HEADER VIRAL PROTEIN 06-AUG-03 1Q59 TITLE SOLUTION STRUCTURE OF THE BHRF1 PROTEIN FROM EPSTEIN-BARR VIRUS, A TITLE 2 HOMOLOG OF HUMAN BCL-2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EARLY ANTIGEN PROTEIN R; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BH1 AND BH2 DOMAINS; COMPND 5 SYNONYM: BHRF1, EA-R, NUCLEAR ANTIGEN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 4; SOURCE 3 ORGANISM_COMMON: EPSTEIN-BARR VIRUS; SOURCE 4 ORGANISM_TAXID: 10376; SOURCE 5 STRAIN: GD1; SOURCE 6 GENE: BHRF1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BHRF1, BCL-2, EPSTEIN-BARR VIRUS, NMR SPECTROSCOPY, STRUCTURE KEYWDS 2 DETERMINATION, VIRAL PROTEIN EXPDTA SOLUTION NMR MDLTYP MINIMIZED AVERAGE AUTHOR Q.HUANG,A.M.PETROS,H.W.VIRGIN,S.W.FESIK,E.T.OLEJNICZAK REVDAT 3 02-MAR-22 1Q59 1 REMARK SEQADV REVDAT 2 24-FEB-09 1Q59 1 VERSN REVDAT 1 23-SEP-03 1Q59 0 JRNL AUTH Q.HUANG,A.M.PETROS,H.W.VIRGIN,S.W.FESIK,E.T.OLEJNICZAK JRNL TITL SOLUTION STRUCTURE OF THE BHRF1 PROTEIN FROM EPSTEIN-BARR JRNL TITL 2 VIRUS, A HOMOLOG OF HUMAN BCL-2 JRNL REF J.MOL.BIOL. V. 332 1123 2003 JRNL REFN ISSN 0022-2836 JRNL PMID 14499614 JRNL DOI 10.1016/J.JMB.2003.08.007 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 2000 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1Q59 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-03. REMARK 100 THE DEPOSITION ID IS D_1000019932. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 20MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : U-15N,13C 0.5-1.0 MM BHRF1-EBV REMARK 210 -BCL2 , CONTAINING 20 MM TRIS REMARK 210 (PH 7.5) AND 2 MM 2H- REMARK 210 DITHIOTHREITOL REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : BHRF1 STRUCTURES WERE CALCULATED REMARK 210 USING A SIMULATED ANNEALING REMARK 210 PROTOCOL WITH THE PROGRAM CNX REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : NULL REMARK 210 CONFORMERS, NUMBER SUBMITTED : 1 REMARK 210 CONFORMERS, SELECTION CRITERIA : NULL REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LEU A 140 H ILE A 144 1.56 REMARK 500 O LEU A 153 H GLU A 155 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 106.20 -54.52 REMARK 500 PRO A 27 11.59 -64.53 REMARK 500 VAL A 28 35.66 -92.58 REMARK 500 LEU A 29 46.06 158.30 REMARK 500 ALA A 33 90.54 -177.13 REMARK 500 ARG A 34 106.45 171.71 REMARK 500 ARG A 39 105.74 -56.82 REMARK 500 PRO A 42 63.04 -66.99 REMARK 500 GLU A 43 26.21 -151.94 REMARK 500 ASP A 44 -175.64 -56.17 REMARK 500 VAL A 52 -70.65 -74.49 REMARK 500 ASN A 61 55.48 -110.77 REMARK 500 ILE A 73 153.01 -37.34 REMARK 500 THR A 74 56.96 95.03 REMARK 500 HIS A 78 35.33 -161.85 REMARK 500 ASP A 95 -53.67 171.25 REMARK 500 PRO A 96 172.95 -47.31 REMARK 500 ALA A 106 -70.22 -77.34 REMARK 500 GLN A 119 65.59 -69.85 REMARK 500 PRO A 122 -171.20 -28.56 REMARK 500 ASP A 141 -74.43 -41.10 REMARK 500 ILE A 154 40.40 -65.33 REMARK 500 GLU A 155 -80.27 -161.75 REMARK 500 ILE A 158 128.96 65.08 REMARK 500 ASP A 161 47.48 176.84 REMARK 500 ASP A 163 -47.80 -175.95 REMARK 500 ASP A 164 -163.46 53.02 REMARK 500 LEU A 165 57.46 -147.37 REMARK 500 HIS A 167 -56.16 -179.49 REMARK 500 HIS A 168 -164.43 -103.03 REMARK 500 HIS A 169 37.57 -154.68 REMARK 500 REMARK 500 REMARK: NULL DBREF 1Q59 A 1 160 UNP P03182 EAR_EBV 1 160 SEQADV 1Q59 ASP A 161 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 ASP A 162 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 ASP A 163 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 ASP A 164 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 LEU A 165 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 GLU A 166 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 167 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 168 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 169 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 170 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 171 UNP P03182 CLONING ARTIFACT SEQADV 1Q59 HIS A 172 UNP P03182 CLONING ARTIFACT SEQRES 1 A 172 MET ALA TYR SER THR ARG GLU ILE LEU LEU ALA LEU CYS SEQRES 2 A 172 ILE ARG ASP SER ARG VAL HIS GLY ASN GLY THR LEU HIS SEQRES 3 A 172 PRO VAL LEU GLU LEU ALA ALA ARG GLU THR PRO LEU ARG SEQRES 4 A 172 LEU SER PRO GLU ASP THR VAL VAL LEU ARG TYR HIS VAL SEQRES 5 A 172 LEU LEU GLU GLU ILE ILE GLU ARG ASN SER GLU THR PHE SEQRES 6 A 172 THR GLU THR TRP ASN ARG PHE ILE THR HIS THR GLU HIS SEQRES 7 A 172 VAL ASP LEU ASP PHE ASN SER VAL PHE LEU GLU ILE PHE SEQRES 8 A 172 HIS ARG GLY ASP PRO SER LEU GLY ARG ALA LEU ALA TRP SEQRES 9 A 172 MET ALA TRP CYS MET HIS ALA CYS ARG THR LEU CYS CYS SEQRES 10 A 172 ASN GLN SER THR PRO TYR TYR VAL VAL ASP LEU SER VAL SEQRES 11 A 172 ARG GLY MET LEU GLU ALA SER GLU GLY LEU ASP GLY TRP SEQRES 12 A 172 ILE HIS GLN GLN GLY GLY TRP SER THR LEU ILE GLU ASP SEQRES 13 A 172 ASN ILE PRO GLY ASP ASP ASP ASP LEU GLU HIS HIS HIS SEQRES 14 A 172 HIS HIS HIS HELIX 1 1 GLU A 7 VAL A 19 1 13 HELIX 2 2 ASP A 44 ASN A 61 1 18 HELIX 3 3 ASN A 61 ILE A 73 1 13 HELIX 4 4 ASP A 80 ILE A 90 1 11 HELIX 5 5 LEU A 98 ASN A 118 1 21 HELIX 6 6 THR A 121 GLU A 138 1 18 HELIX 7 7 GLY A 139 GLN A 146 1 8 HELIX 8 8 THR A 152 ASN A 157 1 6 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000