data_1PT3 # _entry.id 1PT3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PT3 pdb_00001pt3 10.2210/pdb1pt3/pdb NDB PD0454 ? ? RCSB RCSB019551 ? ? WWPDB D_1000019551 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 7CEI 'The DNase domain of ColE7 in complex with Im7' unspecified PDB 1M08 'The Unbound DNase domain of ColE7' unspecified PDB 1MZ8 'The Nuclease Domain of Cole7/Im7 in Complex with a Phosphate Ion and Different Divalent Metal Ions' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PT3 _pdbx_database_status.recvd_initial_deposition_date 2003-06-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hsia, K.C.' 1 'Chak, K.F.' 2 'Cheng, Y.S.' 3 'Ku, W.Y.' 4 'Yuan, H.S.' 5 # _citation.id primary _citation.title 'DNA binding and degradation by the HNH protein ColE7.' _citation.journal_abbrev STRUCTURE _citation.journal_volume 12 _citation.page_first 205 _citation.page_last 214 _citation.year 2004 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14962381 _citation.pdbx_database_id_DOI '10.1016/S0969-2126(04)00006-1' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hsia, K.C.' 1 ? primary 'Chak, K.F.' 2 ? primary 'Liang, P.H.' 3 ? primary 'Cheng, Y.S.' 4 ? primary 'Ku, W.Y.' 5 ? primary 'Yuan, H.S.' 6 ? # _cell.entry_id 1PT3 _cell.length_a 59.430 _cell.length_b 46.470 _cell.length_c 78.450 _cell.angle_alpha 90.00 _cell.angle_beta 90.39 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PT3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-GCGATCGC-3'" 2427.605 6 ? ? ? ? 2 polymer man 'Colicin E7' 14661.624 2 3.1.-.- ? 'residues 449-576' ? 3 water nat water 18.015 232 ? ? ? ? # _entity_name_sys.entity_id 2 _entity_name_sys.name 3.1.-.- # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DA)(DT)(DC)(DG)(DC)' GCGATCGC C,D,G,H,E,F ? 2 'polypeptide(L)' no no ;KPGKATGKGKPVNNKWLNNAGKDLGSPVPDRIANKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPK TRTQDVSGKRTSFELHHEKPISQNGGVYDMDNISVVTPKRHIDIHRGK ; ;KPGKATGKGKPVNNKWLNNAGKDLGSPVPDRIANKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPK TRTQDVSGKRTSFELHHEKPISQNGGVYDMDNISVVTPKRHIDIHRGK ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DT n 1 6 DC n 1 7 DG n 1 8 DC n 2 1 LYS n 2 2 PRO n 2 3 GLY n 2 4 LYS n 2 5 ALA n 2 6 THR n 2 7 GLY n 2 8 LYS n 2 9 GLY n 2 10 LYS n 2 11 PRO n 2 12 VAL n 2 13 ASN n 2 14 ASN n 2 15 LYS n 2 16 TRP n 2 17 LEU n 2 18 ASN n 2 19 ASN n 2 20 ALA n 2 21 GLY n 2 22 LYS n 2 23 ASP n 2 24 LEU n 2 25 GLY n 2 26 SER n 2 27 PRO n 2 28 VAL n 2 29 PRO n 2 30 ASP n 2 31 ARG n 2 32 ILE n 2 33 ALA n 2 34 ASN n 2 35 LYS n 2 36 LEU n 2 37 ARG n 2 38 ASP n 2 39 LYS n 2 40 GLU n 2 41 PHE n 2 42 LYS n 2 43 SER n 2 44 PHE n 2 45 ASP n 2 46 ASP n 2 47 PHE n 2 48 ARG n 2 49 LYS n 2 50 LYS n 2 51 PHE n 2 52 TRP n 2 53 GLU n 2 54 GLU n 2 55 VAL n 2 56 SER n 2 57 LYS n 2 58 ASP n 2 59 PRO n 2 60 GLU n 2 61 LEU n 2 62 SER n 2 63 LYS n 2 64 GLN n 2 65 PHE n 2 66 SER n 2 67 ARG n 2 68 ASN n 2 69 ASN n 2 70 ASN n 2 71 ASP n 2 72 ARG n 2 73 MET n 2 74 LYS n 2 75 VAL n 2 76 GLY n 2 77 LYS n 2 78 ALA n 2 79 PRO n 2 80 LYS n 2 81 THR n 2 82 ARG n 2 83 THR n 2 84 GLN n 2 85 ASP n 2 86 VAL n 2 87 SER n 2 88 GLY n 2 89 LYS n 2 90 ARG n 2 91 THR n 2 92 SER n 2 93 PHE n 2 94 GLU n 2 95 LEU n 2 96 HIS n 2 97 HIS n 2 98 GLU n 2 99 LYS n 2 100 PRO n 2 101 ILE n 2 102 SER n 2 103 GLN n 2 104 ASN n 2 105 GLY n 2 106 GLY n 2 107 VAL n 2 108 TYR n 2 109 ASP n 2 110 MET n 2 111 ASP n 2 112 ASN n 2 113 ILE n 2 114 SER n 2 115 VAL n 2 116 VAL n 2 117 THR n 2 118 PRO n 2 119 LYS n 2 120 ARG n 2 121 HIS n 2 122 ILE n 2 123 ASP n 2 124 ILE n 2 125 HIS n 2 126 ARG n 2 127 GLY n 2 128 LYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene COLE7 _entity_src_gen.gene_src_species 'Escherichia coli' _entity_src_gen.gene_src_strain W3110 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli str. K12 substr.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 316407 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain M15 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PQE70 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'This sequence occurs naturally in E. coli.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CEA7_ECOLI Q47112 2 ;KPGKATGKGKPVNNKWLNNAGKDLGSPVPDRIANKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPK TRTQDVSGKRTSFELHHEKPISQNGGVYDMDNISVVTPKRHIDIHRGK ; 449 ? 2 PDB 1PT3 1PT3 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1PT3 A 1 ? 128 ? Q47112 449 ? 576 ? 449 576 2 1 1PT3 B 1 ? 128 ? Q47112 449 ? 576 ? 449 576 3 2 1PT3 C 1 ? 8 ? 1PT3 1 ? 8 ? 1 8 4 2 1PT3 D 1 ? 8 ? 1PT3 9 ? 16 ? 9 16 5 2 1PT3 G 1 ? 8 ? 1PT3 1 ? 8 ? 1 8 6 2 1PT3 H 1 ? 8 ? 1PT3 9 ? 16 ? 9 16 7 2 1PT3 E 1 ? 8 ? 1PT3 1 ? 8 ? 1 8 8 2 1PT3 F 1 ? 8 ? 1PT3 9 ? 16 ? 9 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1PT3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_percent_sol 49.38 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_details ;2.5 mM EDTA, 12.5 mM Tris-HCl (pH 7.5), 0.1 M Ammonium Formate, and 10 % PEG 3350, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K, pH 7.50 ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 EDTA ? ? ? 1 2 1 Tris-HCl ? ? ? 1 3 1 'Ammonium Formate' ? ? ? 1 4 1 'PEG 3350' ? ? ? 1 5 1 H2O ? ? ? 1 6 2 'PEG 3350' ? ? ? 1 7 2 'Ammonium Formate' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 120.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2003-01-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL12B2' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL12B2 _diffrn_source.pdbx_wavelength 1.0 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1PT3 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40.000 _reflns.d_resolution_high 2.500 _reflns.number_obs 15076 _reflns.number_all ? _reflns.percent_possible_obs 96.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.045 _reflns.pdbx_netI_over_sigmaI 36.4000 _reflns.B_iso_Wilson_estimate 32.20 _reflns.pdbx_redundancy 4.070 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.49 _reflns_shell.d_res_low 2.58 _reflns_shell.percent_possible_all 84.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.241 _reflns_shell.meanI_over_sigI_obs 7.800 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1PT3 _refine.ls_number_reflns_obs 14389 _refine.ls_number_reflns_all 14389 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 567313.87000 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF 567313.87000 _refine.ls_d_res_low 27.73 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 95.3 _refine.ls_R_factor_obs 0.216 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.216 _refine.ls_R_factor_R_free 0.289 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.100 _refine.ls_number_reflns_R_free 1455 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 44.90 _refine.aniso_B[1][1] 5.81000 _refine.aniso_B[2][2] 9.19000 _refine.aniso_B[3][3] -15.00000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -0.96000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.29 _refine.solvent_model_param_bsol 40.96 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 7CEI _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1PT3 _refine_analyze.Luzzati_coordinate_error_obs 0.34 _refine_analyze.Luzzati_sigma_a_obs 0.36 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.50 _refine_analyze.Luzzati_sigma_a_free 0.54 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2064 _refine_hist.pdbx_number_atoms_nucleic_acid 966 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 232 _refine_hist.number_atoms_total 3262 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 27.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.30 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.40 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 4.83 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.460 1.500 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.460 2.000 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.080 2.000 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 3.260 2.500 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.66 _refine_ls_shell.number_reflns_R_work 2004 _refine_ls_shell.R_factor_R_work 0.301 _refine_ls_shell.percent_reflns_obs 88.10 _refine_ls_shell.R_factor_R_free 0.399 _refine_ls_shell.R_factor_R_free_error 0.029 _refine_ls_shell.percent_reflns_R_free 8.60 _refine_ls_shell.number_reflns_R_free 188 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.PARAM ION.TOP 'X-RAY DIFFRACTION' 5 ? ? 'X-RAY DIFFRACTION' # _struct.entry_id 1PT3 _struct.title 'Crystal structures of nuclease-ColE7 complexed with octamer DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PT3 _struct_keywords.pdbx_keywords Hydrolase/DNA _struct_keywords.text 'HNH MOTIF, ENDONUCLEASE, COLICIN, PROTEIN-DNA COMPLEX, Hydrolase-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? # _struct_biol.id 1 _struct_biol.details 'THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S).' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS G 15 ? ALA G 20 ? LYS A 463 ALA A 468 5 ? 6 HELX_P HELX_P2 2 PRO G 29 ? ARG G 37 ? PRO A 477 ARG A 485 1 ? 9 HELX_P HELX_P3 3 SER G 43 ? ASP G 58 ? SER A 491 ASP A 506 1 ? 16 HELX_P HELX_P4 4 ASP G 58 ? LYS G 63 ? ASP A 506 LYS A 511 1 ? 6 HELX_P HELX_P5 5 SER G 66 ? LYS G 74 ? SER A 514 LYS A 522 1 ? 9 HELX_P HELX_P6 6 ARG G 82 ? VAL G 86 ? ARG A 530 VAL A 534 5 ? 5 HELX_P HELX_P7 7 ASP G 109 ? ASP G 111 ? ASP A 557 ASP A 559 5 ? 3 HELX_P HELX_P8 8 THR G 117 ? GLY G 127 ? THR A 565 GLY A 575 1 ? 11 HELX_P HELX_P9 9 LYS H 15 ? ASN H 19 ? LYS B 463 ASN B 467 5 ? 5 HELX_P HELX_P10 10 PRO H 29 ? ARG H 37 ? PRO B 477 ARG B 485 1 ? 9 HELX_P HELX_P11 11 SER H 43 ? LYS H 57 ? SER B 491 LYS B 505 1 ? 15 HELX_P HELX_P12 12 ASP H 58 ? LYS H 63 ? ASP B 506 LYS B 511 1 ? 6 HELX_P HELX_P13 13 SER H 66 ? VAL H 75 ? SER B 514 VAL B 523 1 ? 10 HELX_P HELX_P14 14 ARG H 82 ? VAL H 86 ? ARG B 530 VAL B 534 5 ? 5 HELX_P HELX_P15 15 PRO H 100 ? ASN H 104 ? PRO B 548 ASN B 552 5 ? 5 HELX_P HELX_P16 16 ASP H 109 ? ASP H 111 ? ASP B 557 ASP B 559 5 ? 3 HELX_P HELX_P17 17 THR H 117 ? HIS H 125 ? THR B 565 HIS B 573 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 1 D DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 7 N1 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 7 O6 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 7 N2 ? ? C DC 2 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 3 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 3 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 3 D DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 5 N3 ? ? C DA 4 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 5 O4 ? ? C DA 4 D DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 5 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 6 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 7 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? C DC 8 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? C DC 8 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? C DC 8 D DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 8 N3 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 8 O2 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 8 N4 ? ? G DG 1 H DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 7 O6 ? ? G DC 2 H DG 15 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog27 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 6 N3 ? ? G DG 3 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 6 O2 ? ? G DG 3 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 6 N4 ? ? G DG 3 H DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 5 N3 ? ? G DA 4 H DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 5 O4 ? ? G DA 4 H DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 4 N1 ? ? G DT 5 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 4 N6 ? ? G DT 5 H DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 3 N1 ? ? G DC 6 H DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 3 O6 ? ? G DC 6 H DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 3 N2 ? ? G DC 6 H DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 2 N3 ? ? G DG 7 H DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 2 O2 ? ? G DG 7 H DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 2 N4 ? ? G DG 7 H DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 1 N1 ? ? G DC 8 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 1 O6 ? ? G DC 8 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 1 N2 ? ? G DC 8 H DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 8 N3 ? ? E DG 1 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 8 O2 ? ? E DG 1 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 8 N4 ? ? E DG 1 F DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 7 N1 ? ? E DC 2 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 7 O6 ? ? E DC 2 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 7 N2 ? ? E DC 2 F DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E DG 3 N1 ? ? ? 1_555 F DC 6 N3 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E DG 3 N2 ? ? ? 1_555 F DC 6 O2 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E DG 3 O6 ? ? ? 1_555 F DC 6 N4 ? ? E DG 3 F DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 5 N3 ? ? E DA 4 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 5 O4 ? ? E DA 4 F DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DT 5 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 5 F DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DT 5 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 5 F DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DC 6 N3 ? ? ? 1_555 F DG 3 N1 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DC 6 N4 ? ? ? 1_555 F DG 3 O6 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DC 6 O2 ? ? ? 1_555 F DG 3 N2 ? ? E DC 6 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 7 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 7 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 7 F DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DC 8 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DC 8 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DC 8 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 8 F DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY G 3 ? LYS G 4 ? GLY A 451 LYS A 452 A 2 GLU G 40 ? PHE G 41 ? GLU A 488 PHE A 489 B 1 SER G 26 ? PRO G 27 ? SER A 474 PRO A 475 B 2 ILE G 113 ? VAL G 116 ? ILE A 561 VAL A 564 B 3 GLU G 94 ? HIS G 97 ? GLU A 542 HIS A 545 C 1 GLY H 3 ? LYS H 4 ? GLY B 451 LYS B 452 C 2 GLU H 40 ? PHE H 41 ? GLU B 488 PHE B 489 D 1 SER H 26 ? PRO H 27 ? SER B 474 PRO B 475 D 2 ILE H 113 ? VAL H 116 ? ILE B 561 VAL B 564 D 3 GLU H 94 ? HIS H 97 ? GLU B 542 HIS B 545 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY G 3 ? N GLY A 451 O PHE G 41 ? O PHE A 489 B 1 2 N SER G 26 ? N SER A 474 O VAL G 115 ? O VAL A 563 B 2 3 O VAL G 116 ? O VAL A 564 N GLU G 94 ? N GLU A 542 C 1 2 N GLY H 3 ? N GLY B 451 O PHE H 41 ? O PHE B 489 D 1 2 N SER H 26 ? N SER B 474 O VAL H 115 ? O VAL B 563 D 2 3 O SER H 114 ? O SER B 562 N HIS H 96 ? N HIS B 544 # _database_PDB_matrix.entry_id 1PT3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PT3 _atom_sites.fract_transf_matrix[1][1] 0.016827 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000115 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021519 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012747 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G C . n A 1 2 DC 2 2 2 DC C C . n A 1 3 DG 3 3 3 DG G C . n A 1 4 DA 4 4 4 DA A C . n A 1 5 DT 5 5 5 DT T C . n A 1 6 DC 6 6 6 DC C C . n A 1 7 DG 7 7 7 DG G C . n A 1 8 DC 8 8 8 DC C C . n B 1 1 DG 1 9 9 DG G D . n B 1 2 DC 2 10 10 DC C D . n B 1 3 DG 3 11 11 DG G D . n B 1 4 DA 4 12 12 DA A D . n B 1 5 DT 5 13 13 DT T D . n B 1 6 DC 6 14 14 DC C D . n B 1 7 DG 7 15 15 DG G D . n B 1 8 DC 8 16 16 DC C D . n C 1 1 DG 1 1 1 DG G G . n C 1 2 DC 2 2 2 DC C G . n C 1 3 DG 3 3 3 DG G G . n C 1 4 DA 4 4 4 DA A G . n C 1 5 DT 5 5 5 DT T G . n C 1 6 DC 6 6 6 DC C G . n C 1 7 DG 7 7 7 DG G G . n C 1 8 DC 8 8 8 DC C G . n D 1 1 DG 1 9 9 DG G H . n D 1 2 DC 2 10 10 DC C H . n D 1 3 DG 3 11 11 DG G H . n D 1 4 DA 4 12 12 DA A H . n D 1 5 DT 5 13 13 DT T H . n D 1 6 DC 6 14 14 DC C H . n D 1 7 DG 7 15 15 DG G H . n D 1 8 DC 8 16 16 DC C H . n E 1 1 DG 1 1 1 DG G E . n E 1 2 DC 2 2 2 DC C E . n E 1 3 DG 3 3 3 DG G E . n E 1 4 DA 4 4 4 DA A E . n E 1 5 DT 5 5 5 DT T E . n E 1 6 DC 6 6 6 DC C E . n E 1 7 DG 7 7 7 DG G E . n E 1 8 DC 8 8 8 DC C E . n F 1 1 DG 1 9 9 DG G F . n F 1 2 DC 2 10 10 DC C F . n F 1 3 DG 3 11 11 DG G F . n F 1 4 DA 4 12 12 DA A F . n F 1 5 DT 5 13 13 DT T F . n F 1 6 DC 6 14 14 DC C F . n F 1 7 DG 7 15 15 DG G F . n F 1 8 DC 8 16 16 DC C F . n G 2 1 LYS 1 449 449 LYS LYS A . n G 2 2 PRO 2 450 450 PRO PRO A . n G 2 3 GLY 3 451 451 GLY GLY A . n G 2 4 LYS 4 452 452 LYS LYS A . n G 2 5 ALA 5 453 453 ALA ALA A . n G 2 6 THR 6 454 454 THR THR A . n G 2 7 GLY 7 455 455 GLY GLY A . n G 2 8 LYS 8 456 456 LYS LYS A . n G 2 9 GLY 9 457 457 GLY GLY A . n G 2 10 LYS 10 458 458 LYS LYS A . n G 2 11 PRO 11 459 459 PRO PRO A . n G 2 12 VAL 12 460 460 VAL VAL A . n G 2 13 ASN 13 461 461 ASN ASN A . n G 2 14 ASN 14 462 462 ASN ASN A . n G 2 15 LYS 15 463 463 LYS LYS A . n G 2 16 TRP 16 464 464 TRP TRP A . n G 2 17 LEU 17 465 465 LEU LEU A . n G 2 18 ASN 18 466 466 ASN ASN A . n G 2 19 ASN 19 467 467 ASN ASN A . n G 2 20 ALA 20 468 468 ALA ALA A . n G 2 21 GLY 21 469 469 GLY GLY A . n G 2 22 LYS 22 470 470 LYS LYS A . n G 2 23 ASP 23 471 471 ASP ASP A . n G 2 24 LEU 24 472 472 LEU LEU A . n G 2 25 GLY 25 473 473 GLY GLY A . n G 2 26 SER 26 474 474 SER SER A . n G 2 27 PRO 27 475 475 PRO PRO A . n G 2 28 VAL 28 476 476 VAL VAL A . n G 2 29 PRO 29 477 477 PRO PRO A . n G 2 30 ASP 30 478 478 ASP ASP A . n G 2 31 ARG 31 479 479 ARG ARG A . n G 2 32 ILE 32 480 480 ILE ILE A . n G 2 33 ALA 33 481 481 ALA ALA A . n G 2 34 ASN 34 482 482 ASN ASN A . n G 2 35 LYS 35 483 483 LYS LYS A . n G 2 36 LEU 36 484 484 LEU LEU A . n G 2 37 ARG 37 485 485 ARG ARG A . n G 2 38 ASP 38 486 486 ASP ASP A . n G 2 39 LYS 39 487 487 LYS LYS A . n G 2 40 GLU 40 488 488 GLU GLU A . n G 2 41 PHE 41 489 489 PHE PHE A . n G 2 42 LYS 42 490 490 LYS LYS A . n G 2 43 SER 43 491 491 SER SER A . n G 2 44 PHE 44 492 492 PHE PHE A . n G 2 45 ASP 45 493 493 ASP ASP A . n G 2 46 ASP 46 494 494 ASP ASP A . n G 2 47 PHE 47 495 495 PHE PHE A . n G 2 48 ARG 48 496 496 ARG ARG A . n G 2 49 LYS 49 497 497 LYS LYS A . n G 2 50 LYS 50 498 498 LYS LYS A . n G 2 51 PHE 51 499 499 PHE PHE A . n G 2 52 TRP 52 500 500 TRP TRP A . n G 2 53 GLU 53 501 501 GLU GLU A . n G 2 54 GLU 54 502 502 GLU GLU A . n G 2 55 VAL 55 503 503 VAL VAL A . n G 2 56 SER 56 504 504 SER SER A . n G 2 57 LYS 57 505 505 LYS LYS A . n G 2 58 ASP 58 506 506 ASP ASP A . n G 2 59 PRO 59 507 507 PRO PRO A . n G 2 60 GLU 60 508 508 GLU GLU A . n G 2 61 LEU 61 509 509 LEU LEU A . n G 2 62 SER 62 510 510 SER SER A . n G 2 63 LYS 63 511 511 LYS LYS A . n G 2 64 GLN 64 512 512 GLN GLN A . n G 2 65 PHE 65 513 513 PHE PHE A . n G 2 66 SER 66 514 514 SER SER A . n G 2 67 ARG 67 515 515 ARG ARG A . n G 2 68 ASN 68 516 516 ASN ASN A . n G 2 69 ASN 69 517 517 ASN ASN A . n G 2 70 ASN 70 518 518 ASN ASN A . n G 2 71 ASP 71 519 519 ASP ASP A . n G 2 72 ARG 72 520 520 ARG ARG A . n G 2 73 MET 73 521 521 MET MET A . n G 2 74 LYS 74 522 522 LYS LYS A . n G 2 75 VAL 75 523 523 VAL VAL A . n G 2 76 GLY 76 524 524 GLY GLY A . n G 2 77 LYS 77 525 525 LYS LYS A . n G 2 78 ALA 78 526 526 ALA ALA A . n G 2 79 PRO 79 527 527 PRO PRO A . n G 2 80 LYS 80 528 528 LYS LYS A . n G 2 81 THR 81 529 529 THR THR A . n G 2 82 ARG 82 530 530 ARG ARG A . n G 2 83 THR 83 531 531 THR THR A . n G 2 84 GLN 84 532 532 GLN GLN A . n G 2 85 ASP 85 533 533 ASP ASP A . n G 2 86 VAL 86 534 534 VAL VAL A . n G 2 87 SER 87 535 535 SER SER A . n G 2 88 GLY 88 536 536 GLY GLY A . n G 2 89 LYS 89 537 537 LYS LYS A . n G 2 90 ARG 90 538 538 ARG ARG A . n G 2 91 THR 91 539 539 THR THR A . n G 2 92 SER 92 540 540 SER SER A . n G 2 93 PHE 93 541 541 PHE PHE A . n G 2 94 GLU 94 542 542 GLU GLU A . n G 2 95 LEU 95 543 543 LEU LEU A . n G 2 96 HIS 96 544 544 HIS HIS A . n G 2 97 HIS 97 545 545 HIS HIS A . n G 2 98 GLU 98 546 546 GLU GLU A . n G 2 99 LYS 99 547 547 LYS LYS A . n G 2 100 PRO 100 548 548 PRO PRO A . n G 2 101 ILE 101 549 549 ILE ILE A . n G 2 102 SER 102 550 550 SER SER A . n G 2 103 GLN 103 551 551 GLN GLN A . n G 2 104 ASN 104 552 552 ASN ASN A . n G 2 105 GLY 105 553 553 GLY GLY A . n G 2 106 GLY 106 554 554 GLY GLY A . n G 2 107 VAL 107 555 555 VAL VAL A . n G 2 108 TYR 108 556 556 TYR TYR A . n G 2 109 ASP 109 557 557 ASP ASP A . n G 2 110 MET 110 558 558 MET MET A . n G 2 111 ASP 111 559 559 ASP ASP A . n G 2 112 ASN 112 560 560 ASN ASN A . n G 2 113 ILE 113 561 561 ILE ILE A . n G 2 114 SER 114 562 562 SER SER A . n G 2 115 VAL 115 563 563 VAL VAL A . n G 2 116 VAL 116 564 564 VAL VAL A . n G 2 117 THR 117 565 565 THR THR A . n G 2 118 PRO 118 566 566 PRO PRO A . n G 2 119 LYS 119 567 567 LYS LYS A . n G 2 120 ARG 120 568 568 ARG ARG A . n G 2 121 HIS 121 569 569 HIS HIS A . n G 2 122 ILE 122 570 570 ILE ILE A . n G 2 123 ASP 123 571 571 ASP ASP A . n G 2 124 ILE 124 572 572 ILE ILE A . n G 2 125 HIS 125 573 573 HIS HIS A . n G 2 126 ARG 126 574 574 ARG ARG A . n G 2 127 GLY 127 575 575 GLY GLY A . n G 2 128 LYS 128 576 576 LYS LYS A . n H 2 1 LYS 1 449 449 LYS LYS B . n H 2 2 PRO 2 450 450 PRO PRO B . n H 2 3 GLY 3 451 451 GLY GLY B . n H 2 4 LYS 4 452 452 LYS LYS B . n H 2 5 ALA 5 453 453 ALA ALA B . n H 2 6 THR 6 454 454 THR THR B . n H 2 7 GLY 7 455 455 GLY GLY B . n H 2 8 LYS 8 456 456 LYS LYS B . n H 2 9 GLY 9 457 457 GLY GLY B . n H 2 10 LYS 10 458 458 LYS LYS B . n H 2 11 PRO 11 459 459 PRO PRO B . n H 2 12 VAL 12 460 460 VAL VAL B . n H 2 13 ASN 13 461 461 ASN ASN B . n H 2 14 ASN 14 462 462 ASN ASN B . n H 2 15 LYS 15 463 463 LYS LYS B . n H 2 16 TRP 16 464 464 TRP TRP B . n H 2 17 LEU 17 465 465 LEU LEU B . n H 2 18 ASN 18 466 466 ASN ASN B . n H 2 19 ASN 19 467 467 ASN ASN B . n H 2 20 ALA 20 468 468 ALA ALA B . n H 2 21 GLY 21 469 469 GLY GLY B . n H 2 22 LYS 22 470 470 LYS LYS B . n H 2 23 ASP 23 471 471 ASP ASP B . n H 2 24 LEU 24 472 472 LEU LEU B . n H 2 25 GLY 25 473 473 GLY GLY B . n H 2 26 SER 26 474 474 SER SER B . n H 2 27 PRO 27 475 475 PRO PRO B . n H 2 28 VAL 28 476 476 VAL VAL B . n H 2 29 PRO 29 477 477 PRO PRO B . n H 2 30 ASP 30 478 478 ASP ASP B . n H 2 31 ARG 31 479 479 ARG ARG B . n H 2 32 ILE 32 480 480 ILE ILE B . n H 2 33 ALA 33 481 481 ALA ALA B . n H 2 34 ASN 34 482 482 ASN ASN B . n H 2 35 LYS 35 483 483 LYS LYS B . n H 2 36 LEU 36 484 484 LEU LEU B . n H 2 37 ARG 37 485 485 ARG ARG B . n H 2 38 ASP 38 486 486 ASP ASP B . n H 2 39 LYS 39 487 487 LYS LYS B . n H 2 40 GLU 40 488 488 GLU GLU B . n H 2 41 PHE 41 489 489 PHE PHE B . n H 2 42 LYS 42 490 490 LYS LYS B . n H 2 43 SER 43 491 491 SER SER B . n H 2 44 PHE 44 492 492 PHE PHE B . n H 2 45 ASP 45 493 493 ASP ASP B . n H 2 46 ASP 46 494 494 ASP ASP B . n H 2 47 PHE 47 495 495 PHE PHE B . n H 2 48 ARG 48 496 496 ARG ARG B . n H 2 49 LYS 49 497 497 LYS LYS B . n H 2 50 LYS 50 498 498 LYS LYS B . n H 2 51 PHE 51 499 499 PHE PHE B . n H 2 52 TRP 52 500 500 TRP TRP B . n H 2 53 GLU 53 501 501 GLU GLU B . n H 2 54 GLU 54 502 502 GLU GLU B . n H 2 55 VAL 55 503 503 VAL VAL B . n H 2 56 SER 56 504 504 SER SER B . n H 2 57 LYS 57 505 505 LYS LYS B . n H 2 58 ASP 58 506 506 ASP ASP B . n H 2 59 PRO 59 507 507 PRO PRO B . n H 2 60 GLU 60 508 508 GLU GLU B . n H 2 61 LEU 61 509 509 LEU LEU B . n H 2 62 SER 62 510 510 SER SER B . n H 2 63 LYS 63 511 511 LYS LYS B . n H 2 64 GLN 64 512 512 GLN GLN B . n H 2 65 PHE 65 513 513 PHE PHE B . n H 2 66 SER 66 514 514 SER SER B . n H 2 67 ARG 67 515 515 ARG ARG B . n H 2 68 ASN 68 516 516 ASN ASN B . n H 2 69 ASN 69 517 517 ASN ASN B . n H 2 70 ASN 70 518 518 ASN ASN B . n H 2 71 ASP 71 519 519 ASP ASP B . n H 2 72 ARG 72 520 520 ARG ARG B . n H 2 73 MET 73 521 521 MET MET B . n H 2 74 LYS 74 522 522 LYS LYS B . n H 2 75 VAL 75 523 523 VAL VAL B . n H 2 76 GLY 76 524 524 GLY GLY B . n H 2 77 LYS 77 525 525 LYS LYS B . n H 2 78 ALA 78 526 526 ALA ALA B . n H 2 79 PRO 79 527 527 PRO PRO B . n H 2 80 LYS 80 528 528 LYS LYS B . n H 2 81 THR 81 529 529 THR THR B . n H 2 82 ARG 82 530 530 ARG ARG B . n H 2 83 THR 83 531 531 THR THR B . n H 2 84 GLN 84 532 532 GLN GLN B . n H 2 85 ASP 85 533 533 ASP ASP B . n H 2 86 VAL 86 534 534 VAL VAL B . n H 2 87 SER 87 535 535 SER SER B . n H 2 88 GLY 88 536 536 GLY GLY B . n H 2 89 LYS 89 537 537 LYS LYS B . n H 2 90 ARG 90 538 538 ARG ARG B . n H 2 91 THR 91 539 539 THR THR B . n H 2 92 SER 92 540 540 SER SER B . n H 2 93 PHE 93 541 541 PHE PHE B . n H 2 94 GLU 94 542 542 GLU GLU B . n H 2 95 LEU 95 543 543 LEU LEU B . n H 2 96 HIS 96 544 544 HIS HIS B . n H 2 97 HIS 97 545 545 HIS HIS B . n H 2 98 GLU 98 546 546 GLU GLU B . n H 2 99 LYS 99 547 547 LYS LYS B . n H 2 100 PRO 100 548 548 PRO PRO B . n H 2 101 ILE 101 549 549 ILE ILE B . n H 2 102 SER 102 550 550 SER SER B . n H 2 103 GLN 103 551 551 GLN GLN B . n H 2 104 ASN 104 552 552 ASN ASN B . n H 2 105 GLY 105 553 553 GLY GLY B . n H 2 106 GLY 106 554 554 GLY GLY B . n H 2 107 VAL 107 555 555 VAL VAL B . n H 2 108 TYR 108 556 556 TYR TYR B . n H 2 109 ASP 109 557 557 ASP ASP B . n H 2 110 MET 110 558 558 MET MET B . n H 2 111 ASP 111 559 559 ASP ASP B . n H 2 112 ASN 112 560 560 ASN ASN B . n H 2 113 ILE 113 561 561 ILE ILE B . n H 2 114 SER 114 562 562 SER SER B . n H 2 115 VAL 115 563 563 VAL VAL B . n H 2 116 VAL 116 564 564 VAL VAL B . n H 2 117 THR 117 565 565 THR THR B . n H 2 118 PRO 118 566 566 PRO PRO B . n H 2 119 LYS 119 567 567 LYS LYS B . n H 2 120 ARG 120 568 568 ARG ARG B . n H 2 121 HIS 121 569 569 HIS HIS B . n H 2 122 ILE 122 570 570 ILE ILE B . n H 2 123 ASP 123 571 571 ASP ASP B . n H 2 124 ILE 124 572 572 ILE ILE B . n H 2 125 HIS 125 573 573 HIS HIS B . n H 2 126 ARG 126 574 574 ARG ARG B . n H 2 127 GLY 127 575 575 GLY GLY B . n H 2 128 LYS 128 576 576 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 HOH 1 416 416 HOH TIP C . I 3 HOH 2 428 428 HOH TIP C . I 3 HOH 3 451 451 HOH TIP C . I 3 HOH 4 453 453 HOH TIP C . I 3 HOH 5 469 469 HOH TIP C . I 3 HOH 6 480 480 HOH TIP C . I 3 HOH 7 482 482 HOH TIP C . I 3 HOH 8 486 486 HOH TIP C . I 3 HOH 9 526 526 HOH TIP C . I 3 HOH 10 528 528 HOH TIP C . I 3 HOH 11 554 554 HOH TIP C . I 3 HOH 12 583 583 HOH TIP C . I 3 HOH 13 584 584 HOH TIP C . I 3 HOH 14 585 585 HOH TIP C . I 3 HOH 15 586 586 HOH TIP C . I 3 HOH 16 589 589 HOH TIP C . I 3 HOH 17 632 632 HOH TIP C . J 3 HOH 1 403 403 HOH TIP D . J 3 HOH 2 409 409 HOH TIP D . J 3 HOH 3 421 421 HOH TIP D . J 3 HOH 4 423 423 HOH TIP D . J 3 HOH 5 429 429 HOH TIP D . J 3 HOH 6 438 438 HOH TIP D . J 3 HOH 7 442 442 HOH TIP D . J 3 HOH 8 455 455 HOH TIP D . J 3 HOH 9 488 488 HOH TIP D . J 3 HOH 10 496 496 HOH TIP D . J 3 HOH 11 515 515 HOH TIP D . J 3 HOH 12 516 516 HOH TIP D . J 3 HOH 13 523 523 HOH TIP D . J 3 HOH 14 536 536 HOH TIP D . J 3 HOH 15 568 568 HOH TIP D . J 3 HOH 16 571 571 HOH TIP D . J 3 HOH 17 577 577 HOH TIP D . J 3 HOH 18 581 581 HOH TIP D . J 3 HOH 19 587 587 HOH TIP D . J 3 HOH 20 605 605 HOH TIP D . J 3 HOH 21 626 626 HOH TIP D . J 3 HOH 22 631 631 HOH TIP D . K 3 HOH 1 425 425 HOH TIP G . K 3 HOH 2 426 426 HOH TIP G . K 3 HOH 3 493 493 HOH TIP G . K 3 HOH 4 531 531 HOH TIP G . K 3 HOH 5 532 532 HOH TIP G . K 3 HOH 6 543 543 HOH TIP G . K 3 HOH 7 544 544 HOH TIP G . K 3 HOH 8 566 566 HOH TIP G . K 3 HOH 9 569 569 HOH TIP G . K 3 HOH 10 570 570 HOH TIP G . K 3 HOH 11 588 588 HOH TIP G . K 3 HOH 12 612 612 HOH TIP G . L 3 HOH 1 440 440 HOH TIP H . L 3 HOH 2 463 463 HOH TIP H . L 3 HOH 3 490 490 HOH TIP H . L 3 HOH 4 505 505 HOH TIP H . L 3 HOH 5 511 511 HOH TIP H . L 3 HOH 6 539 539 HOH TIP H . L 3 HOH 7 542 542 HOH TIP H . L 3 HOH 8 545 545 HOH TIP H . M 3 HOH 1 401 401 HOH TIP E . M 3 HOH 2 406 406 HOH TIP E . M 3 HOH 3 430 430 HOH TIP E . M 3 HOH 4 449 449 HOH TIP E . M 3 HOH 5 470 470 HOH TIP E . M 3 HOH 6 477 477 HOH TIP E . M 3 HOH 7 479 479 HOH TIP E . M 3 HOH 8 485 485 HOH TIP E . M 3 HOH 9 487 487 HOH TIP E . M 3 HOH 10 498 498 HOH TIP E . M 3 HOH 11 520 520 HOH TIP E . M 3 HOH 12 521 521 HOH TIP E . M 3 HOH 13 534 534 HOH TIP E . M 3 HOH 14 550 550 HOH TIP E . M 3 HOH 15 573 573 HOH TIP E . M 3 HOH 16 593 593 HOH TIP E . M 3 HOH 17 594 594 HOH TIP E . M 3 HOH 18 602 602 HOH TIP E . N 3 HOH 1 413 413 HOH TIP F . N 3 HOH 2 445 445 HOH TIP F . N 3 HOH 3 458 458 HOH TIP F . N 3 HOH 4 474 474 HOH TIP F . N 3 HOH 5 510 510 HOH TIP F . N 3 HOH 6 546 546 HOH TIP F . N 3 HOH 7 549 549 HOH TIP F . N 3 HOH 8 558 558 HOH TIP F . N 3 HOH 9 578 578 HOH TIP F . N 3 HOH 10 610 610 HOH TIP F . N 3 HOH 11 622 622 HOH TIP F . N 3 HOH 12 633 633 HOH TIP F . O 3 HOH 1 577 400 HOH TIP A . O 3 HOH 2 578 405 HOH TIP A . O 3 HOH 3 579 407 HOH TIP A . O 3 HOH 4 580 408 HOH TIP A . O 3 HOH 5 581 410 HOH TIP A . O 3 HOH 6 582 414 HOH TIP A . O 3 HOH 7 583 418 HOH TIP A . O 3 HOH 8 584 420 HOH TIP A . O 3 HOH 9 585 422 HOH TIP A . O 3 HOH 10 586 427 HOH TIP A . O 3 HOH 11 587 432 HOH TIP A . O 3 HOH 12 588 433 HOH TIP A . O 3 HOH 13 589 434 HOH TIP A . O 3 HOH 14 590 435 HOH TIP A . O 3 HOH 15 591 437 HOH TIP A . O 3 HOH 16 592 444 HOH TIP A . O 3 HOH 17 593 450 HOH TIP A . O 3 HOH 18 594 454 HOH TIP A . O 3 HOH 19 595 456 HOH TIP A . O 3 HOH 20 596 457 HOH TIP A . O 3 HOH 21 597 459 HOH TIP A . O 3 HOH 22 598 460 HOH TIP A . O 3 HOH 23 599 466 HOH TIP A . O 3 HOH 24 600 472 HOH TIP A . O 3 HOH 25 601 476 HOH TIP A . O 3 HOH 26 602 483 HOH TIP A . O 3 HOH 27 603 484 HOH TIP A . O 3 HOH 28 604 489 HOH TIP A . O 3 HOH 29 605 491 HOH TIP A . O 3 HOH 30 606 495 HOH TIP A . O 3 HOH 31 607 497 HOH TIP A . O 3 HOH 32 608 499 HOH TIP A . O 3 HOH 33 609 502 HOH TIP A . O 3 HOH 34 610 504 HOH TIP A . O 3 HOH 35 611 506 HOH TIP A . O 3 HOH 36 612 507 HOH TIP A . O 3 HOH 37 613 509 HOH TIP A . O 3 HOH 38 614 512 HOH TIP A . O 3 HOH 39 615 513 HOH TIP A . O 3 HOH 40 616 514 HOH TIP A . O 3 HOH 41 617 517 HOH TIP A . O 3 HOH 42 618 518 HOH TIP A . O 3 HOH 43 619 519 HOH TIP A . O 3 HOH 44 620 524 HOH TIP A . O 3 HOH 45 621 525 HOH TIP A . O 3 HOH 46 622 527 HOH TIP A . O 3 HOH 47 623 529 HOH TIP A . O 3 HOH 48 624 530 HOH TIP A . O 3 HOH 49 625 533 HOH TIP A . O 3 HOH 50 626 535 HOH TIP A . O 3 HOH 51 627 537 HOH TIP A . O 3 HOH 52 628 538 HOH TIP A . O 3 HOH 53 629 541 HOH TIP A . O 3 HOH 54 630 553 HOH TIP A . O 3 HOH 55 631 555 HOH TIP A . O 3 HOH 56 632 556 HOH TIP A . O 3 HOH 57 633 557 HOH TIP A . O 3 HOH 58 634 559 HOH TIP A . O 3 HOH 59 635 560 HOH TIP A . O 3 HOH 60 636 561 HOH TIP A . O 3 HOH 61 637 562 HOH TIP A . O 3 HOH 62 638 563 HOH TIP A . O 3 HOH 63 639 565 HOH TIP A . O 3 HOH 64 640 575 HOH TIP A . O 3 HOH 65 641 576 HOH TIP A . O 3 HOH 66 642 579 HOH TIP A . O 3 HOH 67 643 582 HOH TIP A . O 3 HOH 68 644 590 HOH TIP A . O 3 HOH 69 645 591 HOH TIP A . O 3 HOH 70 646 592 HOH TIP A . O 3 HOH 71 647 599 HOH TIP A . O 3 HOH 72 648 601 HOH TIP A . O 3 HOH 73 649 603 HOH TIP A . O 3 HOH 74 650 606 HOH TIP A . O 3 HOH 75 651 614 HOH TIP A . O 3 HOH 76 652 615 HOH TIP A . O 3 HOH 77 653 620 HOH TIP A . O 3 HOH 78 654 621 HOH TIP A . O 3 HOH 79 655 625 HOH TIP A . O 3 HOH 80 656 627 HOH TIP A . O 3 HOH 81 657 628 HOH TIP A . O 3 HOH 82 658 629 HOH TIP A . O 3 HOH 83 659 630 HOH TIP A . O 3 HOH 84 660 634 HOH TIP A . O 3 HOH 85 661 635 HOH TIP A . O 3 HOH 86 662 636 HOH TIP A . O 3 HOH 87 663 638 HOH TIP A . O 3 HOH 88 664 641 HOH TIP A . O 3 HOH 89 665 642 HOH TIP A . O 3 HOH 90 666 647 HOH TIP A . O 3 HOH 91 667 648 HOH TIP A . O 3 HOH 92 668 649 HOH TIP A . P 3 HOH 1 577 402 HOH TIP B . P 3 HOH 2 578 404 HOH TIP B . P 3 HOH 3 579 412 HOH TIP B . P 3 HOH 4 580 415 HOH TIP B . P 3 HOH 5 581 419 HOH TIP B . P 3 HOH 6 582 424 HOH TIP B . P 3 HOH 7 583 436 HOH TIP B . P 3 HOH 8 584 441 HOH TIP B . P 3 HOH 9 585 443 HOH TIP B . P 3 HOH 10 586 447 HOH TIP B . P 3 HOH 11 587 448 HOH TIP B . P 3 HOH 12 588 461 HOH TIP B . P 3 HOH 13 589 464 HOH TIP B . P 3 HOH 14 590 467 HOH TIP B . P 3 HOH 15 591 471 HOH TIP B . P 3 HOH 16 592 481 HOH TIP B . P 3 HOH 17 593 492 HOH TIP B . P 3 HOH 18 594 500 HOH TIP B . P 3 HOH 19 595 503 HOH TIP B . P 3 HOH 20 596 508 HOH TIP B . P 3 HOH 21 597 522 HOH TIP B . P 3 HOH 22 598 540 HOH TIP B . P 3 HOH 23 599 547 HOH TIP B . P 3 HOH 24 600 548 HOH TIP B . P 3 HOH 25 601 551 HOH TIP B . P 3 HOH 26 602 552 HOH TIP B . P 3 HOH 27 603 564 HOH TIP B . P 3 HOH 28 604 567 HOH TIP B . P 3 HOH 29 605 572 HOH TIP B . P 3 HOH 30 606 574 HOH TIP B . P 3 HOH 31 607 580 HOH TIP B . P 3 HOH 32 608 596 HOH TIP B . P 3 HOH 33 609 597 HOH TIP B . P 3 HOH 34 610 600 HOH TIP B . P 3 HOH 35 611 604 HOH TIP B . P 3 HOH 36 612 607 HOH TIP B . P 3 HOH 37 613 608 HOH TIP B . P 3 HOH 38 614 609 HOH TIP B . P 3 HOH 39 615 611 HOH TIP B . P 3 HOH 40 616 613 HOH TIP B . P 3 HOH 41 617 616 HOH TIP B . P 3 HOH 42 618 617 HOH TIP B . P 3 HOH 43 619 618 HOH TIP B . P 3 HOH 44 620 619 HOH TIP B . P 3 HOH 45 621 623 HOH TIP B . P 3 HOH 46 622 624 HOH TIP B . P 3 HOH 47 623 639 HOH TIP B . P 3 HOH 48 624 643 HOH TIP B . P 3 HOH 49 625 644 HOH TIP B . P 3 HOH 50 626 645 HOH TIP B . P 3 HOH 51 627 646 HOH TIP B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-03-30 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.0 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 450 ? ? -74.56 -167.01 2 1 ASN A 461 ? ? -90.41 -144.96 3 1 TRP A 464 ? ? -35.00 -74.54 4 1 ALA A 468 ? ? -57.65 0.28 5 1 ASP A 471 ? ? 59.18 -128.17 6 1 ASP A 486 ? ? 53.18 6.83 7 1 LYS A 487 ? ? -67.98 -170.07 8 1 LYS A 490 ? ? -73.70 -73.35 9 1 PRO A 548 ? ? -53.80 -179.99 10 1 PRO B 450 ? ? -66.90 -160.90 11 1 ASN B 461 ? ? -77.77 -147.61 12 1 TRP B 464 ? ? -27.80 -84.10 13 1 ASP B 471 ? ? 58.30 -114.00 14 1 ARG B 485 ? ? -39.18 128.04 15 1 ASP B 486 ? ? 54.87 84.95 16 1 GLN B 551 ? ? -85.32 34.06 17 1 TYR B 556 ? ? -142.18 32.87 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA C 4 ? ? 0.080 'SIDE CHAIN' 2 1 DA D 12 ? ? 0.072 'SIDE CHAIN' 3 1 DG G 1 ? ? 0.065 'SIDE CHAIN' 4 1 DC E 2 ? ? 0.079 'SIDE CHAIN' 5 1 DA E 4 ? ? 0.079 'SIDE CHAIN' 6 1 DG F 15 ? ? 0.054 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 PHE N N N N 379 PHE CA C N S 380 PHE C C N N 381 PHE O O N N 382 PHE CB C N N 383 PHE CG C Y N 384 PHE CD1 C Y N 385 PHE CD2 C Y N 386 PHE CE1 C Y N 387 PHE CE2 C Y N 388 PHE CZ C Y N 389 PHE OXT O N N 390 PHE H H N N 391 PHE H2 H N N 392 PHE HA H N N 393 PHE HB2 H N N 394 PHE HB3 H N N 395 PHE HD1 H N N 396 PHE HD2 H N N 397 PHE HE1 H N N 398 PHE HE2 H N N 399 PHE HZ H N N 400 PHE HXT H N N 401 PRO N N N N 402 PRO CA C N S 403 PRO C C N N 404 PRO O O N N 405 PRO CB C N N 406 PRO CG C N N 407 PRO CD C N N 408 PRO OXT O N N 409 PRO H H N N 410 PRO HA H N N 411 PRO HB2 H N N 412 PRO HB3 H N N 413 PRO HG2 H N N 414 PRO HG3 H N N 415 PRO HD2 H N N 416 PRO HD3 H N N 417 PRO HXT H N N 418 SER N N N N 419 SER CA C N S 420 SER C C N N 421 SER O O N N 422 SER CB C N N 423 SER OG O N N 424 SER OXT O N N 425 SER H H N N 426 SER H2 H N N 427 SER HA H N N 428 SER HB2 H N N 429 SER HB3 H N N 430 SER HG H N N 431 SER HXT H N N 432 THR N N N N 433 THR CA C N S 434 THR C C N N 435 THR O O N N 436 THR CB C N R 437 THR OG1 O N N 438 THR CG2 C N N 439 THR OXT O N N 440 THR H H N N 441 THR H2 H N N 442 THR HA H N N 443 THR HB H N N 444 THR HG1 H N N 445 THR HG21 H N N 446 THR HG22 H N N 447 THR HG23 H N N 448 THR HXT H N N 449 TRP N N N N 450 TRP CA C N S 451 TRP C C N N 452 TRP O O N N 453 TRP CB C N N 454 TRP CG C Y N 455 TRP CD1 C Y N 456 TRP CD2 C Y N 457 TRP NE1 N Y N 458 TRP CE2 C Y N 459 TRP CE3 C Y N 460 TRP CZ2 C Y N 461 TRP CZ3 C Y N 462 TRP CH2 C Y N 463 TRP OXT O N N 464 TRP H H N N 465 TRP H2 H N N 466 TRP HA H N N 467 TRP HB2 H N N 468 TRP HB3 H N N 469 TRP HD1 H N N 470 TRP HE1 H N N 471 TRP HE3 H N N 472 TRP HZ2 H N N 473 TRP HZ3 H N N 474 TRP HH2 H N N 475 TRP HXT H N N 476 TYR N N N N 477 TYR CA C N S 478 TYR C C N N 479 TYR O O N N 480 TYR CB C N N 481 TYR CG C Y N 482 TYR CD1 C Y N 483 TYR CD2 C Y N 484 TYR CE1 C Y N 485 TYR CE2 C Y N 486 TYR CZ C Y N 487 TYR OH O N N 488 TYR OXT O N N 489 TYR H H N N 490 TYR H2 H N N 491 TYR HA H N N 492 TYR HB2 H N N 493 TYR HB3 H N N 494 TYR HD1 H N N 495 TYR HD2 H N N 496 TYR HE1 H N N 497 TYR HE2 H N N 498 TYR HH H N N 499 TYR HXT H N N 500 VAL N N N N 501 VAL CA C N S 502 VAL C C N N 503 VAL O O N N 504 VAL CB C N N 505 VAL CG1 C N N 506 VAL CG2 C N N 507 VAL OXT O N N 508 VAL H H N N 509 VAL H2 H N N 510 VAL HA H N N 511 VAL HB H N N 512 VAL HG11 H N N 513 VAL HG12 H N N 514 VAL HG13 H N N 515 VAL HG21 H N N 516 VAL HG22 H N N 517 VAL HG23 H N N 518 VAL HXT H N N 519 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 PHE N CA sing N N 373 PHE N H sing N N 374 PHE N H2 sing N N 375 PHE CA C sing N N 376 PHE CA CB sing N N 377 PHE CA HA sing N N 378 PHE C O doub N N 379 PHE C OXT sing N N 380 PHE CB CG sing N N 381 PHE CB HB2 sing N N 382 PHE CB HB3 sing N N 383 PHE CG CD1 doub Y N 384 PHE CG CD2 sing Y N 385 PHE CD1 CE1 sing Y N 386 PHE CD1 HD1 sing N N 387 PHE CD2 CE2 doub Y N 388 PHE CD2 HD2 sing N N 389 PHE CE1 CZ doub Y N 390 PHE CE1 HE1 sing N N 391 PHE CE2 CZ sing Y N 392 PHE CE2 HE2 sing N N 393 PHE CZ HZ sing N N 394 PHE OXT HXT sing N N 395 PRO N CA sing N N 396 PRO N CD sing N N 397 PRO N H sing N N 398 PRO CA C sing N N 399 PRO CA CB sing N N 400 PRO CA HA sing N N 401 PRO C O doub N N 402 PRO C OXT sing N N 403 PRO CB CG sing N N 404 PRO CB HB2 sing N N 405 PRO CB HB3 sing N N 406 PRO CG CD sing N N 407 PRO CG HG2 sing N N 408 PRO CG HG3 sing N N 409 PRO CD HD2 sing N N 410 PRO CD HD3 sing N N 411 PRO OXT HXT sing N N 412 SER N CA sing N N 413 SER N H sing N N 414 SER N H2 sing N N 415 SER CA C sing N N 416 SER CA CB sing N N 417 SER CA HA sing N N 418 SER C O doub N N 419 SER C OXT sing N N 420 SER CB OG sing N N 421 SER CB HB2 sing N N 422 SER CB HB3 sing N N 423 SER OG HG sing N N 424 SER OXT HXT sing N N 425 THR N CA sing N N 426 THR N H sing N N 427 THR N H2 sing N N 428 THR CA C sing N N 429 THR CA CB sing N N 430 THR CA HA sing N N 431 THR C O doub N N 432 THR C OXT sing N N 433 THR CB OG1 sing N N 434 THR CB CG2 sing N N 435 THR CB HB sing N N 436 THR OG1 HG1 sing N N 437 THR CG2 HG21 sing N N 438 THR CG2 HG22 sing N N 439 THR CG2 HG23 sing N N 440 THR OXT HXT sing N N 441 TRP N CA sing N N 442 TRP N H sing N N 443 TRP N H2 sing N N 444 TRP CA C sing N N 445 TRP CA CB sing N N 446 TRP CA HA sing N N 447 TRP C O doub N N 448 TRP C OXT sing N N 449 TRP CB CG sing N N 450 TRP CB HB2 sing N N 451 TRP CB HB3 sing N N 452 TRP CG CD1 doub Y N 453 TRP CG CD2 sing Y N 454 TRP CD1 NE1 sing Y N 455 TRP CD1 HD1 sing N N 456 TRP CD2 CE2 doub Y N 457 TRP CD2 CE3 sing Y N 458 TRP NE1 CE2 sing Y N 459 TRP NE1 HE1 sing N N 460 TRP CE2 CZ2 sing Y N 461 TRP CE3 CZ3 doub Y N 462 TRP CE3 HE3 sing N N 463 TRP CZ2 CH2 doub Y N 464 TRP CZ2 HZ2 sing N N 465 TRP CZ3 CH2 sing Y N 466 TRP CZ3 HZ3 sing N N 467 TRP CH2 HH2 sing N N 468 TRP OXT HXT sing N N 469 TYR N CA sing N N 470 TYR N H sing N N 471 TYR N H2 sing N N 472 TYR CA C sing N N 473 TYR CA CB sing N N 474 TYR CA HA sing N N 475 TYR C O doub N N 476 TYR C OXT sing N N 477 TYR CB CG sing N N 478 TYR CB HB2 sing N N 479 TYR CB HB3 sing N N 480 TYR CG CD1 doub Y N 481 TYR CG CD2 sing Y N 482 TYR CD1 CE1 sing Y N 483 TYR CD1 HD1 sing N N 484 TYR CD2 CE2 doub Y N 485 TYR CD2 HD2 sing N N 486 TYR CE1 CZ doub Y N 487 TYR CE1 HE1 sing N N 488 TYR CE2 CZ sing Y N 489 TYR CE2 HE2 sing N N 490 TYR CZ OH sing N N 491 TYR OH HH sing N N 492 TYR OXT HXT sing N N 493 VAL N CA sing N N 494 VAL N H sing N N 495 VAL N H2 sing N N 496 VAL CA C sing N N 497 VAL CA CB sing N N 498 VAL CA HA sing N N 499 VAL C O doub N N 500 VAL C OXT sing N N 501 VAL CB CG1 sing N N 502 VAL CB CG2 sing N N 503 VAL CB HB sing N N 504 VAL CG1 HG11 sing N N 505 VAL CG1 HG12 sing N N 506 VAL CG1 HG13 sing N N 507 VAL CG2 HG21 sing N N 508 VAL CG2 HG22 sing N N 509 VAL CG2 HG23 sing N N 510 VAL OXT HXT sing N N 511 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1PT3 'double helix' 1PT3 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.317 -0.173 -0.306 -12.241 -2.338 -2.600 1 C_DG1:DC16_D C 1 ? D 16 ? 19 1 1 A DC 2 1_555 B DG 7 1_555 0.588 -0.345 -0.209 -8.058 -0.194 0.410 2 C_DC2:DG15_D C 2 ? D 15 ? 19 1 1 A DG 3 1_555 B DC 6 1_555 0.046 -0.233 -0.359 0.706 -8.218 -0.213 3 C_DG3:DC14_D C 3 ? D 14 ? 19 1 1 A DA 4 1_555 B DT 5 1_555 0.176 -0.352 -0.144 -6.772 -7.987 -1.493 4 C_DA4:DT13_D C 4 ? D 13 ? 20 1 1 A DT 5 1_555 B DA 4 1_555 -0.327 -0.184 -0.446 2.410 -2.933 0.978 5 C_DT5:DA12_D C 5 ? D 12 ? 20 1 1 A DC 6 1_555 B DG 3 1_555 0.250 0.040 -0.120 3.516 -12.827 5.013 6 C_DC6:DG11_D C 6 ? D 11 ? 19 1 1 A DG 7 1_555 B DC 2 1_555 0.098 -0.180 0.183 3.761 -1.188 3.212 7 C_DG7:DC10_D C 7 ? D 10 ? 19 1 1 A DC 8 1_555 B DG 1 1_555 -0.024 -0.175 -0.297 1.709 -5.299 -3.448 8 C_DC8:DG9_D C 8 ? D 9 ? 19 1 1 C DG 1 1_555 D DC 8 1_555 -0.285 -0.043 0.078 3.097 -8.227 2.101 9 G_DG1:DC16_H G 1 ? H 16 ? 19 1 1 C DC 2 1_555 D DG 7 1_555 -1.303 -0.015 -0.214 9.364 -3.570 -16.365 10 G_DC2:DG15_H G 2 ? H 15 ? ? 1 1 C DG 3 1_555 D DC 6 1_555 0.087 0.128 -0.016 6.259 -6.943 -0.406 11 G_DG3:DC14_H G 3 ? H 14 ? 19 1 1 C DA 4 1_555 D DT 5 1_555 0.407 0.145 0.294 5.057 -12.882 3.430 12 G_DA4:DT13_H G 4 ? H 13 ? 20 1 1 C DT 5 1_555 D DA 4 1_555 0.786 -0.488 0.382 1.318 -9.379 -0.959 13 G_DT5:DA12_H G 5 ? H 12 ? 20 1 1 C DC 6 1_555 D DG 3 1_555 -0.084 -0.154 0.599 -14.494 -19.115 -2.918 14 G_DC6:DG11_H G 6 ? H 11 ? 19 1 1 C DG 7 1_555 D DC 2 1_555 -0.381 -0.209 -0.215 -12.101 3.414 -0.631 15 G_DG7:DC10_H G 7 ? H 10 ? 19 1 1 C DC 8 1_555 D DG 1 1_555 0.159 -0.121 -0.067 6.202 1.461 -1.632 16 G_DC8:DG9_H G 8 ? H 9 ? 19 1 1 F DG 1 1_555 E DC 8 1_555 -0.307 -0.002 0.254 1.343 -7.063 3.812 17 F_DG9:DC8_E F 9 ? E 8 ? 19 1 1 F DC 2 1_555 E DG 7 1_555 0.542 -0.025 0.125 2.456 -1.597 4.007 18 F_DC10:DG7_E F 10 ? E 7 ? 19 1 1 F DG 3 1_555 E DC 6 1_555 -0.619 -0.267 0.323 4.934 -15.404 3.065 19 F_DG11:DC6_E F 11 ? E 6 ? 19 1 1 F DA 4 1_555 E DT 5 1_555 0.055 -0.180 0.272 2.808 -0.929 -3.480 20 F_DA12:DT5_E F 12 ? E 5 ? 20 1 1 F DT 5 1_555 E DA 4 1_555 -0.123 -0.042 -0.435 11.661 -11.305 4.211 21 F_DT13:DA4_E F 13 ? E 4 ? 20 1 1 F DC 6 1_555 E DG 3 1_555 -0.123 0.029 0.103 -9.976 -12.837 2.646 22 F_DC14:DG3_E F 14 ? E 3 ? 19 1 1 F DG 7 1_555 E DC 2 1_555 0.532 0.071 0.139 2.193 -2.693 -3.292 23 F_DG15:DC2_E F 15 ? E 2 ? 19 1 1 F DC 8 1_555 E DG 1 1_555 0.157 -0.403 -0.145 3.130 3.134 -8.910 24 F_DC16:DG1_E F 16 ? E 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DC 2 1_555 B DG 7 1_555 0.054 -0.783 3.298 1.952 4.582 33.552 -2.074 0.219 3.165 7.884 -3.359 33.909 1 CC_DG1DC2:DG15DC16_DD C 1 ? D 16 ? C 2 ? D 15 ? 1 A DC 2 1_555 B DG 7 1_555 A DG 3 1_555 B DC 6 1_555 0.037 0.610 3.312 1.401 10.323 29.915 -0.877 0.203 3.332 19.277 -2.616 31.638 2 CC_DC2DG3:DC14DG15_DD C 2 ? D 15 ? C 3 ? D 14 ? 1 A DG 3 1_555 B DC 6 1_555 A DA 4 1_555 B DT 5 1_555 0.417 -0.829 3.462 -2.966 13.213 31.042 -3.577 -1.200 2.835 23.345 5.240 33.801 3 CC_DG3DA4:DT13DC14_DD C 3 ? D 14 ? C 4 ? D 13 ? 1 A DA 4 1_555 B DT 5 1_555 A DT 5 1_555 B DA 4 1_555 -0.407 -0.864 3.157 3.337 3.200 32.571 -2.043 1.259 3.006 5.669 -5.913 32.889 4 CC_DA4DT5:DA12DT13_DD C 4 ? D 13 ? C 5 ? D 12 ? 1 A DT 5 1_555 B DA 4 1_555 A DC 6 1_555 B DG 3 1_555 -0.105 -0.794 3.438 -2.426 -2.717 35.656 -0.876 -0.199 3.486 -4.422 3.949 35.836 5 CC_DT5DC6:DG11DA12_DD C 5 ? D 12 ? C 6 ? D 11 ? 1 A DC 6 1_555 B DG 3 1_555 A DG 7 1_555 B DC 2 1_555 0.047 0.176 3.294 -1.776 10.656 29.262 -1.743 -0.433 3.155 20.243 3.374 31.152 6 CC_DC6DG7:DC10DG11_DD C 6 ? D 11 ? C 7 ? D 10 ? 1 A DG 7 1_555 B DC 2 1_555 A DC 8 1_555 B DG 1 1_555 -0.273 -0.274 3.352 2.857 2.034 28.669 -1.009 1.193 3.283 4.088 -5.742 28.878 7 CC_DG7DC8:DG9DC10_DD C 7 ? D 10 ? C 8 ? D 9 ? 1 A DC 8 1_555 B DG 1 1_555 C DG 1 1_555 D DC 8 1_555 0.160 1.064 3.409 -0.627 3.125 -30.690 -2.624 0.175 3.289 -5.885 -1.181 -30.851 8 CG_DC8DG1:DC16DG9_HD C 8 ? D 9 ? G 1 ? H 16 ? 1 C DG 1 1_555 D DC 8 1_555 C DC 2 1_555 D DG 7 1_555 -1.097 -0.102 3.053 -0.559 -1.223 26.667 0.077 2.239 3.076 -2.649 1.212 26.700 9 GG_DG1DC2:DG15DC16_HH G 1 ? H 16 ? G 2 ? H 15 ? 1 C DC 2 1_555 D DG 7 1_555 C DG 3 1_555 D DC 6 1_555 0.480 0.327 3.573 0.017 3.743 38.918 -0.005 -0.715 3.588 5.602 -0.025 39.091 10 GG_DC2DG3:DC14DG15_HH G 2 ? H 15 ? G 3 ? H 14 ? 1 C DG 3 1_555 D DC 6 1_555 C DA 4 1_555 D DT 5 1_555 0.462 -0.608 3.054 -2.310 3.854 43.548 -1.155 -0.823 2.965 5.178 3.104 43.768 11 GG_DG3DA4:DT13DC14_HH G 3 ? H 14 ? G 4 ? H 13 ? 1 C DA 4 1_555 D DT 5 1_555 C DT 5 1_555 D DA 4 1_555 0.105 -0.706 3.385 -0.632 -5.366 35.328 -0.337 -0.266 3.449 -8.779 1.035 35.726 12 GG_DA4DT5:DA12DT13_HH G 4 ? H 13 ? G 5 ? H 12 ? 1 C DT 5 1_555 D DA 4 1_555 C DC 6 1_555 D DG 3 1_555 -0.415 -0.613 3.503 -0.726 -3.144 34.412 -0.507 0.578 3.551 -5.300 1.224 34.559 13 GG_DT5DC6:DG11DA12_HH G 5 ? H 12 ? G 6 ? H 11 ? 1 C DC 6 1_555 D DG 3 1_555 C DG 7 1_555 D DC 2 1_555 0.522 0.450 3.243 5.518 8.932 36.936 -0.455 -0.090 3.302 13.761 -8.500 38.349 14 GG_DC6DG7:DC10DG11_HH G 6 ? H 11 ? G 7 ? H 10 ? 1 C DG 7 1_555 D DC 2 1_555 C DC 8 1_555 D DG 1 1_555 -0.574 0.201 2.837 -2.481 3.437 25.473 -0.394 0.676 2.881 7.725 5.578 25.818 15 GG_DG7DC8:DG9DC10_HH G 7 ? H 10 ? G 8 ? H 9 ? 1 C DC 8 1_555 D DG 1 1_555 F DG 1 1_555 E DC 8 1_555 0.320 1.150 3.544 -0.884 2.133 -29.290 -2.759 0.427 3.461 -4.209 -1.745 -29.379 16 GF_DC8DG9:DC8DG9_EH G 8 ? H 9 ? F 9 ? E 8 ? 1 F DG 1 1_555 E DC 8 1_555 F DC 2 1_555 E DG 7 1_555 -0.521 -0.139 3.328 1.370 3.291 31.546 -0.866 1.207 3.272 6.030 -2.511 31.741 17 FF_DG9DC10:DG7DC8_EE F 9 ? E 8 ? F 10 ? E 7 ? 1 F DC 2 1_555 E DG 7 1_555 F DG 3 1_555 E DC 6 1_555 0.037 -0.211 3.124 0.080 2.881 28.217 -1.063 -0.057 3.088 5.891 -0.163 28.360 18 FF_DC10DG11:DC6DG7_EE F 10 ? E 7 ? F 11 ? E 6 ? 1 F DG 3 1_555 E DC 6 1_555 F DA 4 1_555 E DT 5 1_555 0.079 -0.664 3.269 -0.924 -6.342 40.834 -0.250 -0.213 3.329 -9.022 1.314 41.312 19 FF_DG11DA12:DT5DC6_EE F 11 ? E 6 ? F 12 ? E 5 ? 1 F DA 4 1_555 E DT 5 1_555 F DT 5 1_555 E DA 4 1_555 0.427 -0.899 3.156 4.909 -1.826 34.569 -1.227 0.016 3.227 -3.050 -8.202 34.951 20 FF_DA12DT13:DA4DT5_EE F 12 ? E 5 ? F 13 ? E 4 ? 1 F DT 5 1_555 E DA 4 1_555 F DC 6 1_555 E DG 3 1_555 -0.787 -0.935 3.818 -6.794 5.950 31.005 -2.917 0.005 3.667 10.844 12.383 32.263 21 FF_DT13DC14:DG3DA4_EE F 13 ? E 4 ? F 14 ? E 3 ? 1 F DC 6 1_555 E DG 3 1_555 F DG 7 1_555 E DC 2 1_555 -0.390 0.637 3.124 -2.191 14.325 34.078 -0.930 0.320 3.151 23.187 3.546 36.947 22 FF_DC14DG15:DC2DG3_EE F 14 ? E 3 ? F 15 ? E 2 ? 1 F DG 7 1_555 E DC 2 1_555 F DC 8 1_555 E DG 1 1_555 0.154 -0.767 3.465 0.879 4.139 29.782 -2.364 -0.109 3.334 8.001 -1.699 30.074 23 FF_DG15DC16:DG1DC2_EE F 15 ? E 2 ? F 16 ? E 1 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7CEI _pdbx_initial_refinement_model.details ? #