HEADER TOXIN 16-JUN-03 1PP0 TITLE VOLVATOXIN A2 IN MONOCLINIC CRYSTAL COMPND MOL_ID: 1; COMPND 2 MOLECULE: VOLVATOXIN A2; COMPND 3 CHAIN: A, B, C, D SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VOLVARIELLA VOLVACEA; SOURCE 3 ORGANISM_TAXID: 36659 KEYWDS VOLVATOXIN A2, INGOT CRYSTAL FORM, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR S.-C.LIN,Y.-C.LO,J.-Y.LIN,Y.-C.LIAW REVDAT 4 25-OCT-23 1PP0 1 REMARK REVDAT 3 24-FEB-09 1PP0 1 VERSN REVDAT 2 05-OCT-04 1PP0 1 JRNL REVDAT 1 24-AUG-04 1PP0 0 JRNL AUTH S.-C.LIN,Y.-C.LO,J.-Y.LIN,Y.-C.LIAW JRNL TITL CRYSTAL STRUCTURES AND ELECTRON MICROGRAPHS OF FUNGAL JRNL TITL 2 VOLVATOXIN A2 JRNL REF J.MOL.BIOL. V. 343 477 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15451675 JRNL DOI 10.1016/J.JMB.2004.08.045 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 82.7 REMARK 3 NUMBER OF REFLECTIONS : 136219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.229 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6898 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.003 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 8 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.42 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.48 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 60.40 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 11763 REMARK 3 BIN R VALUE (WORKING SET) : 0.3420 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 617 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6148 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 52 REMARK 3 SOLVENT ATOMS : 756 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : -6.88000 REMARK 3 B33 (A**2) : 6.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 5.41000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.19 REMARK 3 ESD FROM SIGMAA (A) : 0.19 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.21 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.20 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 1.300 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.00 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : ANISOTROPIC REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.270 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.260 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 4.180 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 5.830 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : CNS BULK SOLVENT MODEL USED REMARK 3 KSOL : 0.39 REMARK 3 BSOL : 68.74 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ACY.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-JUN-03. REMARK 100 THE DEPOSITION ID IS D_1000019468. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NOV-01 REMARK 200 TEMPERATURE (KELVIN) : 133 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL38B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9236 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : ADSC REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 146871 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 29.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 85.4 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.03600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 26.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.25800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1IW3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, PEG 4000, ACETATE REMARK 280 BUFFER, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.99150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.73900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.99150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.73900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 143 REMARK 465 ASP A 144 REMARK 465 ASN A 145 REMARK 465 ASN A 199 REMARK 465 ALA B 1001 REMARK 465 SER B 1002 REMARK 465 ASP B 1003 REMARK 465 ASP B 1004 REMARK 465 ASN B 1199 REMARK 465 ALA C 2001 REMARK 465 SER C 2002 REMARK 465 ASP C 2003 REMARK 465 ASP C 2004 REMARK 465 ASN C 2199 REMARK 465 ALA D 3001 REMARK 465 SER D 3002 REMARK 465 ASP D 3003 REMARK 465 ASP D 3004 REMARK 465 GLY D 3143 REMARK 465 ASP D 3144 REMARK 465 ASN D 3145 REMARK 465 ASN D 3199 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 5146 O HOH C 5378 1.96 REMARK 500 O HOH B 5456 O HOH B 5629 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 5232 O HOH B 5360 4546 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 52 30.54 -97.75 REMARK 500 THR A 54 59.87 -99.79 REMARK 500 GLU A 56 1.43 -165.01 REMARK 500 ASP A 61 -75.26 -97.43 REMARK 500 ASP B1061 -69.41 -97.28 REMARK 500 ALA B1146 72.94 -155.27 REMARK 500 ASP C2061 -69.37 -97.61 REMARK 500 ALA C2146 70.54 -153.71 REMARK 500 THR D3054 51.86 -110.66 REMARK 500 GLU D3056 -15.50 -147.38 REMARK 500 ASP D3061 -69.17 -100.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY D 4001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 4002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 4003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 4004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 4005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY C 4006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 4007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY B 4008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY D 4009 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY D 4010 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 4011 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY A 4012 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACY D 4013 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1PP6 RELATED DB: PDB REMARK 900 VOLVATOXIN A2 (STRIP CRYSTAL FORM) REMARK 900 RELATED ID: 1VCY RELATED DB: PDB REMARK 900 VOLVATOXIN A2 ISOFORM REMARK 900 RELATED ID: 1VGF RELATED DB: PDB REMARK 900 VOLVATOXIN A2 (DIAMOND CRYSTAL FORM) DBREF 1PP0 A 1 199 UNP Q6USC4 Q6USC4_9AGAR 19 217 DBREF 1PP0 B 1001 1199 UNP Q6USC4 Q6USC4_9AGAR 19 217 DBREF 1PP0 C 2001 2199 UNP Q6USC4 Q6USC4_9AGAR 19 217 DBREF 1PP0 D 3001 3199 UNP Q6USC4 Q6USC4_9AGAR 19 217 SEQRES 1 A 199 ALA SER ASP ASP ASN VAL PHE GLN PRO VAL ASP GLN LEU SEQRES 2 A 199 PRO GLU ASP LEU ILE PRO SER SER ILE GLN VAL LEU LYS SEQRES 3 A 199 PHE SER GLY LYS TYR LEU LYS LEU GLU GLN ASP LYS ALA SEQRES 4 A 199 TYR PHE ASP TRP PRO GLY PHE LYS THR ALA ILE ASP ASN SEQRES 5 A 199 TYR THR GLY GLU ASP LEU SER PHE ASP LYS TYR ASP GLN SEQRES 6 A 199 SER THR ILE ASN GLN GLN SER GLN GLU VAL GLY ALA MET SEQRES 7 A 199 VAL ASP LYS ILE ALA LYS PHE LEU HIS ASP ALA PHE ALA SEQRES 8 A 199 ALA VAL VAL ASP LEU SER LYS LEU ALA ALA ILE ILE LEU SEQRES 9 A 199 ASN THR PHE THR ASN LEU GLU GLU GLU SER SER SER GLY SEQRES 10 A 199 PHE LEU GLN PHE ASN THR ASN ASN VAL LYS LYS ASN SER SEQRES 11 A 199 SER TRP GLU TYR ARG VAL LEU PHE SER VAL PRO PHE GLY SEQRES 12 A 199 ASP ASN ALA PRO SER TYR PHE TYR SER LEU VAL THR THR SEQRES 13 A 199 ILE LEU ILE THR ALA ASP ILE GLU GLU LYS THR GLY TRP SEQRES 14 A 199 TRP GLY LEU THR SER SER THR LYS LYS ASN PHE ALA VAL SEQRES 15 A 199 GLN ILE ASP ALA LEU GLU LEU VAL VAL LYS LYS GLY PHE SEQRES 16 A 199 LYS ALA PRO ASN SEQRES 1 B 199 ALA SER ASP ASP ASN VAL PHE GLN PRO VAL ASP GLN LEU SEQRES 2 B 199 PRO GLU ASP LEU ILE PRO SER SER ILE GLN VAL LEU LYS SEQRES 3 B 199 PHE SER GLY LYS TYR LEU LYS LEU GLU GLN ASP LYS ALA SEQRES 4 B 199 TYR PHE ASP TRP PRO GLY PHE LYS THR ALA ILE ASP ASN SEQRES 5 B 199 TYR THR GLY GLU ASP LEU SER PHE ASP LYS TYR ASP GLN SEQRES 6 B 199 SER THR ILE ASN GLN GLN SER GLN GLU VAL GLY ALA MET SEQRES 7 B 199 VAL ASP LYS ILE ALA LYS PHE LEU HIS ASP ALA PHE ALA SEQRES 8 B 199 ALA VAL VAL ASP LEU SER LYS LEU ALA ALA ILE ILE LEU SEQRES 9 B 199 ASN THR PHE THR ASN LEU GLU GLU GLU SER SER SER GLY SEQRES 10 B 199 PHE LEU GLN PHE ASN THR ASN ASN VAL LYS LYS ASN SER SEQRES 11 B 199 SER TRP GLU TYR ARG VAL LEU PHE SER VAL PRO PHE GLY SEQRES 12 B 199 ASP ASN ALA PRO SER TYR PHE TYR SER LEU VAL THR THR SEQRES 13 B 199 ILE LEU ILE THR ALA ASP ILE GLU GLU LYS THR GLY TRP SEQRES 14 B 199 TRP GLY LEU THR SER SER THR LYS LYS ASN PHE ALA VAL SEQRES 15 B 199 GLN ILE ASP ALA LEU GLU LEU VAL VAL LYS LYS GLY PHE SEQRES 16 B 199 LYS ALA PRO ASN SEQRES 1 C 199 ALA SER ASP ASP ASN VAL PHE GLN PRO VAL ASP GLN LEU SEQRES 2 C 199 PRO GLU ASP LEU ILE PRO SER SER ILE GLN VAL LEU LYS SEQRES 3 C 199 PHE SER GLY LYS TYR LEU LYS LEU GLU GLN ASP LYS ALA SEQRES 4 C 199 TYR PHE ASP TRP PRO GLY PHE LYS THR ALA ILE ASP ASN SEQRES 5 C 199 TYR THR GLY GLU ASP LEU SER PHE ASP LYS TYR ASP GLN SEQRES 6 C 199 SER THR ILE ASN GLN GLN SER GLN GLU VAL GLY ALA MET SEQRES 7 C 199 VAL ASP LYS ILE ALA LYS PHE LEU HIS ASP ALA PHE ALA SEQRES 8 C 199 ALA VAL VAL ASP LEU SER LYS LEU ALA ALA ILE ILE LEU SEQRES 9 C 199 ASN THR PHE THR ASN LEU GLU GLU GLU SER SER SER GLY SEQRES 10 C 199 PHE LEU GLN PHE ASN THR ASN ASN VAL LYS LYS ASN SER SEQRES 11 C 199 SER TRP GLU TYR ARG VAL LEU PHE SER VAL PRO PHE GLY SEQRES 12 C 199 ASP ASN ALA PRO SER TYR PHE TYR SER LEU VAL THR THR SEQRES 13 C 199 ILE LEU ILE THR ALA ASP ILE GLU GLU LYS THR GLY TRP SEQRES 14 C 199 TRP GLY LEU THR SER SER THR LYS LYS ASN PHE ALA VAL SEQRES 15 C 199 GLN ILE ASP ALA LEU GLU LEU VAL VAL LYS LYS GLY PHE SEQRES 16 C 199 LYS ALA PRO ASN SEQRES 1 D 199 ALA SER ASP ASP ASN VAL PHE GLN PRO VAL ASP GLN LEU SEQRES 2 D 199 PRO GLU ASP LEU ILE PRO SER SER ILE GLN VAL LEU LYS SEQRES 3 D 199 PHE SER GLY LYS TYR LEU LYS LEU GLU GLN ASP LYS ALA SEQRES 4 D 199 TYR PHE ASP TRP PRO GLY PHE LYS THR ALA ILE ASP ASN SEQRES 5 D 199 TYR THR GLY GLU ASP LEU SER PHE ASP LYS TYR ASP GLN SEQRES 6 D 199 SER THR ILE ASN GLN GLN SER GLN GLU VAL GLY ALA MET SEQRES 7 D 199 VAL ASP LYS ILE ALA LYS PHE LEU HIS ASP ALA PHE ALA SEQRES 8 D 199 ALA VAL VAL ASP LEU SER LYS LEU ALA ALA ILE ILE LEU SEQRES 9 D 199 ASN THR PHE THR ASN LEU GLU GLU GLU SER SER SER GLY SEQRES 10 D 199 PHE LEU GLN PHE ASN THR ASN ASN VAL LYS LYS ASN SER SEQRES 11 D 199 SER TRP GLU TYR ARG VAL LEU PHE SER VAL PRO PHE GLY SEQRES 12 D 199 ASP ASN ALA PRO SER TYR PHE TYR SER LEU VAL THR THR SEQRES 13 D 199 ILE LEU ILE THR ALA ASP ILE GLU GLU LYS THR GLY TRP SEQRES 14 D 199 TRP GLY LEU THR SER SER THR LYS LYS ASN PHE ALA VAL SEQRES 15 D 199 GLN ILE ASP ALA LEU GLU LEU VAL VAL LYS LYS GLY PHE SEQRES 16 D 199 LYS ALA PRO ASN HET ACY A4003 4 HET ACY A4004 4 HET ACY A4005 4 HET ACY A4011 4 HET ACY A4012 4 HET ACY B4002 4 HET ACY B4007 4 HET ACY B4008 4 HET ACY C4006 4 HET ACY D4001 4 HET ACY D4009 4 HET ACY D4010 4 HET ACY D4013 4 HETNAM ACY ACETIC ACID FORMUL 5 ACY 13(C2 H4 O2) FORMUL 18 HOH *756(H2 O) HELIX 1 1 PRO A 14 ASP A 16 5 3 HELIX 2 2 LEU A 17 LYS A 30 1 14 HELIX 3 3 ASP A 42 ASN A 52 1 11 HELIX 4 4 VAL A 75 PHE A 90 1 16 HELIX 5 5 ASP A 95 THR A 108 1 14 HELIX 6 6 ASN A 109 SER A 114 1 6 HELIX 7 7 GLU A 165 TRP A 170 5 6 HELIX 8 8 PRO B 1014 ASP B 1016 5 3 HELIX 9 9 LEU B 1017 LYS B 1030 1 14 HELIX 10 10 ASP B 1042 ASN B 1052 1 11 HELIX 11 11 VAL B 1075 PHE B 1090 1 16 HELIX 12 12 ASP B 1095 THR B 1108 1 14 HELIX 13 13 ASN B 1109 SER B 1114 1 6 HELIX 14 14 GLU B 1165 TRP B 1170 5 6 HELIX 15 15 PRO C 2014 ASP C 2016 5 3 HELIX 16 16 LEU C 2017 LYS C 2030 1 14 HELIX 17 17 ASP C 2042 ASN C 2052 1 11 HELIX 18 18 VAL C 2075 PHE C 2090 1 16 HELIX 19 19 LEU C 2096 THR C 2108 1 13 HELIX 20 20 ASN C 2109 SER C 2114 1 6 HELIX 21 21 GLU C 2165 TRP C 2170 5 6 HELIX 22 22 LEU D 3017 LYS D 3030 1 14 HELIX 23 23 ASP D 3042 ASN D 3052 1 11 HELIX 24 24 VAL D 3075 PHE D 3090 1 16 HELIX 25 25 ASP D 3095 THR D 3108 1 14 HELIX 26 26 ASN D 3109 SER D 3114 1 6 HELIX 27 27 GLU D 3165 TRP D 3170 5 6 SHEET 1 A10 GLN A 8 ASP A 11 0 SHEET 2 A10 ASN A 129 PRO A 141 1 O ARG A 135 N GLN A 8 SHEET 3 A10 TYR A 149 ALA A 161 -1 O LEU A 153 N PHE A 138 SHEET 4 A10 LYS A 177 LYS A 192 -1 O VAL A 191 N PHE A 150 SHEET 5 A10 LEU A 58 GLU A 74 -1 N LYS A 62 O GLU A 188 SHEET 6 A10 LEU B1058 GLU B1074 -1 O TYR B1063 N THR A 67 SHEET 7 A10 LYS B1177 LYS B1192 -1 O GLU B1188 N LYS B1062 SHEET 8 A10 TYR B1149 ALA B1161 -1 N PHE B1150 O VAL B1191 SHEET 9 A10 ASN B1129 PRO B1141 -1 N PHE B1138 O LEU B1153 SHEET 10 A10 GLN B1008 ASP B1011 1 N VAL B1010 O LEU B1137 SHEET 1 B10 LEU A 119 ASN A 124 0 SHEET 2 B10 ASN A 129 PRO A 141 -1 O ASN A 129 N ASN A 124 SHEET 3 B10 TYR A 149 ALA A 161 -1 O LEU A 153 N PHE A 138 SHEET 4 B10 LYS A 177 LYS A 192 -1 O VAL A 191 N PHE A 150 SHEET 5 B10 LEU A 58 GLU A 74 -1 N LYS A 62 O GLU A 188 SHEET 6 B10 LEU B1058 GLU B1074 -1 O TYR B1063 N THR A 67 SHEET 7 B10 LYS B1177 LYS B1192 -1 O GLU B1188 N LYS B1062 SHEET 8 B10 TYR B1149 ALA B1161 -1 N PHE B1150 O VAL B1191 SHEET 9 B10 ASN B1129 PRO B1141 -1 N PHE B1138 O LEU B1153 SHEET 10 B10 LEU B1119 ASN B1124 -1 N ASN B1124 O ASN B1129 SHEET 1 C 2 LEU A 32 GLU A 35 0 SHEET 2 C 2 LYS A 38 PHE A 41 -1 O TYR A 40 N LYS A 33 SHEET 1 D 2 LEU B1032 GLU B1035 0 SHEET 2 D 2 LYS B1038 PHE B1041 -1 O TYR B1040 N LYS B1033 SHEET 1 E10 GLN C2008 ASP C2011 0 SHEET 2 E10 ASN C2129 PRO C2141 1 O LEU C2137 N VAL C2010 SHEET 3 E10 TYR C2149 ALA C2161 -1 O LEU C2153 N PHE C2138 SHEET 4 E10 LYS C2177 LYS C2192 -1 O VAL C2191 N PHE C2150 SHEET 5 E10 LEU C2058 GLU C2074 -1 N LYS C2062 O GLU C2188 SHEET 6 E10 LEU D3058 GLU D3074 -1 O TYR D3063 N THR C2067 SHEET 7 E10 LYS D3177 LYS D3192 -1 O GLU D3188 N LYS D3062 SHEET 8 E10 TYR D3149 ALA D3161 -1 N PHE D3150 O VAL D3191 SHEET 9 E10 ASN D3129 PRO D3141 -1 N PHE D3138 O LEU D3153 SHEET 10 E10 GLN D3008 ASP D3011 1 N GLN D3008 O LEU D3137 SHEET 1 F10 LEU C2119 ASN C2124 0 SHEET 2 F10 ASN C2129 PRO C2141 -1 O ASN C2129 N ASN C2124 SHEET 3 F10 TYR C2149 ALA C2161 -1 O LEU C2153 N PHE C2138 SHEET 4 F10 LYS C2177 LYS C2192 -1 O VAL C2191 N PHE C2150 SHEET 5 F10 LEU C2058 GLU C2074 -1 N LYS C2062 O GLU C2188 SHEET 6 F10 LEU D3058 GLU D3074 -1 O TYR D3063 N THR C2067 SHEET 7 F10 LYS D3177 LYS D3192 -1 O GLU D3188 N LYS D3062 SHEET 8 F10 TYR D3149 ALA D3161 -1 N PHE D3150 O VAL D3191 SHEET 9 F10 ASN D3129 PRO D3141 -1 N PHE D3138 O LEU D3153 SHEET 10 F10 LEU D3119 ASN D3124 -1 N ASN D3122 O SER D3131 SHEET 1 G 2 LEU C2032 GLU C2035 0 SHEET 2 G 2 LYS C2038 PHE C2041 -1 O TYR C2040 N LYS C2033 SHEET 1 H 2 LEU D3032 GLU D3035 0 SHEET 2 H 2 LYS D3038 PHE D3041 -1 O TYR D3040 N LYS D3033 SITE 1 AC1 4 ILE D3163 GLU D3164 GLU D3165 HOH D5049 SITE 1 AC2 4 LYS B1047 ASP B1051 PHE B1060 HOH B5660 SITE 1 AC3 3 LYS A 47 ASP A 51 PHE A 60 SITE 1 AC4 3 GLN A 8 HOH A5043 HOH A5321 SITE 1 AC5 6 TYR A 40 ASN A 122 SER A 131 LEU A 158 SITE 2 AC5 6 HOH A5069 HOH A5677 SITE 1 AC6 4 LYS C2047 ASP C2051 PHE C2060 HOH C5525 SITE 1 AC7 4 VAL B1093 VAL B1094 ASP B1095 ACY B4008 SITE 1 AC8 2 VAL B1010 ACY B4007 SITE 1 AC9 4 LYS D3047 ASP D3051 PHE D3060 HOH D5483 SITE 1 BC1 3 VAL D3010 GLN D3012 HOH D5206 SITE 1 BC2 6 VAL A 10 GLN A 12 PHE A 138 SER A 139 SITE 2 BC2 6 VAL A 140 HOH A5170 SITE 1 BC3 4 ILE A 163 GLU A 164 HOH A5100 HOH A5194 SITE 1 BC4 3 GLN D3008 LYS D3098 ILE D3102 CRYST1 153.983 57.478 114.629 90.00 119.39 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006494 0.000000 0.003657 0.00000 SCALE2 0.000000 0.017398 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010012 0.00000