HEADER TRANSFERASE 01-AUG-03 1Q44 TITLE CRYSTAL STRUCTURE OF AN ARABIDOPSIS THALIANA PUTATIVE STEROID TITLE 2 SULFOTRANSFERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: STEROID SULFOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: FLAVONOL SULFOTRANSFERASE-LIKE; RARO47; AT2G03760/F19B11.21; COMPND 5 EC: 2.8.2.-; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: APO FORM SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: AT2G03760; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PVP13 KEYWDS ARABIDOPSIS THALIANA, STEROID SULFOTRANSFERASE, APO, STRUCTURAL KEYWDS 2 GENOMICS, PROTEIN STRUCTURE INITIATIVE, CENTER FOR EUKARYOTIC KEYWDS 3 STRUCTURAL GENOMICS, CESG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.N.PHILLIPS JR.,D.W.SMITH,K.A.JOHNSON,C.A.BINGMAN,CENTER FOR AUTHOR 2 EUKARYOTIC STRUCTURAL GENOMICS (CESG) REVDAT 10 03-APR-24 1Q44 1 REMARK REVDAT 9 14-FEB-24 1Q44 1 REMARK REVDAT 8 11-OCT-17 1Q44 1 REMARK REVDAT 7 29-APR-15 1Q44 1 HETSYN REVDAT 6 13-JUL-11 1Q44 1 VERSN REVDAT 5 24-FEB-09 1Q44 1 VERSN REVDAT 4 12-FEB-08 1Q44 1 REMARK REVDAT 3 01-FEB-05 1Q44 1 AUTHOR KEYWDS REMARK REVDAT 2 21-DEC-04 1Q44 1 JRNL REMARK REVDAT 1 25-NOV-03 1Q44 0 JRNL AUTH D.W.SMITH,K.A.JOHNSON,C.A.BINGMAN,D.J.ACETI,P.G.BLOMMEL, JRNL AUTH 2 R.L.WROBEL,R.O.FREDERICK,Q.ZHAO,H.SREENATH,B.G.FOX, JRNL AUTH 3 B.F.VOLKMAN,W.B.JEON,C.S.NEWMAN,E.L.ULRICH,A.D.HEGEMAN, JRNL AUTH 4 T.KIMBALL,S.THAO,M.R.SUSSMAN,J.L.MARKLEY,G.N.PHILLIPS JR. JRNL TITL CRYSTAL STRUCTURE OF AT2G03760, A PUTATIVE STEROID JRNL TITL 2 SULFOTRANSFERASE FROM ARABIDOPSIS THALIANA JRNL REF PROTEINS V. 57 854 2004 JRNL REFN ISSN 0887-3585 JRNL PMID 15317023 JRNL DOI 10.1002/PROT.20258 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 30975 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1654 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2215 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2510 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2302 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 7 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.47000 REMARK 3 B22 (A**2) : 3.00000 REMARK 3 B33 (A**2) : -1.53000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.129 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.123 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.900 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2378 ; 0.020 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 2123 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3219 ; 1.903 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4972 ; 0.948 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 281 ; 6.976 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 350 ; 0.116 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2589 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 485 ; 0.019 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 496 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2409 ; 0.242 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 1364 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 169 ; 0.183 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.197 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 65 ; 0.312 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.376 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1420 ; 1.254 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2304 ; 2.207 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 958 ; 2.941 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 915 ; 4.747 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1Q44 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-AUG-03. REMARK 100 THE DEPOSITION ID IS D_1000019891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-03; NULL REMARK 200 TEMPERATURE (KELVIN) : 90; 90 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : APS; APS REMARK 200 BEAMLINE : 14-ID-B; 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979; 1.127 REMARK 200 MONOCHROMATOR : DIAMOND (111) DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR; DIAMOND (111) REMARK 200 DOUBLE-CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : BENT CYLINDRICAL SI-MIRROR (RH REMARK 200 COATING); NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32697 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : 0.04800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 43.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.33600 REMARK 200 R SYM FOR SHELL (I) : 0.33600 REMARK 200 <I/SIGMA(I)> FOR SHELL : 5.070 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: BUILT FROM MAD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM MALONATE, MES, PH 6.0, MICRO REMARK 280 -BATCH, TEMPERATURE 297K, MICROBATCH REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.15750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.15750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.73850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.44950 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.73850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.44950 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 37.15750 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.73850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.44950 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 37.15750 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.73850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.44950 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 4110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 91.47700 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 37.15750 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 ALA A 179 REMARK 465 PRO A 180 REMARK 465 GLU A 181 REMARK 465 GLU A 182 REMARK 465 THR A 183 REMARK 465 ALA A 184 REMARK 465 ASP A 185 REMARK 465 SER A 267 REMARK 465 LEU A 268 REMARK 465 SER A 269 REMARK 465 ASN A 270 REMARK 465 LEU A 271 REMARK 465 GLU A 272 REMARK 465 VAL A 273 REMARK 465 ASN A 274 REMARK 465 LYS A 275 REMARK 465 GLU A 276 REMARK 465 GLY A 277 REMARK 465 LYS A 278 REMARK 465 LEU A 279 REMARK 465 PRO A 280 REMARK 465 ASN A 281 REMARK 465 GLY A 282 REMARK 465 ILE A 283 REMARK 465 GLU A 284 REMARK 465 THR A 285 REMARK 465 LYS A 286 REMARK 465 THR A 287 REMARK 465 PHE A 288 REMARK 465 PHE A 289 REMARK 465 ARG A 290 REMARK 465 LYS A 291 REMARK 465 GLY A 292 REMARK 465 GLU A 293 REMARK 465 ILE A 294 REMARK 465 GLY A 295 REMARK 465 SER A 326 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 176 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 904 O HOH A 950 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 16 CA - CB - CG ANGL. DEV. = -16.4 DEGREES REMARK 500 ASP A 65 CB - CG - OD2 ANGL. DEV. = 6.1 DEGREES REMARK 500 ASP A 207 CB - CG - OD2 ANGL. DEV. = 6.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 99 -67.75 11.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 320 GLY A 321 -41.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MLA A 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1Q45 RELATED DB: PDB REMARK 900 RELATED ID: GO.7312 RELATED DB: TARGETDB DBREF 1Q44 A 1 326 UNP P52839 FSTL_ARATH 1 326 SEQRES 1 A 326 MET SER SER SER SER SER VAL PRO ALA TYR LEU GLY ASP SEQRES 2 A 326 GLU ASP LEU THR GLN GLU THR ARG ALA LEU ILE SER SER SEQRES 3 A 326 LEU PRO LYS GLU LYS GLY TRP LEU VAL SER GLU ILE TYR SEQRES 4 A 326 GLU PHE GLN GLY LEU TRP HIS THR GLN ALA ILE LEU GLN SEQRES 5 A 326 GLY ILE LEU ILE CYS GLN LYS ARG PHE GLU ALA LYS ASP SEQRES 6 A 326 SER ASP ILE ILE LEU VAL THR ASN PRO LYS SER GLY THR SEQRES 7 A 326 THR TRP LEU LYS ALA LEU VAL PHE ALA LEU LEU ASN ARG SEQRES 8 A 326 HIS LYS PHE PRO VAL SER SER SER GLY ASN HIS PRO LEU SEQRES 9 A 326 LEU VAL THR ASN PRO HIS LEU LEU VAL PRO PHE LEU GLU SEQRES 10 A 326 GLY VAL TYR TYR GLU SER PRO ASP PHE ASP PHE SER SER SEQRES 11 A 326 LEU PRO SER PRO ARG LEU MET ASN THR HIS ILE SER HIS SEQRES 12 A 326 LEU SER LEU PRO GLU SER VAL LYS SER SER SER CYS LYS SEQRES 13 A 326 ILE VAL TYR CYS CYS ARG ASN PRO LYS ASP MET PHE VAL SEQRES 14 A 326 SER LEU TRP HIS PHE GLY LYS LYS LEU ALA PRO GLU GLU SEQRES 15 A 326 THR ALA ASP TYR PRO ILE GLU LYS ALA VAL GLU ALA PHE SEQRES 16 A 326 CYS GLU GLY LYS PHE ILE GLY GLY PRO PHE TRP ASP HIS SEQRES 17 A 326 ILE LEU GLU TYR TRP TYR ALA SER ARG GLU ASN PRO ASN SEQRES 18 A 326 LYS VAL LEU PHE VAL THR TYR GLU GLU LEU LYS LYS GLN SEQRES 19 A 326 THR GLU VAL GLU MET LYS ARG ILE ALA GLU PHE LEU GLU SEQRES 20 A 326 CYS GLY PHE ILE GLU GLU GLU GLU VAL ARG GLU ILE VAL SEQRES 21 A 326 LYS LEU CYS SER PHE GLU SER LEU SER ASN LEU GLU VAL SEQRES 22 A 326 ASN LYS GLU GLY LYS LEU PRO ASN GLY ILE GLU THR LYS SEQRES 23 A 326 THR PHE PHE ARG LYS GLY GLU ILE GLY GLY TRP ARG ASP SEQRES 24 A 326 THR LEU SER GLU SER LEU ALA GLU GLU ILE ASP ARG THR SEQRES 25 A 326 ILE GLU GLU LYS PHE LYS GLY SER GLY LEU LYS PHE SER SEQRES 26 A 326 SER HET MLA A 901 7 HETNAM MLA MALONIC ACID HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 MLA C3 H4 O4 FORMUL 3 HOH *214(H2 O) HELIX 1 1 ASP A 13 LEU A 27 1 15 HELIX 2 2 THR A 47 PHE A 61 1 15 HELIX 3 3 THR A 78 ASN A 90 1 13 HELIX 4 4 PRO A 95 ASN A 101 5 7 HELIX 5 5 HIS A 102 THR A 107 1 6 HELIX 6 6 ASN A 108 VAL A 113 1 6 HELIX 7 7 PHE A 115 SER A 123 1 9 HELIX 8 8 ASP A 127 LEU A 131 5 5 HELIX 9 9 SER A 142 LEU A 146 5 5 HELIX 10 10 PRO A 147 SER A 153 1 7 HELIX 11 11 ASN A 163 LEU A 178 1 16 HELIX 12 12 PRO A 187 GLY A 198 1 12 HELIX 13 13 PRO A 204 ASN A 219 1 16 HELIX 14 14 TYR A 228 GLN A 234 1 7 HELIX 15 15 GLN A 234 GLU A 247 1 14 HELIX 16 16 GLU A 252 SER A 264 1 13 HELIX 17 17 GLY A 296 LEU A 301 1 6 HELIX 18 18 SER A 302 PHE A 317 1 16 SHEET 1 A 3 LYS A 29 LYS A 31 0 SHEET 2 A 3 GLU A 37 PHE A 41 -1 O ILE A 38 N GLU A 30 SHEET 3 A 3 LEU A 44 HIS A 46 -1 O LEU A 44 N PHE A 41 SHEET 1 B 4 LEU A 136 THR A 139 0 SHEET 2 B 4 ILE A 68 VAL A 71 1 N LEU A 70 O MET A 137 SHEET 3 B 4 LYS A 156 CYS A 161 1 O VAL A 158 N VAL A 71 SHEET 4 B 4 VAL A 223 THR A 227 1 O LEU A 224 N TYR A 159 CISPEP 1 SER A 133 PRO A 134 0 6.07 CISPEP 2 GLY A 203 PRO A 204 0 0.88 CISPEP 3 LYS A 318 GLY A 319 0 -23.24 SITE 1 AC1 9 HIS A 46 THR A 47 ILE A 50 PRO A 74 SITE 2 AC1 9 HIS A 140 ILE A 201 HOH A 934 HOH A1023 SITE 3 AC1 9 HOH A1027 CRYST1 91.477 120.899 74.315 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010932 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008271 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013456 0.00000