HEADER CELL ADHESION 28-JUL-03 1Q38 TITLE ANASTELLIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: FIBRONECTIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TYPE 3 (FN3) DOMAIN; COMPND 5 SYNONYM: FN, COLD-INSOLUBLE GLOBULIN, CIG, ANASTELLIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FN1 OR FN; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS AMYLOID FIBRIL, ANASTELLIN, EXTRACELLULAR MATRIX, FIBRONECTIN TYPE 3 KEYWDS 2 (FN3) DOMAIN, DYNAMIC FLUCTUATIONS, CONFORMATIONAL EXCHANGE, CHAPS, KEYWDS 3 CELL ADHESION EXPDTA SOLUTION NMR NUMMDL 35 AUTHOR K.BRIKNAROVA,M.E.AKERMAN,D.W.HOYT,E.RUOSLAHTI,K.R.ELY REVDAT 3 02-MAR-22 1Q38 1 REMARK SEQADV REVDAT 2 24-FEB-09 1Q38 1 VERSN REVDAT 1 04-NOV-03 1Q38 0 JRNL AUTH K.BRIKNAROVA,M.E.AKERMAN,D.W.HOYT,E.RUOSLAHTI,K.R.ELY JRNL TITL ANASTELLIN, AN FN3 FRAGMENT WITH FIBRONECTIN POLYMERIZATION JRNL TITL 2 ACTIVITY, RESEMBLES AMYLOID FIBRIL PRECURSORS JRNL REF J.MOL.BIOL. V. 332 205 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 12946358 JRNL DOI 10.1016/S0022-2836(03)00890-8 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.MORLA,Z.ZHANG,E.RUOSLAHTI REMARK 1 TITL SUPERFIBRONECTIN IS A FUNCTIONALLY DISTINCT FORM OF REMARK 1 TITL 2 FIBRONECTIN REMARK 1 REF NATURE V. 367 193 1994 REMARK 1 REFN ISSN 0028-0836 REMARK 1 DOI 10.1038/367193A0 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.PASQUALINI,S.BOURDOULOUS,E.KOIVUNEN,V.L.WOODS JR., REMARK 1 AUTH 2 E.RUOSLAHTI REMARK 1 TITL A POLYMERIC FORM OF FIBRONECTIN HAS ANTIMETASTATIC EFFECTS REMARK 1 TITL 2 AGAINST MULTIPLE TUMOR TYPES REMARK 1 REF NAT.MED. (N.Y.) V. 2 1197 1996 REMARK 1 REFN ISSN 1078-8956 REMARK 1 REFERENCE 3 REMARK 1 AUTH M.YI,E.RUOSLAHTI REMARK 1 TITL A FIBRONECTIN FRAGMENT INHIBITS TUMOR GROWTH, ANGIOGENESIS, REMARK 1 TITL 2 AND METASTASIS REMARK 1 REF PROC.NATL.ACAD.SCI.USA V. 98 620 2001 REMARK 1 REFN ISSN 0027-8424 REMARK 1 DOI 10.1073/PNAS.98.2.620 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.0, ARIA 1.0 REMARK 3 AUTHORS : BRUNGER (CNS), NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: MULTIPLE ARIA RUNS REMARK 4 REMARK 4 1Q38 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-03. REMARK 100 THE DEPOSITION ID IS D_1000019859. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.5 MM ANASTELLIN U-15N, 10 MM REMARK 210 NA2HPO4, 1.8 MM KH2PO4, 140 MM REMARK 210 NACL, 2.7 MM KCL, 2 MM CHAPS; REMARK 210 1.5 MM ANASTELLIN U-15N,13C, 10 REMARK 210 MM NA2HPO4, 1.8 MM KH2PO4, 140 REMARK 210 MM NACL, 2.7 MM KCL, 2 MM CHAPS REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : UNITYPLUS; INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 1.0, FELIX 2000 REMARK 210 METHOD USED : ARIA PROTOCOL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 35 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 2 -78.20 -88.20 REMARK 500 1 PRO A 9 -158.92 -85.92 REMARK 500 1 HIS A 11 -157.89 -94.52 REMARK 500 1 LYS A 14 143.84 -171.62 REMARK 500 1 PRO A 21 109.94 -57.60 REMARK 500 1 VAL A 25 85.16 33.77 REMARK 500 1 PRO A 34 91.90 -64.77 REMARK 500 1 HIS A 36 71.18 -107.45 REMARK 500 1 LYS A 43 -156.49 -123.16 REMARK 500 1 LEU A 45 -166.19 -101.63 REMARK 500 1 HIS A 63 96.91 62.77 REMARK 500 1 GLN A 64 -89.93 -124.05 REMARK 500 1 THR A 73 -110.39 -112.76 REMARK 500 1 SER A 77 -102.56 -148.61 REMARK 500 1 SER A 83 85.98 -165.79 REMARK 500 1 HIS A 84 27.57 -166.10 REMARK 500 1 HIS A 87 153.99 64.91 REMARK 500 2 SER A 4 -24.68 -152.80 REMARK 500 2 LYS A 14 143.95 -171.48 REMARK 500 2 PRO A 34 78.35 -56.53 REMARK 500 2 HIS A 36 104.19 74.68 REMARK 500 2 ASN A 38 -63.36 167.22 REMARK 500 2 GLN A 64 0.13 -170.24 REMARK 500 2 THR A 73 91.58 76.81 REMARK 500 2 THR A 74 -153.36 -172.07 REMARK 500 2 ARG A 82 -98.57 56.53 REMARK 500 2 SER A 83 13.31 58.61 REMARK 500 2 HIS A 85 86.66 58.53 REMARK 500 3 LYS A 14 144.58 -171.55 REMARK 500 3 PRO A 34 90.89 -59.63 REMARK 500 3 HIS A 36 93.72 -160.15 REMARK 500 3 ASN A 38 -85.81 169.02 REMARK 500 3 GLN A 64 6.87 -153.81 REMARK 500 3 THR A 73 78.94 76.52 REMARK 500 3 THR A 74 136.68 170.51 REMARK 500 3 PRO A 79 -136.29 -79.91 REMARK 500 3 HIS A 87 -151.57 56.06 REMARK 500 4 ARG A 2 48.04 -162.59 REMARK 500 4 SER A 10 71.87 -165.79 REMARK 500 4 HIS A 11 -86.42 61.13 REMARK 500 4 LYS A 14 143.97 -175.45 REMARK 500 4 VAL A 25 41.86 35.44 REMARK 500 4 PRO A 34 87.09 -60.26 REMARK 500 4 HIS A 36 99.00 58.62 REMARK 500 4 ASN A 38 -105.06 -176.82 REMARK 500 4 LEU A 45 -167.97 57.32 REMARK 500 4 PRO A 47 45.04 -85.49 REMARK 500 4 GLN A 64 6.70 -166.44 REMARK 500 4 THR A 73 65.32 87.20 REMARK 500 4 THR A 74 146.99 174.24 REMARK 500 REMARK 500 THIS ENTRY HAS 531 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1FNA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TENTH TYPE III CELL ADHESION MODULE OF REMARK 900 HUMAN FIBRONECTIN REMARK 900 RELATED ID: 1FNF RELATED DB: PDB REMARK 900 FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 REMARK 900 THROUGH 10 REMARK 900 RELATED ID: 1FNH RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HEPARIN AND INTEGRIN BINDING SEGMENT OF HUMAN REMARK 900 FIBRONECTIN REMARK 900 RELATED ID: 1J8K RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE FIBRONECTIN EDA DOMAIN, NMR, 20 STRUCTURES REMARK 900 RELATED ID: 2FNB RELATED DB: PDB REMARK 900 NMR STRUCTURE OF THE FIBRONECTIN ED-B DOMAIN, NMR, 20 STRUCTURES DBREF 1Q38 A 5 79 UNP P02751 FINC_HUMAN 631 705 SEQADV 1Q38 MET A 1 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 ARG A 2 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 GLY A 3 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 SER A 4 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 GLY A 80 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 SER A 81 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 ARG A 82 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 SER A 83 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 84 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 85 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 86 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 87 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 88 UNP P02751 CLONING ARTIFACT SEQADV 1Q38 HIS A 89 UNP P02751 CLONING ARTIFACT SEQRES 1 A 89 MET ARG GLY SER ASN ALA PRO GLN PRO SER HIS ILE SER SEQRES 2 A 89 LYS TYR ILE LEU ARG TRP ARG PRO LYS ASN SER VAL GLY SEQRES 3 A 89 ARG TRP LYS GLU ALA THR ILE PRO GLY HIS LEU ASN SER SEQRES 4 A 89 TYR THR ILE LYS GLY LEU LYS PRO GLY VAL VAL TYR GLU SEQRES 5 A 89 GLY GLN LEU ILE SER ILE GLN GLN TYR GLY HIS GLN GLU SEQRES 6 A 89 VAL THR ARG PHE ASP PHE THR THR THR SER THR SER THR SEQRES 7 A 89 PRO GLY SER ARG SER HIS HIS HIS HIS HIS HIS SHEET 1 A 4 LYS A 29 ILE A 33 0 SHEET 2 A 4 LYS A 14 PRO A 21 -1 N TYR A 15 O ILE A 33 SHEET 3 A 4 TYR A 51 ILE A 58 -1 O ILE A 58 N LYS A 14 SHEET 4 A 4 VAL A 66 PHE A 71 -1 O PHE A 69 N GLY A 53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1