HEADER METAL BINDING PROTEIN 03-JUL-03 1PXE TITLE SOLUTION STRUCTURE OF A CCHHC DOMAIN OF NEURAL ZINC FINGER FACTOR-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEURAL ZINC FINGER TRANSCRIPTION FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ZINC BINDING DOMAIN, CCHHC DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: NZF-1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNZF-1E KEYWDS CCHHC ZINC BINDING DOMAIN, NEURAL ZINC FINGER FACTOR-1, DNA BINDING KEYWDS 2 DOMAIN, METAL BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 21 MDLTYP MINIMIZED AVERAGE AUTHOR H.J.BERKOVITS-CYMET,B.T.AMANN,J.M.BERG REVDAT 4 21-DEC-22 1PXE 1 SEQADV REVDAT 3 02-MAR-22 1PXE 1 REMARK REVDAT 2 24-FEB-09 1PXE 1 VERSN REVDAT 1 10-FEB-04 1PXE 0 JRNL AUTH H.J.BERKOVITS-CYMET,B.T.AMANN,J.M.BERG JRNL TITL SOLUTION STRUCTURE OF A CCHHC DOMAIN OF NEURAL ZINC FINGER JRNL TITL 2 FACTOR-1 AND ITS IMPLICATIONS FOR DNA BINDING. JRNL REF BIOCHEMISTRY V. 43 898 2004 JRNL REFN ISSN 0006-2960 JRNL PMID 14744132 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMR 6.1B, CNS 1.1 REMARK 3 AUTHORS : WARREN, NILGES, KUSZEWSKI, CLORE, BRUNGER (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 ZINC-LIGAND BOND LENGTHS WERE CONSTRAINED AS FOLLOWS: REMARK 3 ZN-S(CYS): 2.30 ANGSTROMS REMARK 3 ZN-N(HIS): 2.00 ANGSTROMS REMARK 3 REMARK 3 THE LIGAND CONFIGURATION AROUND THE ZINC ION WAS CONSTRAINED TO REMARK 3 TETRAHEDRAL GEOMETRY BY THE FOLLOWING CONSTRAINTS: REMARK 3 ASSIGN (RESID 20 AND NAME SG) (RESID 25 AND NAME SG) 3.76 REMARK 3 0.20 0.20 REMARK 3 ASSIGN (RESID 20 AND NAME SG) (RESID 44 AND NAME SG) 3.76 REMARK 3 0.20 0.20 REMARK 3 ASSIGN (RESID 25 AND NAME SG) (RESID 44 AND NAME SG) 3.76 REMARK 3 0.20 0.20 REMARK 3 ASSIGN (RESID 20 AND NAME SG) (RESID 38 AND NAME NE2) 3.52 REMARK 3 0.20 0.20 REMARK 3 ASSIGN (RESID 25 AND NAME SG) (RESID 38 AND NAME NE2) 3.52 REMARK 3 0.20 0.20 REMARK 3 ASSIGN (RESID 44 AND NAME SG) (RESID 38 AND NAME NE2) 3.52 REMARK 3 0.20 0.20 REMARK 3 REMARK 3 RESIDUES 4-63 WERE INCLUDED IN THE STRUCTURE CALCULATIONS. REMARK 4 REMARK 4 1PXE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000019665. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293; 303; 303 REMARK 210 PH : 6.95; 7.02; 7.00 REMARK 210 IONIC STRENGTH : NO SALT ADDED; NO SALT ADDED; NO REMARK 210 SALT ADDED REMARK 210 PRESSURE : AMBIENT; AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 2.3 MM NZF-1(487-548) 2.3 MM REMARK 210 ZNCL2 55 MM DEUTERATED TRIS; 2.8 REMARK 210 MM NZF-1(487-548), U-15N 2.8 MM REMARK 210 ZNCL2 36 MM DEUTERATED TRIS; 1.5 REMARK 210 MM NZF-1(487-548), U-15N 1.5 MM REMARK 210 CDCL2 (CD-113) 36 MM DEUTERATED REMARK 210 TRIS REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : DQF-COSY; 2D TOCSY; 2D NOESY; REMARK 210 15N_HSQC; 15N_HSQC_LONGRANGE; 3D_ REMARK 210 HSQC-TOCSY; 3D_HSQC-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 98, IN HOUSE PERL SCRIPTS, REMARK 210 CNS 1.1 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 30 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 21 REMARK 210 CONFORMERS, SELECTION CRITERIA : THE SUBMITTED CONFORMER MODELS REMARK 210 ARE THOSE WITH THE LOWEST REMARK 210 ENERGIES. REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-21 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 VAL A 3 REMARK 465 LYS A 4 REMARK 465 LYS A 5 REMARK 465 PRO A 6 REMARK 465 TYR A 7 REMARK 465 TYR A 8 REMARK 465 ASP A 9 REMARK 465 PRO A 10 REMARK 465 SER A 11 REMARK 465 ARG A 12 REMARK 465 THR A 13 REMARK 465 GLU A 14 REMARK 465 LYS A 15 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C HIS A 38 H ARG A 39 0.10 REMARK 500 O HIS A 38 N ARG A 39 0.11 REMARK 500 C HIS A 58 H GLU A 59 0.34 REMARK 500 O HIS A 58 N GLU A 59 0.36 REMARK 500 O HIS A 58 H GLU A 59 0.49 REMARK 500 C ARG A 16 H GLU A 17 0.61 REMARK 500 C SER A 18 H LYS A 19 0.64 REMARK 500 O HIS A 38 H ARG A 39 0.64 REMARK 500 O ARG A 16 N GLU A 17 0.65 REMARK 500 C LEU A 62 H LYS A 63 0.65 REMARK 500 O ARG A 16 H GLU A 17 0.67 REMARK 500 O SER A 18 N LYS A 19 0.68 REMARK 500 O LEU A 62 N LYS A 63 0.70 REMARK 500 O SER A 18 H LYS A 19 0.73 REMARK 500 HB VAL A 50 HD3 PRO A 51 0.75 REMARK 500 C GLU A 59 H ASN A 60 0.80 REMARK 500 O LEU A 62 H LYS A 63 0.85 REMARK 500 CB VAL A 50 HD3 PRO A 51 0.89 REMARK 500 O GLU A 59 N ASN A 60 0.90 REMARK 500 C GLU A 17 H SER A 18 0.90 REMARK 500 O GLU A 17 H SER A 18 0.93 REMARK 500 HB VAL A 50 HD2 PRO A 51 0.93 REMARK 500 HB2 PRO A 51 HD2 PRO A 52 0.94 REMARK 500 C ASN A 60 H VAL A 61 0.94 REMARK 500 O GLU A 17 N SER A 18 0.96 REMARK 500 C MET A 57 H HIS A 58 1.04 REMARK 500 C ARG A 49 H VAL A 50 1.06 REMARK 500 O ASN A 60 N VAL A 61 1.06 REMARK 500 C ALA A 56 H MET A 57 1.09 REMARK 500 HD23 LEU A 41 HG3 MET A 57 1.13 REMARK 500 O MET A 57 N HIS A 58 1.13 REMARK 500 O ARG A 49 N VAL A 50 1.17 REMARK 500 HD22 LEU A 41 HG3 MET A 57 1.18 REMARK 500 HB VAL A 50 CD PRO A 51 1.20 REMARK 500 O VAL A 50 N PRO A 51 1.21 REMARK 500 O ALA A 56 N MET A 57 1.25 REMARK 500 C LEU A 41 H SER A 42 1.25 REMARK 500 O ARG A 16 HB2 GLU A 17 1.26 REMARK 500 C SER A 18 HG2 LYS A 19 1.26 REMARK 500 O HIS A 58 CA GLU A 59 1.27 REMARK 500 O GLU A 59 H ASN A 60 1.27 REMARK 500 O SER A 18 HG2 LYS A 19 1.29 REMARK 500 HA SER A 18 HG2 LYS A 19 1.31 REMARK 500 CB VAL A 50 HD2 PRO A 51 1.31 REMARK 500 HD21 LEU A 41 HG3 MET A 57 1.31 REMARK 500 HG11 VAL A 50 HD3 PRO A 51 1.31 REMARK 500 CG1 VAL A 50 HD3 PRO A 51 1.32 REMARK 500 HB2 PRO A 51 CD PRO A 52 1.32 REMARK 500 CA ALA A 56 H MET A 57 1.32 REMARK 500 O ALA A 56 O MET A 57 1.33 REMARK 500 REMARK 500 THIS ENTRY HAS 122 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 1 ARG A 16 N ARG A 16 CA -0.534 REMARK 500 1 ARG A 16 CA ARG A 16 CB -1.021 REMARK 500 1 ARG A 16 CB ARG A 16 CG -0.891 REMARK 500 1 ARG A 16 CG ARG A 16 CD -0.868 REMARK 500 1 ARG A 16 CD ARG A 16 NE -0.785 REMARK 500 1 ARG A 16 NE ARG A 16 CZ -0.822 REMARK 500 1 ARG A 16 CZ ARG A 16 NH1 -1.012 REMARK 500 1 ARG A 16 CZ ARG A 16 NH2 -0.723 REMARK 500 1 ARG A 16 CA ARG A 16 C -0.386 REMARK 500 1 ARG A 16 C ARG A 16 O -0.904 REMARK 500 1 ARG A 16 C GLU A 17 N -0.598 REMARK 500 1 GLU A 17 N GLU A 17 CA -0.346 REMARK 500 1 GLU A 17 CA GLU A 17 CB -0.923 REMARK 500 1 GLU A 17 CB GLU A 17 CG -0.942 REMARK 500 1 GLU A 17 CG GLU A 17 CD -1.045 REMARK 500 1 GLU A 17 CD GLU A 17 OE1 -0.963 REMARK 500 1 GLU A 17 CD GLU A 17 OE2 -1.158 REMARK 500 1 GLU A 17 CA GLU A 17 C -0.375 REMARK 500 1 GLU A 17 C GLU A 17 O -1.073 REMARK 500 1 GLU A 17 C SER A 18 N -0.384 REMARK 500 1 SER A 18 N SER A 18 CA -0.306 REMARK 500 1 SER A 18 CA SER A 18 CB -0.464 REMARK 500 1 SER A 18 CB SER A 18 OG -0.895 REMARK 500 1 SER A 18 CA SER A 18 C -0.644 REMARK 500 1 SER A 18 C SER A 18 O -0.974 REMARK 500 1 SER A 18 C LYS A 19 N -0.676 REMARK 500 1 LYS A 19 N LYS A 19 CA -0.598 REMARK 500 1 LYS A 19 CA LYS A 19 CB -0.651 REMARK 500 1 LYS A 19 CB LYS A 19 CG -0.315 REMARK 500 1 LYS A 19 CG LYS A 19 CD -1.038 REMARK 500 1 LYS A 19 CD LYS A 19 CE -0.540 REMARK 500 1 LYS A 19 CE LYS A 19 NZ -1.194 REMARK 500 1 CYS A 20 C CYS A 20 O -0.227 REMARK 500 1 CYS A 20 C PRO A 21 N -0.338 REMARK 500 1 PRO A 21 CA PRO A 21 CB -0.283 REMARK 500 1 PRO A 21 CG PRO A 21 CD -0.213 REMARK 500 1 PRO A 21 CD PRO A 21 N -0.316 REMARK 500 1 PRO A 21 CA PRO A 21 C -0.139 REMARK 500 1 PRO A 21 C THR A 22 N -0.193 REMARK 500 1 THR A 22 N THR A 22 CA -0.137 REMARK 500 1 THR A 22 CA THR A 22 CB -0.201 REMARK 500 1 THR A 22 CB THR A 22 OG1 -0.877 REMARK 500 1 THR A 22 CB THR A 22 CG2 -0.756 REMARK 500 1 PRO A 23 CD PRO A 23 N -0.085 REMARK 500 1 PRO A 23 C PRO A 23 O -0.144 REMARK 500 1 PRO A 23 C GLY A 24 N -0.165 REMARK 500 1 GLY A 24 C GLY A 24 O -0.149 REMARK 500 1 ASP A 26 CG ASP A 26 OD1 -0.613 REMARK 500 1 ASP A 26 CG ASP A 26 OD2 -0.649 REMARK 500 1 THR A 28 C THR A 28 O -0.179 REMARK 500 REMARK 500 THIS ENTRY HAS 187 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 ARG A 16 N - CA - CB ANGL. DEV. = -29.6 DEGREES REMARK 500 1 ARG A 16 CA - CB - CG ANGL. DEV. = 38.9 DEGREES REMARK 500 1 ARG A 16 CB - CG - CD ANGL. DEV. = 62.9 DEGREES REMARK 500 1 ARG A 16 CG - CD - NE ANGL. DEV. = 36.5 DEGREES REMARK 500 1 ARG A 16 CD - NE - CZ ANGL. DEV. = 27.1 DEGREES REMARK 500 1 ARG A 16 NE - CZ - NH1 ANGL. DEV. = -32.0 DEGREES REMARK 500 1 ARG A 16 NE - CZ - NH2 ANGL. DEV. = 28.4 DEGREES REMARK 500 1 ARG A 16 N - CA - C ANGL. DEV. = 34.3 DEGREES REMARK 500 1 ARG A 16 CA - C - O ANGL. DEV. = 17.9 DEGREES REMARK 500 1 ARG A 16 CA - C - N ANGL. DEV. = 43.2 DEGREES REMARK 500 1 ARG A 16 O - C - N ANGL. DEV. = -61.2 DEGREES REMARK 500 1 GLU A 17 C - N - CA ANGL. DEV. = 40.2 DEGREES REMARK 500 1 GLU A 17 N - CA - CB ANGL. DEV. = -11.1 DEGREES REMARK 500 1 GLU A 17 CB - CG - CD ANGL. DEV. = 52.7 DEGREES REMARK 500 1 GLU A 17 OE1 - CD - OE2 ANGL. DEV. = -85.4 DEGREES REMARK 500 1 GLU A 17 CG - CD - OE1 ANGL. DEV. = 52.6 DEGREES REMARK 500 1 GLU A 17 CG - CD - OE2 ANGL. DEV. = 32.8 DEGREES REMARK 500 1 GLU A 17 N - CA - C ANGL. DEV. = 33.3 DEGREES REMARK 500 1 GLU A 17 CA - C - O ANGL. DEV. = -16.6 DEGREES REMARK 500 1 GLU A 17 CA - C - N ANGL. DEV. = 52.5 DEGREES REMARK 500 1 GLU A 17 O - C - N ANGL. DEV. = -36.0 DEGREES REMARK 500 1 SER A 18 C - N - CA ANGL. DEV. = 48.9 DEGREES REMARK 500 1 SER A 18 CB - CA - C ANGL. DEV. = -23.6 DEGREES REMARK 500 1 SER A 18 N - CA - CB ANGL. DEV. = 23.1 DEGREES REMARK 500 1 SER A 18 CA - CB - OG ANGL. DEV. = 33.0 DEGREES REMARK 500 1 SER A 18 CA - C - N ANGL. DEV. = 40.7 DEGREES REMARK 500 1 SER A 18 O - C - N ANGL. DEV. = -39.5 DEGREES REMARK 500 1 LYS A 19 C - N - CA ANGL. DEV. = 37.6 DEGREES REMARK 500 1 LYS A 19 CB - CA - C ANGL. DEV. = 16.7 DEGREES REMARK 500 1 LYS A 19 N - CA - CB ANGL. DEV. = -23.8 DEGREES REMARK 500 1 LYS A 19 CD - CE - NZ ANGL. DEV. = 41.5 DEGREES REMARK 500 1 LYS A 19 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 1 CYS A 20 O - C - N ANGL. DEV. = -15.8 DEGREES REMARK 500 1 PRO A 21 C - N - CD ANGL. DEV. = -18.0 DEGREES REMARK 500 1 PRO A 21 CA - N - CD ANGL. DEV. = 12.1 DEGREES REMARK 500 1 PRO A 21 CB - CG - CD ANGL. DEV. = 24.6 DEGREES REMARK 500 1 PRO A 21 N - CD - CG ANGL. DEV. = -17.4 DEGREES REMARK 500 1 THR A 22 OG1 - CB - CG2 ANGL. DEV. = -46.6 DEGREES REMARK 500 1 THR A 22 CA - CB - OG1 ANGL. DEV. = 25.4 DEGREES REMARK 500 1 THR A 22 CA - CB - CG2 ANGL. DEV. = 42.6 DEGREES REMARK 500 1 ASP A 26 OD1 - CG - OD2 ANGL. DEV. = -86.1 DEGREES REMARK 500 1 ASP A 26 CB - CG - OD1 ANGL. DEV. = 43.7 DEGREES REMARK 500 1 ASP A 26 CB - CG - OD2 ANGL. DEV. = 42.5 DEGREES REMARK 500 1 THR A 32 CA - CB - CG2 ANGL. DEV. = 12.8 DEGREES REMARK 500 1 HIS A 38 CA - C - O ANGL. DEV. = 56.7 DEGREES REMARK 500 1 HIS A 38 CA - C - N ANGL. DEV. = 57.1 DEGREES REMARK 500 1 HIS A 38 O - C - N ANGL. DEV. = 113.8 DEGREES REMARK 500 1 ARG A 39 C - N - CA ANGL. DEV. = 53.5 DEGREES REMARK 500 1 ARG A 39 CA - CB - CG ANGL. DEV. = 24.1 DEGREES REMARK 500 1 ARG A 39 CB - CG - CD ANGL. DEV. = 40.6 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 148 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 17 -113.15 97.52 REMARK 500 1 PRO A 21 81.69 -52.21 REMARK 500 1 HIS A 30 -167.24 11.51 REMARK 500 1 PRO A 36 46.66 -72.69 REMARK 500 1 HIS A 37 -177.65 89.65 REMARK 500 1 ARG A 39 10.10 -1.92 REMARK 500 1 SER A 40 30.46 -173.82 REMARK 500 1 LEU A 41 -43.86 87.76 REMARK 500 1 SER A 42 -25.78 -35.48 REMARK 500 1 CYS A 44 109.80 48.90 REMARK 500 1 HIS A 46 -83.09 -94.18 REMARK 500 1 LYS A 47 62.14 67.59 REMARK 500 1 ARG A 49 87.27 56.53 REMARK 500 1 VAL A 50 -113.12 142.54 REMARK 500 1 PRO A 51 -139.95 -56.64 REMARK 500 1 PRO A 52 79.13 -62.47 REMARK 500 1 GLU A 53 -103.64 -151.55 REMARK 500 1 LEU A 55 -10.43 -17.71 REMARK 500 1 MET A 57 -163.71 -54.00 REMARK 500 1 LEU A 62 -40.67 57.19 REMARK 500 2 SER A 18 -14.84 85.34 REMARK 500 2 LYS A 19 156.75 57.82 REMARK 500 2 PRO A 21 73.44 -48.56 REMARK 500 2 HIS A 30 -160.90 23.42 REMARK 500 2 PRO A 36 47.11 -70.96 REMARK 500 2 HIS A 37 -179.39 88.47 REMARK 500 2 SER A 40 61.10 175.03 REMARK 500 2 LEU A 41 -161.30 76.93 REMARK 500 2 SER A 42 -2.61 64.57 REMARK 500 2 CYS A 44 105.87 52.90 REMARK 500 2 PRO A 45 34.89 -90.60 REMARK 500 2 HIS A 46 -92.07 -121.12 REMARK 500 2 LYS A 47 67.74 75.25 REMARK 500 2 ASP A 48 18.52 -151.63 REMARK 500 2 ARG A 49 -177.64 50.74 REMARK 500 2 VAL A 50 -85.38 26.72 REMARK 500 2 PRO A 51 168.40 -46.34 REMARK 500 2 PRO A 52 96.35 -49.85 REMARK 500 2 GLU A 53 -102.43 -154.62 REMARK 500 2 ILE A 54 19.09 -147.58 REMARK 500 2 ALA A 56 42.61 -109.67 REMARK 500 2 MET A 57 -80.56 -66.03 REMARK 500 2 HIS A 58 -50.12 173.64 REMARK 500 2 GLU A 59 -40.22 -133.92 REMARK 500 2 ASN A 60 40.01 -93.88 REMARK 500 2 LEU A 62 -80.59 62.52 REMARK 500 3 GLU A 17 113.77 62.05 REMARK 500 3 SER A 18 115.31 63.81 REMARK 500 3 PRO A 21 70.01 -53.09 REMARK 500 3 PRO A 23 -18.75 -46.86 REMARK 500 REMARK 500 THIS ENTRY HAS 405 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 64 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 20 SG REMARK 620 2 CYS A 25 SG 120.6 REMARK 620 3 HIS A 38 NE2 117.1 102.0 REMARK 620 4 CYS A 44 SG 103.3 114.9 96.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 64 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHORS BELIEVE RESIDUE 32 SHOULD BE THR, REMARK 999 NOT ASN. REMARK 999 THE FIRST 15 RESIDUES HAD VERY FEW ASSIGNMENTS REMARK 999 AND NOES AND CONSEQUENTLY THIS REGION IS QUITE REMARK 999 UNSTRUCTURED AND HAS BEEN OMITTED FROM THE REMARK 999 COORDINATES. DBREF 1PXE A 2 63 UNP P70475 MYT1L_RAT 487 548 SEQADV 1PXE MET A 1 UNP P70475 INITIATING METHIONINE SEQADV 1PXE THR A 32 UNP P70475 ASN 517 SEE REMARK 999 SEQRES 1 A 63 MET HIS VAL LYS LYS PRO TYR TYR ASP PRO SER ARG THR SEQRES 2 A 63 GLU LYS ARG GLU SER LYS CYS PRO THR PRO GLY CYS ASP SEQRES 3 A 63 GLY THR GLY HIS VAL THR GLY LEU TYR PRO HIS HIS ARG SEQRES 4 A 63 SER LEU SER GLY CYS PRO HIS LYS ASP ARG VAL PRO PRO SEQRES 5 A 63 GLU ILE LEU ALA MET HIS GLU ASN VAL LEU LYS HET ZN A 64 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ LINK SG CYS A 20 ZN ZN A 64 1555 1555 2.27 LINK SG CYS A 25 ZN ZN A 64 1555 1555 2.27 LINK NE2 HIS A 38 ZN ZN A 64 1555 1555 2.02 LINK SG CYS A 44 ZN ZN A 64 1555 1555 2.30 SITE 1 AC1 5 CYS A 20 CYS A 25 HIS A 38 CYS A 44 SITE 2 AC1 5 GLU A 53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1