data_1QKK
#
_entry.id 1QKK
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.391
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 1QKK pdb_00001qkk 10.2210/pdb1qkk/pdb
PDBE EBI-2821 ? ?
WWPDB D_1290002821 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2000-07-30
2 'Structure model' 1 1 2011-05-08
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 1 3 2019-10-09
5 'Structure model' 1 4 2024-05-08
#
_pdbx_audit_revision_details.ordinal 1
_pdbx_audit_revision_details.revision_ordinal 1
_pdbx_audit_revision_details.data_content_type 'Structure model'
_pdbx_audit_revision_details.provider repository
_pdbx_audit_revision_details.type 'Initial release'
_pdbx_audit_revision_details.description ?
_pdbx_audit_revision_details.details ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Data collection'
4 4 'Structure model' 'Database references'
5 5 'Structure model' 'Data collection'
6 5 'Structure model' 'Database references'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' citation
2 4 'Structure model' citation_author
3 5 'Structure model' chem_comp_atom
4 5 'Structure model' chem_comp_bond
5 5 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_citation.page_last'
2 4 'Structure model' '_citation.pdbx_database_id_DOI'
3 4 'Structure model' '_citation.title'
4 5 'Structure model' '_database_2.pdbx_DOI'
5 5 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 1QKK
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 1999-07-23
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf ?
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Meyer, M.G.' 1
'Park, S.' 2
'Zeringue, L.' 3
'Staley, M.' 4
'Mckinstry, M.' 5
'Kaufman, R.I.' 6
'Zhang, H.' 7
'Yan, D.' 8
'Yennawar, N.' 9
'Farber, G.K.' 10
'Nixon, B.T.' 11
#
loop_
_citation.id
_citation.title
_citation.journal_abbrev
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.year
_citation.journal_id_ASTM
_citation.country
_citation.journal_id_ISSN
_citation.journal_id_CSD
_citation.book_publisher
_citation.pdbx_database_id_PubMed
_citation.pdbx_database_id_DOI
primary 'A dimeric two-component receiver domain inhibits the sigma54-dependent ATPase in DctD.' 'Faseb J.' 15 1326 1328 2001
FAJOEC US 0892-6638 2074 ? 11344129 10.1096/fj.00-0516fje
1 'Crystallographic R Factor Refinement by Molecular Dynamics' Science 235 458 ? 1987
SCIEAS US 0036-8075 0038 ? 17810339 10.1126/SCIENCE.235.4787.458
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Meyer, M.G.' 1 ?
primary 'Park, S.' 2 ?
primary 'Zeringue, L.' 3 ?
primary 'Staley, M.' 4 ?
primary 'McKinstry, M.' 5 ?
primary 'Kaufman, R.I.' 6 ?
primary 'Zhang, H.' 7 ?
primary 'Yan, D.' 8 ?
primary 'Yennawar, N.' 9 ?
primary 'Yennawar, H.' 10 ?
primary 'Farber, G.K.' 11 ?
primary 'Nixon, B.T.' 12 ?
1 'Brunger, A.T.' 13 ?
1 'Kuriyan, J.' 14 ?
1 'Karplus, M.' 15 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man 'C4-DICARBOXYLATE TRANSPORT TRANSCRIPTIONAL REGULATORY PROTEIN' 16821.260 1 ? ?
'RESIDUES 2 TO 143, RECEIVER DOMAIN'
;THE PROTEIN WAS EXPRESSED WITH THE C-TERMINAL HIS-TAG, KLAAALEHHHHHH. COORDINATES ARE SUBMITTED ONLY FOR THE MONOMER, WHICH COMPRISES THE COMPLETE ASYMMETRIC UNIT.
;
2 water nat water 18.015 204 ? ? ? ?
#
_entity_name_com.entity_id 1
_entity_name_com.name DCTD
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;SAAPSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMIL
VTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRRLVMENRSLRRAAEAASEGLKLAAALEHHHHHH
;
_entity_poly.pdbx_seq_one_letter_code_can
;SAAPSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMIL
VTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRRLVMENRSLRRAAEAASEGLKLAAALEHHHHHH
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
_pdbx_entity_nonpoly.entity_id 2
_pdbx_entity_nonpoly.name water
_pdbx_entity_nonpoly.comp_id HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 SER n
1 2 ALA n
1 3 ALA n
1 4 PRO n
1 5 SER n
1 6 VAL n
1 7 PHE n
1 8 LEU n
1 9 ILE n
1 10 ASP n
1 11 ASP n
1 12 ASP n
1 13 ARG n
1 14 ASP n
1 15 LEU n
1 16 ARG n
1 17 LYS n
1 18 ALA n
1 19 MET n
1 20 GLN n
1 21 GLN n
1 22 THR n
1 23 LEU n
1 24 GLU n
1 25 LEU n
1 26 ALA n
1 27 GLY n
1 28 PHE n
1 29 THR n
1 30 VAL n
1 31 SER n
1 32 SER n
1 33 PHE n
1 34 ALA n
1 35 SER n
1 36 ALA n
1 37 THR n
1 38 GLU n
1 39 ALA n
1 40 LEU n
1 41 ALA n
1 42 GLY n
1 43 LEU n
1 44 SER n
1 45 ALA n
1 46 ASP n
1 47 PHE n
1 48 ALA n
1 49 GLY n
1 50 ILE n
1 51 VAL n
1 52 ILE n
1 53 SER n
1 54 ASP n
1 55 ILE n
1 56 ARG n
1 57 MET n
1 58 PRO n
1 59 GLY n
1 60 MET n
1 61 ASP n
1 62 GLY n
1 63 LEU n
1 64 ALA n
1 65 LEU n
1 66 PHE n
1 67 ARG n
1 68 LYS n
1 69 ILE n
1 70 LEU n
1 71 ALA n
1 72 LEU n
1 73 ASP n
1 74 PRO n
1 75 ASP n
1 76 LEU n
1 77 PRO n
1 78 MET n
1 79 ILE n
1 80 LEU n
1 81 VAL n
1 82 THR n
1 83 GLY n
1 84 HIS n
1 85 GLY n
1 86 ASP n
1 87 ILE n
1 88 PRO n
1 89 MET n
1 90 ALA n
1 91 VAL n
1 92 GLN n
1 93 ALA n
1 94 ILE n
1 95 GLN n
1 96 ASP n
1 97 GLY n
1 98 ALA n
1 99 TYR n
1 100 ASP n
1 101 PHE n
1 102 ILE n
1 103 ALA n
1 104 LYS n
1 105 PRO n
1 106 PHE n
1 107 ALA n
1 108 ALA n
1 109 ASP n
1 110 ARG n
1 111 LEU n
1 112 VAL n
1 113 GLN n
1 114 SER n
1 115 ALA n
1 116 ARG n
1 117 ARG n
1 118 ALA n
1 119 GLU n
1 120 GLU n
1 121 LYS n
1 122 ARG n
1 123 ARG n
1 124 LEU n
1 125 VAL n
1 126 MET n
1 127 GLU n
1 128 ASN n
1 129 ARG n
1 130 SER n
1 131 LEU n
1 132 ARG n
1 133 ARG n
1 134 ALA n
1 135 ALA n
1 136 GLU n
1 137 ALA n
1 138 ALA n
1 139 SER n
1 140 GLU n
1 141 GLY n
1 142 LEU n
1 143 LYS n
1 144 LEU n
1 145 ALA n
1 146 ALA n
1 147 ALA n
1 148 LEU n
1 149 GLU n
1 150 HIS n
1 151 HIS n
1 152 HIS n
1 153 HIS n
1 154 HIS n
1 155 HIS n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain 'N.A. 1021'
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'SINORHIZOBIUM MELILOTI'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 382
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc ?
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain B834
_entity_src_gen.pdbx_host_org_variant 'B834 PLYSS'
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type PLASMID
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name PET21A
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 SER 1 2 ? ? ? A . n
A 1 2 ALA 2 3 ? ? ? A . n
A 1 3 ALA 3 4 ? ? ? A . n
A 1 4 PRO 4 5 5 PRO PRO A . n
A 1 5 SER 5 6 6 SER SER A . n
A 1 6 VAL 6 7 7 VAL VAL A . n
A 1 7 PHE 7 8 8 PHE PHE A . n
A 1 8 LEU 8 9 9 LEU LEU A . n
A 1 9 ILE 9 10 10 ILE ILE A . n
A 1 10 ASP 10 11 11 ASP ASP A . n
A 1 11 ASP 11 12 12 ASP ASP A . n
A 1 12 ASP 12 13 13 ASP ASP A . n
A 1 13 ARG 13 14 14 ARG ARG A . n
A 1 14 ASP 14 15 15 ASP ASP A . n
A 1 15 LEU 15 16 16 LEU LEU A . n
A 1 16 ARG 16 17 17 ARG ARG A . n
A 1 17 LYS 17 18 18 LYS LYS A . n
A 1 18 ALA 18 19 19 ALA ALA A . n
A 1 19 MET 19 20 20 MET MET A . n
A 1 20 GLN 20 21 21 GLN GLN A . n
A 1 21 GLN 21 22 22 GLN GLN A . n
A 1 22 THR 22 23 23 THR THR A . n
A 1 23 LEU 23 24 24 LEU LEU A . n
A 1 24 GLU 24 25 25 GLU GLU A . n
A 1 25 LEU 25 26 26 LEU LEU A . n
A 1 26 ALA 26 27 27 ALA ALA A . n
A 1 27 GLY 27 28 28 GLY GLY A . n
A 1 28 PHE 28 29 29 PHE PHE A . n
A 1 29 THR 29 30 30 THR THR A . n
A 1 30 VAL 30 31 31 VAL VAL A . n
A 1 31 SER 31 32 32 SER SER A . n
A 1 32 SER 32 33 33 SER SER A . n
A 1 33 PHE 33 34 34 PHE PHE A . n
A 1 34 ALA 34 35 35 ALA ALA A . n
A 1 35 SER 35 36 36 SER SER A . n
A 1 36 ALA 36 37 37 ALA ALA A . n
A 1 37 THR 37 38 38 THR THR A . n
A 1 38 GLU 38 39 39 GLU GLU A . n
A 1 39 ALA 39 40 40 ALA ALA A . n
A 1 40 LEU 40 41 41 LEU LEU A . n
A 1 41 ALA 41 42 42 ALA ALA A . n
A 1 42 GLY 42 43 43 GLY GLY A . n
A 1 43 LEU 43 44 44 LEU LEU A . n
A 1 44 SER 44 45 45 SER SER A . n
A 1 45 ALA 45 46 46 ALA ALA A . n
A 1 46 ASP 46 47 47 ASP ASP A . n
A 1 47 PHE 47 48 48 PHE PHE A . n
A 1 48 ALA 48 49 49 ALA ALA A . n
A 1 49 GLY 49 50 50 GLY GLY A . n
A 1 50 ILE 50 51 51 ILE ILE A . n
A 1 51 VAL 51 52 52 VAL VAL A . n
A 1 52 ILE 52 53 53 ILE ILE A . n
A 1 53 SER 53 54 54 SER SER A . n
A 1 54 ASP 54 55 55 ASP ASP A . n
A 1 55 ILE 55 56 56 ILE ILE A . n
A 1 56 ARG 56 57 57 ARG ARG A . n
A 1 57 MET 57 58 58 MET MET A . n
A 1 58 PRO 58 59 59 PRO PRO A . n
A 1 59 GLY 59 60 60 GLY GLY A . n
A 1 60 MET 60 61 61 MET MET A . n
A 1 61 ASP 61 62 62 ASP ASP A . n
A 1 62 GLY 62 63 63 GLY GLY A . n
A 1 63 LEU 63 64 64 LEU LEU A . n
A 1 64 ALA 64 65 65 ALA ALA A . n
A 1 65 LEU 65 66 66 LEU LEU A . n
A 1 66 PHE 66 67 67 PHE PHE A . n
A 1 67 ARG 67 68 68 ARG ARG A . n
A 1 68 LYS 68 69 69 LYS LYS A . n
A 1 69 ILE 69 70 70 ILE ILE A . n
A 1 70 LEU 70 71 71 LEU LEU A . n
A 1 71 ALA 71 72 72 ALA ALA A . n
A 1 72 LEU 72 73 73 LEU LEU A . n
A 1 73 ASP 73 74 74 ASP ASP A . n
A 1 74 PRO 74 75 75 PRO PRO A . n
A 1 75 ASP 75 76 76 ASP ASP A . n
A 1 76 LEU 76 77 77 LEU LEU A . n
A 1 77 PRO 77 78 78 PRO PRO A . n
A 1 78 MET 78 79 79 MET MET A . n
A 1 79 ILE 79 80 80 ILE ILE A . n
A 1 80 LEU 80 81 81 LEU LEU A . n
A 1 81 VAL 81 82 82 VAL VAL A . n
A 1 82 THR 82 83 83 THR THR A . n
A 1 83 GLY 83 84 84 GLY GLY A . n
A 1 84 HIS 84 85 85 HIS HIS A . n
A 1 85 GLY 85 86 86 GLY GLY A . n
A 1 86 ASP 86 87 87 ASP ASP A . n
A 1 87 ILE 87 88 88 ILE ILE A . n
A 1 88 PRO 88 89 89 PRO PRO A . n
A 1 89 MET 89 90 90 MET MET A . n
A 1 90 ALA 90 91 91 ALA ALA A . n
A 1 91 VAL 91 92 92 VAL VAL A . n
A 1 92 GLN 92 93 93 GLN GLN A . n
A 1 93 ALA 93 94 94 ALA ALA A . n
A 1 94 ILE 94 95 95 ILE ILE A . n
A 1 95 GLN 95 96 96 GLN GLN A . n
A 1 96 ASP 96 97 97 ASP ASP A . n
A 1 97 GLY 97 98 98 GLY GLY A . n
A 1 98 ALA 98 99 99 ALA ALA A . n
A 1 99 TYR 99 100 100 TYR TYR A . n
A 1 100 ASP 100 101 101 ASP ASP A . n
A 1 101 PHE 101 102 102 PHE PHE A . n
A 1 102 ILE 102 103 103 ILE ILE A . n
A 1 103 ALA 103 104 104 ALA ALA A . n
A 1 104 LYS 104 105 105 LYS LYS A . n
A 1 105 PRO 105 106 106 PRO PRO A . n
A 1 106 PHE 106 107 107 PHE PHE A . n
A 1 107 ALA 107 108 108 ALA ALA A . n
A 1 108 ALA 108 109 109 ALA ALA A . n
A 1 109 ASP 109 110 110 ASP ASP A . n
A 1 110 ARG 110 111 111 ARG ARG A . n
A 1 111 LEU 111 112 112 LEU LEU A . n
A 1 112 VAL 112 113 113 VAL VAL A . n
A 1 113 GLN 113 114 114 GLN GLN A . n
A 1 114 SER 114 115 115 SER SER A . n
A 1 115 ALA 115 116 116 ALA ALA A . n
A 1 116 ARG 116 117 117 ARG ARG A . n
A 1 117 ARG 117 118 118 ARG ARG A . n
A 1 118 ALA 118 119 119 ALA ALA A . n
A 1 119 GLU 119 120 120 GLU GLU A . n
A 1 120 GLU 120 121 121 GLU GLU A . n
A 1 121 LYS 121 122 122 LYS LYS A . n
A 1 122 ARG 122 123 123 ARG ARG A . n
A 1 123 ARG 123 124 124 ARG ARG A . n
A 1 124 LEU 124 125 125 LEU LEU A . n
A 1 125 VAL 125 126 126 VAL VAL A . n
A 1 126 MET 126 127 127 MET MET A . n
A 1 127 GLU 127 128 128 GLU GLU A . n
A 1 128 ASN 128 129 129 ASN ASN A . n
A 1 129 ARG 129 130 130 ARG ARG A . n
A 1 130 SER 130 131 131 SER SER A . n
A 1 131 LEU 131 132 132 LEU LEU A . n
A 1 132 ARG 132 133 133 ARG ARG A . n
A 1 133 ARG 133 134 134 ARG ARG A . n
A 1 134 ALA 134 135 135 ALA ALA A . n
A 1 135 ALA 135 136 136 ALA ALA A . n
A 1 136 GLU 136 137 137 GLU GLU A . n
A 1 137 ALA 137 138 138 ALA ALA A . n
A 1 138 ALA 138 139 139 ALA ALA A . n
A 1 139 SER 139 140 140 SER SER A . n
A 1 140 GLU 140 141 141 GLU GLU A . n
A 1 141 GLY 141 142 142 GLY GLY A . n
A 1 142 LEU 142 143 143 LEU LEU A . n
A 1 143 LYS 143 144 144 LYS LYS A . n
A 1 144 LEU 144 145 ? ? ? A . n
A 1 145 ALA 145 146 ? ? ? A . n
A 1 146 ALA 146 147 ? ? ? A . n
A 1 147 ALA 147 148 ? ? ? A . n
A 1 148 LEU 148 149 ? ? ? A . n
A 1 149 GLU 149 150 ? ? ? A . n
A 1 150 HIS 150 151 ? ? ? A . n
A 1 151 HIS 151 152 ? ? ? A . n
A 1 152 HIS 152 153 ? ? ? A . n
A 1 153 HIS 153 154 ? ? ? A . n
A 1 154 HIS 154 155 ? ? ? A . n
A 1 155 HIS 155 156 ? ? ? A . n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HOH 1 2001 2001 HOH HOH A .
B 2 HOH 2 2002 2002 HOH HOH A .
B 2 HOH 3 2003 2003 HOH HOH A .
B 2 HOH 4 2004 2004 HOH HOH A .
B 2 HOH 5 2005 2005 HOH HOH A .
B 2 HOH 6 2006 2006 HOH HOH A .
B 2 HOH 7 2007 2007 HOH HOH A .
B 2 HOH 8 2008 2008 HOH HOH A .
B 2 HOH 9 2009 2009 HOH HOH A .
B 2 HOH 10 2010 2010 HOH HOH A .
B 2 HOH 11 2011 2011 HOH HOH A .
B 2 HOH 12 2012 2012 HOH HOH A .
B 2 HOH 13 2013 2013 HOH HOH A .
B 2 HOH 14 2014 2014 HOH HOH A .
B 2 HOH 15 2015 2015 HOH HOH A .
B 2 HOH 16 2016 2016 HOH HOH A .
B 2 HOH 17 2017 2017 HOH HOH A .
B 2 HOH 18 2018 2018 HOH HOH A .
B 2 HOH 19 2019 2019 HOH HOH A .
B 2 HOH 20 2020 2020 HOH HOH A .
B 2 HOH 21 2021 2021 HOH HOH A .
B 2 HOH 22 2022 2022 HOH HOH A .
B 2 HOH 23 2023 2023 HOH HOH A .
B 2 HOH 24 2024 2024 HOH HOH A .
B 2 HOH 25 2025 2025 HOH HOH A .
B 2 HOH 26 2026 2026 HOH HOH A .
B 2 HOH 27 2027 2027 HOH HOH A .
B 2 HOH 28 2028 2028 HOH HOH A .
B 2 HOH 29 2029 2029 HOH HOH A .
B 2 HOH 30 2030 2030 HOH HOH A .
B 2 HOH 31 2031 2031 HOH HOH A .
B 2 HOH 32 2032 2032 HOH HOH A .
B 2 HOH 33 2033 2033 HOH HOH A .
B 2 HOH 34 2034 2034 HOH HOH A .
B 2 HOH 35 2035 2035 HOH HOH A .
B 2 HOH 36 2036 2036 HOH HOH A .
B 2 HOH 37 2037 2037 HOH HOH A .
B 2 HOH 38 2038 2038 HOH HOH A .
B 2 HOH 39 2039 2039 HOH HOH A .
B 2 HOH 40 2040 2040 HOH HOH A .
B 2 HOH 41 2041 2041 HOH HOH A .
B 2 HOH 42 2042 2042 HOH HOH A .
B 2 HOH 43 2043 2043 HOH HOH A .
B 2 HOH 44 2044 2044 HOH HOH A .
B 2 HOH 45 2045 2045 HOH HOH A .
B 2 HOH 46 2046 2046 HOH HOH A .
B 2 HOH 47 2047 2047 HOH HOH A .
B 2 HOH 48 2048 2048 HOH HOH A .
B 2 HOH 49 2049 2049 HOH HOH A .
B 2 HOH 50 2050 2050 HOH HOH A .
B 2 HOH 51 2051 2051 HOH HOH A .
B 2 HOH 52 2052 2052 HOH HOH A .
B 2 HOH 53 2053 2053 HOH HOH A .
B 2 HOH 54 2054 2054 HOH HOH A .
B 2 HOH 55 2055 2055 HOH HOH A .
B 2 HOH 56 2056 2056 HOH HOH A .
B 2 HOH 57 2057 2057 HOH HOH A .
B 2 HOH 58 2058 2058 HOH HOH A .
B 2 HOH 59 2059 2059 HOH HOH A .
B 2 HOH 60 2060 2060 HOH HOH A .
B 2 HOH 61 2061 2061 HOH HOH A .
B 2 HOH 62 2062 2062 HOH HOH A .
B 2 HOH 63 2063 2063 HOH HOH A .
B 2 HOH 64 2064 2064 HOH HOH A .
B 2 HOH 65 2065 2065 HOH HOH A .
B 2 HOH 66 2066 2066 HOH HOH A .
B 2 HOH 67 2067 2067 HOH HOH A .
B 2 HOH 68 2068 2068 HOH HOH A .
B 2 HOH 69 2069 2069 HOH HOH A .
B 2 HOH 70 2070 2070 HOH HOH A .
B 2 HOH 71 2071 2071 HOH HOH A .
B 2 HOH 72 2072 2072 HOH HOH A .
B 2 HOH 73 2073 2073 HOH HOH A .
B 2 HOH 74 2074 2074 HOH HOH A .
B 2 HOH 75 2075 2075 HOH HOH A .
B 2 HOH 76 2076 2076 HOH HOH A .
B 2 HOH 77 2077 2077 HOH HOH A .
B 2 HOH 78 2078 2078 HOH HOH A .
B 2 HOH 79 2079 2079 HOH HOH A .
B 2 HOH 80 2080 2080 HOH HOH A .
B 2 HOH 81 2081 2081 HOH HOH A .
B 2 HOH 82 2082 2082 HOH HOH A .
B 2 HOH 83 2083 2083 HOH HOH A .
B 2 HOH 84 2084 2084 HOH HOH A .
B 2 HOH 85 2085 2085 HOH HOH A .
B 2 HOH 86 2086 2086 HOH HOH A .
B 2 HOH 87 2087 2087 HOH HOH A .
B 2 HOH 88 2088 2088 HOH HOH A .
B 2 HOH 89 2089 2089 HOH HOH A .
B 2 HOH 90 2090 2090 HOH HOH A .
B 2 HOH 91 2091 2091 HOH HOH A .
B 2 HOH 92 2092 2092 HOH HOH A .
B 2 HOH 93 2093 2093 HOH HOH A .
B 2 HOH 94 2094 2094 HOH HOH A .
B 2 HOH 95 2095 2095 HOH HOH A .
B 2 HOH 96 2096 2096 HOH HOH A .
B 2 HOH 97 2097 2097 HOH HOH A .
B 2 HOH 98 2098 2098 HOH HOH A .
B 2 HOH 99 2099 2099 HOH HOH A .
B 2 HOH 100 2100 2100 HOH HOH A .
B 2 HOH 101 2101 2101 HOH HOH A .
B 2 HOH 102 2102 2102 HOH HOH A .
B 2 HOH 103 2103 2103 HOH HOH A .
B 2 HOH 104 2104 2104 HOH HOH A .
B 2 HOH 105 2105 2105 HOH HOH A .
B 2 HOH 106 2106 2106 HOH HOH A .
B 2 HOH 107 2107 2107 HOH HOH A .
B 2 HOH 108 2108 2108 HOH HOH A .
B 2 HOH 109 2109 2109 HOH HOH A .
B 2 HOH 110 2110 2110 HOH HOH A .
B 2 HOH 111 2111 2111 HOH HOH A .
B 2 HOH 112 2112 2112 HOH HOH A .
B 2 HOH 113 2113 2113 HOH HOH A .
B 2 HOH 114 2114 2114 HOH HOH A .
B 2 HOH 115 2115 2115 HOH HOH A .
B 2 HOH 116 2116 2116 HOH HOH A .
B 2 HOH 117 2117 2117 HOH HOH A .
B 2 HOH 118 2118 2118 HOH HOH A .
B 2 HOH 119 2119 2119 HOH HOH A .
B 2 HOH 120 2120 2120 HOH HOH A .
B 2 HOH 121 2121 2121 HOH HOH A .
B 2 HOH 122 2122 2122 HOH HOH A .
B 2 HOH 123 2123 2123 HOH HOH A .
B 2 HOH 124 2124 2124 HOH HOH A .
B 2 HOH 125 2125 2125 HOH HOH A .
B 2 HOH 126 2126 2126 HOH HOH A .
B 2 HOH 127 2127 2127 HOH HOH A .
B 2 HOH 128 2128 2128 HOH HOH A .
B 2 HOH 129 2129 2129 HOH HOH A .
B 2 HOH 130 2130 2130 HOH HOH A .
B 2 HOH 131 2131 2131 HOH HOH A .
B 2 HOH 132 2132 2132 HOH HOH A .
B 2 HOH 133 2133 2133 HOH HOH A .
B 2 HOH 134 2134 2134 HOH HOH A .
B 2 HOH 135 2135 2135 HOH HOH A .
B 2 HOH 136 2136 2136 HOH HOH A .
B 2 HOH 137 2137 2137 HOH HOH A .
B 2 HOH 138 2138 2138 HOH HOH A .
B 2 HOH 139 2139 2139 HOH HOH A .
B 2 HOH 140 2140 2140 HOH HOH A .
B 2 HOH 141 2141 2141 HOH HOH A .
B 2 HOH 142 2142 2142 HOH HOH A .
B 2 HOH 143 2143 2143 HOH HOH A .
B 2 HOH 144 2144 2144 HOH HOH A .
B 2 HOH 145 2145 2145 HOH HOH A .
B 2 HOH 146 2146 2146 HOH HOH A .
B 2 HOH 147 2147 2147 HOH HOH A .
B 2 HOH 148 2148 2148 HOH HOH A .
B 2 HOH 149 2149 2149 HOH HOH A .
B 2 HOH 150 2150 2150 HOH HOH A .
B 2 HOH 151 2151 2151 HOH HOH A .
B 2 HOH 152 2152 2152 HOH HOH A .
B 2 HOH 153 2153 2153 HOH HOH A .
B 2 HOH 154 2154 2154 HOH HOH A .
B 2 HOH 155 2155 2155 HOH HOH A .
B 2 HOH 156 2156 2156 HOH HOH A .
B 2 HOH 157 2157 2157 HOH HOH A .
B 2 HOH 158 2158 2158 HOH HOH A .
B 2 HOH 159 2159 2159 HOH HOH A .
B 2 HOH 160 2160 2160 HOH HOH A .
B 2 HOH 161 2161 2161 HOH HOH A .
B 2 HOH 162 2162 2162 HOH HOH A .
B 2 HOH 163 2163 2163 HOH HOH A .
B 2 HOH 164 2164 2164 HOH HOH A .
B 2 HOH 165 2165 2165 HOH HOH A .
B 2 HOH 166 2166 2166 HOH HOH A .
B 2 HOH 167 2167 2167 HOH HOH A .
B 2 HOH 168 2168 2168 HOH HOH A .
B 2 HOH 169 2169 2169 HOH HOH A .
B 2 HOH 170 2170 2170 HOH HOH A .
B 2 HOH 171 2171 2171 HOH HOH A .
B 2 HOH 172 2172 2172 HOH HOH A .
B 2 HOH 173 2173 2173 HOH HOH A .
B 2 HOH 174 2174 2174 HOH HOH A .
B 2 HOH 175 2175 2175 HOH HOH A .
B 2 HOH 176 2176 2176 HOH HOH A .
B 2 HOH 177 2177 2177 HOH HOH A .
B 2 HOH 178 2178 2178 HOH HOH A .
B 2 HOH 179 2179 2179 HOH HOH A .
B 2 HOH 180 2180 2180 HOH HOH A .
B 2 HOH 181 2181 2181 HOH HOH A .
B 2 HOH 182 2182 2182 HOH HOH A .
B 2 HOH 183 2183 2183 HOH HOH A .
B 2 HOH 184 2184 2184 HOH HOH A .
B 2 HOH 185 2185 2185 HOH HOH A .
B 2 HOH 186 2186 2186 HOH HOH A .
B 2 HOH 187 2187 2187 HOH HOH A .
B 2 HOH 188 2188 2188 HOH HOH A .
B 2 HOH 189 2189 2189 HOH HOH A .
B 2 HOH 190 2190 2190 HOH HOH A .
B 2 HOH 191 2191 2191 HOH HOH A .
B 2 HOH 192 2192 2192 HOH HOH A .
B 2 HOH 193 2193 2193 HOH HOH A .
B 2 HOH 194 2194 2194 HOH HOH A .
B 2 HOH 195 2195 2195 HOH HOH A .
B 2 HOH 196 2196 2196 HOH HOH A .
B 2 HOH 197 2197 2197 HOH HOH A .
B 2 HOH 198 2198 2198 HOH HOH A .
B 2 HOH 199 2199 2199 HOH HOH A .
B 2 HOH 200 2200 2200 HOH HOH A .
B 2 HOH 201 2201 2201 HOH HOH A .
B 2 HOH 202 2202 2202 HOH HOH A .
B 2 HOH 203 2203 2203 HOH HOH A .
B 2 HOH 204 2204 2204 HOH HOH A .
#
loop_
_pdbx_unobs_or_zero_occ_atoms.id
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num
_pdbx_unobs_or_zero_occ_atoms.polymer_flag
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id
_pdbx_unobs_or_zero_occ_atoms.label_alt_id
_pdbx_unobs_or_zero_occ_atoms.label_asym_id
_pdbx_unobs_or_zero_occ_atoms.label_comp_id
_pdbx_unobs_or_zero_occ_atoms.label_seq_id
_pdbx_unobs_or_zero_occ_atoms.label_atom_id
1 1 Y 1 A LYS 144 ? CA ? A LYS 143 CA
2 1 Y 1 A LYS 144 ? C ? A LYS 143 C
3 1 Y 1 A LYS 144 ? O ? A LYS 143 O
4 1 Y 1 A LYS 144 ? CB ? A LYS 143 CB
5 1 Y 1 A LYS 144 ? CG ? A LYS 143 CG
6 1 Y 1 A LYS 144 ? CD ? A LYS 143 CD
7 1 Y 1 A LYS 144 ? CE ? A LYS 143 CE
8 1 Y 1 A LYS 144 ? NZ ? A LYS 143 NZ
#
loop_
_software.name
_software.classification
_software.version
_software.citation_id
_software.pdbx_ordinal
CNS refinement 0.9 ? 1
HKL-2000 'data reduction' '(DENZO)' ? 2
SCALEPACK 'data scaling' . ? 3
SOLVE phasing . ? 4
#
_cell.entry_id 1QKK
_cell.length_a 58.651
_cell.length_b 58.769
_cell.length_c 167.888
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 1QKK
_symmetry.space_group_name_H-M 'I 2 2 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 23
#
_exptl.entry_id 1QKK
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number 2
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 4.3
_exptl_crystal.density_percent_sol 71
_exptl_crystal.description
;DATA WERE COLLECTED AT BEAMLINE 17-ID (OR 17-BM) IN THE FACILITIES OF THEINDUSTRIAL MACROMOLECULAR CRYSTALLOGRAPHY ASSOCIATION COLLABORATIVE ACCESS TEAM (IMCA-CAT) AT THE ADVANCED PHOTON SOURCE.THESE FACILITIES ARE SUPPORTED BY THE COMPANIES OF THE INDUSTRIAL MACROMOLECULAR CRYSTALLOGRAPHY ASSOCIATION THROUGH A CONTRACT WITH ILLINOIS INSTITUTE OF TECHNOLOGY (IIT), EXECUTED THROUGH THE IIT'S CENTER FOR SYNCHROTRON RADIATION RESEARCH AND INSTRUMENTATION.
;
#
_exptl_crystal_grow.crystal_id 1
_exptl_crystal_grow.method ?
_exptl_crystal_grow.temp ?
_exptl_crystal_grow.temp_details ?
_exptl_crystal_grow.pH 5.60
_exptl_crystal_grow.pdbx_pH_range ?
_exptl_crystal_grow.pdbx_details '50 MM NA SUCCINATE PH 5.6, 70 MM AMMONIUM PHOSPHATE MONOBASIC, 1 MM DTT'
#
_diffrn.id 1
_diffrn.ambient_temp 100.0
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_detector.diffrn_id 1
_diffrn_detector.detector CCD
_diffrn_detector.type MARRESEARCH
_diffrn_detector.pdbx_collection_date 1998-11-27
_diffrn_detector.details 'NO FOCUSSING MIRROR'
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator 'CRYOGENICALLY COOLED SI (111) MONOCHROMATOR'
_diffrn_radiation.pdbx_diffrn_protocol MAD
_diffrn_radiation.pdbx_scattering_type x-ray
#
loop_
_diffrn_radiation_wavelength.id
_diffrn_radiation_wavelength.wavelength
_diffrn_radiation_wavelength.wt
1 0.98333 1.0
2 0.98100 1.0
3 0.98076 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source SYNCHROTRON
_diffrn_source.type 'APS BEAMLINE 17-ID'
_diffrn_source.pdbx_synchrotron_site APS
_diffrn_source.pdbx_synchrotron_beamline 17-ID
_diffrn_source.pdbx_wavelength ?
_diffrn_source.pdbx_wavelength_list '0.98333, 0.98100, 0.98076'
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 1QKK
_reflns.observed_criterion_sigma_I 2.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 20.000
_reflns.d_resolution_high 1.700
_reflns.number_obs 61207
_reflns.number_all ?
_reflns.percent_possible_obs 99.6
_reflns.pdbx_Rmerge_I_obs ?
_reflns.pdbx_Rsym_value 0.06200
_reflns.pdbx_netI_over_sigmaI 34.0000
_reflns.B_iso_Wilson_estimate 20.0
_reflns.pdbx_redundancy 8.000
#
_reflns_shell.pdbx_diffrn_id 1
_reflns_shell.pdbx_ordinal 1
_reflns_shell.d_res_high 1.70
_reflns_shell.d_res_low 1.76
_reflns_shell.percent_possible_all 100.0
_reflns_shell.Rmerge_I_obs ?
_reflns_shell.pdbx_Rsym_value 0.32400
_reflns_shell.meanI_over_sigI_obs 2.200
_reflns_shell.pdbx_redundancy 6.50
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 1QKK
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 27943
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F 0.0
_refine.pdbx_data_cutoff_high_absF 1822253.53
_refine.pdbx_data_cutoff_low_absF 0.000000
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 19.42
_refine.ls_d_res_high 1.70
_refine.ls_percent_reflns_obs 86.1
_refine.ls_R_factor_obs 0.218
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.218
_refine.ls_R_factor_R_free 0.241
_refine.ls_R_factor_R_free_error 0.005
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 9.9
_refine.ls_number_reflns_R_free 2778
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc ?
_refine.correlation_coeff_Fo_to_Fc_free ?
_refine.B_iso_mean 27.0
_refine.aniso_B[1][1] -3.27
_refine.aniso_B[2][2] 0.87
_refine.aniso_B[3][3] 2.39
_refine.aniso_B[1][2] 0.00
_refine.aniso_B[1][3] 0.00
_refine.aniso_B[2][3] 0.00
_refine.solvent_model_details 'FLAT MODEL'
_refine.solvent_model_param_ksol 0.415432
_refine.solvent_model_param_bsol 64.1063
_refine.pdbx_solvent_vdw_probe_radii ?
_refine.pdbx_solvent_ion_probe_radii ?
_refine.pdbx_solvent_shrinkage_radii ?
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details ?
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct MAD
_refine.pdbx_isotropic_thermal_model RESTRAINED
_refine.pdbx_stereochemistry_target_values ?
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R ?
_refine.pdbx_overall_ESU_R_Free ?
_refine.overall_SU_ML ?
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B ?
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_analyze.entry_id 1QKK
_refine_analyze.Luzzati_coordinate_error_obs 0.20
_refine_analyze.Luzzati_sigma_a_obs 0.02
_refine_analyze.Luzzati_d_res_low_obs 20.00
_refine_analyze.Luzzati_coordinate_error_free 0.23
_refine_analyze.Luzzati_sigma_a_free 0.01
_refine_analyze.Luzzati_d_res_low_free ?
_refine_analyze.number_disordered_residues ?
_refine_analyze.occupancy_sum_hydrogen ?
_refine_analyze.occupancy_sum_non_hydrogen ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1055
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 0
_refine_hist.number_atoms_solvent 204
_refine_hist.number_atoms_total 1259
_refine_hist.d_res_high 1.70
_refine_hist.d_res_low 19.42
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d 21.1 ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d 0.72 ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ?
c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ?
c_mcbond_it 0.94 1.50 ? ? 'X-RAY DIFFRACTION' ?
c_mcangle_it 1.49 2.00 ? ? 'X-RAY DIFFRACTION' ?
c_scbond_it 1.83 2.00 ? ? 'X-RAY DIFFRACTION' ?
c_scangle_it 2.75 2.50 ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used 6
_refine_ls_shell.d_res_high 1.70
_refine_ls_shell.d_res_low 1.81
_refine_ls_shell.number_reflns_R_work 2908
_refine_ls_shell.R_factor_R_work 0.213
_refine_ls_shell.percent_reflns_obs 60.6
_refine_ls_shell.R_factor_R_free 0.226
_refine_ls_shell.R_factor_R_free_error 0.013
_refine_ls_shell.percent_reflns_R_free 10.0
_refine_ls_shell.number_reflns_R_free 324
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
loop_
_pdbx_xplor_file.pdbx_refine_id
_pdbx_xplor_file.serial_no
_pdbx_xplor_file.param_file
_pdbx_xplor_file.topol_file
'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP
'X-RAY DIFFRACTION' 2 WATER_REP.PARAM WATER.TOP
#
_database_PDB_matrix.entry_id 1QKK
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 1QKK
_struct.title 'Crystal structure of the receiver domain and linker region of DctD from Sinorhizobium meliloti'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 1QKK
_struct_keywords.pdbx_keywords 'TRANSCRIPTIONAL REGULATORY PROTEIN'
_struct_keywords.text
;TRANSCRIPTIONAL REGULATORY PROTEIN, RECEIVER DOMAIN, 2-COMPONENT SIGNAL TRANSDUCTION, SIGMA-54 DEPENDENT TRANSCRIPTIONAL ACTIVATOR, BACTERIAL ENHANCER BINDING PROTEIN, HIGH SOLVENT CONTENT CRYSTAL
;
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
1 UNP DCTD_RHIME 1 ? ? P13632 ?
2 PDB 1QKK 1 ? ? 1QKK ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 1QKK A 1 ? 142 ? P13632 2 ? 143 ? 2 143
2 2 1QKK A 143 ? 155 ? 1QKK 144 ? 156 ? 144 156
#
loop_
_struct_ref_seq_dif.align_id
_struct_ref_seq_dif.pdbx_pdb_id_code
_struct_ref_seq_dif.mon_id
_struct_ref_seq_dif.pdbx_pdb_strand_id
_struct_ref_seq_dif.seq_num
_struct_ref_seq_dif.pdbx_pdb_ins_code
_struct_ref_seq_dif.pdbx_seq_db_name
_struct_ref_seq_dif.pdbx_seq_db_accession_code
_struct_ref_seq_dif.db_mon_id
_struct_ref_seq_dif.pdbx_seq_db_seq_num
_struct_ref_seq_dif.details
_struct_ref_seq_dif.pdbx_auth_seq_num
_struct_ref_seq_dif.pdbx_ordinal
1 1QKK GLY A 42 ? UNP P13632 GLU 43 variant 43 1
1 1QKK ARG A 67 ? UNP P13632 GLY 68 variant 68 2
1 1QKK ILE A 69 ? UNP P13632 VAL 70 variant 70 3
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PQS
_pdbx_struct_assembly.oligomeric_details dimeric
_pdbx_struct_assembly.oligomeric_count 2
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1,2
_pdbx_struct_assembly_gen.asym_id_list A,B
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 58.6510000000 0.0000000000 -1.0000000000
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000
#
_struct_biol.id 1
_struct_biol.details
;THE MOLECULE EXISTS AS A DIMER IN SOLUTION
. THE DIMER ISCOMPRISED OF MONOMERS FROM DIFFERENT
UNIT CELLS.DIMERIZATION SURFACES OCCUR AT THE
FACES OF THE UNIT CELL"BOX".
;
#
loop_
_struct_conf.conf_type_id
_struct_conf.id
_struct_conf.pdbx_PDB_helix_id
_struct_conf.beg_label_comp_id
_struct_conf.beg_label_asym_id
_struct_conf.beg_label_seq_id
_struct_conf.pdbx_beg_PDB_ins_code
_struct_conf.end_label_comp_id
_struct_conf.end_label_asym_id
_struct_conf.end_label_seq_id
_struct_conf.pdbx_end_PDB_ins_code
_struct_conf.beg_auth_comp_id
_struct_conf.beg_auth_asym_id
_struct_conf.beg_auth_seq_id
_struct_conf.end_auth_comp_id
_struct_conf.end_auth_asym_id
_struct_conf.end_auth_seq_id
_struct_conf.pdbx_PDB_helix_class
_struct_conf.details
_struct_conf.pdbx_PDB_helix_length
HELX_P HELX_P1 1 ASP A 12 ? ALA A 26 ? ASP A 13 ALA A 27 1 ? 15
HELX_P HELX_P2 2 SER A 35 ? GLY A 42 ? SER A 36 GLY A 43 1 ? 8
HELX_P HELX_P3 3 ASP A 61 ? ASP A 73 ? ASP A 62 ASP A 74 1 ? 13
HELX_P HELX_P4 4 GLY A 83 ? GLY A 85 ? GLY A 84 GLY A 86 5 ? 3
HELX_P HELX_P5 5 ASP A 86 ? ASP A 96 ? ASP A 87 ASP A 97 1 ? 11
HELX_P HELX_P6 6 ALA A 107 ? LEU A 142 ? ALA A 108 LEU A 143 1 ? 36
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
_struct_mon_prot_cis.pdbx_id 1
_struct_mon_prot_cis.label_comp_id LYS
_struct_mon_prot_cis.label_seq_id 104
_struct_mon_prot_cis.label_asym_id A
_struct_mon_prot_cis.label_alt_id .
_struct_mon_prot_cis.pdbx_PDB_ins_code ?
_struct_mon_prot_cis.auth_comp_id LYS
_struct_mon_prot_cis.auth_seq_id 105
_struct_mon_prot_cis.auth_asym_id A
_struct_mon_prot_cis.pdbx_label_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_label_seq_id_2 105
_struct_mon_prot_cis.pdbx_label_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_ins_code_2 ?
_struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO
_struct_mon_prot_cis.pdbx_auth_seq_id_2 106
_struct_mon_prot_cis.pdbx_auth_asym_id_2 A
_struct_mon_prot_cis.pdbx_PDB_model_num 1
_struct_mon_prot_cis.pdbx_omega_angle -0.22
#
_struct_sheet.id A
_struct_sheet.type ?
_struct_sheet.number_strands 5
_struct_sheet.details ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
A 1 2 ? parallel
A 2 3 ? parallel
A 3 4 ? parallel
A 4 5 ? parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
A 1 THR A 29 ? PHE A 33 ? THR A 30 PHE A 34
A 2 SER A 5 ? ILE A 9 ? SER A 6 ILE A 10
A 3 ILE A 50 ? ASP A 54 ? ILE A 51 ASP A 55
A 4 MET A 78 ? THR A 82 ? MET A 79 THR A 83
A 5 ASP A 100 ? ALA A 103 ? ASP A 101 ALA A 104
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
A 1 2 O THR A 29 ? O THR A 30 N VAL A 6 ? N VAL A 7
A 2 3 O PHE A 7 ? O PHE A 8 N ILE A 50 ? N ILE A 51
A 3 4 O VAL A 51 ? O VAL A 52 N ILE A 79 ? N ILE A 80
A 4 5 O LEU A 80 ? O LEU A 81 N ASP A 100 ? N ASP A 101
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 2192
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 2192
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 2_655
_pdbx_validate_symm_contact.dist 1.17
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id ASP
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 74
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -168.11
_pdbx_validate_torsion.psi 105.55
#
_pdbx_entry_details.entry_id 1QKK
_pdbx_entry_details.compound_details 'CHAIN A: RESIDUES 144 TO 156 ARE A HIS TAG'
_pdbx_entry_details.source_details
;THE PROTEIN IS FROM N.A. STRAIN=1021
REFERENCE: JIANG J., GU B., ALBRIGHT L.M., NIXON B.T.,
CONSERVATION BETWEEN CODING AND REGULATORY ELEMENTS OF
RHIZOBIUM MELILOTI AND RHIZOBIUM LEGUMINOSARUM DCT GENES,
J. BACTERIOL. 171:5244-5253(1989).
THE SWISSPROT ENTRY, P13632/DCTD_RHIME DESCRIBES THE
SEQUENCE FROM N.A. STRAIN=JJ1C10
REFERENCE: WATSON R.J.,
ANALYSIS OF THE C4-DICARBOXYLATE TRANSPORT GENES OF RHIZOBIUM
MELILOTI: NUCLEOTIDE SEQUENCE AND DEDUCED PRODUCTS OF DCTA,
DCTB, AND DCTD,
MOL. PLANT MICROBE INTERACT. 3:174-181(1990).
THE TWO VARIANTS DIFFER AT THE FOLLOWING RESIDUES
N.A. 1021 (THIS WORK) N.A. JJ1C10 (P13632)
SEQ: 43 GLY GLU
SEQ: 68 ARG GLY
SEQ: 70 ILE VAL
THE N-TERMINAL MET RESIDUE IS CLEAVED IN VIVO.
;
_pdbx_entry_details.nonpolymer_details ?
_pdbx_entry_details.sequence_details ?
_pdbx_entry_details.has_ligand_of_interest ?
#
loop_
_pdbx_distant_solvent_atoms.id
_pdbx_distant_solvent_atoms.PDB_model_num
_pdbx_distant_solvent_atoms.auth_atom_id
_pdbx_distant_solvent_atoms.label_alt_id
_pdbx_distant_solvent_atoms.auth_asym_id
_pdbx_distant_solvent_atoms.auth_comp_id
_pdbx_distant_solvent_atoms.auth_seq_id
_pdbx_distant_solvent_atoms.PDB_ins_code
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance
_pdbx_distant_solvent_atoms.neighbor_ligand_distance
1 1 O ? A HOH 2012 ? 6.56 .
2 1 O ? A HOH 2024 ? 7.67 .
3 1 O ? A HOH 2031 ? 7.41 .
4 1 O ? A HOH 2040 ? 6.10 .
5 1 O ? A HOH 2049 ? 7.46 .
6 1 O ? A HOH 2082 ? 6.35 .
7 1 O ? A HOH 2083 ? 7.35 .
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A SER 2 ? A SER 1
2 1 Y 1 A ALA 3 ? A ALA 2
3 1 Y 1 A ALA 4 ? A ALA 3
4 1 Y 1 A LEU 145 ? A LEU 144
5 1 Y 1 A ALA 146 ? A ALA 145
6 1 Y 1 A ALA 147 ? A ALA 146
7 1 Y 1 A ALA 148 ? A ALA 147
8 1 Y 1 A LEU 149 ? A LEU 148
9 1 Y 1 A GLU 150 ? A GLU 149
10 1 Y 1 A HIS 151 ? A HIS 150
11 1 Y 1 A HIS 152 ? A HIS 151
12 1 Y 1 A HIS 153 ? A HIS 152
13 1 Y 1 A HIS 154 ? A HIS 153
14 1 Y 1 A HIS 155 ? A HIS 154
15 1 Y 1 A HIS 156 ? A HIS 155
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
GLN N N N N 74
GLN CA C N S 75
GLN C C N N 76
GLN O O N N 77
GLN CB C N N 78
GLN CG C N N 79
GLN CD C N N 80
GLN OE1 O N N 81
GLN NE2 N N N 82
GLN OXT O N N 83
GLN H H N N 84
GLN H2 H N N 85
GLN HA H N N 86
GLN HB2 H N N 87
GLN HB3 H N N 88
GLN HG2 H N N 89
GLN HG3 H N N 90
GLN HE21 H N N 91
GLN HE22 H N N 92
GLN HXT H N N 93
GLU N N N N 94
GLU CA C N S 95
GLU C C N N 96
GLU O O N N 97
GLU CB C N N 98
GLU CG C N N 99
GLU CD C N N 100
GLU OE1 O N N 101
GLU OE2 O N N 102
GLU OXT O N N 103
GLU H H N N 104
GLU H2 H N N 105
GLU HA H N N 106
GLU HB2 H N N 107
GLU HB3 H N N 108
GLU HG2 H N N 109
GLU HG3 H N N 110
GLU HE2 H N N 111
GLU HXT H N N 112
GLY N N N N 113
GLY CA C N N 114
GLY C C N N 115
GLY O O N N 116
GLY OXT O N N 117
GLY H H N N 118
GLY H2 H N N 119
GLY HA2 H N N 120
GLY HA3 H N N 121
GLY HXT H N N 122
HIS N N N N 123
HIS CA C N S 124
HIS C C N N 125
HIS O O N N 126
HIS CB C N N 127
HIS CG C Y N 128
HIS ND1 N Y N 129
HIS CD2 C Y N 130
HIS CE1 C Y N 131
HIS NE2 N Y N 132
HIS OXT O N N 133
HIS H H N N 134
HIS H2 H N N 135
HIS HA H N N 136
HIS HB2 H N N 137
HIS HB3 H N N 138
HIS HD1 H N N 139
HIS HD2 H N N 140
HIS HE1 H N N 141
HIS HE2 H N N 142
HIS HXT H N N 143
HOH O O N N 144
HOH H1 H N N 145
HOH H2 H N N 146
ILE N N N N 147
ILE CA C N S 148
ILE C C N N 149
ILE O O N N 150
ILE CB C N S 151
ILE CG1 C N N 152
ILE CG2 C N N 153
ILE CD1 C N N 154
ILE OXT O N N 155
ILE H H N N 156
ILE H2 H N N 157
ILE HA H N N 158
ILE HB H N N 159
ILE HG12 H N N 160
ILE HG13 H N N 161
ILE HG21 H N N 162
ILE HG22 H N N 163
ILE HG23 H N N 164
ILE HD11 H N N 165
ILE HD12 H N N 166
ILE HD13 H N N 167
ILE HXT H N N 168
LEU N N N N 169
LEU CA C N S 170
LEU C C N N 171
LEU O O N N 172
LEU CB C N N 173
LEU CG C N N 174
LEU CD1 C N N 175
LEU CD2 C N N 176
LEU OXT O N N 177
LEU H H N N 178
LEU H2 H N N 179
LEU HA H N N 180
LEU HB2 H N N 181
LEU HB3 H N N 182
LEU HG H N N 183
LEU HD11 H N N 184
LEU HD12 H N N 185
LEU HD13 H N N 186
LEU HD21 H N N 187
LEU HD22 H N N 188
LEU HD23 H N N 189
LEU HXT H N N 190
LYS N N N N 191
LYS CA C N S 192
LYS C C N N 193
LYS O O N N 194
LYS CB C N N 195
LYS CG C N N 196
LYS CD C N N 197
LYS CE C N N 198
LYS NZ N N N 199
LYS OXT O N N 200
LYS H H N N 201
LYS H2 H N N 202
LYS HA H N N 203
LYS HB2 H N N 204
LYS HB3 H N N 205
LYS HG2 H N N 206
LYS HG3 H N N 207
LYS HD2 H N N 208
LYS HD3 H N N 209
LYS HE2 H N N 210
LYS HE3 H N N 211
LYS HZ1 H N N 212
LYS HZ2 H N N 213
LYS HZ3 H N N 214
LYS HXT H N N 215
MET N N N N 216
MET CA C N S 217
MET C C N N 218
MET O O N N 219
MET CB C N N 220
MET CG C N N 221
MET SD S N N 222
MET CE C N N 223
MET OXT O N N 224
MET H H N N 225
MET H2 H N N 226
MET HA H N N 227
MET HB2 H N N 228
MET HB3 H N N 229
MET HG2 H N N 230
MET HG3 H N N 231
MET HE1 H N N 232
MET HE2 H N N 233
MET HE3 H N N 234
MET HXT H N N 235
PHE N N N N 236
PHE CA C N S 237
PHE C C N N 238
PHE O O N N 239
PHE CB C N N 240
PHE CG C Y N 241
PHE CD1 C Y N 242
PHE CD2 C Y N 243
PHE CE1 C Y N 244
PHE CE2 C Y N 245
PHE CZ C Y N 246
PHE OXT O N N 247
PHE H H N N 248
PHE H2 H N N 249
PHE HA H N N 250
PHE HB2 H N N 251
PHE HB3 H N N 252
PHE HD1 H N N 253
PHE HD2 H N N 254
PHE HE1 H N N 255
PHE HE2 H N N 256
PHE HZ H N N 257
PHE HXT H N N 258
PRO N N N N 259
PRO CA C N S 260
PRO C C N N 261
PRO O O N N 262
PRO CB C N N 263
PRO CG C N N 264
PRO CD C N N 265
PRO OXT O N N 266
PRO H H N N 267
PRO HA H N N 268
PRO HB2 H N N 269
PRO HB3 H N N 270
PRO HG2 H N N 271
PRO HG3 H N N 272
PRO HD2 H N N 273
PRO HD3 H N N 274
PRO HXT H N N 275
SER N N N N 276
SER CA C N S 277
SER C C N N 278
SER O O N N 279
SER CB C N N 280
SER OG O N N 281
SER OXT O N N 282
SER H H N N 283
SER H2 H N N 284
SER HA H N N 285
SER HB2 H N N 286
SER HB3 H N N 287
SER HG H N N 288
SER HXT H N N 289
THR N N N N 290
THR CA C N S 291
THR C C N N 292
THR O O N N 293
THR CB C N R 294
THR OG1 O N N 295
THR CG2 C N N 296
THR OXT O N N 297
THR H H N N 298
THR H2 H N N 299
THR HA H N N 300
THR HB H N N 301
THR HG1 H N N 302
THR HG21 H N N 303
THR HG22 H N N 304
THR HG23 H N N 305
THR HXT H N N 306
TYR N N N N 307
TYR CA C N S 308
TYR C C N N 309
TYR O O N N 310
TYR CB C N N 311
TYR CG C Y N 312
TYR CD1 C Y N 313
TYR CD2 C Y N 314
TYR CE1 C Y N 315
TYR CE2 C Y N 316
TYR CZ C Y N 317
TYR OH O N N 318
TYR OXT O N N 319
TYR H H N N 320
TYR H2 H N N 321
TYR HA H N N 322
TYR HB2 H N N 323
TYR HB3 H N N 324
TYR HD1 H N N 325
TYR HD2 H N N 326
TYR HE1 H N N 327
TYR HE2 H N N 328
TYR HH H N N 329
TYR HXT H N N 330
VAL N N N N 331
VAL CA C N S 332
VAL C C N N 333
VAL O O N N 334
VAL CB C N N 335
VAL CG1 C N N 336
VAL CG2 C N N 337
VAL OXT O N N 338
VAL H H N N 339
VAL H2 H N N 340
VAL HA H N N 341
VAL HB H N N 342
VAL HG11 H N N 343
VAL HG12 H N N 344
VAL HG13 H N N 345
VAL HG21 H N N 346
VAL HG22 H N N 347
VAL HG23 H N N 348
VAL HXT H N N 349
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
GLN N CA sing N N 70
GLN N H sing N N 71
GLN N H2 sing N N 72
GLN CA C sing N N 73
GLN CA CB sing N N 74
GLN CA HA sing N N 75
GLN C O doub N N 76
GLN C OXT sing N N 77
GLN CB CG sing N N 78
GLN CB HB2 sing N N 79
GLN CB HB3 sing N N 80
GLN CG CD sing N N 81
GLN CG HG2 sing N N 82
GLN CG HG3 sing N N 83
GLN CD OE1 doub N N 84
GLN CD NE2 sing N N 85
GLN NE2 HE21 sing N N 86
GLN NE2 HE22 sing N N 87
GLN OXT HXT sing N N 88
GLU N CA sing N N 89
GLU N H sing N N 90
GLU N H2 sing N N 91
GLU CA C sing N N 92
GLU CA CB sing N N 93
GLU CA HA sing N N 94
GLU C O doub N N 95
GLU C OXT sing N N 96
GLU CB CG sing N N 97
GLU CB HB2 sing N N 98
GLU CB HB3 sing N N 99
GLU CG CD sing N N 100
GLU CG HG2 sing N N 101
GLU CG HG3 sing N N 102
GLU CD OE1 doub N N 103
GLU CD OE2 sing N N 104
GLU OE2 HE2 sing N N 105
GLU OXT HXT sing N N 106
GLY N CA sing N N 107
GLY N H sing N N 108
GLY N H2 sing N N 109
GLY CA C sing N N 110
GLY CA HA2 sing N N 111
GLY CA HA3 sing N N 112
GLY C O doub N N 113
GLY C OXT sing N N 114
GLY OXT HXT sing N N 115
HIS N CA sing N N 116
HIS N H sing N N 117
HIS N H2 sing N N 118
HIS CA C sing N N 119
HIS CA CB sing N N 120
HIS CA HA sing N N 121
HIS C O doub N N 122
HIS C OXT sing N N 123
HIS CB CG sing N N 124
HIS CB HB2 sing N N 125
HIS CB HB3 sing N N 126
HIS CG ND1 sing Y N 127
HIS CG CD2 doub Y N 128
HIS ND1 CE1 doub Y N 129
HIS ND1 HD1 sing N N 130
HIS CD2 NE2 sing Y N 131
HIS CD2 HD2 sing N N 132
HIS CE1 NE2 sing Y N 133
HIS CE1 HE1 sing N N 134
HIS NE2 HE2 sing N N 135
HIS OXT HXT sing N N 136
HOH O H1 sing N N 137
HOH O H2 sing N N 138
ILE N CA sing N N 139
ILE N H sing N N 140
ILE N H2 sing N N 141
ILE CA C sing N N 142
ILE CA CB sing N N 143
ILE CA HA sing N N 144
ILE C O doub N N 145
ILE C OXT sing N N 146
ILE CB CG1 sing N N 147
ILE CB CG2 sing N N 148
ILE CB HB sing N N 149
ILE CG1 CD1 sing N N 150
ILE CG1 HG12 sing N N 151
ILE CG1 HG13 sing N N 152
ILE CG2 HG21 sing N N 153
ILE CG2 HG22 sing N N 154
ILE CG2 HG23 sing N N 155
ILE CD1 HD11 sing N N 156
ILE CD1 HD12 sing N N 157
ILE CD1 HD13 sing N N 158
ILE OXT HXT sing N N 159
LEU N CA sing N N 160
LEU N H sing N N 161
LEU N H2 sing N N 162
LEU CA C sing N N 163
LEU CA CB sing N N 164
LEU CA HA sing N N 165
LEU C O doub N N 166
LEU C OXT sing N N 167
LEU CB CG sing N N 168
LEU CB HB2 sing N N 169
LEU CB HB3 sing N N 170
LEU CG CD1 sing N N 171
LEU CG CD2 sing N N 172
LEU CG HG sing N N 173
LEU CD1 HD11 sing N N 174
LEU CD1 HD12 sing N N 175
LEU CD1 HD13 sing N N 176
LEU CD2 HD21 sing N N 177
LEU CD2 HD22 sing N N 178
LEU CD2 HD23 sing N N 179
LEU OXT HXT sing N N 180
LYS N CA sing N N 181
LYS N H sing N N 182
LYS N H2 sing N N 183
LYS CA C sing N N 184
LYS CA CB sing N N 185
LYS CA HA sing N N 186
LYS C O doub N N 187
LYS C OXT sing N N 188
LYS CB CG sing N N 189
LYS CB HB2 sing N N 190
LYS CB HB3 sing N N 191
LYS CG CD sing N N 192
LYS CG HG2 sing N N 193
LYS CG HG3 sing N N 194
LYS CD CE sing N N 195
LYS CD HD2 sing N N 196
LYS CD HD3 sing N N 197
LYS CE NZ sing N N 198
LYS CE HE2 sing N N 199
LYS CE HE3 sing N N 200
LYS NZ HZ1 sing N N 201
LYS NZ HZ2 sing N N 202
LYS NZ HZ3 sing N N 203
LYS OXT HXT sing N N 204
MET N CA sing N N 205
MET N H sing N N 206
MET N H2 sing N N 207
MET CA C sing N N 208
MET CA CB sing N N 209
MET CA HA sing N N 210
MET C O doub N N 211
MET C OXT sing N N 212
MET CB CG sing N N 213
MET CB HB2 sing N N 214
MET CB HB3 sing N N 215
MET CG SD sing N N 216
MET CG HG2 sing N N 217
MET CG HG3 sing N N 218
MET SD CE sing N N 219
MET CE HE1 sing N N 220
MET CE HE2 sing N N 221
MET CE HE3 sing N N 222
MET OXT HXT sing N N 223
PHE N CA sing N N 224
PHE N H sing N N 225
PHE N H2 sing N N 226
PHE CA C sing N N 227
PHE CA CB sing N N 228
PHE CA HA sing N N 229
PHE C O doub N N 230
PHE C OXT sing N N 231
PHE CB CG sing N N 232
PHE CB HB2 sing N N 233
PHE CB HB3 sing N N 234
PHE CG CD1 doub Y N 235
PHE CG CD2 sing Y N 236
PHE CD1 CE1 sing Y N 237
PHE CD1 HD1 sing N N 238
PHE CD2 CE2 doub Y N 239
PHE CD2 HD2 sing N N 240
PHE CE1 CZ doub Y N 241
PHE CE1 HE1 sing N N 242
PHE CE2 CZ sing Y N 243
PHE CE2 HE2 sing N N 244
PHE CZ HZ sing N N 245
PHE OXT HXT sing N N 246
PRO N CA sing N N 247
PRO N CD sing N N 248
PRO N H sing N N 249
PRO CA C sing N N 250
PRO CA CB sing N N 251
PRO CA HA sing N N 252
PRO C O doub N N 253
PRO C OXT sing N N 254
PRO CB CG sing N N 255
PRO CB HB2 sing N N 256
PRO CB HB3 sing N N 257
PRO CG CD sing N N 258
PRO CG HG2 sing N N 259
PRO CG HG3 sing N N 260
PRO CD HD2 sing N N 261
PRO CD HD3 sing N N 262
PRO OXT HXT sing N N 263
SER N CA sing N N 264
SER N H sing N N 265
SER N H2 sing N N 266
SER CA C sing N N 267
SER CA CB sing N N 268
SER CA HA sing N N 269
SER C O doub N N 270
SER C OXT sing N N 271
SER CB OG sing N N 272
SER CB HB2 sing N N 273
SER CB HB3 sing N N 274
SER OG HG sing N N 275
SER OXT HXT sing N N 276
THR N CA sing N N 277
THR N H sing N N 278
THR N H2 sing N N 279
THR CA C sing N N 280
THR CA CB sing N N 281
THR CA HA sing N N 282
THR C O doub N N 283
THR C OXT sing N N 284
THR CB OG1 sing N N 285
THR CB CG2 sing N N 286
THR CB HB sing N N 287
THR OG1 HG1 sing N N 288
THR CG2 HG21 sing N N 289
THR CG2 HG22 sing N N 290
THR CG2 HG23 sing N N 291
THR OXT HXT sing N N 292
TYR N CA sing N N 293
TYR N H sing N N 294
TYR N H2 sing N N 295
TYR CA C sing N N 296
TYR CA CB sing N N 297
TYR CA HA sing N N 298
TYR C O doub N N 299
TYR C OXT sing N N 300
TYR CB CG sing N N 301
TYR CB HB2 sing N N 302
TYR CB HB3 sing N N 303
TYR CG CD1 doub Y N 304
TYR CG CD2 sing Y N 305
TYR CD1 CE1 sing Y N 306
TYR CD1 HD1 sing N N 307
TYR CD2 CE2 doub Y N 308
TYR CD2 HD2 sing N N 309
TYR CE1 CZ doub Y N 310
TYR CE1 HE1 sing N N 311
TYR CE2 CZ sing Y N 312
TYR CE2 HE2 sing N N 313
TYR CZ OH sing N N 314
TYR OH HH sing N N 315
TYR OXT HXT sing N N 316
VAL N CA sing N N 317
VAL N H sing N N 318
VAL N H2 sing N N 319
VAL CA C sing N N 320
VAL CA CB sing N N 321
VAL CA HA sing N N 322
VAL C O doub N N 323
VAL C OXT sing N N 324
VAL CB CG1 sing N N 325
VAL CB CG2 sing N N 326
VAL CB HB sing N N 327
VAL CG1 HG11 sing N N 328
VAL CG1 HG12 sing N N 329
VAL CG1 HG13 sing N N 330
VAL CG2 HG21 sing N N 331
VAL CG2 HG22 sing N N 332
VAL CG2 HG23 sing N N 333
VAL OXT HXT sing N N 334
#
_atom_sites.entry_id 1QKK
_atom_sites.fract_transf_matrix[1][1] 0.017050
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.017016
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.005956
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
N
O
S
#
loop_