PROTEIN                           04-JUN-03   1PJW              
TITLE     SOLUTION STRUCTURE OF THE DOMAIN III OF THE JAPAN ENCEPHALITIS VIRUS  
TITLE    2 ENVELOPE PROTEIN                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: ENVELOPE PROTEIN;                                          
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: DOMAIN III;                                                
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: JAPANESE ENCEPHALITIS VIRUS;                    
SOURCE   3 ORGANISM_TAXID: 11072;                                               
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;                            
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE   6 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE   7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   8 EXPRESSION_SYSTEM_PLASMID: PET22B                                    
KEYWDS    FLAVIVIRUS, JEV, E PROTEIN, EPITOPE MAPPING, VIRAL PROTEIN            
EXPDTA    SOLUTION NMR                                                          
NUMMDL    15                                                                    
AUTHOR    K.P.WU,C.W.WU,Y.P.TSAO,Y.C.LOU,C.W.LIN                                
REVDAT   4   06-NOV-24 1PJW    1       REMARK                                   
REVDAT   3   23-FEB-22 1PJW    1       REMARK                                   
REVDAT   2   24-FEB-09 1PJW    1       VERSN                                    
REVDAT   1   25-NOV-03 1PJW    0                                                
JRNL        AUTH   K.P.WU,C.W.WU,Y.P.TSAO,T.W.KUO,Y.C.LOU,C.W.LIN,S.C.WU,       
JRNL        AUTH 2 J.W.CHENG                                                    
JRNL        TITL   STRUCTURAL BASIS OF A FLAVIVIRUS RECOGNIZED BY ITS           
JRNL        TITL 2 NEUTRALIZING ANTIBODY: SOLUTION STRUCTURE OF THE DOMAIN III  
JRNL        TITL 3 OF THE JAPANESE ENCEPHALITIS VIRUS ENVELOPE PROTEIN.         
JRNL        REF    J.BIOL.CHEM.                  V. 278 46007 2003              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   12952958                                                     
JRNL        DOI    10.1074/JBC.M307776200                                       
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : XWINNMR 2.6, X-PLOR 3.851                            
REMARK   3   AUTHORS     : BO BLANTON (XWINNMR), BRUNGER (X-PLOR)               
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON A TOTAL OF    
REMARK   3  957 RESTRAINTS, 717 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 194       
REMARK   3  DIHEDRAL ANGLE RESTRAINTS,46 DISTANCE RESTRAINTS FROM HYDROGEN      
REMARK   3  BONDS.                                                              
REMARK   4                                                                      
REMARK   4 1PJW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUN-03.                  
REMARK 100 THE DEPOSITION ID IS D_1000019375.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 308                                
REMARK 210  PH                             : 7.5                                
REMARK 210  IONIC STRENGTH                 : NULL                               
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 2.3MM JEV DOMAIN III PROTEIN,      
REMARK 210                                   N15-C13 LABLED AND N15-LABLED,     
REMARK 210                                   136MM NACL, 2.68MM KCL, 10MM       
REMARK 210                                   NA2HPO4, 1.76MM KH2PO4             
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D NOESY; 2D TOCSY; 3D_15N         
REMARK 210                                   -SEPARATED_NOESY; 3D_13C-          
REMARK 210                                   SEPARATED_NOESY; HNHA              
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : DMX                                
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : AURELIA 2.1, NMRPIPE, X-PLOR       
REMARK 210                                   3.851                              
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 15                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH ACCEPTABLE         
REMARK 210                                   COVALENT GEOMETRY, STRUCTURES      
REMARK 210                                   WITH FAVORABLE NON-BOND ENERGY,    
REMARK 210                                   STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS, STRUCTURES   
REMARK 210                                   WITH THE LOWEST ENERGY             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR      
REMARK 210  SPECTROSCOPY.                                                       
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   H    THR A    26     O    THR A    30              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 THR A   9      109.43    -47.56                                   
REMARK 500  1 THR A  14       41.96   -161.56                                   
REMARK 500  1 LEU A  54       29.96     81.47                                   
REMARK 500  1 VAL A  60      -49.08   -143.89                                   
REMARK 500  1 VAL A  66      170.68    -44.65                                   
REMARK 500  1 ASN A  67      157.70    -47.08                                   
REMARK 500  1 LYS A  78       88.86    -62.87                                   
REMARK 500  1 GLU A  84       62.87   -113.43                                   
REMARK 500  1 MET A  96     -150.77   -108.38                                   
REMARK 500  1 ASP A  98     -105.67    -74.98                                   
REMARK 500  1 ALA A 108      152.36    179.76                                   
REMARK 500  2 LYS A   6     -164.03   -106.66                                   
REMARK 500  2 THR A  14       42.12   -160.84                                   
REMARK 500  2 LEU A  54       29.55     81.17                                   
REMARK 500  2 VAL A  60      -36.22   -139.20                                   
REMARK 500  2 VAL A  66      173.30    -47.16                                   
REMARK 500  2 LYS A  78       88.06    -63.21                                   
REMARK 500  2 GLU A  84       68.56   -117.95                                   
REMARK 500  2 ASP A  98     -108.41    -64.00                                   
REMARK 500  2 ALA A 108      131.06   -172.69                                   
REMARK 500  3 TYR A  10      174.47    -46.79                                   
REMARK 500  3 THR A  14       44.04   -161.43                                   
REMARK 500  3 LYS A  16       61.85   -111.48                                   
REMARK 500  3 LEU A  54       30.51     79.53                                   
REMARK 500  3 VAL A  60      -37.37   -148.24                                   
REMARK 500  3 VAL A  66     -170.61    -55.07                                   
REMARK 500  3 LYS A  78       89.56    -64.34                                   
REMARK 500  3 GLU A  84       70.05   -118.07                                   
REMARK 500  3 ASP A  98      -75.58    -71.14                                   
REMARK 500  3 ALA A 108      141.14    179.73                                   
REMARK 500  4 THR A   9      155.42    -46.67                                   
REMARK 500  4 THR A  14      -76.55   -158.24                                   
REMARK 500  4 LYS A  16       81.97    -56.04                                   
REMARK 500  4 LEU A  54       30.76     77.21                                   
REMARK 500  4 VAL A  60      -36.41   -143.86                                   
REMARK 500  4 VAL A  66     -175.02    -57.92                                   
REMARK 500  4 ASN A  67      156.91    -46.93                                   
REMARK 500  4 ALA A  71       65.01    -66.09                                   
REMARK 500  4 LYS A  78       88.33    -62.96                                   
REMARK 500  4 GLU A  84       72.72   -106.57                                   
REMARK 500  4 ASP A  98      -82.82    -65.97                                   
REMARK 500  4 SER A 110     -150.47    -65.15                                   
REMARK 500  5 LEU A   5       73.98   -103.71                                   
REMARK 500  5 THR A   9       76.30   -114.26                                   
REMARK 500  5 THR A  14       61.70   -160.54                                   
REMARK 500  5 LEU A  54       30.39     80.07                                   
REMARK 500  5 VAL A  60      -59.42   -133.83                                   
REMARK 500  5 VAL A  66      171.25    -44.34                                   
REMARK 500  5 ASN A  67      162.20    -46.86                                   
REMARK 500  5 LYS A  78       89.11    -63.92                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     155 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500  1 ARG A  62         0.24    SIDE CHAIN                              
REMARK 500  3 ARG A  62         0.21    SIDE CHAIN                              
REMARK 500  4 ARG A  62         0.24    SIDE CHAIN                              
REMARK 500  5 ARG A  62         0.31    SIDE CHAIN                              
REMARK 500  6 ARG A  62         0.17    SIDE CHAIN                              
REMARK 500  7 ARG A  62         0.31    SIDE CHAIN                              
REMARK 500  8 ARG A  62         0.30    SIDE CHAIN                              
REMARK 500  9 ARG A  62         0.30    SIDE CHAIN                              
REMARK 500 10 ARG A  62         0.30    SIDE CHAIN                              
REMARK 500 11 ARG A  62         0.21    SIDE CHAIN                              
REMARK 500 13 ARG A  62         0.25    SIDE CHAIN                              
REMARK 500 14 ARG A  62         0.26    SIDE CHAIN                              
REMARK 500 15 ARG A  62         0.28    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
DBREF  1PJW A    1   111  UNP    Q9J0X3   Q9J0X3_9FLAV   292    402             
SEQRES   1 A  111  ASP LYS LEU ALA LEU LYS GLY THR THR TYR GLY MET CYS          
SEQRES   2 A  111  THR GLU LYS PHE SER PHE ALA LYS ASN PRO ALA ASP THR          
SEQRES   3 A  111  GLY HIS GLY THR VAL VAL ILE GLU LEU SER TYR SER GLY          
SEQRES   4 A  111  SER ASP GLY PRO CYS LYS ILE PRO ILE VAL SER VAL ALA          
SEQRES   5 A  111  SER LEU ASN ASP MET THR PRO VAL GLY ARG LEU VAL THR          
SEQRES   6 A  111  VAL ASN PRO PHE VAL ALA THR SER SER ALA ASN SER LYS          
SEQRES   7 A  111  VAL LEU VAL GLU MET GLU PRO PRO PHE GLY ASP SER TYR          
SEQRES   8 A  111  ILE VAL VAL GLY MET GLY ASP LYS GLN ILE ASN HIS HIS          
SEQRES   9 A  111  TRP HIS LYS ALA GLY SER THR                                  
SHEET    1   A 3 PHE A  17  ASP A  25  0                                        
SHEET    2   A 3 VAL A  31  TYR A  37 -1  O  VAL A  32   N  ALA A  24           
SHEET    3   A 3 LYS A  78  MET A  83 -1  O  VAL A  81   N  ILE A  33           
SHEET    1   B 3 ILE A  48  ALA A  52  0                                        
SHEET    2   B 3 SER A  90  GLY A  95 -1  O  TYR A  91   N  VAL A  51           
SHEET    3   B 3 GLN A 100  TRP A 105 -1  O  HIS A 103   N  ILE A  92           
SSBOND   1 CYS A   13    CYS A   44                          1555   1555  2.02  
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1