HEADER LYASE 09-JUL-03 1PYU TITLE PROCESSED ASPARTATE DECARBOXYLASE MUTANT WITH SER25 MUTATED TO CYS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ASPARTATE 1-DECARBOXYLASE BETA CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: ASPARTATE ALPHA-DECARBOXYLASE; COMPND 5 EC: 4.1.1.11; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ASPARTATE 1-DECARBOXYLASE ALFA CHAIN; COMPND 9 CHAIN: B, D; COMPND 10 SYNONYM: ASPARTATE ALPHA-DECARBOXYLASE; COMPND 11 EC: 4.1.1.11; COMPND 12 ENGINEERED: YES; COMPND 13 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: PAND; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSETA; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 12 ORGANISM_TAXID: 562; SOURCE 13 GENE: PAND; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: C41 DE3; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: PRSETA KEYWDS AUTO-PROCESSING, ASPARTATE DECARBOXYLASE, PYRUVOYL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR F.SCHMITZBERGER,M.L.KILKENNY,C.M.C.LOBLEY,M.E.WEBB,M.VINKOVIC, AUTHOR 2 D.MATAK-VINKOVIC,M.WITTY,D.Y.CHIRGADZE,A.G.SMITH,C.ABELL, AUTHOR 3 T.L.BLUNDELL REVDAT 7 16-AUG-23 1PYU 1 REMARK REVDAT 6 27-OCT-21 1PYU 1 REMARK SEQADV REVDAT 5 13-JUL-11 1PYU 1 VERSN REVDAT 4 24-FEB-09 1PYU 1 VERSN REVDAT 3 09-DEC-03 1PYU 1 REMARK TITLE REVDAT 2 02-DEC-03 1PYU 1 EXPDTA REVDAT 1 18-NOV-03 1PYU 0 JRNL AUTH F.SCHMITZBERGER,M.L.KILKENNY,C.M.C.LOBLEY,M.E.WEBB, JRNL AUTH 2 M.VINKOVIC,D.MATAK-VINKOVIC,M.WITTY,D.Y.CHIRGADZE,A.G.SMITH, JRNL AUTH 3 C.ABELL,T.L.BLUNDELL JRNL TITL STRUCTURAL CONSTRAINTS ON PROTEIN SELF-PROCESSING IN JRNL TITL 2 L-ASPARTATE-ALPHA-DECARBOXYLASE JRNL REF EMBO J. V. 22 6193 2003 JRNL REFN ISSN 0261-4189 JRNL PMID 14633979 JRNL DOI 10.1093/EMBOJ/CDG575 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.M.WILLIAMSON,G.M.BROWN REMARK 1 TITL PURIFICATION AND PROPERTIES OF REMARK 1 TITL 2 L-ASPARTATE-ALPHA-DECARBOXYLASE, AN ENZYME THAT CATALYZES REMARK 1 TITL 3 THE FORMATION OF BETA-ALANINE IN ESCHERICHIA COLI REMARK 1 REF J.BIOL.CHEM. V. 254 8074 1979 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 2 REMARK 1 AUTH M.K.RAMJEE,U.GENSCHEL,C.ABELL,A.G.SMITH REMARK 1 TITL ESCHERICHIA COLI L-ASPARTATE-ALPHA-DECARBOXYLASE: PREPROTEIN REMARK 1 TITL 2 PROCESSING AND OBSERVATION OF REACTION INTERMEDIATES BY REMARK 1 TITL 3 ELECTROSPRAY MASS SPECTROMETRY REMARK 1 REF BIOCHEM.J. V. 323 661 1997 REMARK 1 REFN ISSN 0264-6021 REMARK 1 REFERENCE 3 REMARK 1 AUTH A.ALBERT,V.DHANARAJ,U.GENSCHEL,G.KHAN,M.K.RAMJEE,R.PULIDO, REMARK 1 AUTH 2 B.L.SIBANDA,F.VON DELFT,M.WITTY,T.L.BLUNDELL,A.G.SMITH, REMARK 1 AUTH 3 C.ABELL REMARK 1 TITL CRYSTAL STRUCTURE OF ASPARTATE DECARBOXYLASE AT 2.2A REMARK 1 TITL 2 RESOLUTION PROVIDES EVIDENCE FOR AN ESTER IN PROTEIN REMARK 1 TITL 3 SELF-PROCESSING REMARK 1 REF NAT.STRUCT.BIOL. V. 5 289 1998 REMARK 1 REFN ISSN 1072-8368 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 24733 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1325 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1641 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2340 REMARK 3 BIN FREE R VALUE SET COUNT : NULL REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1777 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 31.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.54000 REMARK 3 B22 (A**2) : 0.54000 REMARK 3 B33 (A**2) : -0.81000 REMARK 3 B12 (A**2) : 0.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.115 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.108 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.290 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1828 ; 0.013 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1654 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2473 ; 1.417 ; 1.924 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3817 ; 1.153 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 231 ; 6.168 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 280 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2061 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 381 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 300 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1919 ; 0.253 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1140 ; 0.087 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 126 ; 0.270 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.199 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 60 ; 0.341 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 26 ; 0.272 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1160 ; 0.636 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1844 ; 1.148 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 668 ; 1.921 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 629 ; 3.029 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 2 REMARK 3 ORIGIN FOR THE GROUP (A): 41.1139 29.5785 11.6082 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.2839 REMARK 3 T33: 0.3621 T12: -0.1135 REMARK 3 T13: -0.0615 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 28.2615 L22: 24.7377 REMARK 3 L33: 12.8485 L12: -4.1519 REMARK 3 L13: 17.3583 L23: 9.1419 REMARK 3 S TENSOR REMARK 3 S11: 0.7885 S12: -0.3773 S13: -1.4861 REMARK 3 S21: -0.5293 S22: -0.5419 S23: 2.4216 REMARK 3 S31: 1.1772 S32: -1.6558 S33: -0.2466 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 16 REMARK 3 ORIGIN FOR THE GROUP (A): 53.5679 46.8158 26.6438 REMARK 3 T TENSOR REMARK 3 T11: 0.1062 T22: 0.0631 REMARK 3 T33: 0.0976 T12: -0.0170 REMARK 3 T13: -0.0131 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 3.3154 L22: 1.7149 REMARK 3 L33: 4.2495 L12: 1.2993 REMARK 3 L13: 3.0026 L23: 2.5352 REMARK 3 S TENSOR REMARK 3 S11: -0.2697 S12: -0.0477 S13: 0.4921 REMARK 3 S21: -0.1892 S22: 0.0390 S23: 0.1791 REMARK 3 S31: -0.4449 S32: 0.1341 S33: 0.2307 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 19 REMARK 3 ORIGIN FOR THE GROUP (A): 67.8625 44.5750 39.7651 REMARK 3 T TENSOR REMARK 3 T11: 0.2501 T22: 0.3921 REMARK 3 T33: 0.2933 T12: 0.0398 REMARK 3 T13: -0.1951 T23: -0.1258 REMARK 3 L TENSOR REMARK 3 L11: -12.9832 L22: 73.0078 REMARK 3 L33: 67.8794 L12: -24.1698 REMARK 3 L13: -41.4979 L23: 25.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.6709 S12: -1.9524 S13: 0.3411 REMARK 3 S21: 3.0370 S22: 1.8727 S23: -3.2573 REMARK 3 S31: 2.5400 S32: 3.2721 S33: -1.2018 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 24 REMARK 3 ORIGIN FOR THE GROUP (A): 69.7464 35.5585 39.8863 REMARK 3 T TENSOR REMARK 3 T11: 0.5385 T22: 0.5618 REMARK 3 T33: 0.4593 T12: 0.1086 REMARK 3 T13: -0.1114 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 80.5465 L22: 80.5669 REMARK 3 L33: 27.7975 L12: 51.5324 REMARK 3 L13: -20.9997 L23: -31.1731 REMARK 3 S TENSOR REMARK 3 S11: 1.2925 S12: -0.9788 S13: -2.8341 REMARK 3 S21: 2.7809 S22: -0.9975 S23: -0.1720 REMARK 3 S31: 0.7836 S32: 0.7718 S33: -0.2949 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 27 REMARK 3 ORIGIN FOR THE GROUP (A): 60.9442 39.3743 35.9897 REMARK 3 T TENSOR REMARK 3 T11: 0.2969 T22: 0.1984 REMARK 3 T33: 0.2330 T12: -0.0491 REMARK 3 T13: -0.0911 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 33.1149 L22: 30.4529 REMARK 3 L33: 40.0215 L12: 2.5782 REMARK 3 L13: -6.1070 L23: 14.0079 REMARK 3 S TENSOR REMARK 3 S11: 0.3551 S12: 0.1928 S13: -0.4610 REMARK 3 S21: 0.0005 S22: 0.1261 S23: -1.8306 REMARK 3 S31: 2.7625 S32: 0.1109 S33: -0.4812 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 28 B 29 REMARK 3 ORIGIN FOR THE GROUP (A): 55.1618 43.7951 38.1029 REMARK 3 T TENSOR REMARK 3 T11: 0.1758 T22: 0.1779 REMARK 3 T33: 0.0333 T12: -0.0157 REMARK 3 T13: -0.0012 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: -9.0581 L22: 3.9465 REMARK 3 L33: -10.3367 L12: 13.0255 REMARK 3 L13: 26.9118 L23: 11.8502 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.0396 S13: 0.0221 REMARK 3 S21: 0.6092 S22: -0.1904 S23: -0.0995 REMARK 3 S31: -0.0667 S32: 0.2718 S33: 0.1566 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 30 B 36 REMARK 3 ORIGIN FOR THE GROUP (A): 49.6184 44.2523 37.2066 REMARK 3 T TENSOR REMARK 3 T11: 0.1259 T22: 0.1421 REMARK 3 T33: 0.0598 T12: -0.0231 REMARK 3 T13: -0.0108 T23: -0.0300 REMARK 3 L TENSOR REMARK 3 L11: 11.6202 L22: 9.5288 REMARK 3 L33: 14.8688 L12: 4.7989 REMARK 3 L13: 9.2232 L23: 3.8770 REMARK 3 S TENSOR REMARK 3 S11: 0.2951 S12: -0.6392 S13: -0.3028 REMARK 3 S21: 0.5651 S22: -0.1585 S23: 0.2650 REMARK 3 S31: 0.0957 S32: -0.3925 S33: -0.1367 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 37 B 68 REMARK 3 ORIGIN FOR THE GROUP (A): 58.1693 42.4788 32.0945 REMARK 3 T TENSOR REMARK 3 T11: 0.0781 T22: 0.1209 REMARK 3 T33: 0.0673 T12: -0.0071 REMARK 3 T13: -0.0249 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 1.4459 L22: 3.1248 REMARK 3 L33: 0.9736 L12: 0.6701 REMARK 3 L13: 0.7290 L23: 1.3122 REMARK 3 S TENSOR REMARK 3 S11: -0.0456 S12: -0.2077 S13: -0.0131 REMARK 3 S21: 0.1642 S22: -0.0077 S23: -0.0712 REMARK 3 S31: 0.0283 S32: 0.1009 S33: 0.0534 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 69 B 72 REMARK 3 ORIGIN FOR THE GROUP (A): 63.0937 43.6263 36.5076 REMARK 3 T TENSOR REMARK 3 T11: 0.1713 T22: 0.1114 REMARK 3 T33: 0.1314 T12: -0.0637 REMARK 3 T13: -0.0598 T23: -0.0762 REMARK 3 L TENSOR REMARK 3 L11: 50.9469 L22: 34.2411 REMARK 3 L33: 26.7308 L12: -30.3000 REMARK 3 L13: -4.8562 L23: 12.1018 REMARK 3 S TENSOR REMARK 3 S11: -0.0551 S12: 0.2617 S13: -0.7388 REMARK 3 S21: 0.2605 S22: 0.6283 S23: -0.4114 REMARK 3 S31: 1.4064 S32: 0.4854 S33: -0.5732 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 73 B 77 REMARK 3 ORIGIN FOR THE GROUP (A): 70.8262 39.8242 32.2879 REMARK 3 T TENSOR REMARK 3 T11: 0.2190 T22: 0.2371 REMARK 3 T33: 0.1389 T12: 0.0527 REMARK 3 T13: -0.0879 T23: -0.0780 REMARK 3 L TENSOR REMARK 3 L11: 19.1423 L22: 45.0131 REMARK 3 L33: -8.2360 L12: 1.2314 REMARK 3 L13: -6.0327 L23: -7.5540 REMARK 3 S TENSOR REMARK 3 S11: -0.6384 S12: -0.1526 S13: -0.6354 REMARK 3 S21: 1.1496 S22: 0.5088 S23: -0.3891 REMARK 3 S31: -0.4902 S32: -0.0172 S33: 0.1296 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 78 B 116 REMARK 3 ORIGIN FOR THE GROUP (A): 50.3370 46.9013 26.7822 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.1272 REMARK 3 T33: 0.0997 T12: 0.0005 REMARK 3 T13: -0.0280 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 2.7192 L22: 2.6257 REMARK 3 L33: 4.8212 L12: 2.4808 REMARK 3 L13: 3.2796 L23: 3.0891 REMARK 3 S TENSOR REMARK 3 S11: -0.1090 S12: -0.2878 S13: 0.3441 REMARK 3 S21: -0.1081 S22: -0.2152 S23: 0.3068 REMARK 3 S31: -0.2688 S32: -0.4323 S33: 0.3241 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 16 REMARK 3 ORIGIN FOR THE GROUP (A): 55.4099 39.1200 5.5439 REMARK 3 T TENSOR REMARK 3 T11: 0.0686 T22: 0.1044 REMARK 3 T33: 0.0538 T12: 0.0004 REMARK 3 T13: -0.0136 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 3.5629 L22: 8.2533 REMARK 3 L33: 2.3360 L12: 2.4411 REMARK 3 L13: 0.0604 L23: 0.2934 REMARK 3 S TENSOR REMARK 3 S11: -0.2144 S12: 0.2687 S13: 0.1337 REMARK 3 S21: -0.7453 S22: 0.0648 S23: -0.4584 REMARK 3 S31: -0.1234 S32: 0.0586 S33: 0.1497 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 17 C 24 REMARK 3 ORIGIN FOR THE GROUP (A): 59.0083 58.7457 18.8702 REMARK 3 T TENSOR REMARK 3 T11: 0.5750 T22: 0.4966 REMARK 3 T33: 0.6355 T12: -0.0219 REMARK 3 T13: -0.0881 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 8.9798 L22: -3.4731 REMARK 3 L33: 50.4114 L12: 6.4925 REMARK 3 L13: -18.7699 L23: 1.4647 REMARK 3 S TENSOR REMARK 3 S11: 0.2891 S12: -1.6298 S13: 0.9120 REMARK 3 S21: 0.0578 S22: -0.1772 S23: -0.1559 REMARK 3 S31: -3.0164 S32: 2.9967 S33: -0.1119 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 25 D 27 REMARK 3 ORIGIN FOR THE GROUP (A): 54.1810 51.8386 14.4354 REMARK 3 T TENSOR REMARK 3 T11: 0.3133 T22: 0.2234 REMARK 3 T33: 0.3856 T12: 0.0067 REMARK 3 T13: 0.0897 T23: 0.0360 REMARK 3 L TENSOR REMARK 3 L11: 36.9622 L22: 74.6461 REMARK 3 L33: -32.0220 L12: -9.9642 REMARK 3 L13: 20.3432 L23: -24.9846 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: -0.6359 S13: -1.1985 REMARK 3 S21: 2.7163 S22: 0.2923 S23: 0.7281 REMARK 3 S31: -1.6559 S32: -0.0524 S33: -0.3924 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 28 D 29 REMARK 3 ORIGIN FOR THE GROUP (A): 50.8180 52.3193 7.6514 REMARK 3 T TENSOR REMARK 3 T11: 0.2486 T22: 0.0542 REMARK 3 T33: 0.3167 T12: 0.0093 REMARK 3 T13: 0.0332 T23: 0.1082 REMARK 3 L TENSOR REMARK 3 L11: 15.3910 L22: 1.5454 REMARK 3 L33: -4.6522 L12: 3.0305 REMARK 3 L13: -6.5530 L23: 19.7110 REMARK 3 S TENSOR REMARK 3 S11: -0.3187 S12: -0.0658 S13: 0.1015 REMARK 3 S21: 0.1182 S22: 0.3250 S23: 0.7711 REMARK 3 S31: 0.2396 S32: 0.0016 S33: -0.0063 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 30 D 36 REMARK 3 ORIGIN FOR THE GROUP (A): 47.2224 49.3401 4.4511 REMARK 3 T TENSOR REMARK 3 T11: 0.1871 T22: 0.1161 REMARK 3 T33: 0.2539 T12: 0.0201 REMARK 3 T13: -0.0272 T23: 0.1250 REMARK 3 L TENSOR REMARK 3 L11: 6.4944 L22: 23.6278 REMARK 3 L33: 8.1044 L12: 0.3111 REMARK 3 L13: 1.3748 L23: 3.7641 REMARK 3 S TENSOR REMARK 3 S11: -0.1049 S12: 0.5246 S13: 1.1309 REMARK 3 S21: 0.1227 S22: -0.2230 S23: 0.7577 REMARK 3 S31: -0.4489 S32: -0.2125 S33: 0.3279 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 37 D 68 REMARK 3 ORIGIN FOR THE GROUP (A): 55.2821 48.2336 10.3176 REMARK 3 T TENSOR REMARK 3 T11: 0.1782 T22: 0.0666 REMARK 3 T33: 0.1592 T12: -0.0166 REMARK 3 T13: -0.0095 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 6.3606 L22: 1.0171 REMARK 3 L33: 2.7310 L12: 0.9782 REMARK 3 L13: -1.1928 L23: 0.1358 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: 0.1298 S13: 0.7662 REMARK 3 S21: -0.1975 S22: 0.0314 S23: 0.0136 REMARK 3 S31: -0.4274 S32: -0.0160 S33: -0.0736 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 69 D 72 REMARK 3 ORIGIN FOR THE GROUP (A): 57.3915 54.2093 11.8317 REMARK 3 T TENSOR REMARK 3 T11: 0.3215 T22: 0.1783 REMARK 3 T33: 0.3243 T12: -0.0169 REMARK 3 T13: 0.0488 T23: 0.0915 REMARK 3 L TENSOR REMARK 3 L11: 19.4673 L22: 21.8580 REMARK 3 L33: 13.6704 L12: -8.6035 REMARK 3 L13: 14.1807 L23: -4.2164 REMARK 3 S TENSOR REMARK 3 S11: -0.1377 S12: -1.0063 S13: 0.3484 REMARK 3 S21: 1.2906 S22: 0.8569 S23: -0.1033 REMARK 3 S31: -0.0502 S32: -0.2752 S33: -0.7192 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 73 D 77 REMARK 3 ORIGIN FOR THE GROUP (A): 63.3926 52.8698 19.1722 REMARK 3 T TENSOR REMARK 3 T11: 0.3760 T22: 0.1338 REMARK 3 T33: 0.2174 T12: -0.0809 REMARK 3 T13: 0.0117 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 21.6467 L22: 3.1102 REMARK 3 L33: 31.5372 L12: 6.8252 REMARK 3 L13: -6.6062 L23: 6.4204 REMARK 3 S TENSOR REMARK 3 S11: 1.1484 S12: -0.1885 S13: 0.7084 REMARK 3 S21: -0.1931 S22: -0.6042 S23: 0.0930 REMARK 3 S31: -0.5593 S32: -0.8149 S33: -0.5442 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 78 D 115 REMARK 3 ORIGIN FOR THE GROUP (A): 54.1656 40.9624 3.0460 REMARK 3 T TENSOR REMARK 3 T11: 0.1643 T22: 0.1702 REMARK 3 T33: 0.1092 T12: 0.0131 REMARK 3 T13: 0.0030 T23: 0.0500 REMARK 3 L TENSOR REMARK 3 L11: 3.8286 L22: 7.6002 REMARK 3 L33: 1.7164 L12: 3.8430 REMARK 3 L13: 0.4791 L23: 0.6063 REMARK 3 S TENSOR REMARK 3 S11: -0.2252 S12: 0.5491 S13: 0.3298 REMARK 3 S21: -0.7006 S22: 0.2506 S23: 0.1624 REMARK 3 S31: -0.3439 S32: 0.0459 S33: -0.0254 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1PYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000019705. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-MAR-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIUM MIRRORS REMARK 200 OPTICS : OSMIC CONFOCAL MAXFLUX OPTIC REMARK 200 SYSTEM REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25322 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08200 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 28.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.32300 REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.011 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 1AW8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITRIC ACID, 1.6M AMMONIUM REMARK 280 SULPHATE, PH 4.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.37367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 144.74733 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.56050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 180.93417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 36.18683 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.37367 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 144.74733 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 180.93417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 108.56050 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.18683 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE BIOLOGICAL ASSEMBLY IS A TETRAMER GENERATED FROM THE REMARK 300 DIMER IN THE ASYMMETRIC UNIT BY THE SYMMETRY OPERATION X, X-Y, 1/6- REMARK 300 Z. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 22950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -219.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 36.18683 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -16 REMARK 465 ARG A -15 REMARK 465 GLY A -14 REMARK 465 SER A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLY A -6 REMARK 465 LEU A -5 REMARK 465 VAL A -4 REMARK 465 THR B 117 REMARK 465 ALA B 118 REMARK 465 LYS B 119 REMARK 465 ALA B 120 REMARK 465 ILE B 121 REMARK 465 PRO B 122 REMARK 465 VAL B 123 REMARK 465 GLN B 124 REMARK 465 VAL B 125 REMARK 465 ALA B 126 REMARK 465 MET C -16 REMARK 465 ARG C -15 REMARK 465 GLY C -14 REMARK 465 SER C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 GLY C -6 REMARK 465 LEU C -5 REMARK 465 VAL C -4 REMARK 465 PRO C -3 REMARK 465 ARG C -2 REMARK 465 GLY C -1 REMARK 465 SER C 0 REMARK 465 ARG D 116 REMARK 465 THR D 117 REMARK 465 ALA D 118 REMARK 465 LYS D 119 REMARK 465 ALA D 120 REMARK 465 ILE D 121 REMARK 465 PRO D 122 REMARK 465 VAL D 123 REMARK 465 GLN D 124 REMARK 465 VAL D 125 REMARK 465 ALA D 126 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A -2 CG CD NE CZ NH1 NH2 REMARK 470 SER A 0 OG REMARK 470 ASP A 19 CB CG OD1 OD2 REMARK 470 HIS A 21 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 63 CG CD OE1 OE2 REMARK 470 ARG B 116 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 14 CG CD CE NZ REMARK 470 ASP C 19 CB CG OD1 OD2 REMARK 470 GLU D 96 CG CD OE1 OE2 REMARK 470 GLU D 113 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 265 O HOH D 205 1.63 REMARK 500 O HOH D 217 O HOH D 270 1.72 REMARK 500 O HOH B 266 O HOH D 206 1.76 REMARK 500 O HOH B 266 O HOH D 269 1.97 REMARK 500 O GLY A -1 OE1 GLU D 97 2.12 REMARK 500 O HOH D 216 O HOH D 265 2.18 REMARK 500 O ASN B 72 O2 SO4 B 202 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 262 O HOH D 215 12555 1.88 REMARK 500 O HOH B 214 O HOH D 270 6655 2.08 REMARK 500 O HOH B 262 O HOH D 210 12555 2.13 REMARK 500 O HOH A 38 O HOH B 232 5564 2.13 REMARK 500 O HOH B 275 O HOH C 26 12555 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 29 125.40 -38.47 REMARK 500 THR B 57 -148.60 -152.12 REMARK 500 ARG C 12 60.68 62.74 REMARK 500 ASP D 29 122.78 -39.02 REMARK 500 THR D 57 -151.47 -151.38 REMARK 500 ASP D 111 79.50 -103.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1AW8 RELATED DB: PDB REMARK 900 PYRUVOYL-DEPENDENT ASPARTATE DECARBOXYLASE REMARK 900 RELATED ID: 1PPY RELATED DB: PDB REMARK 900 RELATED ID: 1PQF RELATED DB: PDB REMARK 900 RELATED ID: 1PQE RELATED DB: PDB REMARK 900 RELATED ID: 1PQH RELATED DB: PDB REMARK 900 RELATED ID: 1PT0 RELATED DB: PDB REMARK 900 RELATED ID: 1PT1 RELATED DB: PDB REMARK 900 RELATED ID: 1PYQ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHOR STATES THAT THIS PARTICULR PROTEIN REMARK 999 SELF-PROCESSES IN ORDER TO BECOME CATALYTICALLY REMARK 999 ACTIVE FORMING TWO SEPARATE CLEAVED CHAINS A,C REMARK 999 AND B,D. HOWEVER, THE TWO CLEAVED CHAINS REMAIN REMARK 999 ASSOCIATED IN THE SUBUNIT. DBREF 1PYU A 1 24 UNP P0A790 PAND_ECOLI 1 24 DBREF 1PYU B 25 126 UNP P0A790 PAND_ECOLI 25 126 DBREF 1PYU C 1 24 UNP P0A790 PAND_ECOLI 1 24 DBREF 1PYU D 25 126 UNP P0A790 PAND_ECOLI 25 126 SEQADV 1PYU MET A -16 UNP P0A790 EXPRESSION TAG SEQADV 1PYU ARG A -15 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY A -14 UNP P0A790 EXPRESSION TAG SEQADV 1PYU SER A -13 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -12 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -11 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -10 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -9 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -8 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS A -7 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY A -6 UNP P0A790 EXPRESSION TAG SEQADV 1PYU LEU A -5 UNP P0A790 EXPRESSION TAG SEQADV 1PYU VAL A -4 UNP P0A790 EXPRESSION TAG SEQADV 1PYU PRO A -3 UNP P0A790 EXPRESSION TAG SEQADV 1PYU ARG A -2 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY A -1 UNP P0A790 EXPRESSION TAG SEQADV 1PYU SER A 0 UNP P0A790 EXPRESSION TAG SEQADV 1PYU CYS B 25 UNP P0A790 SER 25 ENGINEERED MUTATION SEQADV 1PYU MET C -16 UNP P0A790 EXPRESSION TAG SEQADV 1PYU ARG C -15 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY C -14 UNP P0A790 EXPRESSION TAG SEQADV 1PYU SER C -13 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -12 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -11 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -10 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -9 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -8 UNP P0A790 EXPRESSION TAG SEQADV 1PYU HIS C -7 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY C -6 UNP P0A790 EXPRESSION TAG SEQADV 1PYU LEU C -5 UNP P0A790 EXPRESSION TAG SEQADV 1PYU VAL C -4 UNP P0A790 EXPRESSION TAG SEQADV 1PYU PRO C -3 UNP P0A790 EXPRESSION TAG SEQADV 1PYU ARG C -2 UNP P0A790 EXPRESSION TAG SEQADV 1PYU GLY C -1 UNP P0A790 EXPRESSION TAG SEQADV 1PYU SER C 0 UNP P0A790 EXPRESSION TAG SEQADV 1PYU CYS D 25 UNP P0A790 SER 25 ENGINEERED MUTATION SEQRES 1 A 41 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY LEU VAL SEQRES 2 A 41 PRO ARG GLY SER MET ILE ARG THR MET LEU GLN GLY LYS SEQRES 3 A 41 LEU HIS ARG VAL LYS VAL THR HIS ALA ASP LEU HIS TYR SEQRES 4 A 41 GLU GLY SEQRES 1 B 102 CYS CYS ALA ILE ASP GLN ASP PHE LEU ASP ALA ALA GLY SEQRES 2 B 102 ILE LEU GLU ASN GLU ALA ILE ASP ILE TRP ASN VAL THR SEQRES 3 B 102 ASN GLY LYS ARG PHE SER THR TYR ALA ILE ALA ALA GLU SEQRES 4 B 102 ARG GLY SER ARG ILE ILE SER VAL ASN GLY ALA ALA ALA SEQRES 5 B 102 HIS CYS ALA SER VAL GLY ASP ILE VAL ILE ILE ALA SER SEQRES 6 B 102 PHE VAL THR MET PRO ASP GLU GLU ALA ARG THR TRP ARG SEQRES 7 B 102 PRO ASN VAL ALA TYR PHE GLU GLY ASP ASN GLU MET LYS SEQRES 8 B 102 ARG THR ALA LYS ALA ILE PRO VAL GLN VAL ALA SEQRES 1 C 41 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY LEU VAL SEQRES 2 C 41 PRO ARG GLY SER MET ILE ARG THR MET LEU GLN GLY LYS SEQRES 3 C 41 LEU HIS ARG VAL LYS VAL THR HIS ALA ASP LEU HIS TYR SEQRES 4 C 41 GLU GLY SEQRES 1 D 102 CYS CYS ALA ILE ASP GLN ASP PHE LEU ASP ALA ALA GLY SEQRES 2 D 102 ILE LEU GLU ASN GLU ALA ILE ASP ILE TRP ASN VAL THR SEQRES 3 D 102 ASN GLY LYS ARG PHE SER THR TYR ALA ILE ALA ALA GLU SEQRES 4 D 102 ARG GLY SER ARG ILE ILE SER VAL ASN GLY ALA ALA ALA SEQRES 5 D 102 HIS CYS ALA SER VAL GLY ASP ILE VAL ILE ILE ALA SER SEQRES 6 D 102 PHE VAL THR MET PRO ASP GLU GLU ALA ARG THR TRP ARG SEQRES 7 D 102 PRO ASN VAL ALA TYR PHE GLU GLY ASP ASN GLU MET LYS SEQRES 8 D 102 ARG THR ALA LYS ALA ILE PRO VAL GLN VAL ALA HET SO4 B 202 5 HET SO4 D 201 5 HETNAM SO4 SULFATE ION FORMUL 5 SO4 2(O4 S 2-) FORMUL 7 HOH *180(H2 O) HELIX 1 1 GLN B 30 GLY B 37 1 8 HELIX 2 2 ALA B 74 CYS B 78 5 5 HELIX 3 3 ASP B 95 TRP B 101 1 7 HELIX 4 4 GLN D 30 GLY D 37 1 8 HELIX 5 5 ALA D 74 CYS D 78 5 5 HELIX 6 6 ASP D 95 ARG D 99 1 5 SHEET 1 A13 HIS A 17 ASP A 19 0 SHEET 2 A13 ILE B 69 ASN B 72 1 O VAL B 71 N HIS A 17 SHEET 3 A13 CYS B 26 ASP B 29 -1 N ALA B 27 O SER B 70 SHEET 4 A13 ARG B 54 ALA B 62 1 O ILE B 60 N ILE B 28 SHEET 5 A13 ALA B 43 ASN B 48 -1 N ILE B 46 O PHE B 55 SHEET 6 A13 ILE B 84 PRO B 94 -1 O ALA B 88 N ASP B 45 SHEET 7 A13 ILE A 2 LYS A 14 -1 N MET A 5 O VAL B 91 SHEET 8 A13 ILE D 84 PRO D 94 -1 O THR D 92 N ILE A 2 SHEET 9 A13 ALA D 43 ASN D 48 -1 N ASP D 45 O ALA D 88 SHEET 10 A13 ARG D 54 ALA D 62 -1 O PHE D 55 N ILE D 46 SHEET 11 A13 CYS D 26 ASP D 29 1 N ILE D 28 O ALA D 62 SHEET 12 A13 ILE D 69 ASN D 72 -1 O SER D 70 N ALA D 27 SHEET 13 A13 HIS C 17 ASP C 19 1 N HIS C 17 O VAL D 71 SHEET 1 B 7 GLU B 113 MET B 114 0 SHEET 2 B 7 ASN B 104 GLU B 109 -1 N GLU B 109 O GLU B 113 SHEET 3 B 7 ILE A 2 LYS A 14 1 N HIS A 11 O ALA B 106 SHEET 4 B 7 ILE D 84 PRO D 94 -1 O THR D 92 N ILE A 2 SHEET 5 B 7 ILE C 2 LYS C 14 -1 N MET C 5 O VAL D 91 SHEET 6 B 7 ASN D 104 GLU D 109 1 O ALA D 106 N HIS C 11 SHEET 7 B 7 GLU D 113 MET D 114 -1 O GLU D 113 N GLU D 109 SITE 1 AC1 10 TRP B 47 ARG B 54 ILE B 86 CYS D 25 SITE 2 AC1 10 THR D 57 ASN D 72 GLY D 73 ALA D 74 SITE 3 AC1 10 ALA D 75 HOH D 233 SITE 1 AC2 8 CYS B 25 THR B 57 ASN B 72 ALA B 74 SITE 2 AC2 8 ALA B 75 TRP D 47 ARG D 54 ILE D 86 CRYST1 70.787 70.787 217.121 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014127 0.008156 0.000000 0.00000 SCALE2 0.000000 0.016312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004606 0.00000