HEADER HYDROLASE 18-JUL-03 1Q17 TITLE STRUCTURE OF THE YEAST HST2 PROTEIN DEACETYLASE IN TERNARY COMPLEX TITLE 2 WITH 2'-O-ACETYL ADP RIBOSE AND HISTONE PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HST2 PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: PROTEIN DEACETYLASE; COMPND 5 SYNONYM: HOMOLOGOUS TO SIR2 PROTEIN 2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: HST2 OR YPL015C OR LPA2C; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HISTONE DEACETYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.ZHAO,X.CHAI,R.MARMORSTEIN REVDAT 4 16-AUG-23 1Q17 1 REMARK SEQADV REVDAT 3 16-NOV-11 1Q17 1 VERSN HETATM REVDAT 2 24-FEB-09 1Q17 1 VERSN REVDAT 1 18-NOV-03 1Q17 0 JRNL AUTH K.ZHAO,X.CHAI,R.MARMORSTEIN JRNL TITL STRUCTURE OF THE YEAST HST2 PROTEIN DEACETYLASE IN TERNARY JRNL TITL 2 COMPLEX WITH 2'-O-ACETYL ADP RIBOSE AND HISTONE PEPTIDE. JRNL REF STRUCTURE V. 11 1403 2003 JRNL REFN ISSN 0969-2126 JRNL PMID 14604530 JRNL DOI 10.1016/J.STR.2003.09.016 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.ZHAO,X.CHAI,A.CLEMENTS,R.MARMORSTEIN REMARK 1 TITL STRUCTURE AND AUTOREGULATION OF THE YEAST HST2 HOMOLOG OF REMARK 1 TITL 2 SIR2 REMARK 1 REF NAT.STRUCT.BIOL. V. 10 864 2003 REMARK 1 REFN ISSN 1072-8368 REMARK 1 DOI 10.1038/NSB978 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 243397.010 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 34976 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3489 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.004 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5086 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE : 0.3390 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 554 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.014 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6984 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 115 REMARK 3 SOLVENT ATOMS : 162 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.97000 REMARK 3 B22 (A**2) : 5.01000 REMARK 3 B33 (A**2) : -2.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 8.27000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.40 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.46 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.50 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.950 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 3.750 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 5.630 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.230 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 8.570 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 36.39 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : ADR_M REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Q17 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-JUL-03. REMARK 100 THE DEPOSITION ID IS D_1000019787. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : 0.9 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34976 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.20700 REMARK 200 R SYM FOR SHELL (I) : 0.20700 REMARK 200 FOR SHELL : 10.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 1Q14 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (NH4)2SO4, PH 8.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 73.07950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.84100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 73.07950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.84100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -95.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1507 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 THR A 208 REMARK 465 THR A 209 REMARK 465 SER A 210 REMARK 465 GLY A 211 REMARK 465 LYS A 212 REMARK 465 HIS A 213 REMARK 465 PRO A 214 REMARK 465 GLN A 215 REMARK 465 THR B 208 REMARK 465 THR B 209 REMARK 465 SER B 210 REMARK 465 GLY B 211 REMARK 465 LYS B 212 REMARK 465 HIS B 213 REMARK 465 HIS C -5 REMARK 465 THR C 208 REMARK 465 THR C 209 REMARK 465 SER C 210 REMARK 465 GLY C 211 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 1048 O HOH C 1058 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 217 C - N - CA ANGL. DEV. = 11.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 4 -15.65 -152.20 REMARK 500 ASP A 75 81.09 -176.99 REMARK 500 HIS A 162 -78.75 -65.78 REMARK 500 ILE A 164 100.77 -45.71 REMARK 500 LYS A 165 -105.19 -62.38 REMARK 500 ALA A 180 40.66 -70.08 REMARK 500 PHE A 192 -70.66 -60.94 REMARK 500 LYS A 206 38.55 -93.04 REMARK 500 PRO A 217 163.01 -45.79 REMARK 500 ALA A 257 -74.98 -86.04 REMARK 500 ASN A 258 68.93 -103.77 REMARK 500 ALA A 293 -71.16 -42.22 REMARK 500 HIS B -4 43.41 -160.26 REMARK 500 ASN B 24 -31.37 82.18 REMARK 500 ILE B 35 9.40 -69.21 REMARK 500 ASN B 54 43.29 -143.24 REMARK 500 ASP B 75 96.25 -171.58 REMARK 500 LYS B 84 -73.24 -51.50 REMARK 500 THR B 119 16.58 54.08 REMARK 500 SER B 137 -166.38 -171.41 REMARK 500 GLN B 153 -51.64 -25.23 REMARK 500 ALA B 160 -71.80 -45.25 REMARK 500 HIS B 162 -77.88 -52.95 REMARK 500 PRO B 163 95.07 -52.50 REMARK 500 ILE B 164 88.32 -64.05 REMARK 500 LYS B 165 -146.74 -58.88 REMARK 500 VAL B 172 -16.24 -175.05 REMARK 500 CYS B 173 -11.26 -145.39 REMARK 500 ALA B 180 43.70 -72.56 REMARK 500 THR C 5 42.87 -96.27 REMARK 500 ASN C 22 48.39 -140.25 REMARK 500 ASN C 24 -7.79 77.67 REMARK 500 LYS C 59 71.28 40.90 REMARK 500 GLU C 64 3.42 -68.27 REMARK 500 ASP C 75 91.03 -165.43 REMARK 500 GLU C 161 115.80 -38.37 REMARK 500 HIS C 162 -75.06 -41.69 REMARK 500 ILE C 164 107.08 -58.22 REMARK 500 ASP C 166 80.98 50.89 REMARK 500 CYS C 173 -13.10 -156.07 REMARK 500 ALA C 180 33.21 -64.69 REMARK 500 PRO C 217 -159.53 -61.27 REMARK 500 LEU C 218 133.60 -179.78 REMARK 500 ALA C 257 -95.75 -64.57 REMARK 500 ALA C 293 40.50 -72.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 143 SG REMARK 620 2 CYS A 146 SG 114.1 REMARK 620 3 CYS A 170 SG 97.3 106.3 REMARK 620 4 CYS A 173 SG 89.5 128.9 115.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 143 SG REMARK 620 2 CYS B 146 SG 122.7 REMARK 620 3 CYS B 170 SG 86.5 124.1 REMARK 620 4 CYS B 173 SG 85.0 130.0 95.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 143 SG REMARK 620 2 CYS C 146 SG 121.0 REMARK 620 3 CYS C 170 SG 93.0 104.6 REMARK 620 4 CYS C 173 SG 86.9 134.5 109.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE APR C 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q14 RELATED DB: PDB REMARK 900 THE FULL LENGTH APO STRUCTURE DBREF 1Q17 A 1 294 UNP P53686 HST2_YEAST 1 294 DBREF 1Q17 B 1 294 UNP P53686 HST2_YEAST 1 294 DBREF 1Q17 C 1 294 UNP P53686 HST2_YEAST 1 294 SEQADV 1Q17 HIS A -5 UNP P53686 EXPRESSION TAG SEQADV 1Q17 HIS A -4 UNP P53686 EXPRESSION TAG SEQADV 1Q17 GLY A -3 UNP P53686 EXPRESSION TAG SEQADV 1Q17 MET A -2 UNP P53686 EXPRESSION TAG SEQADV 1Q17 ALA A -1 UNP P53686 EXPRESSION TAG SEQADV 1Q17 SER A 0 UNP P53686 EXPRESSION TAG SEQADV 1Q17 HIS B -5 UNP P53686 EXPRESSION TAG SEQADV 1Q17 HIS B -4 UNP P53686 EXPRESSION TAG SEQADV 1Q17 GLY B -3 UNP P53686 EXPRESSION TAG SEQADV 1Q17 MET B -2 UNP P53686 EXPRESSION TAG SEQADV 1Q17 ALA B -1 UNP P53686 EXPRESSION TAG SEQADV 1Q17 SER B 0 UNP P53686 EXPRESSION TAG SEQADV 1Q17 HIS C -5 UNP P53686 EXPRESSION TAG SEQADV 1Q17 HIS C -4 UNP P53686 EXPRESSION TAG SEQADV 1Q17 GLY C -3 UNP P53686 EXPRESSION TAG SEQADV 1Q17 MET C -2 UNP P53686 EXPRESSION TAG SEQADV 1Q17 ALA C -1 UNP P53686 EXPRESSION TAG SEQADV 1Q17 SER C 0 UNP P53686 EXPRESSION TAG SEQRES 1 A 300 HIS HIS GLY MET ALA SER MET SER VAL SER THR ALA SER SEQRES 2 A 300 THR GLU MET SER VAL ARG LYS ILE ALA ALA HIS MET LYS SEQRES 3 A 300 SER ASN PRO ASN ALA LYS VAL ILE PHE MET VAL GLY ALA SEQRES 4 A 300 GLY ILE SER THR SER CYS GLY ILE PRO ASP PHE ARG SER SEQRES 5 A 300 PRO GLY THR GLY LEU TYR HIS ASN LEU ALA ARG LEU LYS SEQRES 6 A 300 LEU PRO TYR PRO GLU ALA VAL PHE ASP VAL ASP PHE PHE SEQRES 7 A 300 GLN SER ASP PRO LEU PRO PHE TYR THR LEU ALA LYS GLU SEQRES 8 A 300 LEU TYR PRO GLY ASN PHE ARG PRO SER LYS PHE HIS TYR SEQRES 9 A 300 LEU LEU LYS LEU PHE GLN ASP LYS ASP VAL LEU LYS ARG SEQRES 10 A 300 VAL TYR THR GLN ASN ILE ASP THR LEU GLU ARG GLN ALA SEQRES 11 A 300 GLY VAL LYS ASP ASP LEU ILE ILE GLU ALA HIS GLY SER SEQRES 12 A 300 PHE ALA HIS CYS HIS CYS ILE GLY CYS GLY LYS VAL TYR SEQRES 13 A 300 PRO PRO GLN VAL PHE LYS SER LYS LEU ALA GLU HIS PRO SEQRES 14 A 300 ILE LYS ASP PHE VAL LYS CYS ASP VAL CYS GLY GLU LEU SEQRES 15 A 300 VAL LYS PRO ALA ILE VAL PHE PHE GLY GLU ASP LEU PRO SEQRES 16 A 300 ASP SER PHE SER GLU THR TRP LEU ASN ASP SER GLU TRP SEQRES 17 A 300 LEU ARG GLU LYS ILE THR THR SER GLY LYS HIS PRO GLN SEQRES 18 A 300 GLN PRO LEU VAL ILE VAL VAL GLY THR SER LEU ALA VAL SEQRES 19 A 300 TYR PRO PHE ALA SER LEU PRO GLU GLU ILE PRO ARG LYS SEQRES 20 A 300 VAL LYS ARG VAL LEU CYS ASN LEU GLU THR VAL GLY ASP SEQRES 21 A 300 PHE LYS ALA ASN LYS ARG PRO THR ASP LEU ILE VAL HIS SEQRES 22 A 300 GLN TYR SER ASP GLU PHE ALA GLU GLN LEU VAL GLU GLU SEQRES 23 A 300 LEU GLY TRP GLN GLU ASP PHE GLU LYS ILE LEU THR ALA SEQRES 24 A 300 GLN SEQRES 1 B 300 HIS HIS GLY MET ALA SER MET SER VAL SER THR ALA SER SEQRES 2 B 300 THR GLU MET SER VAL ARG LYS ILE ALA ALA HIS MET LYS SEQRES 3 B 300 SER ASN PRO ASN ALA LYS VAL ILE PHE MET VAL GLY ALA SEQRES 4 B 300 GLY ILE SER THR SER CYS GLY ILE PRO ASP PHE ARG SER SEQRES 5 B 300 PRO GLY THR GLY LEU TYR HIS ASN LEU ALA ARG LEU LYS SEQRES 6 B 300 LEU PRO TYR PRO GLU ALA VAL PHE ASP VAL ASP PHE PHE SEQRES 7 B 300 GLN SER ASP PRO LEU PRO PHE TYR THR LEU ALA LYS GLU SEQRES 8 B 300 LEU TYR PRO GLY ASN PHE ARG PRO SER LYS PHE HIS TYR SEQRES 9 B 300 LEU LEU LYS LEU PHE GLN ASP LYS ASP VAL LEU LYS ARG SEQRES 10 B 300 VAL TYR THR GLN ASN ILE ASP THR LEU GLU ARG GLN ALA SEQRES 11 B 300 GLY VAL LYS ASP ASP LEU ILE ILE GLU ALA HIS GLY SER SEQRES 12 B 300 PHE ALA HIS CYS HIS CYS ILE GLY CYS GLY LYS VAL TYR SEQRES 13 B 300 PRO PRO GLN VAL PHE LYS SER LYS LEU ALA GLU HIS PRO SEQRES 14 B 300 ILE LYS ASP PHE VAL LYS CYS ASP VAL CYS GLY GLU LEU SEQRES 15 B 300 VAL LYS PRO ALA ILE VAL PHE PHE GLY GLU ASP LEU PRO SEQRES 16 B 300 ASP SER PHE SER GLU THR TRP LEU ASN ASP SER GLU TRP SEQRES 17 B 300 LEU ARG GLU LYS ILE THR THR SER GLY LYS HIS PRO GLN SEQRES 18 B 300 GLN PRO LEU VAL ILE VAL VAL GLY THR SER LEU ALA VAL SEQRES 19 B 300 TYR PRO PHE ALA SER LEU PRO GLU GLU ILE PRO ARG LYS SEQRES 20 B 300 VAL LYS ARG VAL LEU CYS ASN LEU GLU THR VAL GLY ASP SEQRES 21 B 300 PHE LYS ALA ASN LYS ARG PRO THR ASP LEU ILE VAL HIS SEQRES 22 B 300 GLN TYR SER ASP GLU PHE ALA GLU GLN LEU VAL GLU GLU SEQRES 23 B 300 LEU GLY TRP GLN GLU ASP PHE GLU LYS ILE LEU THR ALA SEQRES 24 B 300 GLN SEQRES 1 C 300 HIS HIS GLY MET ALA SER MET SER VAL SER THR ALA SER SEQRES 2 C 300 THR GLU MET SER VAL ARG LYS ILE ALA ALA HIS MET LYS SEQRES 3 C 300 SER ASN PRO ASN ALA LYS VAL ILE PHE MET VAL GLY ALA SEQRES 4 C 300 GLY ILE SER THR SER CYS GLY ILE PRO ASP PHE ARG SER SEQRES 5 C 300 PRO GLY THR GLY LEU TYR HIS ASN LEU ALA ARG LEU LYS SEQRES 6 C 300 LEU PRO TYR PRO GLU ALA VAL PHE ASP VAL ASP PHE PHE SEQRES 7 C 300 GLN SER ASP PRO LEU PRO PHE TYR THR LEU ALA LYS GLU SEQRES 8 C 300 LEU TYR PRO GLY ASN PHE ARG PRO SER LYS PHE HIS TYR SEQRES 9 C 300 LEU LEU LYS LEU PHE GLN ASP LYS ASP VAL LEU LYS ARG SEQRES 10 C 300 VAL TYR THR GLN ASN ILE ASP THR LEU GLU ARG GLN ALA SEQRES 11 C 300 GLY VAL LYS ASP ASP LEU ILE ILE GLU ALA HIS GLY SER SEQRES 12 C 300 PHE ALA HIS CYS HIS CYS ILE GLY CYS GLY LYS VAL TYR SEQRES 13 C 300 PRO PRO GLN VAL PHE LYS SER LYS LEU ALA GLU HIS PRO SEQRES 14 C 300 ILE LYS ASP PHE VAL LYS CYS ASP VAL CYS GLY GLU LEU SEQRES 15 C 300 VAL LYS PRO ALA ILE VAL PHE PHE GLY GLU ASP LEU PRO SEQRES 16 C 300 ASP SER PHE SER GLU THR TRP LEU ASN ASP SER GLU TRP SEQRES 17 C 300 LEU ARG GLU LYS ILE THR THR SER GLY LYS HIS PRO GLN SEQRES 18 C 300 GLN PRO LEU VAL ILE VAL VAL GLY THR SER LEU ALA VAL SEQRES 19 C 300 TYR PRO PHE ALA SER LEU PRO GLU GLU ILE PRO ARG LYS SEQRES 20 C 300 VAL LYS ARG VAL LEU CYS ASN LEU GLU THR VAL GLY ASP SEQRES 21 C 300 PHE LYS ALA ASN LYS ARG PRO THR ASP LEU ILE VAL HIS SEQRES 22 C 300 GLN TYR SER ASP GLU PHE ALA GLU GLN LEU VAL GLU GLU SEQRES 23 C 300 LEU GLY TRP GLN GLU ASP PHE GLU LYS ILE LEU THR ALA SEQRES 24 C 300 GLN HET ZN A 401 1 HET CL A 703 1 HET APR A1001 36 HET ZN B 401 1 HET CL B 702 1 HET CL B 704 1 HET APR B1002 36 HET ZN C 401 1 HET CL C 701 1 HET APR C1003 36 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM APR ADENOSINE-5-DIPHOSPHORIBOSE FORMUL 4 ZN 3(ZN 2+) FORMUL 5 CL 4(CL 1-) FORMUL 6 APR 3(C15 H23 N5 O14 P2) FORMUL 14 HOH *162(H2 O) HELIX 1 1 SER A 7 ASN A 22 1 16 HELIX 2 2 ALA A 33 THR A 37 5 5 HELIX 3 3 GLY A 50 ASN A 54 5 5 HELIX 4 4 LEU A 55 LYS A 59 5 5 HELIX 5 5 TYR A 62 PHE A 67 5 6 HELIX 6 6 ASP A 68 ASP A 75 1 8 HELIX 7 7 PRO A 76 TYR A 87 1 12 HELIX 8 8 SER A 94 LYS A 106 1 13 HELIX 9 9 THR A 119 ALA A 124 1 6 HELIX 10 10 LYS A 127 ASP A 129 5 3 HELIX 11 11 PRO A 152 GLU A 161 1 10 HELIX 12 12 PRO A 189 LYS A 206 1 18 HELIX 13 13 PRO A 230 ILE A 238 5 9 HELIX 14 14 VAL A 252 LYS A 256 5 5 HELIX 15 15 TYR A 269 LEU A 281 1 13 HELIX 16 16 TRP A 283 GLN A 294 1 12 HELIX 17 17 SER B 7 ASN B 22 1 16 HELIX 18 18 ALA B 33 GLY B 40 5 8 HELIX 19 19 GLY B 50 ASN B 54 5 5 HELIX 20 20 LEU B 55 LYS B 59 5 5 HELIX 21 21 TYR B 62 PHE B 67 5 6 HELIX 22 22 ASP B 68 ASP B 75 1 8 HELIX 23 23 PRO B 76 TYR B 87 1 12 HELIX 24 24 SER B 94 LYS B 106 1 13 HELIX 25 25 THR B 119 ALA B 124 1 6 HELIX 26 26 LYS B 127 ASP B 129 5 3 HELIX 27 27 PRO B 152 GLU B 161 1 10 HELIX 28 28 PRO B 189 ILE B 207 1 19 HELIX 29 29 PRO B 230 ILE B 238 5 9 HELIX 30 30 VAL B 252 ASN B 258 1 7 HELIX 31 31 TYR B 269 GLY B 282 1 14 HELIX 32 32 TRP B 283 ALA B 293 1 11 HELIX 33 33 SER C 7 SER C 21 1 15 HELIX 34 34 ALA C 33 GLY C 40 5 8 HELIX 35 35 GLY C 50 ASN C 54 5 5 HELIX 36 36 LEU C 55 LYS C 59 5 5 HELIX 37 37 TYR C 62 PHE C 67 5 6 HELIX 38 38 ASP C 68 ASP C 75 1 8 HELIX 39 39 PRO C 76 LYS C 84 1 9 HELIX 40 40 GLU C 85 TYR C 87 5 3 HELIX 41 41 SER C 94 LYS C 106 1 13 HELIX 42 42 THR C 119 ALA C 124 1 6 HELIX 43 43 LYS C 127 ASP C 129 5 3 HELIX 44 44 PRO C 152 LYS C 158 1 7 HELIX 45 45 PRO C 189 GLU C 205 1 17 HELIX 46 46 PRO C 230 LEU C 234 5 5 HELIX 47 47 VAL C 252 ALA C 257 1 6 HELIX 48 48 TYR C 269 GLY C 282 1 14 HELIX 49 49 TRP C 283 ALA C 293 1 11 SHEET 1 A 2 SER A 2 VAL A 3 0 SHEET 2 A 2 VAL C 228 TYR C 229 -1 O TYR C 229 N SER A 2 SHEET 1 B 6 ILE A 131 GLU A 133 0 SHEET 2 B 6 LEU A 109 THR A 114 1 N THR A 114 O ILE A 132 SHEET 3 B 6 VAL A 27 VAL A 31 1 N VAL A 27 O LYS A 110 SHEET 4 B 6 LEU A 218 VAL A 222 1 O VAL A 222 N MET A 30 SHEET 5 B 6 LYS A 243 CYS A 247 1 O VAL A 245 N VAL A 221 SHEET 6 B 6 LEU A 264 VAL A 266 1 O VAL A 266 N LEU A 246 SHEET 1 C 3 VAL A 149 TYR A 150 0 SHEET 2 C 3 GLY A 136 CYS A 143 -1 N CYS A 141 O TYR A 150 SHEET 3 C 3 VAL A 177 ILE A 181 -1 O LYS A 178 N HIS A 142 SHEET 1 D 2 VAL A 228 TYR A 229 0 SHEET 2 D 2 SER B 2 VAL B 3 -1 O SER B 2 N TYR A 229 SHEET 1 E 6 ILE B 131 GLU B 133 0 SHEET 2 E 6 LEU B 109 THR B 114 1 N VAL B 112 O ILE B 132 SHEET 3 E 6 VAL B 27 VAL B 31 1 N PHE B 29 O TYR B 113 SHEET 4 E 6 LEU B 218 VAL B 222 1 O ILE B 220 N ILE B 28 SHEET 5 E 6 ARG B 244 CYS B 247 1 O VAL B 245 N VAL B 221 SHEET 6 E 6 LEU B 264 VAL B 266 1 O VAL B 266 N LEU B 246 SHEET 1 F 3 VAL B 149 TYR B 150 0 SHEET 2 F 3 GLY B 136 CYS B 143 -1 N CYS B 141 O TYR B 150 SHEET 3 F 3 VAL B 177 ILE B 181 -1 O LYS B 178 N HIS B 142 SHEET 1 G 2 VAL B 228 TYR B 229 0 SHEET 2 G 2 SER C 2 VAL C 3 -1 O SER C 2 N TYR B 229 SHEET 1 H 6 ILE C 131 GLU C 133 0 SHEET 2 H 6 LEU C 109 THR C 114 1 N THR C 114 O ILE C 132 SHEET 3 H 6 VAL C 27 VAL C 31 1 N PHE C 29 O TYR C 113 SHEET 4 H 6 VAL C 219 VAL C 222 1 O ILE C 220 N ILE C 28 SHEET 5 H 6 ARG C 244 CYS C 247 1 O VAL C 245 N VAL C 221 SHEET 6 H 6 LEU C 264 VAL C 266 1 O VAL C 266 N LEU C 246 SHEET 1 I 3 VAL C 149 TYR C 150 0 SHEET 2 I 3 GLY C 136 CYS C 143 -1 N CYS C 141 O TYR C 150 SHEET 3 I 3 VAL C 177 ILE C 181 -1 O LYS C 178 N HIS C 142 LINK SG CYS A 143 ZN ZN A 401 1555 1555 2.52 LINK SG CYS A 146 ZN ZN A 401 1555 1555 2.43 LINK SG CYS A 170 ZN ZN A 401 1555 1555 2.30 LINK SG CYS A 173 ZN ZN A 401 1555 1555 2.37 LINK SG CYS B 143 ZN ZN B 401 1555 1555 2.51 LINK SG CYS B 146 ZN ZN B 401 1555 1555 2.48 LINK SG CYS B 170 ZN ZN B 401 1555 1555 2.38 LINK SG CYS B 173 ZN ZN B 401 1555 1555 2.49 LINK SG CYS C 143 ZN ZN C 401 1555 1555 2.54 LINK SG CYS C 146 ZN ZN C 401 1555 1555 2.34 LINK SG CYS C 170 ZN ZN C 401 1555 1555 2.31 LINK SG CYS C 173 ZN ZN C 401 1555 1555 2.43 CISPEP 1 TYR A 229 PRO A 230 0 0.05 CISPEP 2 TYR B 229 PRO B 230 0 0.17 CISPEP 3 TYR C 229 PRO C 230 0 0.28 SITE 1 AC1 4 CYS A 143 CYS A 146 CYS A 170 CYS A 173 SITE 1 AC2 4 CYS B 143 CYS B 146 CYS B 170 CYS B 173 SITE 1 AC3 4 CYS C 143 CYS C 146 CYS C 170 CYS C 173 SITE 1 AC4 2 ARG C 204 ARG C 240 SITE 1 AC5 1 TRP B 202 SITE 1 AC6 2 ARG A 204 ARG A 240 SITE 1 AC7 2 ARG B 204 ARG B 240 SITE 1 AC8 23 GLY A 32 ALA A 33 GLY A 34 THR A 37 SITE 2 AC8 23 ASP A 43 PHE A 44 ARG A 45 TYR A 52 SITE 3 AC8 23 GLN A 115 HIS A 135 GLY A 223 THR A 224 SITE 4 AC8 23 SER A 225 VAL A 228 ASN A 248 LEU A 249 SITE 5 AC8 23 GLU A 250 GLN A 268 TYR A 269 SER A 270 SITE 6 AC8 23 HOH A1003 HOH A1025 HOH A1041 SITE 1 AC9 24 GLY B 32 ALA B 33 GLY B 34 THR B 37 SITE 2 AC9 24 ASP B 43 PHE B 44 ARG B 45 TYR B 52 SITE 3 AC9 24 GLN B 115 HIS B 135 GLY B 223 THR B 224 SITE 4 AC9 24 SER B 225 VAL B 228 ASN B 248 LEU B 249 SITE 5 AC9 24 GLN B 268 TYR B 269 SER B 270 HOH B1007 SITE 6 AC9 24 HOH B1009 HOH B1023 HOH B1024 HOH B1046 SITE 1 BC1 20 GLY C 32 ALA C 33 GLY C 34 THR C 37 SITE 2 BC1 20 ASP C 43 PHE C 44 ARG C 45 TYR C 52 SITE 3 BC1 20 GLN C 115 HIS C 135 GLY C 223 THR C 224 SITE 4 BC1 20 SER C 225 VAL C 228 ASN C 248 LEU C 249 SITE 5 BC1 20 GLN C 268 TYR C 269 SER C 270 HOH C1022 CRYST1 146.159 109.682 85.825 90.00 104.90 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006842 0.000000 0.001820 0.00000 SCALE2 0.000000 0.009117 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012057 0.00000